Hmdb loader
Record Information
Version5.0
StatusExpected but not Quantified
Creation Date2012-09-06 15:16:50 UTC
Update Date2022-03-07 02:51:48 UTC
HMDB IDHMDB0014949
Secondary Accession Numbers
  • HMDB14949
Metabolite Identification
Common NameRibavirin
DescriptionRibavirin is only found in individuals that have used or taken this drug. It is a nucleoside antimetabolite antiviral agent that blocks nucleic acid synthesis and is used against both RNA and DNA viruses. [PubChem]Ribavirin is readily phosphorylated intracellularly by adenosine kinase to ribavirin mono-, di-, and triphosphate metabolites. Ribavirin triphosphate (RTP) is a potent competitive inhibitor of inosine monophosphate (IMP) dehydrogenase, viral RNA polymerase and messenger RNA (mRNA) guanylyltransferase (viral) and can be incorporated into RNA in RNA viral species. Guanylyltranserase inhibition stops the capping of mRNA. These diverse effects result in a marked reduction of intracellular guanosine triphosphate (GTP) pools and inhibition of viral RNA and protein synthesis. Ribavirin is also incorporated into the viral genome causing lethal mutagenesis and a subsequent decrease in specific viral infectivity.
Structure
Data?1582753241
Synonyms
ValueSource
1-beta-D-Ribofuranosyl-1,2,4-triazole-3-carboxamideChEBI
1-beta-D-Ribofuranosyl-1H-1,2,4-triazole-3-carboxamideChEBI
RBVChEBI
RibavirinaChEBI
RibavirineChEBI
RibavirinumChEBI
CopegusKegg
RebetolKegg
RibasphereKegg
VirazoleKegg
1-b-D-Ribofuranosyl-1,2,4-triazole-3-carboxamideGenerator
1-Β-D-ribofuranosyl-1,2,4-triazole-3-carboxamideGenerator
1-b-D-Ribofuranosyl-1H-1,2,4-triazole-3-carboxamideGenerator
1-Β-D-ribofuranosyl-1H-1,2,4-triazole-3-carboxamideGenerator
VilonaHMDB
ICN brand OF ribavirinHMDB
RibamideHMDB
RibamidylHMDB
Ribavirin merck brandHMDB
VirazideHMDB
Grossman brand OF ribavirinHMDB
Merck brand OF ribavirinHMDB
Pfizer brand OF ribavirinHMDB
RibovirinHMDB
Three rivers pharmaceuticals brand OF ribavirinHMDB
Dermatech brand OF ribavirinHMDB
Essex brand OF ribavirinHMDB
RibamidilHMDB
TribavirinHMDB
ViramideHMDB
Chemical FormulaC8H12N4O5
Average Molecular Weight244.2047
Monoisotopic Molecular Weight244.080769514
IUPAC Name1-[(2R,3R,4S,5R)-3,4-dihydroxy-5-(hydroxymethyl)oxolan-2-yl]-1H-1,2,4-triazole-3-carboxamide
Traditional Nameribavirin
CAS Registry Number36791-04-5
SMILES
NC(=O)C1=NN(C=N1)[C@@H]1O[C@H](CO)[C@@H](O)[C@H]1O
InChI Identifier
InChI=1S/C8H12N4O5/c9-6(16)7-10-2-12(11-7)8-5(15)4(14)3(1-13)17-8/h2-5,8,13-15H,1H2,(H2,9,16)/t3-,4-,5-,8-/m1/s1
InChI KeyIWUCXVSUMQZMFG-AFCXAGJDSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as triazole ribonucleosides and ribonucleotides. These are nucleoside derivatives containing a ribose (or deoxyribose) moiety which is N-glycosylated to a triazole. Nucleotides have a phosphate group linked to the C5 carbon of the ribose (or deoxyribose) moiety.
