Jump To Section:

Identification Taxonomy Ontology Physical properties Spectra Biological properties Concentrations Links References XML

Record Information

Version

5.0

Status

Expected but not Quantified

Creation Date

2009-07-25 00:11:18 UTC

Update Date

2021-09-14 15:15:57 UTC

HMDB ID

HMDB0012996

Secondary Accession Numbers

HMDB12996

Metabolite Identification

Common Name

Lipoyllysine

Description

lipollysine is an important lipoic acid derivative. Most alpha-lipoic acid in food is derived from lipoamide-containing enzymes and is bound to the amino acid, lysine (lipoyllysine). Animal tissues that are rich in lipoyllysine include kidney, heart, and liver, while plant sources that are rich in lipoyllysine include spinach, broccoli, and tomatoes. Somewhat lower amounts of lipoyllysine have been measured in peas, brussel sprouts, and rice bran. Lipoic acid can be found in many common foods such as potatoes, carrots, broccoli, yeasts, beets, yams, and red meat. Dietary sources of ALA include flaxseeds, flaxseed oil, canola (rapeseed) oil, soybeans and soybean oil, pumpkin seeds and pumpkin seed oil, purslane, perilla seed oil, walnuts and walnut oil. The best food sources of lipoic acid are believed to be those foods rich in mitochondria - red meat (skeletal muscle, heart, liver, kidney). Other sources are yeast, spinach, and broccoli. Lypoyllysine is involved in Lipoate metabolism pathway where lipoyllysine is undergo hydrolysis to produce liporate and l-lysine.

Structure

MOL 3D MOL SDF 3D SDF PDB 3D PDB SMILES InChI

HMDB0012996
     RDKit          3D
Lipoyllysine
 47 47  0  0  0  0  0  0  0  0999 V2000
    6.2744    1.2190    0.6712 N   0  0  0  0  0  0  0  0  0  0  0  0
    5.2304    0.1875    0.7807 C   0  0  2  0  0  0  0  0  0  0  0  0
    4.6650   -0.0105   -0.6022 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5909   -1.0473   -0.6249 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.0896   -1.2205   -2.0524 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.5357    0.0899   -2.5395 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4640    0.5136   -1.6856 N   0  0  0  0  0  0  0  0  0  0  0  0
    0.3071   -0.2688   -1.5417 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.1462   -1.3578   -2.1414 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7799    0.2299   -0.6264 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9281   -0.7661   -0.6200 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.9899   -0.1919    0.3288 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.1780   -1.0810    0.4252 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.1940   -0.5408    1.3466 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.7167    0.8055    0.9281 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.6472    1.2950    2.0382 C   0  0  0  0  0  0  0  0  0  0  0  0
   -8.0287    0.0852    1.8739 S   0  0  0  0  0  0  0  0  0  0  0  0
   -6.7331   -1.5613    1.3212 S   0  0  0  0  0  0  0  0  0  0  0  0
    4.2046    0.6514    1.7256 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.2817    1.8325    2.1687 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.1523   -0.1246    2.1684 O   0  0  0  0  0  0  0  0  0  0  0  0
    6.0999    1.7937   -0.1610 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.1817    0.7235    0.5511 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.6924   -0.7662    1.0861 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.4819   -0.2680   -1.3054 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.2845    0.9880   -0.9224 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.0044   -2.0219   -0.3177 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.7360   -0.7274    0.0260 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.3332   -1.9975   -2.1115 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.9769   -1.4611   -2.7138 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.3226    0.8755   -2.6703 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.1263   -0.1018   -3.5652 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.5591    1.4352   -1.1594 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1132    1.2315   -0.9347 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3246    0.3238    0.3793 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3404   -0.8389   -1.6446 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5861   -1.7570   -0.2673 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.2918    0.8094   -0.0346 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5396   -0.0497    1.3309 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.8093   -2.0533    0.8727 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.5643   -1.3270   -0.5865 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.7806   -0.5184    2.3757 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.9642    1.5601    0.7065 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.3894    0.6513    0.0413 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.1333    1.1789    2.9927 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.9615    2.3010    1.7749 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.2528   -0.7720    2.9147 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  1  0
  3  4  1  0
  4  5  1  0
  5  6  1  0
  6  7  1  0
  7  8  1  0
  8  9  2  0
  8 10  1  0
 10 11  1  0
 11 12  1  0
 12 13  1  0
 13 14  1  0
 14 15  1  0
 15 16  1  0
 16 17  1  0
 17 18  1  0
  2 19  1  0
 19 20  2  0
 19 21  1  0
 18 14  1  0
  1 22  1  0
  1 23  1  0
  2 24  1  1
  3 25  1  0
  3 26  1  0
  4 27  1  0
  4 28  1  0
  5 29  1  0
  5 30  1  0
  6 31  1  0
  6 32  1  0
  7 33  1  0
 10 34  1  0
 10 35  1  0
 11 36  1  0
 11 37  1  0
 12 38  1  0
 12 39  1  0
 13 40  1  0
 13 41  1  0
 14 42  1  0
 15 43  1  0
 15 44  1  0
 16 45  1  0
 16 46  1  0
 21 47  1  0
M  END

  Mrv1652303102016482D          

 21 21  0  0  1  0            999 V2000
    8.8172  -16.0079    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    9.4303  -15.4559    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
   10.2149  -15.7108    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   10.8281  -15.1588    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   11.6127  -15.4138    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   12.2258  -14.8617    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   13.0104  -15.1166    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
   13.6235  -14.5646    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   14.4081  -14.8196    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   13.4519  -13.7576    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   12.6673  -13.5027    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   12.4958  -12.6957    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   11.7112  -12.4408    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   11.5397  -11.6338    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   10.7860  -11.2982    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   10.8722  -10.4778    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   11.6792  -10.3063    0.0000 S   0  0  0  0  0  0  0  0  0  0  0  0
   12.0917  -11.0207    0.0000 S   0  0  0  0  0  0  0  0  0  0  0  0
    9.2588  -14.6489    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.8719  -14.0969    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    8.4742  -14.3940    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  2  1  1  1  0  0  0
  2  3  1  0  0  0  0
  2 19  1  0  0  0  0
  3  4  1  0  0  0  0
  4  5  1  0  0  0  0
  5  6  1  0  0  0  0
  6  7  1  0  0  0  0
  7  8  1  0  0  0  0
  8  9  2  0  0  0  0
  8 10  1  0  0  0  0
 10 11  1  0  0  0  0
 11 12  1  0  0  0  0
 12 13  1  0  0  0  0
 13 14  1  0  0  0  0
 14 15  1  0  0  0  0
 14 18  1  0  0  0  0
 15 16  1  0  0  0  0
 16 17  1  0  0  0  0
 17 18  1  0  0  0  0
 19 20  1  0  0  0  0
 19 21  2  0  0  0  0
M  END
> <DATABASE_ID>
HMDB0012996

