Hmdb loader
Record Information
Version5.0
StatusDetected but not Quantified
Creation Date2007-04-12 20:15:36 UTC
Update Date2023-02-21 17:17:12 UTC
HMDB IDHMDB0006009
Secondary Accession Numbers
  • HMDB06009
Metabolite Identification
Common NameIsoputreanine
DescriptionIsoputreanine belongs to the class of organic compounds known as gamma amino acids and derivatives. These are amino acids having a (-NH2) group attached to the gamma carbon atom. Isoputreanine has been detected, but not quantified in, a few different foods, such as anatidaes (Anatidae), chickens (Gallus gallus), and domestic pigs (Sus scrofa domestica). This could make isoputreanine a potential biomarker for the consumption of these foods. Based on a literature review very few articles have been published on Isoputreanine.
Structure
Data?1676999832
Synonyms
ValueSource
4-((3-Aminopropyl)amino)-butanoateHMDB
4-((3-Aminopropyl)amino)-butanoic acidHMDB
IPuHMDB
N-(3-Aminopropyl)-4-aminobutanoateHMDB
N-(3-Aminopropyl)-4-aminobutanoic acidHMDB
N-(3-Aminopropyl)-4-aminobutyrateHMDB
N-(3-Aminopropyl)-4-aminobutyric acidHMDB
N-(4-Carboxybutyl)-1,3-diaminopropaneHMDB
N-(4-Carboxybutyl)-1,3-propanediamineHMDB
Isoputreanine dihydrochlorideMeSH, HMDB
4-[(3-Aminopropyl)amino]butanoateGenerator, HMDB
IsoputreanineMeSH
Chemical FormulaC7H16N2O2
Average Molecular Weight160.2141
Monoisotopic Molecular Weight160.121177766
IUPAC Name4-[(3-aminopropyl)amino]butanoic acid
Traditional Name4-[(3-aminopropyl)amino]butanoic acid
CAS Registry Number66165-33-1
SMILES
NCCCNCCCC(O)=O
InChI Identifier
InChI=1S/C7H16N2O2/c8-4-2-6-9-5-1-3-7(10)11/h9H,1-6,8H2,(H,10,11)
InChI KeyJUBNBYBUFCFLHB-UHFFFAOYSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as gamma amino acids and derivatives. These are amino acids having a (-NH2) group attached to the gamma carbon atom.
KingdomOrganic compounds
Super ClassOrganic acids and derivatives
ClassCarboxylic acids and derivatives
Sub ClassAmino acids, peptides, and analogues
Direct ParentGamma amino acids and derivatives
Alternative Parents
Substituents
  • Gamma amino acid or derivatives
  • Amino fatty acid
  • Fatty acyl
  • Fatty acid
  • Straight chain fatty acid
  • Amino acid
  • Carboxylic acid
  • Secondary aliphatic amine
  • Monocarboxylic acid or derivatives
  • Secondary amine
  • Amine
  • Primary amine
  • Organooxygen compound
  • Organonitrogen compound
  • Hydrocarbon derivative
  • Primary aliphatic amine
  • Organic oxide
  • Organopnictogen compound
  • Organic oxygen compound
  • Carbonyl group
  • Organic nitrogen compound
  • Aliphatic acyclic compound
Molecular FrameworkAliphatic acyclic compounds
External DescriptorsNot Available
Ontology
Physiological effectNot Available
Disposition
ProcessNot Available
RoleNot Available
Physical Properties
StateSolid
Experimental Molecular Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
Water Solubility11.9 g/LALOGPS
logP-2.6ALOGPS
logP-3.4ChemAxon
logS-1.1ALOGPS
pKa (Strongest Acidic)4.61ChemAxon
pKa (Strongest Basic)10.84ChemAxon
Physiological Charge1ChemAxon
Hydrogen Acceptor Count4ChemAxon
Hydrogen Donor Count3ChemAxon
Polar Surface Area75.35 ŲChemAxon
Rotatable Bond Count7ChemAxon
Refractivity43.05 m³·mol⁻¹ChemAxon
Polarizability18.33 ųChemAxon
Number of Rings0ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DarkChem[M+H]+136.3531661259
DarkChem[M-H]-132.10831661259
DeepCCS[M+H]+138.730932474
DeepCCS[M-H]-135.75430932474
DeepCCS[M-2H]-172.34630932474
DeepCCS[M+Na]+147.51230932474
AllCCS[M+H]+135.732859911
AllCCS[M+H-H2O]+132.032859911
AllCCS[M+NH4]+139.232859911
AllCCS[M+Na]+140.232859911
AllCCS[M-H]-137.332859911
AllCCS[M+Na-2H]-139.332859911
AllCCS[M+HCOO]-141.632859911