KingdomOrganic compounds
Super ClassNucleosides, nucleotides, and analogues
ClassTriazole ribonucleosides and ribonucleotides
Sub ClassNot Available
Direct ParentTriazole ribonucleosides and ribonucleotides
Alternative Parents
Substituents
  • N-ribosyl-1,2,4-triazole
  • Glycosyl compound
  • N-glycosyl compound
  • Pentose monosaccharide
  • 2-heteroaryl carboxamide
  • Monosaccharide
  • Azole
  • Tetrahydrofuran
  • Triazole
  • 1,2,4-triazole
  • Heteroaromatic compound
  • Carboxamide group
  • Secondary alcohol
  • Primary carboxylic acid amide
  • Carboxylic acid derivative
  • Oxacycle
  • Azacycle
  • Organoheterocyclic compound
  • Alcohol
  • Organooxygen compound
  • Organonitrogen compound
  • Organopnictogen compound
  • Organic oxygen compound
  • Organic nitrogen compound
  • Hydrocarbon derivative
  • Organic oxide
  • Primary alcohol
  • Aromatic heteromonocyclic compound
Molecular FrameworkAromatic heteromonocyclic compounds
External Descriptors
Ontology
Physiological effectNot Available
Disposition
ProcessNot Available
RoleNot Available
Physical Properties
StateSolid
Experimental Molecular Properties
PropertyValueReference
Melting Point174 - 176 °CNot Available
Boiling PointNot AvailableNot Available
Water Solubility33.2 g/LNot Available
LogP-2.6Not Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
Water Solubility33.2 g/LALOGPS
logP-1.9ALOGPS
logP-2.8ChemAxon
logS-0.87ALOGPS
pKa (Strongest Acidic)11.88ChemAxon
pKa (Strongest Basic)-1.2ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count7ChemAxon
Hydrogen Donor Count4ChemAxon
Polar Surface Area143.72 ŲChemAxon
Rotatable Bond Count3ChemAxon
Refractivity64.57 m³·mol⁻¹ChemAxon
Polarizability22.18 ųChemAxon
Number of Rings2ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DarkChem[M+H]+154.54831661259
DarkChem[M-H]-152.18431661259
DeepCCS[M+H]+150.12530932474
DeepCCS[M-H]-147.72930932474
DeepCCS[M-2H]-182.04830932474
DeepCCS[M+Na]+156.87830932474
AllCCS[M+H]+154.632859911
AllCCS[M+H-H2O]+150.832859911
AllCCS[M+NH4]+158.132859911
AllCCS[M+Na]+159.132859911
AllCCS[M-H]-151.632859911
AllCCS[M+Na-2H]-151.532859911
AllCCS[M+HCOO]-151.432859911

Predicted Kovats Retention Indices

Underivatized

MetaboliteSMILESKovats RI ValueColumn TypeReference
RibavirinNC(=O)C1=NN(C=N1)[C@@H]1O[C@H](CO)[C@@H](O)[C@H]1O2826.3Standard polar33892256
RibavirinNC(=O)C1=NN(C=N1)[C@@H]1O[C@H](CO)[C@@H](O)[C@H]1O2044.0Standard non polar33892256
RibavirinNC(=O)C1=NN(C=N1)[C@@H]1O[C@H](CO)[C@@H](O)[C@H]1O2367.0Semi standard non polar33892256

Derivatized

Derivative Name / StructureSMILESKovats RI ValueColumn TypeReference
Ribavirin,1TMS,isomer #1C[Si](C)(C)OC[C@H]1O[C@@H](N2C=NC(C(N)=O)=N2)[C@H](O)[C@@H]1O2432.9Semi standard non polar33892256
Ribavirin,1TMS,isomer #2C[Si](C)(C)O[C@@H]1[C@@H](CO)O[C@@H](N2C=NC(C(N)=O)=N2)[C@@H]1O2392.7Semi standard non polar33892256
Ribavirin,1TMS,isomer #3C[Si](C)(C)O[C@@H]1[C@H](O)[C@@H](CO)O[C@H]1N1C=NC(C(N)=O)=N12404.5Semi standard non polar33892256
Ribavirin,1TMS,isomer #4C[Si](C)(C)NC(=O)C1=NN([C@@H]2O[C@H](CO)[C@@H](O)[C@H]2O)C=N12445.3Semi standard non polar33892256
Ribavirin,2TMS,isomer #1C[Si](C)(C)OC[C@H]1O[C@@H](N2C=NC(C(N)=O)=N2)[C@H](O[Si](C)(C)C)[C@@H]1O2394.2Semi standard non polar33892256
Ribavirin,2TMS,isomer #2C[Si](C)(C)OC[C@H]1O[C@@H](N2C=NC(C(N)=O)=N2)[C@H](O)[C@@H]1O[Si](C)(C)C2394.1Semi standard non polar33892256
Ribavirin,2TMS,isomer #3C[Si](C)(C)NC(=O)C1=NN([C@@H]2O[C@H](CO[Si](C)(C)C)[C@@H](O)[C@H]2O)C=N12436.3Semi standard non polar33892256
Ribavirin,2TMS,isomer #4C[Si](C)(C)O[C@@H]1[C@@H](CO)O[C@@H](N2C=NC(C(N)=O)=N2)[C@@H]1O[Si](C)(C)C2356.1Semi standard non polar33892256