> <DATABASE_NAME>
hmdb

> <SMILES>
N[C@H](CCCCNC(=O)CCCCC1CCSS1)C(O)=O

> <INCHI_IDENTIFIER>
InChI=1S/C14H26N2O3S2/c15-12(14(18)19)6-3-4-9-16-13(17)7-2-1-5-11-8-10-20-21-11/h11-12H,1-10,15H2,(H,16,17)(H,18,19)/t11?,12-/m1/s1

> <INCHI_KEY>
COTIXRRJLCSLLS-PIJUOVFKSA-N

> <FORMULA>
C14H26N2O3S2

> <MOLECULAR_WEIGHT>
334.498

> <EXACT_MASS>
334.138484088

> <JCHEM_ACCEPTOR_COUNT>
4

> <JCHEM_ATOM_COUNT>
47

> <JCHEM_AVERAGE_POLARIZABILITY>
36.78029032523753

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
3

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
0

> <JCHEM_IUPAC>
(2R)-2-amino-6-[5-(1,2-dithiolan-3-yl)pentanamido]hexanoic acid

> <ALOGPS_LOGP>
-0.02

> <JCHEM_LOGP>
-0.8170249658909206

> <ALOGPS_LOGS>
-3.55

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
1

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA>
15.876709047638645

> <JCHEM_PKA_STRONGEST_ACIDIC>
2.2426573474053453

> <JCHEM_PKA_STRONGEST_BASIC>
9.52653029055576

> <JCHEM_POLAR_SURFACE_AREA>
92.41999999999999

> <JCHEM_REFRACTIVITY>
88.98099999999998

> <JCHEM_ROTATABLE_BOND_COUNT>
11

> <JCHEM_RULE_OF_FIVE>
1

> <ALOGPS_SOLUBILITY>
9.49e-02 g/l

> <JCHEM_TRADITIONAL_IUPAC>
(2R)-2-amino-6-[5-(1,2-dithiolan-3-yl)pentanamido]hexanoic acid

> <JCHEM_VEBER_RULE>
0

$$$$

HMDB0012996
     RDKit          3D
Lipoyllysine
 47 47  0  0  0  0  0  0  0  0999 V2000
    6.2744    1.2190    0.6712 N   0  0  0  0  0  0  0  0  0  0  0  0
    5.2304    0.1875    0.7807 C   0  0  2  0  0  0  0  0  0  0  0  0
    4.6650   -0.0105   -0.6022 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5909   -1.0473   -0.6249 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.0896   -1.2205   -2.0524 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.5357    0.0899   -2.5395 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4640    0.5136   -1.6856 N   0  0  0  0  0  0  0  0  0  0  0  0
    0.3071   -0.2688   -1.5417 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.1462   -1.3578   -2.1414 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7799    0.2299   -0.6264 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9281   -0.7661   -0.6200 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.9899   -0.1919    0.3288 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.1780   -1.0810    0.4252 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.1940   -0.5408    1.3466 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.7167    0.8055    0.9281 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.6472    1.2950    2.0382 C   0  0  0  0  0  0  0  0  0  0  0  0
   -8.0287    0.0852    1.8739 S   0  0  0  0  0  0  0  0  0  0  0  0
   -6.7331   -1.5613    1.3212 S   0  0  0  0  0  0  0  0  0  0  0  0
    4.2046    0.6514    1.7256 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.2817    1.8325    2.1687 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.1523   -0.1246    2.1684 O   0  0  0  0  0  0  0  0  0  0  0  0
    6.0999    1.7937   -0.1610 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.1817    0.7235    0.5511 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.6924   -0.7662    1.0861 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.4819   -0.2680   -1.3054 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.2845    0.9880   -0.9224 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.0044   -2.0219   -0.3177 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.7360   -0.7274    0.0260 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.3332   -1.9975   -2.1115 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.9769   -1.4611   -2.7138 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.3226    0.8755   -2.6703 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.1263   -0.1018   -3.5652 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.5591    1.4352   -1.1594 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1132    1.2315   -0.9347 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3246    0.3238    0.3793 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3404   -0.8389   -1.6446 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5861   -1.7570   -0.2673 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.2918    0.8094   -0.0346 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5396   -0.0497    1.3309 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.8093   -2.0533    0.8727 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.5643   -1.3270   -0.5865 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.7806   -0.5184    2.3757 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.9642    1.5601    0.7065 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.3894    0.6513    0.0413 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.1333    1.1789    2.9927 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.9615    2.3010    1.7749 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.2528   -0.7720    2.9147 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  1  0
  3  4  1  0
  4  5  1  0
  5  6  1  0
  6  7  1  0
  7  8  1  0
  8  9  2  0
  8 10  1  0
 10 11  1  0
 11 12  1  0
 12 13  1  0
 13 14  1  0
 14 15  1  0
 15 16  1  0
 16 17  1  0
 17 18  1  0
  2 19  1  0
 19 20  2  0
 19 21  1  0
 18 14  1  0
  1 22  1  0
  1 23  1  0
  2 24  1  1
  3 25  1  0
  3 26  1  0
  4 27  1  0
  4 28  1  0
  5 29  1  0
  5 30  1  0
  6 31  1  0
  6 32  1  0
  7 33  1  0
 10 34  1  0
 10 35  1  0
 11 36  1  0
 11 37  1  0
 12 38  1  0
 12 39  1  0
 13 40  1  0
 13 41  1  0
 14 42  1  0
 15 43  1  0
 15 44  1  0
 16 45  1  0
 16 46  1  0
 21 47  1  0
M  END

