Hmdb loader
Record Information
Version5.0
StatusDetected and Quantified
Creation Date2005-11-16 15:48:42 UTC
Update Date2023-02-21 17:15:47 UTC
HMDB IDHMDB0001544
Secondary Accession Numbers
  • HMDB01544
Metabolite Identification
Common Namem-Chlorobenzoic acid
Descriptionm-Chlorobenzoic acid, also known as m-chlorobenzoate, belongs to the class of organic compounds known as halobenzoic acids. These are benzoic acids carrying a halogen atom on the benzene ring. m-Chlorobenzoic acid is a secondary metabolite. Secondary metabolites are metabolically or physiologically non-essential metabolites that may serve a role as defense or signalling molecules. In some cases they are simply molecules that arise from the incomplete metabolism of other secondary metabolites. Based on a literature review a significant number of articles have been published on m-Chlorobenzoic acid.
Structure
Data?1676999747
Synonyms
ValueSource
m-ChlorobenzoateGenerator
3-cholro-BenzoateHMDB
3-cholro-Benzoic acidHMDB
3-ChlorobenzoateMeSH, Generator, HMDB
Meta-chlorobenzoateMeSH, HMDB
m-Chlorobenzoic acidChEBI
Chemical FormulaC7H5ClO2
Average Molecular Weight156.566
Monoisotopic Molecular Weight155.997807111
IUPAC Name3-chlorobenzoic acid
Traditional Name3-chlorobenzoic acid
CAS Registry Number535-80-8
SMILES
OC(=O)C1=CC(Cl)=CC=C1
InChI Identifier
InChI=1S/C7H5ClO2/c8-6-3-1-2-5(4-6)7(9)10/h1-4H,(H,9,10)
InChI KeyLULAYUGMBFYYEX-UHFFFAOYSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as halobenzoic acids. These are benzoic acids carrying a halogen atom on the benzene ring.
KingdomOrganic compounds
Super ClassBenzenoids
ClassBenzene and substituted derivatives
Sub ClassBenzoic acids and derivatives
Direct ParentHalobenzoic acids
Alternative Parents
Substituents
  • 3-halobenzoic acid or derivatives
  • 3-halobenzoic acid
  • Halobenzoic acid
  • Benzoic acid
  • Benzoyl
  • Halobenzene
  • Chlorobenzene
  • Aryl halide
  • Aryl chloride
  • Monocarboxylic acid or derivatives
  • Carboxylic acid
  • Carboxylic acid derivative
  • Organic oxide
  • Organooxygen compound
  • Organochloride
  • Organohalogen compound
  • Organic oxygen compound
  • Hydrocarbon derivative
  • Aromatic homomonocyclic compound
Molecular FrameworkAromatic homomonocyclic compounds
External Descriptors
Ontology
Physiological effectNot Available
Disposition
ProcessNot Available
RoleNot Available
Physical Properties
StateSolid
Experimental Molecular Properties
PropertyValueReference
Melting Point158 °CNot Available
Boiling PointNot AvailableNot Available
Water Solubility0.45 mg/mLNot Available
LogP2.68HANSCH,C ET AL. (1995)
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
Water Solubility0.82 g/LALOGPS
logP2.24ALOGPS
logP2.23ChemAxon
logS-2.3ALOGPS
pKa (Strongest Acidic)3.9ChemAxon
Physiological Charge-1ChemAxon
Hydrogen Acceptor Count2ChemAxon
Hydrogen Donor Count1ChemAxon
Polar Surface Area37.3 ŲChemAxon
Rotatable Bond Count1ChemAxon
Refractivity38.12 m³·mol⁻¹ChemAxon
Polarizability14.21 ųChemAxon
Number of Rings1ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterNoChemAxon
Veber's RuleYesChemAxon
MDDR-like RuleNoChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
AllCCS[M+H]+130.12532859911
AllCCS[M-H]-123.53332859911
DeepCCS[M+H]+129.58330932474
DeepCCS[M-H]-126.5330932474
DeepCCS[M-2H]-163.4530932474
DeepCCS[M+Na]+138.88830932474
AllCCS[M+H]+130.132859911
AllCCS[M+H-H2O]+125.532859911
AllCCS[M+NH4]+134.432859911
AllCCS[M+Na]+135.632859911
AllCCS[M-H]-123.532859911
AllCCS[M+Na-2H]-125.132859911
AllCCS[M+HCOO]-126.932859911

Predicted Kovats Retention Indices

Underivatized

MetaboliteSMILESKovats RI ValueColumn TypeReference
m-Chlorobenzoic acidOC(=O)C1=CC(Cl)=CC=C12532.4Standard polar33892256
m-Chlorobenzoic acidOC(=O)C1=CC(Cl)=CC=C11279.9Standard non polar33892256
m-Chlorobenzoic acidOC(=O)C1=CC(Cl)=CC=C11365.1Semi standard non polar33892256

Derivatized

Derivative Name / StructureSMILESKovats RI ValueColumn TypeReference
m-Chlorobenzoic acid,1TMS,isomer #1C[Si](C)(C)OC(=O)C1=CC=CC(Cl)=C11420.4Semi standard non polar33892256
m-Chlorobenzoic acid,1TBDMS,isomer #1CC(C)(C)[Si](C)(C)OC(=O)C1=CC=CC(Cl)=C11664.5Semi standard non polar33892256
Spectra