Ribavirin,2TMS,isomer #5C[Si](C)(C)NC(=O)C1=NN([C@@H]2O[C@H](CO)[C@@H](O[Si](C)(C)C)[C@H]2O)C=N12426.9Semi standard non polar33892256
Ribavirin,2TMS,isomer #6C[Si](C)(C)NC(=O)C1=NN([C@@H]2O[C@H](CO)[C@@H](O)[C@H]2O[Si](C)(C)C)C=N12422.7Semi standard non polar33892256
Ribavirin,2TMS,isomer #7C[Si](C)(C)N(C(=O)C1=NN([C@@H]2O[C@H](CO)[C@@H](O)[C@H]2O)C=N1)[Si](C)(C)C2485.9Semi standard non polar33892256
Ribavirin,3TMS,isomer #1C[Si](C)(C)OC[C@H]1O[C@@H](N2C=NC(C(N)=O)=N2)[C@H](O[Si](C)(C)C)[C@@H]1O[Si](C)(C)C2348.5Semi standard non polar33892256
Ribavirin,3TMS,isomer #2C[Si](C)(C)NC(=O)C1=NN([C@@H]2O[C@H](CO[Si](C)(C)C)[C@@H](O)[C@H]2O[Si](C)(C)C)C=N12414.4Semi standard non polar33892256
Ribavirin,3TMS,isomer #3C[Si](C)(C)NC(=O)C1=NN([C@@H]2O[C@H](CO[Si](C)(C)C)[C@@H](O[Si](C)(C)C)[C@H]2O)C=N12408.1Semi standard non polar33892256
Ribavirin,3TMS,isomer #4C[Si](C)(C)OC[C@H]1O[C@@H](N2C=NC(C(=O)N([Si](C)(C)C)[Si](C)(C)C)=N2)[C@H](O)[C@@H]1O2466.3Semi standard non polar33892256
Ribavirin,3TMS,isomer #5C[Si](C)(C)NC(=O)C1=NN([C@@H]2O[C@H](CO)[C@@H](O[Si](C)(C)C)[C@H]2O[Si](C)(C)C)C=N12393.5Semi standard non polar33892256
Ribavirin,3TMS,isomer #6C[Si](C)(C)O[C@@H]1[C@@H](CO)O[C@@H](N2C=NC(C(=O)N([Si](C)(C)C)[Si](C)(C)C)=N2)[C@@H]1O2457.0Semi standard non polar33892256
Ribavirin,3TMS,isomer #7C[Si](C)(C)O[C@@H]1[C@H](O)[C@@H](CO)O[C@H]1N1C=NC(C(=O)N([Si](C)(C)C)[Si](C)(C)C)=N12450.6Semi standard non polar33892256
Ribavirin,4TMS,isomer #1C[Si](C)(C)NC(=O)C1=NN([C@@H]2O[C@H](CO[Si](C)(C)C)[C@@H](O[Si](C)(C)C)[C@H]2O[Si](C)(C)C)C=N12414.5Semi standard non polar33892256
Ribavirin,4TMS,isomer #1C[Si](C)(C)NC(=O)C1=NN([C@@H]2O[C@H](CO[Si](C)(C)C)[C@@H](O[Si](C)(C)C)[C@H]2O[Si](C)(C)C)C=N12390.2Standard non polar33892256
Ribavirin,4TMS,isomer #1C[Si](C)(C)NC(=O)C1=NN([C@@H]2O[C@H](CO[Si](C)(C)C)[C@@H](O[Si](C)(C)C)[C@H]2O[Si](C)(C)C)C=N13677.5Standard polar33892256
Ribavirin,4TMS,isomer #2C[Si](C)(C)OC[C@H]1O[C@@H](N2C=NC(C(=O)N([Si](C)(C)C)[Si](C)(C)C)=N2)[C@H](O[Si](C)(C)C)[C@@H]1O2473.9Semi standard non polar33892256
Ribavirin,4TMS,isomer #2C[Si](C)(C)OC[C@H]1O[C@@H](N2C=NC(C(=O)N([Si](C)(C)C)[Si](C)(C)C)=N2)[C@H](O[Si](C)(C)C)[C@@H]1O2518.5Standard non polar33892256
Ribavirin,4TMS,isomer #2C[Si](C)(C)OC[C@H]1O[C@@H](N2C=NC(C(=O)N([Si](C)(C)C)[Si](C)(C)C)=N2)[C@H](O[Si](C)(C)C)[C@@H]1O3227.9Standard polar33892256
Ribavirin,4TMS,isomer #3C[Si](C)(C)OC[C@H]1O[C@@H](N2C=NC(C(=O)N([Si](C)(C)C)[Si](C)(C)C)=N2)[C@H](O)[C@@H]1O[Si](C)(C)C2457.0Semi standard non polar33892256
Ribavirin,4TMS,isomer #3C[Si](C)(C)OC[C@H]1O[C@@H](N2C=NC(C(=O)N([Si](C)(C)C)[Si](C)(C)C)=N2)[C@H](O)[C@@H]1O[Si](C)(C)C2497.9Standard non polar33892256
Ribavirin,4TMS,isomer #3C[Si](C)(C)OC[C@H]1O[C@@H](N2C=NC(C(=O)N([Si](C)(C)C)[Si](C)(C)C)=N2)[C@H](O)[C@@H]1O[Si](C)(C)C3153.1Standard polar33892256
Ribavirin,4TMS,isomer #4C[Si](C)(C)O[C@@H]1[C@@H](CO)O[C@@H](N2C=NC(C(=O)N([Si](C)(C)C)[Si](C)(C)C)=N2)[C@@H]1O[Si](C)(C)C2451.6Semi standard non polar33892256
Ribavirin,4TMS,isomer #4C[Si](C)(C)O[C@@H]1[C@@H](CO)O[C@@H](N2C=NC(C(=O)N([Si](C)(C)C)[Si](C)(C)C)=N2)[C@@H]1O[Si](C)(C)C2511.5Standard non polar33892256
Ribavirin,4TMS,isomer #4C[Si](C)(C)O[C@@H]1[C@@H](CO)O[C@@H](N2C=NC(C(=O)N([Si](C)(C)C)[Si](C)(C)C)=N2)[C@@H]1O[Si](C)(C)C3159.8Standard polar33892256
Ribavirin,5TMS,isomer #1C[Si](C)(C)OC[C@H]1O[C@@H](N2C=NC(C(=O)N([Si](C)(C)C)[Si](C)(C)C)=N2)[C@H](O[Si](C)(C)C)[C@@H]1O[Si](C)(C)C2492.9Semi standard non polar33892256
Ribavirin,5TMS,isomer #1C[Si](C)(C)OC[C@H]1O[C@@H](N2C=NC(C(=O)N([Si](C)(C)C)[Si](C)(C)C)=N2)[C@H](O[Si](C)(C)C)[C@@H]1O[Si](C)(C)C2487.5Standard non polar33892256
Ribavirin,5TMS,isomer #1C[Si](C)(C)OC[C@H]1O[C@@H](N2C=NC(C(=O)N([Si](C)(C)C)[Si](C)(C)C)=N2)[C@H](O[Si](C)(C)C)[C@@H]1O[Si](C)(C)C2988.5Standard polar33892256