HEADER    PROTEIN                                 10-MAR-20   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   10-MAR-20         0                                  
HETATM    1  N   UNK     0      16.459 -29.881   0.000  0.00  0.00           N+0
HETATM    2  C   UNK     0      17.603 -28.851   0.000  0.00  0.00           C+0
HETATM    3  C   UNK     0      19.068 -29.327   0.000  0.00  0.00           C+0
HETATM    4  C   UNK     0      20.212 -28.296   0.000  0.00  0.00           C+0
HETATM    5  C   UNK     0      21.677 -28.772   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0      22.821 -27.742   0.000  0.00  0.00           C+0
HETATM    7  N   UNK     0      24.286 -28.218   0.000  0.00  0.00           N+0
HETATM    8  C   UNK     0      25.431 -27.187   0.000  0.00  0.00           C+0
HETATM    9  O   UNK     0      26.895 -27.663   0.000  0.00  0.00           O+0
HETATM   10  C   UNK     0      25.110 -25.681   0.000  0.00  0.00           C+0
HETATM   11  C   UNK     0      23.646 -25.205   0.000  0.00  0.00           C+0
HETATM   12  C   UNK     0      23.325 -23.699   0.000  0.00  0.00           C+0
HETATM   13  C   UNK     0      21.861 -23.223   0.000  0.00  0.00           C+0
HETATM   14  C   UNK     0      21.541 -21.716   0.000  0.00  0.00           C+0
HETATM   15  C   UNK     0      20.134 -21.090   0.000  0.00  0.00           C+0
HETATM   16  C   UNK     0      20.295 -19.559   0.000  0.00  0.00           C+0
HETATM   17  S   UNK     0      21.801 -19.238   0.000  0.00  0.00           S+0
HETATM   18  S   UNK     0      22.571 -20.572   0.000  0.00  0.00           S+0
HETATM   19  C   UNK     0      17.283 -27.345   0.000  0.00  0.00           C+0
HETATM   20  O   UNK     0      18.428 -26.314   0.000  0.00  0.00           O+0
HETATM   21  O   UNK     0      15.819 -26.869   0.000  0.00  0.00           O+0
CONECT    1    2                                                            
CONECT    2    1    3   19                                                  
CONECT    3    2    4                                                       
CONECT    4    3    5                                                       
CONECT    5    4    6                                                       
CONECT    6    5    7                                                       
CONECT    7    6    8                                                       
CONECT    8    7    9   10                                                  
CONECT    9    8                                                            
CONECT   10    8   11                                                       
CONECT   11   10   12                                                       
CONECT   12   11   13                                                       
CONECT   13   12   14                                                       
CONECT   14   13   15   18                                                  
CONECT   15   14   16                                                       
CONECT   16   15   17                                                       
CONECT   17   16   18                                                       
CONECT   18   14   17                                                       
CONECT   19    2   20   21                                                  
CONECT   20   19                                                            
CONECT   21   19                                                            
MASTER        0    0    0    0    0    0    0    0   21    0   42    0
END

COMPND    HMDB0012996
HETATM    1  N1  UNL     1       6.274   1.219   0.671  1.00  0.00           N  
HETATM    2  C1  UNL     1       5.230   0.188   0.781  1.00  0.00           C  
HETATM    3  C2  UNL     1       4.665  -0.011  -0.602  1.00  0.00           C  
HETATM    4  C3  UNL     1       3.591  -1.047  -0.625  1.00  0.00           C  
HETATM    5  C4  UNL     1       3.090  -1.220  -2.052  1.00  0.00           C  
HETATM    6  C5  UNL     1       2.536   0.090  -2.539  1.00  0.00           C  
HETATM    7  N2  UNL     1       1.464   0.514  -1.686  1.00  0.00           N  
HETATM    8  C6  UNL     1       0.307  -0.269  -1.542  1.00  0.00           C  
HETATM    9  O1  UNL     1       0.146  -1.358  -2.141  1.00  0.00           O  
HETATM   10  C7  UNL     1      -0.780   0.230  -0.626  1.00  0.00           C  
HETATM   11  C8  UNL     1      -1.928  -0.766  -0.620  1.00  0.00           C  
HETATM   12  C9  UNL     1      -2.990  -0.192   0.329  1.00  0.00           C  
HETATM   13  C10 UNL     1      -4.178  -1.081   0.425  1.00  0.00           C  
HETATM   14  C11 UNL     1      -5.194  -0.541   1.347  1.00  0.00           C  
HETATM   15  C12 UNL     1      -5.717   0.805   0.928  1.00  0.00           C  
HETATM   16  C13 UNL     1      -6.647   1.295   2.038  1.00  0.00           C  
HETATM   17  S1  UNL     1      -8.029   0.085   1.874  1.00  0.00           S  
HETATM   18  S2  UNL     1      -6.733  -1.561   1.321  1.00  0.00           S  
HETATM   19  C14 UNL     1       4.205   0.651   1.726  1.00  0.00           C  
HETATM   20  O2  UNL     1       4.282   1.833   2.169  1.00  0.00           O  
HETATM   21  O3  UNL     1       3.152  -0.125   2.168  1.00  0.00           O  
HETATM   22  H1  UNL     1       6.100   1.794  -0.161  1.00  0.00           H  
HETATM   23  H2  UNL     1       7.182   0.723   0.551  1.00  0.00           H  
HETATM   24  H3  UNL     1       5.692  -0.766   1.086  1.00  0.00           H  
HETATM   25  H4  UNL     1       5.482  -0.268  -1.305  1.00  0.00           H  
HETATM   26  H5  UNL     1       4.284   0.988  -0.922  1.00  0.00           H  
HETATM   27  H6  UNL     1       4.004  -2.022  -0.318  1.00  0.00           H  
HETATM   28  H7  UNL     1       2.736  -0.727   0.026  1.00  0.00           H  
HETATM   29  H8  UNL     1       2.333  -1.998  -2.112  1.00  0.00           H  
HETATM   30  H9  UNL     1       3.977  -1.461  -2.714  1.00  0.00           H  
HETATM   31  H10 UNL     1       3.323   0.876  -2.670  1.00  0.00           H  
HETATM   32  H11 UNL     1       2.126  -0.102  -3.565  1.00  0.00           H  
HETATM   33  H12 UNL     1       1.559   1.435  -1.159  1.00  0.00           H  
HETATM   34  H13 UNL     1      -1.113   1.232  -0.935  1.00  0.00           H  
HETATM   35  H14 UNL     1      -0.325   0.324   0.379  1.00  0.00           H  
HETATM   36  H15 UNL     1      -2.340  -0.839  -1.645  1.00  0.00           H  
HETATM   37  H16 UNL     1      -1.586  -1.757  -0.267  1.00  0.00           H  
HETATM   38  H17 UNL     1      -3.292   0.809  -0.035  1.00  0.00           H  
HETATM   39  H18 UNL     1      -2.540  -0.050   1.331  1.00  0.00           H  
HETATM   40  H19 UNL     1      -3.809  -2.053   0.873  1.00  0.00           H  
HETATM   41  H20 UNL     1      -4.564  -1.327  -0.586  1.00  0.00           H  
HETATM   42  H21 UNL     1      -4.781  -0.518   2.376  1.00  0.00           H  
HETATM   43  H22 UNL     1      -4.964   1.560   0.706  1.00  0.00           H  
HETATM   44  H23 UNL     1      -6.389   0.651   0.041  1.00  0.00           H  
HETATM   45  H24 UNL     1      -6.133   1.179   2.993  1.00  0.00           H  
HETATM   46  H25 UNL     1      -6.961   2.301   1.775  1.00  0.00           H  
HETATM   47  H26 UNL     1       3.253  -0.772   2.915  1.00  0.00           H  
CONECT    1    2   22   23
CONECT    2    3   19   24
CONECT    3    4   25   26
CONECT    4    5   27   28
CONECT    5    6   29   30
CONECT    6    7   31   32
CONECT    7    8   33
CONECT    8    9    9   10
CONECT   10   11   34   35
CONECT   11   12   36   37
CONECT   12   13   38   39
CONECT   13   14   40   41
CONECT   14   15   18   42
CONECT   15   16   43   44
CONECT   16   17   45   46
CONECT   17   18
CONECT   19   20   20   21
CONECT   21   47
END

