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Record Information
Version5.0
StatusExpected but not Quantified
Creation Date2012-09-11 17:35:09 UTC
Update Date2022-03-07 02:52:27 UTC
HMDB IDHMDB0030160
Secondary Accession Numbers
  • HMDB30160
Metabolite Identification
Common NameNatsudaidain
DescriptionNatsudaidain belongs to the class of organic compounds known as flavonols. Flavonols are compounds that contain a flavone (2-phenyl-1-benzopyran-4-one) backbone carrying a hydroxyl group at the 3-position. Thus, natsudaidain is considered to be a flavonoid. Based on a literature review a significant number of articles have been published on Natsudaidain.
Structure
Data?1563861946
Synonyms
ValueSource
3-HydroxynobiletinHMDB
2-(3,4-Dimethoxyphenyl)-3-hydroxy-5,6,7,8-tetramethoxy-4H-1-benzopyran-4-oneHMDB
3',4',5,6,7,8-HexamethoxyflavonolHMDB
3-Hydroxy-3',4',5,6,7,8-hexamethoxyflavoneHMDB
3-Hydroxy-5,6,7,8,3',4'-hexamethoxyflavoneHMDB
Chemical FormulaC21H22O9
Average Molecular Weight418.394
Monoisotopic Molecular Weight418.126382302
IUPAC Name2-(3,4-dimethoxyphenyl)-3-hydroxy-5,6,7,8-tetramethoxy-4H-chromen-4-one
Traditional Namenatsudaidain
CAS Registry Number35154-55-3
SMILES
COC1=C(OC)C=C(C=C1)C1=C(O)C(=O)C2=C(OC)C(OC)=C(OC)C(OC)=C2O1
InChI Identifier
InChI=1S/C21H22O9/c1-24-11-8-7-10(9-12(11)25-2)16-15(23)14(22)13-17(26-3)19(27-4)21(29-6)20(28-5)18(13)30-16/h7-9,23H,1-6H3
InChI KeyCCJBNIRSVUKABH-UHFFFAOYSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as flavonols. Flavonols are compounds that contain a flavone (2-phenyl-1-benzopyran-4-one) backbone carrying a hydroxyl group at the 3-position.
KingdomOrganic compounds
Super ClassPhenylpropanoids and polyketides
ClassFlavonoids
Sub ClassFlavones
Direct ParentFlavonols
Alternative Parents
Substituents
  • 3p-methoxyflavonoid-skeleton
  • 4p-methoxyflavonoid-skeleton
  • 5-methoxyflavonoid-skeleton
  • 6-methoxyflavonoid-skeleton
  • 7-methoxyflavonoid-skeleton
  • 8-methoxyflavonoid-skeleton
  • 3-hydroxyflavone
  • 3-hydroxyflavonoid
  • Hydroxyflavonoid
  • Chromone
  • O-dimethoxybenzene
  • Dimethoxybenzene
  • Benzopyran
  • 1-benzopyran
  • Phenoxy compound
  • Methoxybenzene
  • Anisole
  • Phenol ether
  • Alkyl aryl ether
  • Pyranone
  • Benzenoid
  • Monocyclic benzene moiety
  • Pyran
  • Vinylogous ester
  • Heteroaromatic compound
  • Ether
  • Organoheterocyclic compound
  • Oxacycle
  • Organic oxide
  • Organic oxygen compound
  • Organooxygen compound
  • Hydrocarbon derivative
  • Aromatic heteropolycyclic compound
Molecular FrameworkAromatic heteropolycyclic compounds
External Descriptors
Ontology
Physiological effectNot Available
Disposition
ProcessNot Available
RoleNot Available
Physical Properties
StateSolid
Experimental Molecular Properties
PropertyValueReference
Melting Point154 - 156 °CNot Available
Boiling PointNot AvailableNot Available
Water Solubility60.76 mg/L @ 25 °C (est)The Good Scents Company Information System
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
Water Solubility0.033 g/LALOGPS
logP1.54ALOGPS
logP1.77ChemAxon
logS-4.1ALOGPS
pKa (Strongest Acidic)8.65ChemAxon
pKa (Strongest Basic)-3.9ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count9ChemAxon
Hydrogen Donor Count1ChemAxon
Polar Surface Area101.91 ŲChemAxon
Rotatable Bond Count7ChemAxon
Refractivity107.72 m³·mol⁻¹ChemAxon
Polarizability42.59 ųChemAxon
Number of Rings3ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterYesChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleYesChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DarkChem[M+H]+199.29431661259
DarkChem[M-H]-196.96131661259
DeepCCS[M+H]+192.62730932474
DeepCCS[M-H]-190.26930932474
DeepCCS[M-2H]-223.81930932474
DeepCCS[M+Na]+199.04730932474
AllCCS[M+H]+197.332859911
AllCCS[M+H-H2O]+194.532859911
AllCCS[M+NH4]+199.832859911
AllCCS[M+Na]+200.532859911
AllCCS[M-H]-202.032859911
AllCCS[M+Na-2H]-202.232859911
AllCCS[M+HCOO]-202.632859911