Ribavirin,1TBDMS,isomer #1CC(C)(C)[Si](C)(C)OC[C@H]1O[C@@H](N2C=NC(C(N)=O)=N2)[C@H](O)[C@@H]1O2695.5Semi standard non polar33892256
Ribavirin,1TBDMS,isomer #2CC(C)(C)[Si](C)(C)O[C@@H]1[C@@H](CO)O[C@@H](N2C=NC(C(N)=O)=N2)[C@@H]1O2657.3Semi standard non polar33892256
Ribavirin,1TBDMS,isomer #3CC(C)(C)[Si](C)(C)O[C@@H]1[C@H](O)[C@@H](CO)O[C@H]1N1C=NC(C(N)=O)=N12674.6Semi standard non polar33892256
Ribavirin,1TBDMS,isomer #4CC(C)(C)[Si](C)(C)NC(=O)C1=NN([C@@H]2O[C@H](CO)[C@@H](O)[C@H]2O)C=N12680.6Semi standard non polar33892256
Ribavirin,2TBDMS,isomer #1CC(C)(C)[Si](C)(C)OC[C@H]1O[C@@H](N2C=NC(C(N)=O)=N2)[C@H](O[Si](C)(C)C(C)(C)C)[C@@H]1O2884.4Semi standard non polar33892256
Ribavirin,2TBDMS,isomer #2CC(C)(C)[Si](C)(C)OC[C@H]1O[C@@H](N2C=NC(C(N)=O)=N2)[C@H](O)[C@@H]1O[Si](C)(C)C(C)(C)C2872.7Semi standard non polar33892256
Ribavirin,2TBDMS,isomer #3CC(C)(C)[Si](C)(C)NC(=O)C1=NN([C@@H]2O[C@H](CO[Si](C)(C)C(C)(C)C)[C@@H](O)[C@H]2O)C=N12912.0Semi standard non polar33892256
Ribavirin,2TBDMS,isomer #4CC(C)(C)[Si](C)(C)O[C@@H]1[C@@H](CO)O[C@@H](N2C=NC(C(N)=O)=N2)[C@@H]1O[Si](C)(C)C(C)(C)C2829.5Semi standard non polar33892256
Ribavirin,2TBDMS,isomer #5CC(C)(C)[Si](C)(C)NC(=O)C1=NN([C@@H]2O[C@H](CO)[C@@H](O[Si](C)(C)C(C)(C)C)[C@H]2O)C=N12895.9Semi standard non polar33892256
Ribavirin,2TBDMS,isomer #6CC(C)(C)[Si](C)(C)NC(=O)C1=NN([C@@H]2O[C@H](CO)[C@@H](O)[C@H]2O[Si](C)(C)C(C)(C)C)C=N12886.8Semi standard non polar33892256
Ribavirin,2TBDMS,isomer #7CC(C)(C)[Si](C)(C)N(C(=O)C1=NN([C@@H]2O[C@H](CO)[C@@H](O)[C@H]2O)C=N1)[Si](C)(C)C(C)(C)C2946.2Semi standard non polar33892256
Ribavirin,3TBDMS,isomer #1CC(C)(C)[Si](C)(C)OC[C@H]1O[C@@H](N2C=NC(C(N)=O)=N2)[C@H](O[Si](C)(C)C(C)(C)C)[C@@H]1O[Si](C)(C)C(C)(C)C3025.6Semi standard non polar33892256
Ribavirin,3TBDMS,isomer #2CC(C)(C)[Si](C)(C)NC(=O)C1=NN([C@@H]2O[C@H](CO[Si](C)(C)C(C)(C)C)[C@@H](O)[C@H]2O[Si](C)(C)C(C)(C)C)C=N13106.2Semi standard non polar33892256
Ribavirin,3TBDMS,isomer #3CC(C)(C)[Si](C)(C)NC(=O)C1=NN([C@@H]2O[C@H](CO[Si](C)(C)C(C)(C)C)[C@@H](O[Si](C)(C)C(C)(C)C)[C@H]2O)C=N13104.2Semi standard non polar33892256
Ribavirin,3TBDMS,isomer #4CC(C)(C)[Si](C)(C)OC[C@H]1O[C@@H](N2C=NC(C(=O)N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C)=N2)[C@H](O)[C@@H]1O3114.1Semi standard non polar33892256
Ribavirin,3TBDMS,isomer #5CC(C)(C)[Si](C)(C)NC(=O)C1=NN([C@@H]2O[C@H](CO)[C@@H](O[Si](C)(C)C(C)(C)C)[C@H]2O[Si](C)(C)C(C)(C)C)C=N13075.3Semi standard non polar33892256
Ribavirin,3TBDMS,isomer #6CC(C)(C)[Si](C)(C)O[C@@H]1[C@@H](CO)O[C@@H](N2C=NC(C(=O)N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C)=N2)[C@@H]1O3108.8Semi standard non polar33892256
Ribavirin,3TBDMS,isomer #7CC(C)(C)[Si](C)(C)O[C@@H]1[C@H](O)[C@@H](CO)O[C@H]1N1C=NC(C(=O)N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C)=N13107.3Semi standard non polar33892256
Ribavirin,4TBDMS,isomer #1CC(C)(C)[Si](C)(C)NC(=O)C1=NN([C@@H]2O[C@H](CO[Si](C)(C)C(C)(C)C)[C@@H](O[Si](C)(C)C(C)(C)C)[C@H]2O[Si](C)(C)C(C)(C)C)C=N13260.4Semi standard non polar33892256
Ribavirin,4TBDMS,isomer #1CC(C)(C)[Si](C)(C)NC(=O)C1=NN([C@@H]2O[C@H](CO[Si](C)(C)C(C)(C)C)[C@@H](O[Si](C)(C)C(C)(C)C)[C@H]2O[Si](C)(C)C(C)(C)C)C=N13107.1Standard non polar33892256
Ribavirin,4TBDMS,isomer #1CC(C)(C)[Si](C)(C)NC(=O)C1=NN([C@@H]2O[C@H](CO[Si](C)(C)C(C)(C)C)[C@@H](O[Si](C)(C)C(C)(C)C)[C@H]2O[Si](C)(C)C(C)(C)C)C=N13839.6Standard polar33892256
Ribavirin,4TBDMS,isomer #2CC(C)(C)[Si](C)(C)OC[C@H]1O[C@@H](N2C=NC(C(=O)N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C)=N2)[C@H](O[Si](C)(C)C(C)(C)C)[C@@H]1O3280.6Semi standard non polar33892256