HMDB0012996
     RDKit          3D
Lipoyllysine
 47 47  0  0  0  0  0  0  0  0999 V2000
    6.2744    1.2190    0.6712 N   0  0  0  0  0  0  0  0  0  0  0  0
    5.2304    0.1875    0.7807 C   0  0  2  0  0  0  0  0  0  0  0  0
    4.6650   -0.0105   -0.6022 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5909   -1.0473   -0.6249 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.0896   -1.2205   -2.0524 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.5357    0.0899   -2.5395 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4640    0.5136   -1.6856 N   0  0  0  0  0  0  0  0  0  0  0  0
    0.3071   -0.2688   -1.5417 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.1462   -1.3578   -2.1414 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7799    0.2299   -0.6264 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9281   -0.7661   -0.6200 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.9899   -0.1919    0.3288 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.1780   -1.0810    0.4252 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.1940   -0.5408    1.3466 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.7167    0.8055    0.9281 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.6472    1.2950    2.0382 C   0  0  0  0  0  0  0  0  0  0  0  0
   -8.0287    0.0852    1.8739 S   0  0  0  0  0  0  0  0  0  0  0  0
   -6.7331   -1.5613    1.3212 S   0  0  0  0  0  0  0  0  0  0  0  0
    4.2046    0.6514    1.7256 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.2817    1.8325    2.1687 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.1523   -0.1246    2.1684 O   0  0  0  0  0  0  0  0  0  0  0  0
    6.0999    1.7937   -0.1610 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.1817    0.7235    0.5511 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.6924   -0.7662    1.0861 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.4819   -0.2680   -1.3054 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.2845    0.9880   -0.9224 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.0044   -2.0219   -0.3177 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.7360   -0.7274    0.0260 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.3332   -1.9975   -2.1115 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.9769   -1.4611   -2.7138 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.3226    0.8755   -2.6703 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.1263   -0.1018   -3.5652 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.5591    1.4352   -1.1594 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1132    1.2315   -0.9347 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3246    0.3238    0.3793 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3404   -0.8389   -1.6446 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5861   -1.7570   -0.2673 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.2918    0.8094   -0.0346 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5396   -0.0497    1.3309 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.8093   -2.0533    0.8727 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.5643   -1.3270   -0.5865 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.7806   -0.5184    2.3757 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.9642    1.5601    0.7065 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.3894    0.6513    0.0413 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.1333    1.1789    2.9927 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.9615    2.3010    1.7749 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.2528   -0.7720    2.9147 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  1  0
  3  4  1  0
  4  5  1  0
  5  6  1  0
  6  7  1  0
  7  8  1  0
  8  9  2  0
  8 10  1  0
 10 11  1  0
 11 12  1  0
 12 13  1  0
 13 14  1  0
 14 15  1  0
 15 16  1  0
 16 17  1  0
 17 18  1  0
  2 19  1  0
 19 20  2  0
 19 21  1  0
 18 14  1  0
  1 22  1  0
  1 23  1  0
  2 24  1  1
  3 25  1  0
  3 26  1  0
  4 27  1  0
  4 28  1  0
  5 29  1  0
  5 30  1  0
  6 31  1  0
  6 32  1  0
  7 33  1  0
 10 34  1  0
 10 35  1  0
 11 36  1  0
 11 37  1  0
 12 38  1  0
 12 39  1  0
 13 40  1  0
 13 41  1  0
 14 42  1  0
 15 43  1  0
 15 44  1  0
 16 45  1  0
 16 46  1  0
 21 47  1  0
M  END

View in JSmol View NMR Assignments View Stereo Labels

Synonyms

Value	Source
DL-Lipoyl-L-lysine	HMDB
Lipoyl-N-epsilon-lysine	HMDB
mono-1,2-Dithiolane-3-pentanoate	HMDB
mono-1,2-Dithiolane-3-pentanoate-L-lysine	HMDB
mono-1,2-Dithiolane-3-pentanoic acid	HMDB
(2R)-2-Amino-6-{[5-(1,2-dithiolan-3-yl)-1-hydroxypentylidene]amino}hexanoate	Generator
Lipoyllysine	MeSH

Chemical Formula

C₁₄H₂₆N₂O₃S₂

Average Molecular Weight

334.498

Monoisotopic Molecular Weight

334.138484088

IUPAC Name

(2R)-2-amino-6-[5-(1,2-dithiolan-3-yl)pentanamido]hexanoic acid

Traditional Name

(2R)-2-amino-6-[5-(1,2-dithiolan-3-yl)pentanamido]hexanoic acid

CAS Registry Number

20902-53-8

SMILES

N[C@H](CCCCNC(=O)CCCCC1CCSS1)C(O)=O

InChI Identifier

InChI=1S/C14H26N2O3S2/c15-12(14(18)19)6-3-4-9-16-13(17)7-2-1-5-11-8-10-20-21-11/h11-12H,1-10,15H2,(H,16,17)(H,18,19)/t11?,12-/m1/s1

InChI Key

COTIXRRJLCSLLS-PIJUOVFKSA-N

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as lipoamides. Lipoamides are compounds containing a lipoamide moiety, which consists of a pentanamide attached to the C3 carbon atom of a 1,2-dithiolane ring.

