Record Information |
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Version | 5.0 |
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Status | Detected and Quantified |
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Creation Date | 2005-11-16 15:48:42 UTC |
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Update Date | 2022-09-22 17:43:42 UTC |
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HMDB ID | HMDB0000387 |
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Secondary Accession Numbers | |
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Metabolite Identification |
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Common Name | 3-Hydroxydodecanoic acid |
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Description | 3-Hydroxydodecanoic acid (CAS: 1883-13-2) is a medium-chain fatty acid associated with fatty acid metabolic disorders (PMID: 11948802 ). Deficiency of medium-chain acyl-CoA dehydrogenase is characterized by an intolerance to prolonged fasting, recurrent episodes of hypoglycemic coma with medium-chain dicarboxylic aciduria, impaired ketogenesis, and low plasma and tissue carnitine levels (OMIM: 201450 ). 3-Hydroxydodecanoic acid is also a microbial metabolite found in Acinetobacter, Moraxella, and Pseudomonas (PMID: 21687748 ). 3-Hydroxydodecanoic acid has been identified in the human placenta (PMID: 32033212 ). |
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Structure | InChI=1S/C12H24O3/c1-2-3-4-5-6-7-8-9-11(13)10-12(14)15/h11,13H,2-10H2,1H3,(H,14,15)/t11-/m0/s1 |
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Synonyms | Value | Source |
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(S)-3-Hydroxydodecanoic acid | ChEBI | (S)-3-OH Dodecanoic acid | ChEBI | (S)-3-OH Lauric acid | ChEBI | (S)-beta-Hydroxydodecanoic acid | ChEBI | (S)-beta-Hydroxylauric acid | ChEBI | (S)-beta-OH Dodecanoic acid | ChEBI | (S)-beta-OH Lauric acid | ChEBI | (S)-3-Hydroxydodecanoate | Generator | (S)-3-OH Dodecanoate | Generator | (S)-3-OH Laate | Generator | (S)-3-OH Laic acid | Generator | (S)-b-Hydroxydodecanoate | Generator | (S)-b-Hydroxydodecanoic acid | Generator | (S)-beta-Hydroxydodecanoate | Generator | (S)-Β-hydroxydodecanoate | Generator | (S)-Β-hydroxydodecanoic acid | Generator | (S)-b-Hydroxylaate | Generator | (S)-b-Hydroxylaic acid | Generator | (S)-beta-Hydroxylaate | Generator | (S)-beta-Hydroxylaic acid | Generator | (S)-Β-hydroxylaate | Generator | (S)-Β-hydroxylaic acid | Generator | (S)-b-OH Dodecanoate | Generator | (S)-b-OH Dodecanoic acid | Generator | (S)-beta-OH Dodecanoate | Generator | (S)-Β-OH dodecanoate | Generator | (S)-Β-OH dodecanoic acid | Generator | (S)-b-OH Laate | Generator | (S)-b-OH Laic acid | Generator | (S)-beta-OH Laate | Generator | (S)-beta-OH Laic acid | Generator | (S)-Β-OH laate | Generator | (S)-Β-OH laic acid | Generator | 3-Hydroxydodecanoate | Generator | (S)-3-Hydroxylaate | HMDB | (S)-3-Hydroxylaic acid | HMDB | (3S)-3-Hydroxydodecanoate | HMDB | (3S)-3-Hydroxydodecanoic acid | HMDB | (±)-3-hydroxydodecanoate | HMDB | (±)-3-hydroxydodecanoic acid | HMDB | 3-Hydroxylaurate | HMDB | 3-Hydroxylauric acid | HMDB | DL-beta-Hydroxydodecanoate | HMDB | DL-beta-Hydroxydodecanoic acid | HMDB | DL-Β-hydroxydodecanoate | HMDB | DL-Β-hydroxydodecanoic acid | HMDB | FA(12:0(3-OH)) | HMDB | FA(12:0(3S-OH)) | HMDB | L-3-Hydroxydodecanoate | HMDB | L-3-Hydroxydodecanoic acid | HMDB | beta-Hydroxydodecanoate | HMDB | beta-Hydroxydodecanoic acid | HMDB | beta-Hydroxylaurate | HMDB | beta-Hydroxylauric acid | HMDB | Β-hydroxydodecanoate | HMDB | Β-hydroxydodecanoic acid | HMDB | Β-hydroxylaurate | HMDB | Β-hydroxylauric acid | HMDB | 3-Hydroxydodecanoic acid | HMDB |
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Chemical Formula | C12H24O3 |
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Average Molecular Weight | 216.321 |
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Monoisotopic Molecular Weight | 216.172544633 |
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IUPAC Name | (3S)-3-hydroxydodecanoic acid |
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Traditional Name | (S)-3-hydroxylauric acid |
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CAS Registry Number | 45162-48-9 |
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SMILES | CCCCCCCCC[C@H](O)CC(O)=O |
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InChI Identifier | InChI=1S/C12H24O3/c1-2-3-4-5-6-7-8-9-11(13)10-12(14)15/h11,13H,2-10H2,1H3,(H,14,15)/t11-/m0/s1 |
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InChI Key | MUCMKTPAZLSKTL-NSHDSACASA-N |
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Chemical Taxonomy |