Predicted Kovats Retention Indices

Underivatized

MetaboliteSMILESKovats RI ValueColumn TypeReference
NatsudaidainCOC1=C(OC)C=C(C=C1)C1=C(O)C(=O)C2=C(OC)C(OC)=C(OC)C(OC)=C2O14875.9Standard polar33892256
NatsudaidainCOC1=C(OC)C=C(C=C1)C1=C(O)C(=O)C2=C(OC)C(OC)=C(OC)C(OC)=C2O13420.5Standard non polar33892256
NatsudaidainCOC1=C(OC)C=C(C=C1)C1=C(O)C(=O)C2=C(OC)C(OC)=C(OC)C(OC)=C2O13419.5Semi standard non polar33892256

Derivatized

Derivative Name / StructureSMILESKovats RI ValueColumn TypeReference
Natsudaidain,1TMS,isomer #1COC1=CC=C(C2=C(O[Si](C)(C)C)C(=O)C3=C(OC)C(OC)=C(OC)C(OC)=C3O2)C=C1OC3267.4Semi standard non polar33892256
Natsudaidain,1TBDMS,isomer #1COC1=CC=C(C2=C(O[Si](C)(C)C(C)(C)C)C(=O)C3=C(OC)C(OC)=C(OC)C(OC)=C3O2)C=C1OC3468.5Semi standard non polar33892256
Spectra

GC-MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted GC-MSPredicted GC-MS Spectrum - Natsudaidain GC-MS (Non-derivatized) - 70eV, Positivesplash10-0udr-0229500000-6142359c38ec4c99ca662017-09-01Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Natsudaidain GC-MS (1 TMS) - 70eV, Positivesplash10-00b9-1020900000-9f01294b5500f826afb22017-10-06Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Natsudaidain GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Natsudaidain 10V, Positive-QTOFsplash10-014i-0000900000-cebf996916eed716f4a72016-06-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Natsudaidain 20V, Positive-QTOFsplash10-014i-0001900000-559bb71da0d07078ab652016-06-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Natsudaidain 40V, Positive-QTOFsplash10-01vo-0049000000-6ca0612f657588bb0e972016-06-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Natsudaidain 10V, Negative-QTOFsplash10-014i-0000900000-377f417dc661a840c7a32016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Natsudaidain 20V, Negative-QTOFsplash10-014i-0006900000-1ce98de204f80184a2ad2016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Natsudaidain 40V, Negative-QTOFsplash10-00fr-0129000000-12c7f4bfbe9ec5dad4332016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Natsudaidain 10V, Positive-QTOFsplash10-014i-0000900000-a12148ee24803ea188362021-09-23Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Natsudaidain 20V, Positive-QTOFsplash10-014i-0000900000-3f12bcf9a15b3df770012021-09-23Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Natsudaidain 40V, Positive-QTOFsplash10-00kf-2091300000-7a1e713cc1e2d20c0ca02021-09-23Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Natsudaidain 10V, Negative-QTOFsplash10-014i-0000900000-e495c4144a3aee33a6012021-09-25Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Natsudaidain 20V, Negative-QTOFsplash10-014i-0051900000-65aa614e14027c092abf2021-09-25Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Natsudaidain 40V, Negative-QTOFsplash10-0079-2893100000-570666d7033384cbe19b2021-09-25Wishart LabView Spectrum
Biological Properties
Cellular Locations
  • Cytoplasm
  • Extracellular
Biospecimen LocationsNot Available
Tissue LocationsNot Available
Pathways
Normal Concentrations
Not Available
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound ID391
FooDB IDFDB001969
KNApSAcK IDC00004803
Chemspider ID2341642
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNatsudaidain
METLIN IDNot Available
PubChem Compound3084605
PDB IDNot Available
ChEBI ID479532
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDrw1817511
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General References
  1. Neveu V, Perez-Jimenez J, Vos F, Crespy V, du Chaffaut L, Mennen L, Knox C, Eisner R, Cruz J, Wishart D, Scalbert A: Phenol-Explorer: an online comprehensive database on polyphenol contents in foods. Database (Oxford). 2010;2010:bap024. doi: 10.1093/database/bap024. Epub 2010 Jan 8. [PubMed:20428313 ]
  2. (). Yannai, Shmuel. (2004) Dictionary of food compounds with CD-ROM: Additives, flavors, and ingredients. Boca Raton: Chapman & Hall/CRC.. .