GC-MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Experimental GC-MSGC-MS Spectrum - m-Chlorobenzoic acid EI-B (Non-derivatized)splash10-0bti-3900000000-ff604323020f2ae9a71a2017-09-12HMDB team, MONA, MassBankView Spectrum
Experimental GC-MSGC-MS Spectrum - m-Chlorobenzoic acid EI-B (Non-derivatized)splash10-0bti-3900000000-ff604323020f2ae9a71a2018-05-18HMDB team, MONA, MassBankView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - m-Chlorobenzoic acid GC-MS (Non-derivatized) - 70eV, Positivesplash10-052r-5900000000-d7df670a2ca1ca0e6e8b2017-09-01Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - m-Chlorobenzoic acid GC-MS (1 TMS) - 70eV, Positivesplash10-00dr-8930000000-d4bb8e6c4f3c2af4dd812017-10-06Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - m-Chlorobenzoic acid GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - m-Chlorobenzoic acid GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Experimental LC-MS/MSLC-MS/MS Spectrum - m-Chlorobenzoic acid Quattro_QQQ 10V, Positive-QTOF (Annotated)splash10-004i-9000000000-445ad7a7cdf351ff61af2012-07-24HMDB team, MONAView Spectrum
Experimental LC-MS/MSLC-MS/MS Spectrum - m-Chlorobenzoic acid Quattro_QQQ 25V, Positive-QTOF (Annotated)splash10-004i-9000000000-3a8c49b4b8a48ab543642012-07-24HMDB team, MONAView Spectrum
Experimental LC-MS/MSLC-MS/MS Spectrum - m-Chlorobenzoic acid Quattro_QQQ 40V, Positive-QTOF (Annotated)splash10-03fr-9000000000-9e820074b36c867c67902012-07-24HMDB team, MONAView Spectrum
Experimental LC-MS/MSLC-MS/MS Spectrum - m-Chlorobenzoic acid EI-B (HITACHI RMU-7M) , Positive-QTOFsplash10-0bti-3900000000-08061cef88de8dd947412012-08-31HMDB team, MONAView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - m-Chlorobenzoic acid 10V, Positive-QTOFsplash10-0a4r-0900000000-19a9589b2da08d5c712c2017-09-01Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - m-Chlorobenzoic acid 20V, Positive-QTOFsplash10-000i-0900000000-779650a357b7177298722017-09-01Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - m-Chlorobenzoic acid 40V, Positive-QTOFsplash10-000i-4900000000-e741e953fcd220ab45e02017-09-01Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - m-Chlorobenzoic acid 10V, Negative-QTOFsplash10-0udi-0900000000-e35c168db0e23b06b9b82017-09-01Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - m-Chlorobenzoic acid 20V, Negative-QTOFsplash10-0ik9-0900000000-34b7504f5418ea0a5c652017-09-01Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - m-Chlorobenzoic acid 40V, Negative-QTOFsplash10-03di-3900000000-485387f98cf0e9c284082017-09-01Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - m-Chlorobenzoic acid 10V, Positive-QTOFsplash10-0a4i-0900000000-ed331c989bf8dc7e5dfd2021-09-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - m-Chlorobenzoic acid 20V, Positive-QTOFsplash10-06ri-0900000000-afab0724f44016f61f772021-09-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - m-Chlorobenzoic acid 40V, Positive-QTOFsplash10-03di-1900000000-fefbbbe412c8ccb18fba2021-09-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - m-Chlorobenzoic acid 10V, Negative-QTOFsplash10-0ik9-0900000000-15b6500b96dcb86e73412021-09-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - m-Chlorobenzoic acid 20V, Negative-QTOFsplash10-03di-0900000000-3a016b344c2a3a8250f42021-09-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - m-Chlorobenzoic acid 40V, Negative-QTOFsplash10-01q9-9500000000-8319f229c1634e19e9d12021-09-24Wishart LabView Spectrum

NMR Spectra

Spectrum TypeDescriptionDeposition DateSourceView
Experimental 2D NMR[1H, 13C]-HSQC NMR Spectrum (2D, 600 MHz, H2O, experimental)2012-12-05Wishart LabView Spectrum

IR Spectra

Spectrum TypeDescriptionDeposition DateSourceView
Predicted IR SpectrumIR Ion Spectrum (Predicted IRIS Spectrum, Adduct: [M-H]-)2023-02-03FELIX labView Spectrum
Predicted IR SpectrumIR Ion Spectrum (Predicted IRIS Spectrum, Adduct: [M+H]+)2023-02-03FELIX labView Spectrum
Predicted IR SpectrumIR Ion Spectrum (Predicted IRIS Spectrum, Adduct: [M+Na]+)2023-02-03FELIX labView Spectrum
Biological Properties
Cellular Locations
  • Membrane (predicted from logP)
Biospecimen Locations
  • Urine
Tissue LocationsNot Available
Pathways
Normal Concentrations
BiospecimenStatusValueAgeSexConditionReferenceDetails
UrineDetected but not QuantifiedNot QuantifiedAdult (>18 years old)Both
Normal
details
UrineDetected and Quantified0.68 umol/mmol creatinineAdult (>18 years old)Both
Normal
details
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDFDB022682
KNApSAcK IDC00052343
Chemspider ID434
KEGG Compound IDNot Available
BioCyc IDCPD-3486
BiGG IDNot Available
Wikipedia LinkChlorobenzoic acid
METLIN ID6311
PubChem Compound447
PDB IDNot Available
ChEBI ID49410
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDNot Available
References
Synthesis ReferenceWu, Wenliang; Zhu, Xurong; Zhu, Ningdong; Chen, Mingde. Methods for preparation of m-chlorobenzoic acid. Nanjing Huagong Daxue Xuebao (1997), 19(4), 117-124.
Material Safety Data Sheet (MSDS)Download (PDF)
General References
  1. Welch RM, Lai AA, Schroeder DH: Pharmacological significance of the species differences in bupropion metabolism. Xenobiotica. 1987 Mar;17(3):287-98. [PubMed:3107223 ]