Predicted Kovats Retention Indices

Underivatized

MetaboliteSMILESKovats RI ValueColumn TypeReference
IsoputreanineNCCCNCCCC(O)=O2468.7Standard polar33892256
IsoputreanineNCCCNCCCC(O)=O1644.2Standard non polar33892256
IsoputreanineNCCCNCCCC(O)=O1504.5Semi standard non polar33892256

Derivatized

Derivative Name / StructureSMILESKovats RI ValueColumn TypeReference
Isoputreanine,1TMS,isomer #1C[Si](C)(C)OC(=O)CCCNCCCN1602.5Semi standard non polar33892256
Isoputreanine,1TMS,isomer #2C[Si](C)(C)NCCCNCCCC(=O)O1718.7Semi standard non polar33892256
Isoputreanine,1TMS,isomer #3C[Si](C)(C)N(CCCN)CCCC(=O)O1717.6Semi standard non polar33892256
Isoputreanine,2TMS,isomer #1C[Si](C)(C)NCCCNCCCC(=O)O[Si](C)(C)C1770.3Semi standard non polar33892256
Isoputreanine,2TMS,isomer #1C[Si](C)(C)NCCCNCCCC(=O)O[Si](C)(C)C1896.8Standard non polar33892256
Isoputreanine,2TMS,isomer #1C[Si](C)(C)NCCCNCCCC(=O)O[Si](C)(C)C2045.4Standard polar33892256
Isoputreanine,2TMS,isomer #2C[Si](C)(C)OC(=O)CCCN(CCCN)[Si](C)(C)C1710.2Semi standard non polar33892256
Isoputreanine,2TMS,isomer #2C[Si](C)(C)OC(=O)CCCN(CCCN)[Si](C)(C)C1793.9Standard non polar33892256
Isoputreanine,2TMS,isomer #2C[Si](C)(C)OC(=O)CCCN(CCCN)[Si](C)(C)C2465.0Standard polar33892256
Isoputreanine,2TMS,isomer #3C[Si](C)(C)N(CCCNCCCC(=O)O)[Si](C)(C)C1932.9Semi standard non polar33892256
Isoputreanine,2TMS,isomer #3C[Si](C)(C)N(CCCNCCCC(=O)O)[Si](C)(C)C1881.4Standard non polar33892256
Isoputreanine,2TMS,isomer #3C[Si](C)(C)N(CCCNCCCC(=O)O)[Si](C)(C)C2291.0Standard polar33892256
Isoputreanine,2TMS,isomer #4C[Si](C)(C)NCCCN(CCCC(=O)O)[Si](C)(C)C1880.5Semi standard non polar33892256
Isoputreanine,2TMS,isomer #4C[Si](C)(C)NCCCN(CCCC(=O)O)[Si](C)(C)C1865.3Standard non polar33892256
Isoputreanine,2TMS,isomer #4C[Si](C)(C)NCCCN(CCCC(=O)O)[Si](C)(C)C2269.3Standard polar33892256
Isoputreanine,3TMS,isomer #1C[Si](C)(C)OC(=O)CCCNCCCN([Si](C)(C)C)[Si](C)(C)C1973.8Semi standard non polar33892256
Isoputreanine,3TMS,isomer #1C[Si](C)(C)OC(=O)CCCNCCCN([Si](C)(C)C)[Si](C)(C)C1978.8Standard non polar33892256
Isoputreanine,3TMS,isomer #1C[Si](C)(C)OC(=O)CCCNCCCN([Si](C)(C)C)[Si](C)(C)C1959.1Standard polar33892256
Isoputreanine,3TMS,isomer #2C[Si](C)(C)NCCCN(CCCC(=O)O[Si](C)(C)C)[Si](C)(C)C1844.1Semi standard non polar33892256
Isoputreanine,3TMS,isomer #2C[Si](C)(C)NCCCN(CCCC(=O)O[Si](C)(C)C)[Si](C)(C)C1971.5Standard non polar33892256
Isoputreanine,3TMS,isomer #2C[Si](C)(C)NCCCN(CCCC(=O)O[Si](C)(C)C)[Si](C)(C)C1985.3Standard polar33892256
Isoputreanine,3TMS,isomer #3C[Si](C)(C)N(CCCC(=O)O)CCCN([Si](C)(C)C)[Si](C)(C)C2102.3Semi standard non polar33892256
Isoputreanine,3TMS,isomer #3C[Si](C)(C)N(CCCC(=O)O)CCCN([Si](C)(C)C)[Si](C)(C)C2019.8Standard non polar33892256
Isoputreanine,3TMS,isomer #3C[Si](C)(C)N(CCCC(=O)O)CCCN([Si](C)(C)C)[Si](C)(C)C2164.6Standard polar33892256
Isoputreanine,4TMS,isomer #1C[Si](C)(C)OC(=O)CCCN(CCCN([Si](C)(C)C)[Si](C)(C)C)[Si](C)(C)C2094.6Semi standard non polar33892256
Isoputreanine,4TMS,isomer #1C[Si](C)(C)OC(=O)CCCN(CCCN([Si](C)(C)C)[Si](C)(C)C)[Si](C)(C)C2079.6Standard non polar33892256
Isoputreanine,4TMS,isomer #1C[Si](C)(C)OC(=O)CCCN(CCCN([Si](C)(C)C)[Si](C)(C)C)[Si](C)(C)C1939.6Standard polar33892256
Isoputreanine,1TBDMS,isomer #1CC(C)(C)[Si](C)(C)OC(=O)CCCNCCCN1836.5Semi standard non polar33892256
Isoputreanine,1TBDMS,isomer #2CC(C)(C)[Si](C)(C)NCCCNCCCC(=O)O1961.6Semi standard non polar33892256
