Hmdb loader
Record Information
Version5.0
StatusExpected but not Quantified
Creation Date2012-09-11 17:33:09 UTC
Update Date2022-03-07 02:52:19 UTC
HMDB IDHMDB0029869
Secondary Accession Numbers
  • HMDB29869
Metabolite Identification
Common NameHemiariensin
DescriptionHemiariensin belongs to the class of organic compounds known as dibenzylbutane lignans. These are lignan compounds containing a 2,3-dibenzylbutane moiety. Based on a literature review very few articles have been published on Hemiariensin.
Structure
Data?1563861904
Synonyms
ValueSource
2,3-Bis[(2H-1,3-benzodioxol-5-yl)methyl]-4-hydroxybutyl acetic acidHMDB
Chemical FormulaC22H24O7
Average Molecular Weight400.4218
Monoisotopic Molecular Weight400.152203122
IUPAC Name2,3-bis(2H-1,3-benzodioxol-5-ylmethyl)-4-hydroxybutyl acetate
Traditional Name2,3-bis(2H-1,3-benzodioxol-5-ylmethyl)-4-hydroxybutyl acetate
CAS Registry Number112448-60-9
SMILES
CC(=O)OCC(CC1=CC2=C(OCO2)C=C1)C(CO)CC1=CC2=C(OCO2)C=C1
InChI Identifier
InChI=1S/C22H24O7/c1-14(24)25-11-18(7-16-3-5-20-22(9-16)29-13-27-20)17(10-23)6-15-2-4-19-21(8-15)28-12-26-19/h2-5,8-9,17-18,23H,6-7,10-13H2,1H3
InChI KeyZSECDNBADLTTJC-UHFFFAOYSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as dibenzylbutane lignans. These are lignan compounds containing a 2,3-dibenzylbutane moiety.
KingdomOrganic compounds
Super ClassLignans, neolignans and related compounds
ClassDibenzylbutane lignans
Sub ClassNot Available
Direct ParentDibenzylbutane lignans
Alternative Parents
Substituents
  • Dibenzylbutane lignan skeleton
  • Benzodioxole
  • Benzenoid
  • Carboxylic acid ester
  • Acetal
  • Carboxylic acid derivative
  • Monocarboxylic acid or derivatives
  • Oxacycle
  • Organoheterocyclic compound
  • Hydrocarbon derivative
  • Organic oxide
  • Alcohol
  • Organooxygen compound
  • Primary alcohol
  • Organic oxygen compound
  • Carbonyl group
  • Aromatic heteropolycyclic compound
Molecular FrameworkAromatic heteropolycyclic compounds
External DescriptorsNot Available
Ontology
Physiological effectNot Available
Disposition
ProcessNot Available
RoleNot Available
Physical Properties
StateNot Available
Experimental Molecular Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water Solubility0.85 mg/L @ 25 °C (est)The Good Scents Company Information System
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
Water Solubility0.01 g/LALOGPS
logP2.72ALOGPS
logP2.94ChemAxon
logS-4.6ALOGPS
pKa (Strongest Acidic)15.45ChemAxon
pKa (Strongest Basic)-2.6ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count6ChemAxon
Hydrogen Donor Count1ChemAxon
Polar Surface Area83.45 ŲChemAxon
Rotatable Bond Count9ChemAxon
Refractivity103.08 m³·mol⁻¹ChemAxon
Polarizability41.98 ųChemAxon
Number of Rings4ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterYesChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleYesChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DarkChem[M+H]+193.87131661259
DarkChem[M-H]-194.91931661259
DeepCCS[M+H]+190.19630932474
DeepCCS[M-H]-187.83830932474
DeepCCS[M-2H]-221.85330932474
DeepCCS[M+Na]+197.0830932474
AllCCS[M+H]+195.432859911
AllCCS[M+H-H2O]+192.632859911
AllCCS[M+NH4]+198.032859911
AllCCS[M+Na]+198.732859911
AllCCS[M-H]-198.332859911
AllCCS[M+Na-2H]-198.632859911
AllCCS[M+HCOO]-199.032859911

