Hmdb loader
Record Information
Version5.0
StatusExpected but not Quantified
Creation Date2012-09-11 17:30:36 UTC
Update Date2023-02-21 17:18:47 UTC
HMDB IDHMDB0029472
Secondary Accession Numbers
  • HMDB29472
Metabolite Identification
Common NameIsoeugenitol
DescriptionIsoeugenitol belongs to the class of organic compounds known as chromones. Chromones are compounds containing a benzopyran-4-one moiety. Based on a literature review very few articles have been published on Isoeugenitol.
Structure
Data?1676999927
Synonyms
ValueSource
5,7-Dihydroxy-2,8-dimethylchromoneHMDB
5-Benzyl-5-(3-pyridinyl)-2,4-imidazolidinedioneHMDB
5-BENZYL-5-(3-pyridyl)hydantoinHMDB
Chemical FormulaC11H10O4
Average Molecular Weight206.1947
Monoisotopic Molecular Weight206.057908808
IUPAC Name5,7-dihydroxy-2,8-dimethyl-4H-chromen-4-one
Traditional Name5,7-dihydroxy-2,8-dimethylchromen-4-one
CAS Registry Number479-06-1
SMILES
CC1=CC(=O)C2=C(O)C=C(O)C(C)=C2O1
InChI Identifier
InChI=1S/C11H10O4/c1-5-3-8(13)10-9(14)4-7(12)6(2)11(10)15-5/h3-4,12,14H,1-2H3
InChI KeyXSSGQRFNGHRFBC-UHFFFAOYSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as chromones. Chromones are compounds containing a benzopyran-4-one moiety.
KingdomOrganic compounds
Super ClassOrganoheterocyclic compounds
ClassBenzopyrans
Sub Class1-benzopyrans
Direct ParentChromones
Alternative Parents
Substituents
  • Chromone
  • 1-hydroxy-2-unsubstituted benzenoid
  • Pyranone
  • Benzenoid
  • Pyran
  • Heteroaromatic compound
  • Vinylogous acid
  • Oxacycle
  • Organic oxygen compound
  • Organic oxide
  • Hydrocarbon derivative
  • Organooxygen compound
  • Aromatic heteropolycyclic compound
Molecular FrameworkAromatic heteropolycyclic compounds
External DescriptorsNot Available
Ontology
Physiological effectNot Available
Disposition
ProcessNot Available
RoleNot Available
Physical Properties
StateSolid
Experimental Molecular Properties
PropertyValueReference
Melting Point229 - 230 °CNot Available
Boiling PointNot AvailableNot Available
Water Solubility834.7 mg/L @ 25 °C (est)The Good Scents Company Information System
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
Water Solubility1.83 g/LALOGPS
logP1.9ALOGPS
logP2.43ChemAxon
logS-2ALOGPS
pKa (Strongest Acidic)7.04ChemAxon
pKa (Strongest Basic)-5.1ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count4ChemAxon
Hydrogen Donor Count2ChemAxon
Polar Surface Area66.76 ŲChemAxon
Rotatable Bond Count0ChemAxon
Refractivity56.11 m³·mol⁻¹ChemAxon
Polarizability20.46 ųChemAxon
Number of Rings2ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterYesChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DeepCCS[M+H]+145.93630932474
DeepCCS[M-H]-143.57830932474
DeepCCS[M-2H]-177.35430932474
DeepCCS[M+Na]+152.21830932474
AllCCS[M+H]+142.032859911
AllCCS[M+H-H2O]+137.732859911
AllCCS[M+NH4]+146.132859911
AllCCS[M+Na]+147.232859911
AllCCS[M-H]-142.332859911
AllCCS[M+Na-2H]-142.232859911
AllCCS[M+HCOO]-142.332859911

Predicted Kovats Retention Indices

Underivatized

MetaboliteSMILESKovats RI ValueColumn TypeReference
IsoeugenitolCC1=CC(=O)C2=C(O)C=C(O)C(C)=C2O13069.7Standard polar33892256
IsoeugenitolCC1=CC(=O)C2=C(O)C=C(O)C(C)=C2O12038.9Standard non polar33892256
IsoeugenitolCC1=CC(=O)C2=C(O)C=C(O)C(C)=C2O11996.5Semi standard non polar33892256