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Description | Belongs to the class of organic compounds known as medium-chain hydroxy acids and derivatives. These are hydroxy acids with a 6 to 12 carbon atoms long side chain. |
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Kingdom | Organic compounds |
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Super Class | Organic acids and derivatives |
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Class | Hydroxy acids and derivatives |
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Sub Class | Medium-chain hydroxy acids and derivatives |
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Direct Parent | Medium-chain hydroxy acids and derivatives |
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Alternative Parents | |
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Substituents | - Medium-chain hydroxy acid
- Medium-chain fatty acid
- Beta-hydroxy acid
- Hydroxy fatty acid
- Fatty acyl
- Fatty acid
- Secondary alcohol
- Carboxylic acid derivative
- Carboxylic acid
- Monocarboxylic acid or derivatives
- Organic oxide
- Alcohol
- Carbonyl group
- Hydrocarbon derivative
- Organic oxygen compound
- Organooxygen compound
- Aliphatic acyclic compound
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Molecular Framework | Aliphatic acyclic compounds |
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External Descriptors | |
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Ontology |
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Physiological effect | |
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Disposition | |
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Process | |
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Role | |
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Physical Properties |
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State | Solid |
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Experimental Molecular Properties | Property | Value | Reference |
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Melting Point | Not Available | Not Available | Boiling Point | Not Available | Not Available | Water Solubility | Not Available | Not Available | LogP | Not Available | Not Available |
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Experimental Chromatographic Properties | Not Available |
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Predicted Molecular Properties | |
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Predicted Chromatographic Properties | Predicted Collision Cross SectionsPredicted Kovats Retention IndicesUnderivatizedDerivatizedDerivative Name / Structure | SMILES | Kovats RI Value | Column Type | Reference |
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3-Hydroxydodecanoic acid,1TMS,isomer #1 | CCCCCCCCC[C@@H](CC(=O)O)O[Si](C)(C)C | 1780.9 | Semi standard non polar | 33892256 | 3-Hydroxydodecanoic acid,1TMS,isomer #2 | CCCCCCCCC[C@H](O)CC(=O)O[Si](C)(C)C | 1767.4 | Semi standard non polar | 33892256 | 3-Hydroxydodecanoic acid,2TMS,isomer #1 | CCCCCCCCC[C@@H](CC(=O)O[Si](C)(C)C)O[Si](C)(C)C | 1855.5 | Semi standard non polar | 33892256 | 3-Hydroxydodecanoic acid,1TBDMS,isomer #1 | CCCCCCCCC[C@@H](CC(=O)O)O[Si](C)(C)C(C)(C)C | 2007.2 | Semi standard non polar | 33892256 | 3-Hydroxydodecanoic acid,1TBDMS,isomer #2 | CCCCCCCCC[C@H](O)CC(=O)O[Si](C)(C)C(C)(C)C | 2000.8 | Semi standard non polar | 33892256 | 3-Hydroxydodecanoic acid,2TBDMS,isomer #1 | CCCCCCCCC[C@@H](CC(=O)O[Si](C)(C)C(C)(C)C)O[Si](C)(C)C(C)(C)C | 2314.9 | Semi standard non polar | 33892256 |
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Spectra |
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| GC-MS SpectraSpectrum Type | Description | Splash Key | Deposition Date | Source | View |
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Experimental GC-MS | GC-MS Spectrum - 3-Hydroxydodecanoic acid GC-MS (2 TMS) | splash10-001i-5930000000-267beffaa56f4c3885ab | 2019-10-24 | HMDB team, MONA, MassBank | View Spectrum | Experimental GC-MS | GC-MS Spectrum - 3-Hydroxydodecanoic acid GC-MS (Non-derivatized) | splash10-001i-5930000000-267beffaa56f4c3885ab | 2019-10-24 | HMDB team, MONA, MassBank | View Spectrum | Predicted GC-MS | Predicted GC-MS Spectrum - 3-Hydroxydodecanoic acid GC-MS (Non-derivatized) - 70eV, Positive | Not Available | 2021-10-12 | Wishart Lab | View Spectrum | Predicted GC-MS | Predicted GC-MS Spectrum - 3-Hydroxydodecanoic acid GC-MS (Non-derivatized) - 70eV, Positive | Not Available | 2021-10-12 | Wishart Lab | View Spectrum | Predicted GC-MS | Predicted GC-MS Spectrum - 3-Hydroxydodecanoic acid GC-MS (TMS_1_1) - 70eV, Positive | Not Available | 