Kingdom

Organic compounds

Super Class

Organoheterocyclic compounds

Class

Dithiolanes

Sub Class

Lipoamides

Direct Parent

Lipoamides

Alternative Parents

Substituents

Lipoamide
Alpha-amino acid
Alpha-amino acid or derivatives
D-alpha-amino acid
Medium-chain fatty acid
Heterocyclic fatty acid
Fatty amide
N-acyl-amine
Fatty acyl
Fatty acid
1,2-dithiolane
Amino acid or derivatives
Carboxamide group
Amino acid
Organic disulfide
Secondary carboxylic acid amide
Monocarboxylic acid or derivatives
Carboxylic acid
Carboxylic acid derivative
Hydrocarbon derivative
Primary aliphatic amine
Organic oxygen compound
Organic oxide
Organopnictogen compound
Organic nitrogen compound
Carbonyl group
Amine
Organonitrogen compound
Organooxygen compound
Primary amine
Aliphatic heteromonocyclic compound

Molecular Framework

Aliphatic heteromonocyclic compounds

External Descriptors

Not Available

Ontology

Not Available

Endogenous (HMDB: HMDB0012996)

Process

Not Available

Role

Not Available

Physical Properties

State

Solid

Experimental Molecular Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Experimental Chromatographic Properties

Not Available

Predicted Molecular Properties

Property	Value	Source
Water Solubility	0.095 g/L	ALOGPS
logP	-0.02	ALOGPS
logP	-0.82	ChemAxon
logS	-3.6	ALOGPS
pKa (Strongest Acidic)	2.24	ChemAxon
pKa (Strongest Basic)	9.53	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	4	ChemAxon
Hydrogen Donor Count	3	ChemAxon
Polar Surface Area	92.42 Å²	ChemAxon
Rotatable Bond Count	11	ChemAxon
Refractivity	88.98 m³·mol⁻¹	ChemAxon
Polarizability	36.78 Å³	ChemAxon
Number of Rings	1	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	Yes	ChemAxon
Ghose Filter	No	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

Predicted Chromatographic Properties

Predicted Collision Cross Sections

Predictor	Adduct Type	CCS Value (Å²)	Reference
DarkChem	[M+H]+	175.406	31661259
DarkChem	[M-H]-	170.039	31661259
DeepCCS	[M+H]+	172.444	30932474
DeepCCS	[M-H]-	170.086	30932474
DeepCCS	[M-2H]-	203.171	30932474
DeepCCS	[M+Na]+	178.537	30932474
AllCCS	[M+H]+	174.8	32859911
AllCCS	[M+H-H2O]+	172.4	32859911
AllCCS	[M+NH4]+	177.1	32859911
AllCCS	[M+Na]+	177.7	32859911
AllCCS	[M-H]-	177.3	32859911
AllCCS	[M+Na-2H]-	178.0	32859911
AllCCS	[M+HCOO]-	178.9	32859911

Predicted Kovats Retention Indices

Underivatized

Metabolite	SMILES	Kovats RI Value	Column Type	Reference
Lipoyllysine	N[C@H](CCCCNC(=O)CCCCC1CCSS1)C(O)=O	4212.2	Standard polar	33892256
Lipoyllysine	N[C@H](CCCCNC(=O)CCCCC1CCSS1)C(O)=O	2845.6	Standard non polar	33892256
Lipoyllysine	N[C@H](CCCCNC(=O)CCCCC1CCSS1)C(O)=O	3202.2	Semi standard non polar	33892256