Predicted Kovats Retention Indices

Underivatized

MetaboliteSMILESKovats RI ValueColumn TypeReference
HemiariensinCC(=O)OCC(CC1=CC2=C(OCO2)C=C1)C(CO)CC1=CC2=C(OCO2)C=C14190.6Standard polar33892256
HemiariensinCC(=O)OCC(CC1=CC2=C(OCO2)C=C1)C(CO)CC1=CC2=C(OCO2)C=C13025.5Standard non polar33892256
HemiariensinCC(=O)OCC(CC1=CC2=C(OCO2)C=C1)C(CO)CC1=CC2=C(OCO2)C=C13179.1Semi standard non polar33892256

Derivatized

Derivative Name / StructureSMILESKovats RI ValueColumn TypeReference
Hemiariensin,1TMS,isomer #1CC(=O)OCC(CC1=CC=C2OCOC2=C1)C(CO[Si](C)(C)C)CC1=CC=C2OCOC2=C13114.1Semi standard non polar33892256
Hemiariensin,1TBDMS,isomer #1CC(=O)OCC(CC1=CC=C2OCOC2=C1)C(CO[Si](C)(C)C(C)(C)C)CC1=CC=C2OCOC2=C13386.2Semi standard non polar33892256
Spectra

GC-MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted GC-MSPredicted GC-MS Spectrum - Hemiariensin GC-MS (Non-derivatized) - 70eV, Positivesplash10-000i-3916000000-f8aaf69806e04f5fb2b82017-09-01Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Hemiariensin GC-MS (1 TMS) - 70eV, Positivesplash10-0f79-9635300000-42fcbf439ba39f903da82017-10-06Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Hemiariensin GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Hemiariensin GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Hemiariensin 10V, Positive-QTOFsplash10-0ul3-0019300000-7f378012b02db025e83b2016-08-01Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Hemiariensin 20V, Positive-QTOFsplash10-03ml-2879000000-f3a4084d42370a2077012016-08-01Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Hemiariensin 40V, Positive-QTOFsplash10-07vm-0197000000-1b96ee2252e25856a6e82016-08-01Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Hemiariensin 10V, Negative-QTOFsplash10-0002-2009000000-69bdd2ed73f7c8e4b1ed2016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Hemiariensin 20V, Negative-QTOFsplash10-0a4i-7109000000-c96f008712e872c937fe2016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Hemiariensin 40V, Negative-QTOFsplash10-0a4i-9202000000-b2ec3bd860431eb061ca2016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Hemiariensin 10V, Negative-QTOFsplash10-0a4s-0009000000-f06b34857ffc8b04c58e2021-09-23Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Hemiariensin 20V, Negative-QTOFsplash10-0a4i-9002000000-496f390171c40c3d5db62021-09-23Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Hemiariensin 40V, Negative-QTOFsplash10-0a4m-9311000000-fcfe91d75eaea9528dc42021-09-23Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Hemiariensin 10V, Positive-QTOFsplash10-0h2f-0019100000-b06ea6aa3dbc592725b02021-09-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Hemiariensin 20V, Positive-QTOFsplash10-03k9-0009000000-7d706f62874acfc8a9372021-09-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Hemiariensin 40V, Positive-QTOFsplash10-03kc-1339000000-823bdd7cebb36944e3a72021-09-24Wishart LabView Spectrum
Biological Properties
Cellular Locations
  • Membrane
Biospecimen LocationsNot Available
Tissue LocationsNot Available
Pathways
Normal Concentrations
Not Available
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDFDB001098
KNApSAcK IDC00056481
Chemspider ID35013095
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound13939341
PDB IDNot Available
ChEBI ID172639
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDrw1811871
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General References
  1. (). Yannai, Shmuel. (2004) Dictionary of food compounds with CD-ROM: Additives, flavors, and ingredients. Boca Raton: Chapman & Hall/CRC.. .