2021-11-05 | Wishart Lab | View Spectrum | Predicted GC-MS | Predicted GC-MS Spectrum - 3-Hydroxydodecanoic acid GC-MS (TMS_1_2) - 70eV, Positive | Not Available | 2021-11-05 | Wishart Lab | View Spectrum | Predicted GC-MS | Predicted GC-MS Spectrum - 3-Hydroxydodecanoic acid GC-MS (TMS_2_1) - 70eV, Positive | Not Available | 2021-11-05 | Wishart Lab | View Spectrum | Predicted GC-MS | Predicted GC-MS Spectrum - 3-Hydroxydodecanoic acid GC-MS (TBDMS_1_1) - 70eV, Positive | Not Available | 2021-11-05 | Wishart Lab | View Spectrum | Predicted GC-MS | Predicted GC-MS Spectrum - 3-Hydroxydodecanoic acid GC-MS (TBDMS_1_2) - 70eV, Positive | Not Available | 2021-11-05 | Wishart Lab | View Spectrum | Predicted GC-MS | Predicted GC-MS Spectrum - 3-Hydroxydodecanoic acid GC-MS (TBDMS_2_1) - 70eV, Positive | Not Available | 2021-11-05 | Wishart Lab | View Spectrum |
MS/MS SpectraSpectrum Type | Description | Splash Key | Deposition Date | Source | View |
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Experimental LC-MS/MS | LC-MS/MS Spectrum - 3-Hydroxydodecanoic acid Quattro_QQQ 10V, Negative-QTOF (Annotated) | splash10-0aor-9050000000-f8825f9349ee9a2ec34e | 2019-10-24 | HMDB team, MONA | View Spectrum | Experimental LC-MS/MS | LC-MS/MS Spectrum - 3-Hydroxydodecanoic acid Quattro_QQQ 25V, Negative-QTOF (Annotated) | splash10-0a4i-9000000000-3d142f4358076fbe5192 | 2019-10-24 | HMDB team, MONA | View Spectrum | Experimental LC-MS/MS | LC-MS/MS Spectrum - 3-Hydroxydodecanoic acid Quattro_QQQ 40V, Negative-QTOF (Annotated) | splash10-0a4i-9000000000-54e9a813b1c73a4dee86 | 2019-10-24 | HMDB team, MONA | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - 3-Hydroxydodecanoic acid 10V, Positive-QTOF | splash10-014i-9640000000-6ae3522b4ab714ac01d9 | 2021-09-23 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - 3-Hydroxydodecanoic acid 20V, Positive-QTOF | splash10-0ab9-9000000000-f44f1941ba69e47860fb | 2021-09-23 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - 3-Hydroxydodecanoic acid 40V, Positive-QTOF | splash10-0a4l-9000000000-7aa76d51356623cc325f | 2021-09-23 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - 3-Hydroxydodecanoic acid 10V, Negative-QTOF | splash10-066r-7090000000-c136666cfe0af2c7d044 | 2021-09-24 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - 3-Hydroxydodecanoic acid 20V, Negative-QTOF | splash10-0a4i-9000000000-918089033fd82836fb6f | 2021-09-24 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - 3-Hydroxydodecanoic acid 40V, Negative-QTOF | splash10-0006-9000000000-efd0e0c3d7b6aa45f62c | 2021-09-24 | Wishart Lab | View Spectrum |
NMR SpectraSpectrum Type | Description | Deposition Date | Source | View |
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Experimental 1D NMR | 1H NMR Spectrum (1D, 500 MHz, H2O, experimental) | 2019-10-24 | Wishart Lab | View Spectrum | Experimental 2D NMR | [1H, 13C]-HSQC NMR Spectrum (2D, 600 MHz, 5%_DMSO, experimental) | 2019-10-24 | Wishart Lab | View Spectrum |
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Biological Properties |
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Cellular Locations | - Extracellular
- Membrane (predicted from logP)
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Biospecimen Locations | |
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Tissue Locations | |
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Pathways | |
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Normal Concentrations |
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Blood | Detected and Quantified | 0.3 (0.2-0.6) uM | Adult (>18 years old) | Both | Normal | | details | Blood | Detected and Quantified | 0.4 (0.2-1.4) uM | Not Available | Not Available | Normal | | details | Feces | Detected but not Quantified | Not Quantified | Adult (>18 years old) | Both | Normal | | details | Feces | Detected but not Quantified | Not Quantified | Adult (>18 years old) | Both | Normal | | details | Feces | Detected but not Quantified | Not Quantified | Adult (>18 years old) | Both | Normal | | details |
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Abnormal Concentrations |
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Blood | Detected and Quantified | 0.4 (0.2-1.4) uM | Adult (>18 years old) | Both | Fatty Acid Oxidation disorder with supplementation of MCT formula | | details | Feces | Detected but not Quantified | Not Quantified | Adult (>18 years old) | Both | Nonalcoholic fatty liver disease (NAFLD) | | details | Urine | Detected but not Quantified | Not Quantified | Not Specified | Not Specified | Cancer patients undergoing total body irradiation | | details |
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Associated Disorders and Diseases |