Ribavirin,4TBDMS,isomer #2CC(C)(C)[Si](C)(C)OC[C@H]1O[C@@H](N2C=NC(C(=O)N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C)=N2)[C@H](O[Si](C)(C)C(C)(C)C)[C@@H]1O3247.9Standard non polar33892256
Ribavirin,4TBDMS,isomer #2CC(C)(C)[Si](C)(C)OC[C@H]1O[C@@H](N2C=NC(C(=O)N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C)=N2)[C@H](O[Si](C)(C)C(C)(C)C)[C@@H]1O3461.0Standard polar33892256
Ribavirin,4TBDMS,isomer #3CC(C)(C)[Si](C)(C)OC[C@H]1O[C@@H](N2C=NC(C(=O)N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C)=N2)[C@H](O)[C@@H]1O[Si](C)(C)C(C)(C)C3273.3Semi standard non polar33892256
Ribavirin,4TBDMS,isomer #3CC(C)(C)[Si](C)(C)OC[C@H]1O[C@@H](N2C=NC(C(=O)N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C)=N2)[C@H](O)[C@@H]1O[Si](C)(C)C(C)(C)C3238.2Standard non polar33892256
Ribavirin,4TBDMS,isomer #3CC(C)(C)[Si](C)(C)OC[C@H]1O[C@@H](N2C=NC(C(=O)N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C)=N2)[C@H](O)[C@@H]1O[Si](C)(C)C(C)(C)C3416.8Standard polar33892256
Ribavirin,4TBDMS,isomer #4CC(C)(C)[Si](C)(C)O[C@@H]1[C@@H](CO)O[C@@H](N2C=NC(C(=O)N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C)=N2)[C@@H]1O[Si](C)(C)C(C)(C)C3259.0Semi standard non polar33892256
Ribavirin,4TBDMS,isomer #4CC(C)(C)[Si](C)(C)O[C@@H]1[C@@H](CO)O[C@@H](N2C=NC(C(=O)N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C)=N2)[C@@H]1O[Si](C)(C)C(C)(C)C3252.5Standard non polar33892256
Ribavirin,4TBDMS,isomer #4CC(C)(C)[Si](C)(C)O[C@@H]1[C@@H](CO)O[C@@H](N2C=NC(C(=O)N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C)=N2)[C@@H]1O[Si](C)(C)C(C)(C)C3410.2Standard polar33892256
Ribavirin,5TBDMS,isomer #1CC(C)(C)[Si](C)(C)OC[C@H]1O[C@@H](N2C=NC(C(=O)N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C)=N2)[C@H](O[Si](C)(C)C(C)(C)C)[C@@H]1O[Si](C)(C)C(C)(C)C3407.2Semi standard non polar33892256
Ribavirin,5TBDMS,isomer #1CC(C)(C)[Si](C)(C)OC[C@H]1O[C@@H](N2C=NC(C(=O)N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C)=N2)[C@H](O[Si](C)(C)C(C)(C)C)[C@@H]1O[Si](C)(C)C(C)(C)C3352.9Standard non polar33892256
Ribavirin,5TBDMS,isomer #1CC(C)(C)[Si](C)(C)OC[C@H]1O[C@@H](N2C=NC(C(=O)N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C)=N2)[C@H](O[Si](C)(C)C(C)(C)C)[C@@H]1O[Si](C)(C)C(C)(C)C3356.2Standard polar33892256
Spectra

GC-MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted GC-MSPredicted GC-MS Spectrum - Ribavirin GC-MS (Non-derivatized) - 70eV, Positivesplash10-08nc-9320000000-385cc2e08cf140e0ecee2017-09-01Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Ribavirin GC-MS (3 TMS) - 70eV, Positivesplash10-0zpj-6922200000-75bb1d484addd27068ee2017-10-06Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Ribavirin GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Experimental LC-MS/MSLC-MS/MS Spectrum - Ribavirin LC-ESI-QFT , negative-QTOFsplash10-03di-0900000000-92e2bd11ded2c95f3fbd2017-09-14HMDB team, MONAView Spectrum
Experimental LC-MS/MSLC-MS/MS Spectrum - Ribavirin LC-ESI-QFT , negative-QTOFsplash10-03di-0900000000-109ebb69f722bb3a92d72017-09-14HMDB team, MONAView Spectrum
Experimental LC-MS/MSLC-MS/MS Spectrum - Ribavirin LC-ESI-QFT , negative-QTOFsplash10-03di-2900000000-c0d63d0633c304d466ca2017-09-14HMDB team, MONAView Spectrum
Experimental LC-MS/MSLC-MS/MS Spectrum - Ribavirin LC-ESI-QFT , negative-QTOFsplash10-03xr-5900000000-c6f13aea6e263f2557f42017-09-14HMDB team, MONAView Spectrum
Experimental LC-MS/MSLC-MS/MS Spectrum - Ribavirin LC-ESI-QFT , negative-QTOFsplash10-02t9-9500000000-cefa4afc53cf92b724c32017-09-14HMDB team, MONAView Spectrum
Experimental LC-MS/MSLC-MS/MS Spectrum - Ribavirin LC-ESI-QFT , negative-QTOFsplash10-014i-9200000000-3a87882b304f3a9c99952017-09-14HMDB team, MONAView Spectrum
Experimental LC-MS/MSLC-MS/MS Spectrum - Ribavirin LC-ESI-QFT , positive-QTOFsplash10-03di-0900000000-d5e98a470d0e674937d22017-09-14HMDB team, MONAView Spectrum