Derivatized

Derivative Name / StructureSMILESKovats RI ValueColumn TypeReference
Isoeugenitol,1TMS,isomer #1CC1=CC(=O)C2=C(O[Si](C)(C)C)C=C(O)C(C)=C2O12164.1Semi standard non polar33892256
Isoeugenitol,1TMS,isomer #2CC1=CC(=O)C2=C(O)C=C(O[Si](C)(C)C)C(C)=C2O12167.6Semi standard non polar33892256
Isoeugenitol,2TMS,isomer #1CC1=CC(=O)C2=C(O[Si](C)(C)C)C=C(O[Si](C)(C)C)C(C)=C2O12240.7Semi standard non polar33892256
Isoeugenitol,1TBDMS,isomer #1CC1=CC(=O)C2=C(O[Si](C)(C)C(C)(C)C)C=C(O)C(C)=C2O12422.9Semi standard non polar33892256
Isoeugenitol,1TBDMS,isomer #2CC1=CC(=O)C2=C(O)C=C(O[Si](C)(C)C(C)(C)C)C(C)=C2O12435.3Semi standard non polar33892256
Isoeugenitol,2TBDMS,isomer #1CC1=CC(=O)C2=C(O[Si](C)(C)C(C)(C)C)C=C(O[Si](C)(C)C(C)(C)C)C(C)=C2O12699.1Semi standard non polar33892256
Spectra

GC-MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted GC-MSPredicted GC-MS Spectrum - Isoeugenitol GC-MS (Non-derivatized) - 70eV, Positivesplash10-0bvr-0920000000-c94c28ce68641cfcac0f2017-09-01Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Isoeugenitol GC-MS (2 TMS) - 70eV, Positivesplash10-009i-3395000000-cffe0baf646b92337de82017-10-06Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Isoeugenitol GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Isoeugenitol GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Isoeugenitol 10V, Positive-QTOFsplash10-0a4i-0290000000-3efa17be4b9f7976f7732016-08-01Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Isoeugenitol 20V, Positive-QTOFsplash10-0a4i-0790000000-023b9a1454d85460125d2016-08-01Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Isoeugenitol 40V, Positive-QTOFsplash10-00kk-4900000000-deca50087728c8703b982016-08-01Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Isoeugenitol 10V, Negative-QTOFsplash10-0a4i-0090000000-0c314f7d313dfdc007982016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Isoeugenitol 20V, Negative-QTOFsplash10-0a4i-0390000000-012731caf09b35bd9c4e2016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Isoeugenitol 40V, Negative-QTOFsplash10-00dr-6900000000-2c1a74fbc1bc6b3acc612016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Isoeugenitol 10V, Negative-QTOFsplash10-0a4i-0090000000-99c859898d8c3407680e2021-09-23Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Isoeugenitol 20V, Negative-QTOFsplash10-0a4i-0190000000-807eb9dc076218a4ab362021-09-23Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Isoeugenitol 40V, Negative-QTOFsplash10-01bc-5900000000-1a9d8005b7acef892f282021-09-23Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Isoeugenitol 10V, Positive-QTOFsplash10-0a4i-0090000000-d59b09fd60f8eef417932021-09-25Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Isoeugenitol 20V, Positive-QTOFsplash10-0a4i-0290000000-f7836032920b261733112021-09-25Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Isoeugenitol 40V, Positive-QTOFsplash10-01p9-2900000000-fef5365e4092a5610fe22021-09-25Wishart LabView Spectrum

IR Spectra

Spectrum TypeDescriptionDeposition DateSourceView
Predicted IR SpectrumIR Ion Spectrum (Predicted IRIS Spectrum, Adduct: [M-H]-)2023-02-03FELIX labView Spectrum
Predicted IR SpectrumIR Ion Spectrum (Predicted IRIS Spectrum, Adduct: [M+H]+)2023-02-03FELIX labView Spectrum
Predicted IR SpectrumIR Ion Spectrum (Predicted IRIS Spectrum, Adduct: [M+Na]+)2023-02-03FELIX labView Spectrum
Biological Properties
Cellular Locations
  • Cytoplasm
  • Extracellular
Biospecimen LocationsNot Available
Tissue LocationsNot Available
Pathways
Normal Concentrations
Not Available
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDFDB000594
KNApSAcK IDC00050927
Chemspider ID4477104
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound5318562
PDB IDNot Available
ChEBI ID895319
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDrw1809721
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General References
  1. (). Yannai, Shmuel. (2004) Dictionary of food compounds with CD-ROM: Additives, flavors, and ingredients. Boca Raton: Chapman & Hall/CRC.. .