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Disease References | Fatty Acid Oxidation disorder |
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- Jones PM, Quinn R, Fennessey PV, Tjoa S, Goodman SI, Fiore S, Burlina AB, Rinaldo P, Boriack RL, Bennett MJ: Improved stable isotope dilution-gas chromatography-mass spectrometry method for serum or plasma free 3-hydroxy-fatty acids and its utility for the study of disorders of mitochondrial fatty acid beta-oxidation. Clin Chem. 2000 Feb;46(2):149-55. [PubMed:10657369 ]
| Nonalcoholic fatty liver disease |
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- Raman M, Ahmed I, Gillevet PM, Probert CS, Ratcliffe NM, Smith S, Greenwood R, Sikaroodi M, Lam V, Crotty P, Bailey J, Myers RP, Rioux KP: Fecal microbiome and volatile organic compound metabolome in obese humans with nonalcoholic fatty liver disease. Clin Gastroenterol Hepatol. 2013 Jul;11(7):868-75.e1-3. doi: 10.1016/j.cgh.2013.02.015. Epub 2013 Feb 27. [PubMed:23454028 ]
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Associated OMIM IDs | None |
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External Links |
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DrugBank ID | Not Available |
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Phenol Explorer Compound ID | Not Available |
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FooDB ID | FDB022005 |
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KNApSAcK ID | Not Available |
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Chemspider ID | 4472230 |
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KEGG Compound ID | Not Available |
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BioCyc ID | Not Available |
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BiGG ID | Not Available |
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Wikipedia Link | Not Available |
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METLIN ID | 5376 |
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PubChem Compound | 5312805 |
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PDB ID | Not Available |
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ChEBI ID | 36210 |
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Food Biomarker Ontology | Not Available |
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VMH ID | Not Available |
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MarkerDB ID | Not Available |
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Good Scents ID | Not Available |
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References |
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Synthesis Reference | Iwata, Tsutomu; Iwamoto, Osamu; Sugiyama, Haruhiko. Process for preparing b-hydroxy fatty acid. Eur. Pat. Appl. (1990), 6 pp. |
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Material Safety Data Sheet (MSDS) | Download (PDF) |
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General References | - Chickos JS, Way BA, Wilson J, Shaharuzzaman M, Laird J, Landt M: Analysis of 3-hydroxydodecanedioic acid for studies of fatty acid metabolic disorders: preparation of stable isotope standards. J Clin Lab Anal. 2002;16(2):115-20. [PubMed:11948802 ]
- Jones PM, Quinn R, Fennessey PV, Tjoa S, Goodman SI, Fiore S, Burlina AB, Rinaldo P, Boriack RL, Bennett MJ: Improved stable isotope dilution-gas chromatography-mass spectrometry method for serum or plasma free 3-hydroxy-fatty acids and its utility for the study of disorders of mitochondrial fatty acid beta-oxidation. Clin Chem. 2000 Feb;46(2):149-55. [PubMed:10657369 ]
- Jones PM, Moffitt M, Joseph D, Harthcock PA, Boriack RL, Ibdah JA, Strauss AW, Bennett MJ: Accumulation of free 3-hydroxy fatty acids in the culture media of fibroblasts from patients deficient in long-chain l-3-hydroxyacyl-CoA dehydrogenase: a useful diagnostic aid. Clin Chem. 2001;47(7):1190-4. [PubMed:11427448 ]
- Ktsoyan ZA, Beloborodova NV, Sedrakyan AM, Osipov GA, Khachatryan ZA, Kelly D, Manukyan GP, Arakelova KA, Hovhannisyan AI, Olenin AY, Arakelyan AA, Ghazaryan KA, Aminov RI: Profiles of Microbial Fatty Acids in the Human Metabolome are Disease-Specific. Front Microbiol. 2011 Jan 20;1:148. doi: 10.3389/fmicb.2010.00148. eCollection 2010. [PubMed:21687748 ]
- Elshenawy S, Pinney SE, Stuart T, Doulias PT, Zura G, Parry S, Elovitz MA, Bennett MJ, Bansal A, Strauss JF 3rd, Ischiropoulos H, Simmons RA: The Metabolomic Signature of the Placenta in Spontaneous Preterm Birth. Int J Mol Sci. 2020 Feb 4;21(3). pii: ijms21031043. doi: 10.3390/ijms21031043. [PubMed:32033212 ]
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