Derivatized

Derivative Name / Structure	SMILES	Kovats RI Value	Column Type	Reference
Lipoyllysine,1TMS,isomer #1	C[Si](C)(C)OC(=O)[C@H](N)CCCCNC(=O)CCCCC1CCSS1	3081.7	Semi standard non polar	33892256
Lipoyllysine,1TMS,isomer #2	C[Si](C)(C)N[C@H](CCCCNC(=O)CCCCC1CCSS1)C(=O)O	3187.2	Semi standard non polar	33892256
Lipoyllysine,1TMS,isomer #3	C[Si](C)(C)N(CCCC[C@@H](N)C(=O)O)C(=O)CCCCC1CCSS1	3139.4	Semi standard non polar	33892256
Lipoyllysine,2TMS,isomer #1	C[Si](C)(C)N[C@H](CCCCNC(=O)CCCCC1CCSS1)C(=O)O[Si](C)(C)C	3221.5	Semi standard non polar	33892256
Lipoyllysine,2TMS,isomer #1	C[Si](C)(C)N[C@H](CCCCNC(=O)CCCCC1CCSS1)C(=O)O[Si](C)(C)C	3061.2	Standard non polar	33892256
Lipoyllysine,2TMS,isomer #1	C[Si](C)(C)N[C@H](CCCCNC(=O)CCCCC1CCSS1)C(=O)O[Si](C)(C)C	4398.5	Standard polar	33892256
Lipoyllysine,2TMS,isomer #2	C[Si](C)(C)OC(=O)[C@H](N)CCCCN(C(=O)CCCCC1CCSS1)[Si](C)(C)C	3125.3	Semi standard non polar	33892256
Lipoyllysine,2TMS,isomer #2	C[Si](C)(C)OC(=O)[C@H](N)CCCCN(C(=O)CCCCC1CCSS1)[Si](C)(C)C	3045.3	Standard non polar	33892256
Lipoyllysine,2TMS,isomer #2	C[Si](C)(C)OC(=O)[C@H](N)CCCCN(C(=O)CCCCC1CCSS1)[Si](C)(C)C	4691.6	Standard polar	33892256
Lipoyllysine,2TMS,isomer #3	C[Si](C)(C)N([C@H](CCCCNC(=O)CCCCC1CCSS1)C(=O)O)[Si](C)(C)C	3350.2	Semi standard non polar	33892256
Lipoyllysine,2TMS,isomer #3	C[Si](C)(C)N([C@H](CCCCNC(=O)CCCCC1CCSS1)C(=O)O)[Si](C)(C)C	3123.1	Standard non polar	33892256
Lipoyllysine,2TMS,isomer #3	C[Si](C)(C)N([C@H](CCCCNC(=O)CCCCC1CCSS1)C(=O)O)[Si](C)(C)C	4500.1	Standard polar	33892256
Lipoyllysine,2TMS,isomer #4	C[Si](C)(C)N[C@H](CCCCN(C(=O)CCCCC1CCSS1)[Si](C)(C)C)C(=O)O	3192.8	Semi standard non polar	33892256
Lipoyllysine,2TMS,isomer #4	C[Si](C)(C)N[C@H](CCCCN(C(=O)CCCCC1CCSS1)[Si](C)(C)C)C(=O)O	3102.6	Standard non polar	33892256
Lipoyllysine,2TMS,isomer #4	C[Si](C)(C)N[C@H](CCCCN(C(=O)CCCCC1CCSS1)[Si](C)(C)C)C(=O)O	4532.1	Standard polar	33892256
Lipoyllysine,3TMS,isomer #1	C[Si](C)(C)OC(=O)[C@@H](CCCCNC(=O)CCCCC1CCSS1)N([Si](C)(C)C)[Si](C)(C)C	3323.2	Semi standard non polar	33892256
Lipoyllysine,3TMS,isomer #1	C[Si](C)(C)OC(=O)[C@@H](CCCCNC(=O)CCCCC1CCSS1)N([Si](C)(C)C)[Si](C)(C)C	3166.0	Standard non polar	33892256
Lipoyllysine,3TMS,isomer #1	C[Si](C)(C)OC(=O)[C@@H](CCCCNC(=O)CCCCC1CCSS1)N([Si](C)(C)C)[Si](C)(C)C	3972.9	Standard polar	33892256
Lipoyllysine,3TMS,isomer #2	C[Si](C)(C)N[C@H](CCCCN(C(=O)CCCCC1CCSS1)[Si](C)(C)C)C(=O)O[Si](C)(C)C	3219.1	Semi standard non polar	33892256
Lipoyllysine,3TMS,isomer #2	C[Si](C)(C)N[C@H](CCCCN(C(=O)CCCCC1CCSS1)[Si](C)(C)C)C(=O)O[Si](C)(C)C	3146.1	Standard non polar	33892256
Lipoyllysine,3TMS,isomer #2	C[Si](C)(C)N[C@H](CCCCN(C(=O)CCCCC1CCSS1)[Si](C)(C)C)C(=O)O[Si](C)(C)C	3942.7	Standard polar	33892256
Lipoyllysine,3TMS,isomer #3	C[Si](C)(C)N(CCCC[C@H](C(=O)O)N([Si](C)(C)C)[Si](C)(C)C)C(=O)CCCCC1CCSS1	3263.0	Semi standard non polar	33892256
Lipoyllysine,3TMS,isomer #3	C[Si](C)(C)N(CCCC[C@H](C(=O)O)N([Si](C)(C)C)[Si](C)(C)C)C(=O)CCCCC1CCSS1	3218.0	Standard non polar	33892256
Lipoyllysine,3TMS,isomer #3	C[Si](C)(C)N(CCCC[C@H](C(=O)O)N([Si](C)(C)C)[Si](C)(C)C)C(=O)CCCCC1CCSS1	4083.3	Standard polar	33892256
Lipoyllysine,4TMS,isomer #1	C[Si](C)(C)OC(=O)[C@@H](CCCCN(C(=O)CCCCC1CCSS1)[Si](C)(C)C)N([Si](C)(C)C)[Si](C)(C)C	3270.2	Semi standard non polar	33892256
Lipoyllysine,4TMS,isomer #1	C[Si](C)(C)OC(=O)[C@@H](CCCCN(C(=O)CCCCC1CCSS1)[Si](C)(C)C)N([Si](C)(C)C)[Si](C)(C)C	3245.9	Standard non polar	33892256
Lipoyllysine,4TMS,isomer #1	C[Si](C)(C)OC(=O)[C@@H](CCCCN(C(=O)CCCCC1CCSS1)[Si](C)(C)C)N([Si](C)(C)C)[Si](C)(C)C	3626.9	Standard polar	33892256
Lipoyllysine,1TBDMS,isomer #1	CC(C)(C)[Si](C)(C)OC(=O)[C@H](N)CCCCNC(=O)CCCCC1CCSS1	3331.0	Semi standard non polar	33892256
Lipoyllysine,1TBDMS,isomer #2	CC(C)(C)[Si](C)(C)N[C@H](CCCCNC(=O)CCCCC1CCSS1)C(=O)O	3432.1	Semi standard non polar	33892256