Experimental LC-MS/MSLC-MS/MS Spectrum - Ribavirin LC-ESI-QFT , positive-QTOFsplash10-03di-0900000000-c659efd26af31b3b98dc2017-09-14HMDB team, MONAView Spectrum
Experimental LC-MS/MSLC-MS/MS Spectrum - Ribavirin LC-ESI-QFT , positive-QTOFsplash10-03di-1900000000-56c00c62af197ae8eecb2017-09-14HMDB team, MONAView Spectrum
Experimental LC-MS/MSLC-MS/MS Spectrum - Ribavirin LC-ESI-QFT , positive-QTOFsplash10-03di-2900000000-aa387f940aedc4b698742017-09-14HMDB team, MONAView Spectrum
Experimental LC-MS/MSLC-MS/MS Spectrum - Ribavirin LC-ESI-QFT , positive-QTOFsplash10-03di-3900000000-795b88d3d651082dccb42017-09-14HMDB team, MONAView Spectrum
Experimental LC-MS/MSLC-MS/MS Spectrum - Ribavirin 75V, Negative-QTOFsplash10-02t9-9500000000-2ad23cf2e8f500d101cc2021-09-20HMDB team, MONAView Spectrum
Experimental LC-MS/MSLC-MS/MS Spectrum - Ribavirin 40V, Negative-QTOFsplash10-014l-9000000000-6a9ceaf94e48a5856e632021-09-20HMDB team, MONAView Spectrum
Experimental LC-MS/MSLC-MS/MS Spectrum - Ribavirin 10V, Negative-QTOFsplash10-03di-0900000000-18802a19d164544836302021-09-20HMDB team, MONAView Spectrum
Experimental LC-MS/MSLC-MS/MS Spectrum - Ribavirin 90V, Negative-QTOFsplash10-014i-9200000000-f26697f52243290160082021-09-20HMDB team, MONAView Spectrum
Experimental LC-MS/MSLC-MS/MS Spectrum - Ribavirin 20V, Negative-QTOFsplash10-03di-3900000000-03e82b27fd25878e95dc2021-09-20HMDB team, MONAView Spectrum
Experimental LC-MS/MSLC-MS/MS Spectrum - Ribavirin 10V, Negative-QTOFsplash10-03di-0900000000-85ef00069e1dea09445a2021-09-20HMDB team, MONAView Spectrum
Experimental LC-MS/MSLC-MS/MS Spectrum - Ribavirin 20V, Negative-QTOFsplash10-03di-3900000000-ec554c2067df2f7a90a52021-09-20HMDB team, MONAView Spectrum
Experimental LC-MS/MSLC-MS/MS Spectrum - Ribavirin 40V, Negative-QTOFsplash10-014l-9000000000-ab534ce4a5c6314c72082021-09-20HMDB team, MONAView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Ribavirin 10V, Positive-QTOFsplash10-03dj-1960000000-8e1936b4490afdea1b452016-06-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Ribavirin 20V, Positive-QTOFsplash10-03di-3900000000-34acc3537097bf33c4ec2016-06-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Ribavirin 40V, Positive-QTOFsplash10-01ot-9400000000-9e7ebf6d4e248ffbf3bb2016-06-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Ribavirin 10V, Negative-QTOFsplash10-03di-2900000000-1aad1437a8d8217dea0e2016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Ribavirin 20V, Negative-QTOFsplash10-03di-3900000000-0e379b4cf22b87e299552016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Ribavirin 40V, Negative-QTOFsplash10-0006-9100000000-0c0a02c5d745eb2131d72016-08-03Wishart LabView Spectrum

NMR Spectra

Spectrum TypeDescriptionDeposition DateSourceView
Predicted 1D NMR13C NMR Spectrum (1D, 100 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 100 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 1000 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 1000 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 200 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 200 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 300 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 300 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 400 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 400 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 500 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 500 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 600 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 600 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 700 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 700 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 800 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 800 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 900 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 900 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Biological Properties