Isoputreanine,1TBDMS,isomer #3CC(C)(C)[Si](C)(C)N(CCCN)CCCC(=O)O1949.3Semi standard non polar33892256
Isoputreanine,2TBDMS,isomer #1CC(C)(C)[Si](C)(C)NCCCNCCCC(=O)O[Si](C)(C)C(C)(C)C2242.0Semi standard non polar33892256
Isoputreanine,2TBDMS,isomer #1CC(C)(C)[Si](C)(C)NCCCNCCCC(=O)O[Si](C)(C)C(C)(C)C2247.7Standard non polar33892256
Isoputreanine,2TBDMS,isomer #1CC(C)(C)[Si](C)(C)NCCCNCCCC(=O)O[Si](C)(C)C(C)(C)C2207.5Standard polar33892256
Isoputreanine,2TBDMS,isomer #2CC(C)(C)[Si](C)(C)OC(=O)CCCN(CCCN)[Si](C)(C)C(C)(C)C2209.6Semi standard non polar33892256
Isoputreanine,2TBDMS,isomer #2CC(C)(C)[Si](C)(C)OC(=O)CCCN(CCCN)[Si](C)(C)C(C)(C)C2173.7Standard non polar33892256
Isoputreanine,2TBDMS,isomer #2CC(C)(C)[Si](C)(C)OC(=O)CCCN(CCCN)[Si](C)(C)C(C)(C)C2473.1Standard polar33892256
Isoputreanine,2TBDMS,isomer #3CC(C)(C)[Si](C)(C)N(CCCNCCCC(=O)O)[Si](C)(C)C(C)(C)C2359.3Semi standard non polar33892256
Isoputreanine,2TBDMS,isomer #3CC(C)(C)[Si](C)(C)N(CCCNCCCC(=O)O)[Si](C)(C)C(C)(C)C2268.0Standard non polar33892256
Isoputreanine,2TBDMS,isomer #3CC(C)(C)[Si](C)(C)N(CCCNCCCC(=O)O)[Si](C)(C)C(C)(C)C2359.5Standard polar33892256
Isoputreanine,2TBDMS,isomer #4CC(C)(C)[Si](C)(C)NCCCN(CCCC(=O)O)[Si](C)(C)C(C)(C)C2371.9Semi standard non polar33892256
Isoputreanine,2TBDMS,isomer #4CC(C)(C)[Si](C)(C)NCCCN(CCCC(=O)O)[Si](C)(C)C(C)(C)C2244.8Standard non polar33892256
Isoputreanine,2TBDMS,isomer #4CC(C)(C)[Si](C)(C)NCCCN(CCCC(=O)O)[Si](C)(C)C(C)(C)C2375.3Standard polar33892256
Isoputreanine,3TBDMS,isomer #1CC(C)(C)[Si](C)(C)OC(=O)CCCNCCCN([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C2635.3Semi standard non polar33892256
Isoputreanine,3TBDMS,isomer #1CC(C)(C)[Si](C)(C)OC(=O)CCCNCCCN([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C2540.2Standard non polar33892256
Isoputreanine,3TBDMS,isomer #1CC(C)(C)[Si](C)(C)OC(=O)CCCNCCCN([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C2274.2Standard polar33892256
Isoputreanine,3TBDMS,isomer #2CC(C)(C)[Si](C)(C)NCCCN(CCCC(=O)O[Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C2572.9Semi standard non polar33892256
Isoputreanine,3TBDMS,isomer #2CC(C)(C)[Si](C)(C)NCCCN(CCCC(=O)O[Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C2499.4Standard non polar33892256
Isoputreanine,3TBDMS,isomer #2CC(C)(C)[Si](C)(C)NCCCN(CCCC(=O)O[Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C2320.8Standard polar33892256
Isoputreanine,3TBDMS,isomer #3CC(C)(C)[Si](C)(C)N(CCCC(=O)O)CCCN([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C2727.1Semi standard non polar33892256
Isoputreanine,3TBDMS,isomer #3CC(C)(C)[Si](C)(C)N(CCCC(=O)O)CCCN([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C2553.5Standard non polar33892256
Isoputreanine,3TBDMS,isomer #3CC(C)(C)[Si](C)(C)N(CCCC(=O)O)CCCN([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C2420.4Standard polar33892256
Isoputreanine,4TBDMS,isomer #1CC(C)(C)[Si](C)(C)OC(=O)CCCN(CCCN([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C2951.6Semi standard non polar33892256
Isoputreanine,4TBDMS,isomer #1CC(C)(C)[Si](C)(C)OC(=O)CCCN(CCCN([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C2768.5Standard non polar33892256
Isoputreanine,4TBDMS,isomer #1CC(C)(C)[Si](C)(C)OC(=O)CCCN(CCCN([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C2369.9Standard polar33892256
Spectra