Lipoyllysine,1TBDMS,isomer #3	CC(C)(C)[Si](C)(C)N(CCCC[C@@H](N)C(=O)O)C(=O)CCCCC1CCSS1	3366.7	Semi standard non polar	33892256
Lipoyllysine,2TBDMS,isomer #1	CC(C)(C)[Si](C)(C)N[C@H](CCCCNC(=O)CCCCC1CCSS1)C(=O)O[Si](C)(C)C(C)(C)C	3657.2	Semi standard non polar	33892256
Lipoyllysine,2TBDMS,isomer #1	CC(C)(C)[Si](C)(C)N[C@H](CCCCNC(=O)CCCCC1CCSS1)C(=O)O[Si](C)(C)C(C)(C)C	3520.0	Standard non polar	33892256
Lipoyllysine,2TBDMS,isomer #1	CC(C)(C)[Si](C)(C)N[C@H](CCCCNC(=O)CCCCC1CCSS1)C(=O)O[Si](C)(C)C(C)(C)C	4160.7	Standard polar	33892256
Lipoyllysine,2TBDMS,isomer #2	CC(C)(C)[Si](C)(C)OC(=O)[C@H](N)CCCCN(C(=O)CCCCC1CCSS1)[Si](C)(C)C(C)(C)C	3560.3	Semi standard non polar	33892256
Lipoyllysine,2TBDMS,isomer #2	CC(C)(C)[Si](C)(C)OC(=O)[C@H](N)CCCCN(C(=O)CCCCC1CCSS1)[Si](C)(C)C(C)(C)C	3484.8	Standard non polar	33892256
Lipoyllysine,2TBDMS,isomer #2	CC(C)(C)[Si](C)(C)OC(=O)[C@H](N)CCCCN(C(=O)CCCCC1CCSS1)[Si](C)(C)C(C)(C)C	4497.8	Standard polar	33892256
Lipoyllysine,2TBDMS,isomer #3	CC(C)(C)[Si](C)(C)N([C@H](CCCCNC(=O)CCCCC1CCSS1)C(=O)O)[Si](C)(C)C(C)(C)C	3788.8	Semi standard non polar	33892256
Lipoyllysine,2TBDMS,isomer #3	CC(C)(C)[Si](C)(C)N([C@H](CCCCNC(=O)CCCCC1CCSS1)C(=O)O)[Si](C)(C)C(C)(C)C	3531.2	Standard non polar	33892256
Lipoyllysine,2TBDMS,isomer #3	CC(C)(C)[Si](C)(C)N([C@H](CCCCNC(=O)CCCCC1CCSS1)C(=O)O)[Si](C)(C)C(C)(C)C	4295.6	Standard polar	33892256
Lipoyllysine,2TBDMS,isomer #4	CC(C)(C)[Si](C)(C)N[C@H](CCCCN(C(=O)CCCCC1CCSS1)[Si](C)(C)C(C)(C)C)C(=O)O	3661.3	Semi standard non polar	33892256
Lipoyllysine,2TBDMS,isomer #4	CC(C)(C)[Si](C)(C)N[C@H](CCCCN(C(=O)CCCCC1CCSS1)[Si](C)(C)C(C)(C)C)C(=O)O	3522.7	Standard non polar	33892256
Lipoyllysine,2TBDMS,isomer #4	CC(C)(C)[Si](C)(C)N[C@H](CCCCN(C(=O)CCCCC1CCSS1)[Si](C)(C)C(C)(C)C)C(=O)O	4304.0	Standard polar	33892256
Lipoyllysine,3TBDMS,isomer #1	CC(C)(C)[Si](C)(C)OC(=O)[C@@H](CCCCNC(=O)CCCCC1CCSS1)N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C	3973.0	Semi standard non polar	33892256
Lipoyllysine,3TBDMS,isomer #1	CC(C)(C)[Si](C)(C)OC(=O)[C@@H](CCCCNC(=O)CCCCC1CCSS1)N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C	3766.2	Standard non polar	33892256
Lipoyllysine,3TBDMS,isomer #1	CC(C)(C)[Si](C)(C)OC(=O)[C@@H](CCCCNC(=O)CCCCC1CCSS1)N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C	3913.4	Standard polar	33892256
Lipoyllysine,3TBDMS,isomer #2	CC(C)(C)[Si](C)(C)N[C@H](CCCCN(C(=O)CCCCC1CCSS1)[Si](C)(C)C(C)(C)C)C(=O)O[Si](C)(C)C(C)(C)C	3812.1	Semi standard non polar	33892256
Lipoyllysine,3TBDMS,isomer #2	CC(C)(C)[Si](C)(C)N[C@H](CCCCN(C(=O)CCCCC1CCSS1)[Si](C)(C)C(C)(C)C)C(=O)O[Si](C)(C)C(C)(C)C	3752.6	Standard non polar	33892256
Lipoyllysine,3TBDMS,isomer #2	CC(C)(C)[Si](C)(C)N[C@H](CCCCN(C(=O)CCCCC1CCSS1)[Si](C)(C)C(C)(C)C)C(=O)O[Si](C)(C)C(C)(C)C	3922.4	Standard polar	33892256
Lipoyllysine,3TBDMS,isomer #3	CC(C)(C)[Si](C)(C)N(CCCC[C@H](C(=O)O)N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C)C(=O)CCCCC1CCSS1	3928.6	Semi standard non polar	33892256
Lipoyllysine,3TBDMS,isomer #3	CC(C)(C)[Si](C)(C)N(CCCC[C@H](C(=O)O)N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C)C(=O)CCCCC1CCSS1	3779.0	Standard non polar	33892256
Lipoyllysine,3TBDMS,isomer #3	CC(C)(C)[Si](C)(C)N(CCCC[C@H](C(=O)O)N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C)C(=O)CCCCC1CCSS1	4007.8	Standard polar	33892256
Lipoyllysine,4TBDMS,isomer #1	CC(C)(C)[Si](C)(C)OC(=O)[C@@H](CCCCN(C(=O)CCCCC1CCSS1)[Si](C)(C)C(C)(C)C)N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C	4088.8	Semi standard non polar	33892256
Lipoyllysine,4TBDMS,isomer #1	CC(C)(C)[Si](C)(C)OC(=O)[C@@H](CCCCN(C(=O)CCCCC1CCSS1)[Si](C)(C)C(C)(C)C)N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C	3967.7	Standard non polar	33892256
Lipoyllysine,4TBDMS,isomer #1	CC(C)(C)[Si](C)(C)OC(=O)[C@@H](CCCCN(C(=O)CCCCC1CCSS1)[Si](C)(C)C(C)(C)C)N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C	3761.1	Standard polar	33892256