Cellular Locations
  • Cytoplasm
  • Membrane
Biospecimen Locations
  • Blood
  • Urine
Tissue LocationsNot Available
Pathways
Normal Concentrations
BiospecimenStatusValueAgeSexConditionReferenceDetails
BloodExpected but not QuantifiedNot QuantifiedNot AvailableNot AvailableTaking drug identified by DrugBank entry DB00811 details
UrineExpected but not QuantifiedNot QuantifiedNot AvailableNot AvailableTaking drug identified by DrugBank entry DB00811 details
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDDB00811
Phenol Explorer Compound IDNot Available
FooDB IDNot Available
KNApSAcK IDNot Available
Chemspider ID34439
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkRibavirin
METLIN IDNot Available
PubChem Compound37542
PDB IDNot Available
ChEBI ID63580
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDNot Available
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General References
  1. Sidwell RW, Huffman JH, Khare GP, Allen LB, Witkowski JT, Robins RK: Broad-spectrum antiviral activity of Virazole: 1-beta-D-ribofuranosyl-1,2,4-triazole-3-carboxamide. Science. 1972 Aug 25;177(4050):705-6. [PubMed:4340949 ]
  2. Sidwell RW, Bailey KW, Wong MH, Barnard DL, Smee DF: In vitro and in vivo influenza virus-inhibitory effects of viramidine. Antiviral Res. 2005 Oct;68(1):10-7. [PubMed:16087250 ]
  3. Bani-Sadr F, Carrat F, Pol S, Hor R, Rosenthal E, Goujard C, Morand P, Lunel-Fabiani F, Salmon-Ceron D, Piroth L, Pialoux G, Bentata M, Cacoub P, Perronne C: Risk factors for symptomatic mitochondrial toxicity in HIV/hepatitis C virus-coinfected patients during interferon plus ribavirin-based therapy. J Acquir Immune Defic Syndr. 2005 Sep 1;40(1):47-52. [PubMed:16123681 ]
  4. Alvarez D, Dieterich DT, Brau N, Moorehead L, Ball L, Sulkowski MS: Zidovudine use but not weight-based ribavirin dosing impacts anaemia during HCV treatment in HIV-infected persons. J Viral Hepat. 2006 Oct;13(10):683-9. [PubMed:16970600 ]

Enzymes

General function:
Involved in catalytic activity
Specific function:
Involved primarily in ATP hydrolysis at the plasma membrane. Plays a role in regulating pyrophosphate levels, and functions in bone mineralization and soft tissue calcification. In vitro, has a broad specificity, hydrolyzing other nucleoside 5' triphosphates such as GTP, CTP, TTP and UTP to their corresponding monophosphates with release of pyrophosphate and diadenosine polyphosphates, and also 3',5'-cAMP to AMP. May also be involved in the regulation of the availability of nucleotide sugars in the endoplasmic reticulum and Golgi, and the regulation of purinergic signaling. Appears to modulate insulin sensitivity.
Gene Name:
ENPP1
Uniprot ID:
P22413
Molecular weight:
104923.58
References
  1. Overington JP, Al-Lazikani B, Hopkins AL: How many drug targets are there? Nat Rev Drug Discov. 2006 Dec;5(12):993-6. [PubMed:17139284 ]
  2. Imming P, Sinning C, Meyer A: Drugs, their targets and the nature and number of drug targets. Nat Rev Drug Discov. 2006 Oct;5(10):821-34. [PubMed:17016423 ]
General function:
Involved in adenosine kinase activity
Specific function:
ATP dependent phosphorylation of adenosine and other related nucleoside analogs to monophosphate derivatives. Serves as a potential regulator of concentrations of extracellular adenosine and intracellular adenine nucleotides.