GC-MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted GC-MSPredicted GC-MS Spectrum - Isoputreanine GC-MS (Non-derivatized) - 70eV, Positivesplash10-0543-9100000000-5de1f1825ea135d646c02017-09-01Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Isoputreanine GC-MS (1 TMS) - 70eV, Positivesplash10-0019-9200000000-942787fa252389132cbf2017-10-06Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Isoputreanine GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Isoputreanine 10V, Positive-QTOFsplash10-0006-0900000000-3769e0f0ae649bd0ccb82017-09-01Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Isoputreanine 20V, Positive-QTOFsplash10-0006-9500000000-b4a22c61328c9eb31afc2017-09-01Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Isoputreanine 40V, Positive-QTOFsplash10-052f-9000000000-44ad0a6822000dd383a02017-09-01Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Isoputreanine 10V, Negative-QTOFsplash10-0a4i-0900000000-f9d96fd9a35ca2da89542017-09-01Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Isoputreanine 20V, Negative-QTOFsplash10-0aou-1900000000-5f2d6488f52e54cba7652017-09-01Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Isoputreanine 40V, Negative-QTOFsplash10-0abc-9100000000-bd66cc05e7edb395794c2017-09-01Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Isoputreanine 10V, Negative-QTOFsplash10-0a4i-0900000000-7266ca4b3bc8f9efa7e62021-09-23Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Isoputreanine 20V, Negative-QTOFsplash10-0a4i-1900000000-17207ecca84cfc03acfa2021-09-23Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Isoputreanine 40V, Negative-QTOFsplash10-001i-9000000000-48258f112e2c2886f87c2021-09-23Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Isoputreanine 10V, Positive-QTOFsplash10-01pc-9700000000-dbfedbf1e3758aed0ad42021-09-25Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Isoputreanine 20V, Positive-QTOFsplash10-00ku-9200000000-7378c37ffd5c01a952ba2021-09-25Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Isoputreanine 40V, Positive-QTOFsplash10-052f-9000000000-9c115ae28731b78b2b972021-09-25Wishart LabView Spectrum

NMR Spectra

Spectrum TypeDescriptionDeposition DateSourceView
Predicted 1D NMR13C NMR Spectrum (1D, 100 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 100 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 1000 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 1000 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 200 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 200 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 300 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 300 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 400 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 400 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 500 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 500 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 600 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 600 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 700 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 700 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 800 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 800 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 900 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 900 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum

IR Spectra

Spectrum TypeDescriptionDeposition DateSourceView
Predicted IR SpectrumIR Ion Spectrum (Predicted IRIS Spectrum, Adduct: [M-H]-)2023-02-03FELIX labView Spectrum
Predicted IR SpectrumIR Ion Spectrum (Predicted IRIS Spectrum, Adduct: [M+H]+)2023-02-03FELIX labView Spectrum
Predicted IR SpectrumIR Ion Spectrum (Predicted IRIS Spectrum, Adduct: [M+Na]+)2023-02-03FELIX labView Spectrum
Biological Properties
Cellular LocationsNot Available
Biospecimen Locations
  • Blood
  • Urine
Tissue LocationsNot Available
Pathways
Normal Concentrations
Not Available
Abnormal Concentrations
BiospecimenStatusValueAgeSexConditionReferenceDetails
BloodExpected but not QuantifiedNot QuantifiedAdult (>18 years old)BothAsthma details
UrineDetected but not QuantifiedNot QuantifiedAdult (>18 years old)BothAsthma details
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDFDB023800
KNApSAcK IDNot Available
Chemspider ID150153
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound171763
PDB IDNot Available
ChEBI IDNot Available
Food Biomarker OntologyNot Available
VMH IDCE1941
MarkerDB IDNot Available
Good Scents IDNot Available
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General ReferencesNot Available