Spectra

GC-MS Spectra

Spectrum Type	Description	Splash Key	Deposition Date	Source	View
Predicted GC-MS	Predicted GC-MS Spectrum - Lipoyllysine GC-MS (Non-derivatized) - 70eV, Positive	splash10-0f7x-6940000000-e2852a69a691a0b4e052	2017-09-01	Wishart Lab	View Spectrum
Predicted GC-MS	Predicted GC-MS Spectrum - Lipoyllysine GC-MS (1 TMS) - 70eV, Positive	splash10-000i-5890000000-4f801f14ad94ad1cea60	2017-10-06	Wishart Lab	View Spectrum
Predicted GC-MS	Predicted GC-MS Spectrum - Lipoyllysine GC-MS (Non-derivatized) - 70eV, Positive	Not Available	2021-10-12	Wishart Lab	View Spectrum

MS/MS Spectra

Spectrum Type	Description	Splash Key	Deposition Date	Source	View
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - Lipoyllysine 10V, Positive-QTOF	splash10-000i-1879000000-6f43a61cf41cde5cbb45	2017-09-01	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - Lipoyllysine 20V, Positive-QTOF	splash10-0f8j-3930000000-30b6cdcd9d74ed833908	2017-09-01	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - Lipoyllysine 40V, Positive-QTOF	splash10-001i-8900000000-d75ea84ad8201a4be470	2017-09-01	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - Lipoyllysine 10V, Negative-QTOF	splash10-00lj-0092000000-d7e5a58404634abf9cff	2017-09-01	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - Lipoyllysine 20V, Negative-QTOF	splash10-0fr2-1792000000-526549b35a7a470a3eb8	2017-09-01	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - Lipoyllysine 40V, Negative-QTOF	splash10-0a6v-9600000000-41d354d3a4c3b350baa8	2017-09-01	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - Lipoyllysine 10V, Positive-QTOF	splash10-000i-0119000000-686df5638022fcd33675	2021-09-22	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - Lipoyllysine 20V, Positive-QTOF	splash10-000i-2966000000-86570af9049501ec0f53	2021-09-22	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - Lipoyllysine 40V, Positive-QTOF	splash10-001i-9400000000-2c5f944fc33ed86fdc5e	2021-09-22	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - Lipoyllysine 10V, Negative-QTOF	splash10-001i-0009000000-2d7d1d7eaba5e0b59f06	2021-09-22	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - Lipoyllysine 20V, Negative-QTOF	splash10-001i-3189000000-b63f630a7026ad24f798	2021-09-22	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - Lipoyllysine 40V, Negative-QTOF	splash10-0006-9421000000-c36dffa2e837fa13c800	2021-09-22	Wishart Lab	View Spectrum

NMR Spectra

Spectrum Type	Description	Deposition Date	Source	View
Predicted 1D NMR	¹³C NMR Spectrum (1D, 100 MHz, D₂O, predicted)	2021-09-25	Wishart Lab	View Spectrum
Predicted 1D NMR	¹H NMR Spectrum (1D, 100 MHz, D₂O, predicted)	2021-09-25	Wishart Lab	View Spectrum
Predicted 1D NMR	¹³C NMR Spectrum (1D, 1000 MHz, D₂O, predicted)	2021-09-25	Wishart Lab	View Spectrum
Predicted 1D NMR	¹H NMR Spectrum (1D, 1000 MHz, D₂O, predicted)	2021-09-25	Wishart Lab	View Spectrum
Predicted 1D NMR	¹³C NMR Spectrum (1D, 200 MHz, D₂O, predicted)	2021-09-25	Wishart Lab	View Spectrum
Predicted 1D NMR	¹H NMR Spectrum (1D, 200 MHz, D₂O, predicted)	2021-09-25	Wishart Lab	View Spectrum
Predicted 1D NMR	¹³C NMR Spectrum (1D, 300 MHz, D₂O, predicted)	2021-09-25	Wishart Lab	View Spectrum
Predicted 1D NMR	¹H NMR Spectrum (1D, 300 MHz, D₂O, predicted)	2021-09-25	Wishart Lab	View Spectrum
Predicted 1D NMR	¹³C NMR Spectrum (1D, 400 MHz, D₂O, predicted)	2021-09-25	Wishart Lab	View Spectrum
Predicted 1D NMR	¹H NMR Spectrum (1D, 400 MHz, D₂O, predicted)	2021-09-25	Wishart Lab	View Spectrum
Predicted 1D NMR	¹³C NMR Spectrum (1D, 500 MHz, D₂O, predicted)	2021-09-25	Wishart Lab	View Spectrum
Predicted 1D NMR	¹H NMR Spectrum (1D, 500 MHz, D₂O, predicted)	2021-09-25	Wishart Lab	View Spectrum
Predicted 1D NMR	¹³C NMR Spectrum (1D, 600 MHz, D₂O, predicted)	2021-09-25	Wishart Lab	View Spectrum
Predicted 1D NMR	¹H NMR Spectrum (1D, 600 MHz, D₂O, predicted)	2021-09-25	Wishart Lab	View Spectrum
Predicted 1D NMR	¹³C NMR Spectrum (1D, 700 MHz, D₂O, predicted)	2021-09-25	Wishart Lab	View Spectrum
Predicted 1D NMR	¹H NMR Spectrum (1D, 700 MHz, D₂O, predicted)	2021-09-25	Wishart Lab	View Spectrum
Predicted 1D NMR	¹³C NMR Spectrum (1D, 800 MHz, D₂O, predicted)	2021-09-25	Wishart Lab	View Spectrum
Predicted 1D NMR	¹H NMR Spectrum (1D, 800 MHz, D₂O, predicted)	2021-09-25	Wishart Lab	View Spectrum
Predicted 1D NMR	¹³C NMR Spectrum (1D, 900 MHz, D₂O, predicted)	2021-09-25	Wishart Lab	View Spectrum
Predicted 1D NMR	¹H NMR Spectrum (1D, 900 MHz, D₂O, predicted)	2021-09-25	Wishart Lab	View Spectrum

Biological Properties

Cellular Locations

Not Available

Biospecimen Locations

Not Available

Tissue Locations

Not Available

Pathways

Not Available

Name	SMPDB/PathBank	KEGG

Normal Concentrations

Not Available

Abnormal Concentrations

Not Available

Associated Disorders and Diseases

Disease References

None

Associated OMIM IDs

None

External Links

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FooDB ID

FDB029239

KNApSAcK ID

Not Available

Chemspider ID

35032557

KEGG Compound ID

Not Available

BioCyc ID

Protein-6-N-lipoyl-lysine

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

53481572

PDB ID

Not Available

ChEBI ID

175262

Food Biomarker Ontology

Not Available

VMH ID

CE2102

MarkerDB ID

Not Available

Good Scents ID

Not Available

References

Synthesis Reference

Not Available

Material Safety Data Sheet (MSDS)

Not Available

General References

Not Available

Showing metabocard for Lipoyllysine (HMDB0012996)

MOL for HMDB0012996 (Lipoyllysine)

3D MOL for HMDB0012996 (Lipoyllysine)

3D SDF for HMDB0012996 (Lipoyllysine)

3D-SDF for HMDB0012996 (Lipoyllysine)

PDB for HMDB0012996 (Lipoyllysine)

3D PDB for HMDB0012996 (Lipoyllysine)

SMILES for HMDB0012996 (Lipoyllysine)

INCHI for HMDB0012996 (Lipoyllysine)

Structure for HMDB0012996 (Lipoyllysine)

3D Structure for HMDB0012996 (Lipoyllysine)

Predicted Collision Cross Sections

Predicted Kovats Retention Indices

Underivatized

Derivatized

GC-MS Spectra

MS/MS Spectra

NMR Spectra