Gene Name:
ADK
Uniprot ID:
P55263
Molecular weight:
38702.93
References
  1. Wu JZ, Larson G, Walker H, Shim JH, Hong Z: Phosphorylation of ribavirin and viramidine by adenosine kinase and cytosolic 5'-nucleotidase II: Implications for ribavirin metabolism in erythrocytes. Antimicrob Agents Chemother. 2005 Jun;49(6):2164-71. [PubMed:15917509 ]
  2. Kumarapperuma SC, Sun Y, Jeselnik M, Chung K, Parker WB, Jonsson CB, Arterburn JB: Structural effects on the phosphorylation of 3-substituted 1-beta-D-ribofuranosyl-1,2,4-triazoles by human adenosine kinase. Bioorg Med Chem Lett. 2007 Jun 1;17(11):3203-7. Epub 2007 Mar 12. [PubMed:17379518 ]
General function:
Involved in catalytic activity
Specific function:
Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Could also have a single-stranded nucleic acid-binding activity and could play a role in RNA and/or DNA metabolism. It may also have a role in the development of malignancy and the growth progression of some tumors.
Gene Name:
IMPDH1
Uniprot ID:
P20839
Molecular weight:
63252.24
References
  1. Chen X, Ji ZL, Chen YZ: TTD: Therapeutic Target Database. Nucleic Acids Res. 2002 Jan 1;30(1):412-5. [PubMed:11752352 ]
  2. Gish RG: Treating HCV with ribavirin analogues and ribavirin-like molecules. J Antimicrob Chemother. 2006 Jan;57(1):8-13. Epub 2005 Nov 17. [PubMed:16293677 ]
  3. McHutchison JG, Shiffman ML, Cheung RC, Gordon SC, Wright TL, Pottage JC Jr, McNair L, Ette E, Moseley S, Alam J: A randomized, double-blind, placebo-controlled dose-escalation trial of merimepodib (VX-497) and interferon-alpha in previously untreated patients with chronic hepatitis C. Antivir Ther. 2005;10(5):635-43. [PubMed:16152757 ]
  4. Leyssen P, De Clercq E, Neyts J: The anti-yellow fever virus activity of ribavirin is independent of error-prone replication. Mol Pharmacol. 2006 Apr;69(4):1461-7. Epub 2006 Jan 18. [PubMed:16421290 ]
General function:
Involved in 5'-nucleotidase activity
Specific function:
May have a critical role in the maintenance of a constant composition of intracellular purine/pyrimidine nucleotides in cooperation with other nucleotidases. Preferentially hydrolyzes inosine 5'-monophosphate (IMP) and other purine nucleotides.
Gene Name:
NT5C2
Uniprot ID:
P49902
Molecular weight:
64969.2
References
  1. Overington JP, Al-Lazikani B, Hopkins AL: How many drug targets are there? Nat Rev Drug Discov. 2006 Dec;5(12):993-6. [PubMed:17139284 ]
  2. Imming P, Sinning C, Meyer A: Drugs, their targets and the nature and number of drug targets. Nat Rev Drug Discov. 2006 Oct;5(10):821-34. [PubMed:17016423 ]

Transporters

General function:
Involved in nucleoside transmembrane transporter activity
Specific function:
Mediates both influx and efflux of nucleosides across the membrane (equilibrative transporter). It is sensitive (ES) to low concentrations of the inhibitor nitrobenzylmercaptopurine riboside (NBMPR) and is sodium-independent. It has a higher affinity for adenosine. Inhibited by dipyridamole and dilazep (anticancer chemotherapeutics drugs)
Gene Name:
SLC29A1
Uniprot ID:
Q99808
Molecular weight:
50218.8
References
  1. Yamamoto T, Sugawara M, Kikukawa T, Miyauchi S, Yamaguchi M, Tero A, Takagi S, Nakagaki T: Kinetic study of anti-viral ribavirin uptake mediated by hCNT3 and hENT1 in Xenopus laevis oocytes. Biophys Chem. 2010 Mar;147(1-2):59-65. doi: 10.1016/j.bpc.2009.12.012. Epub 2010 Jan 6. [PubMed:20096989 ]
  2. Fukuchi Y, Furihata T, Hashizume M, Iikura M, Chiba K: Characterization of ribavirin uptake systems in human hepatocytes. J Hepatol. 2010 Apr;52(4):486-92. doi: 10.1016/j.jhep.2010.01.011. Epub 2010 Feb 4. [PubMed:20185188 ]
General function:
Involved in nucleoside:sodium symporter activity
Specific function:
Sodium-dependent, pyrimidine- and purine-selective. Involved in the homeostasis of endogenous nucleosides. Exhibits the transport characteristics of the nucleoside transport system cib or N3 subtype (N3/cib) (with marked transport of both thymidine and inosine). Employs a 2:1 sodium/nucleoside ratio. Also able to transport gemcitabine, 3'-azido-3'-deoxythymidine (AZT), ribavirin and 3-deazauridine
Gene Name:
SLC28A3
Uniprot ID:
Q9HAS3
Molecular weight:
76929.6
References
  1. Yamamoto T, Sugawara M, Kikukawa T, Miyauchi S, Yamaguchi M, Tero A, Takagi S, Nakagaki T: Kinetic study of anti-viral ribavirin uptake mediated by hCNT3 and hENT1 in Xenopus laevis oocytes. Biophys Chem. 2010 Mar;147(1-2):59-65. doi: 10.1016/j.bpc.2009.12.012. Epub 2010 Jan 6. [PubMed:20096989 ]