Hmdb loader
Record Information
Version5.0
StatusExpected but not Quantified
Creation Date2012-09-11 17:42:25 UTC
Update Date2023-02-21 17:20:26 UTC
HMDB IDHMDB0031341
Secondary Accession Numbers
  • HMDB31341
Metabolite Identification
Common NameCyclododecanone
DescriptionCyclododecanone belongs to the class of organic compounds known as cyclic ketones. These are organic compounds containing a ketone that is conjugated to a cyclic moiety. Based on a literature review very few articles have been published on Cyclododecanone.
Structure
Data?1677000026
SynonymsNot Available
Chemical FormulaC12H22O
Average Molecular Weight182.3025
Monoisotopic Molecular Weight182.167065326
IUPAC Namecyclododecanone
Traditional Namecyclododecanone
CAS Registry Number830-13-7
SMILES
O=C1CCCCCCCCCCC1
InChI Identifier
InChI=1S/C12H22O/c13-12-10-8-6-4-2-1-3-5-7-9-11-12/h1-11H2
InChI KeySXVPOSFURRDKBO-UHFFFAOYSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as cyclic ketones. These are organic compounds containing a ketone that is conjugated to a cyclic moiety.
KingdomOrganic compounds
Super ClassOrganic oxygen compounds
ClassOrganooxygen compounds
Sub ClassCarbonyl compounds
Direct ParentCyclic ketones
Alternative Parents
Substituents
  • Cyclic ketone
  • Organic oxide
  • Hydrocarbon derivative
  • Aliphatic homomonocyclic compound
Molecular FrameworkAliphatic homomonocyclic compounds
External DescriptorsNot Available
Ontology
Physiological effectNot Available
Disposition
ProcessNot Available
RoleNot Available
Physical Properties
StateSolid
Experimental Molecular Properties
PropertyValueReference
Melting Point59 °CNot Available
Boiling PointNot AvailableNot Available
Water Solubility16.91 mg/L @ 25 °C (est)The Good Scents Company Information System
LogP4.10Not Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
Water Solubility0.0073 g/LALOGPS
logP4.45ALOGPS
logP4.16ChemAxon
logS-4.4ALOGPS
pKa (Strongest Basic)-7.3ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count1ChemAxon
Hydrogen Donor Count0ChemAxon
Polar Surface Area17.07 ŲChemAxon
Rotatable Bond Count0ChemAxon
Refractivity55.85 m³·mol⁻¹ChemAxon
Polarizability22.77 ųChemAxon
Number of Rings1ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterYesChemAxon
Veber's RuleYesChemAxon
MDDR-like RuleNoChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DarkChem[M+H]+142.16431661259
DarkChem[M-H]-139.21931661259
DeepCCS[M+H]+151.77330932474
DeepCCS[M-H]-149.17230932474
DeepCCS[M-2H]-185.030932474
DeepCCS[M+Na]+160.57430932474
AllCCS[M+H]+143.132859911
AllCCS[M+H-H2O]+138.932859911
AllCCS[M+NH4]+147.032859911
AllCCS[M+Na]+148.232859911
AllCCS[M-H]-147.132859911
AllCCS[M+Na-2H]-148.132859911
AllCCS[M+HCOO]-149.332859911

Predicted Kovats Retention Indices

Underivatized

MetaboliteSMILESKovats RI ValueColumn TypeReference
CyclododecanoneO=C1CCCCCCCCCCC11968.3Standard polar33892256
CyclododecanoneO=C1CCCCCCCCCCC11560.6Standard non polar33892256
CyclododecanoneO=C1CCCCCCCCCCC11569.8Semi standard non polar33892256

Derivatized

Derivative Name / StructureSMILESKovats RI ValueColumn TypeReference
Cyclododecanone,1TMS,isomer #1C[Si](C)(C)OC1=CCCCCCCCCCC11663.1Semi standard non polar33892256
Cyclododecanone,1TMS,isomer #1C[Si](C)(C)OC1=CCCCCCCCCCC11652.8Standard non polar33892256
Cyclododecanone,1TBDMS,isomer #1CC(C)(C)[Si](C)(C)OC1=CCCCCCCCCCC11917.7Semi standard non polar33892256
Cyclododecanone,1TBDMS,isomer #1CC(C)(C)[Si](C)(C)OC1=CCCCCCCCCCC11785.3Standard non polar33892256
Spectra

GC-MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Experimental GC-MSGC-MS Spectrum - Cyclododecanone EI-B (Non-derivatized)splash10-0a4l-9100000000-9ec8a117768df777e2ed2017-09-12HMDB team, MONA, MassBankView Spectrum
Experimental GC-MSGC-MS Spectrum - Cyclododecanone EI-B (Non-derivatized)splash10-0a4l-9100000000-6fb6aedc0ad900632feb2017-09-12HMDB team, MONA, MassBankView Spectrum
Experimental GC-MSGC-MS Spectrum - Cyclododecanone EI-B (Non-derivatized)splash10-052f-9100000000-ee6ff0fc7fa019b3a4b82017-09-12HMDB team, MONA, MassBankView Spectrum
Experimental GC-MSGC-MS Spectrum - Cyclododecanone EI-B (Non-derivatized)splash10-0a4l-9100000000-9ec8a117768df777e2ed2018-05-18HMDB team, MONA, MassBankView Spectrum
Experimental GC-MSGC-MS Spectrum - Cyclododecanone EI-B (Non-derivatized)splash10-0a4l-9100000000-6fb6aedc0ad900632feb2018-05-18HMDB team, MONA, MassBankView Spectrum
Experimental GC-MSGC-MS Spectrum - Cyclododecanone EI-B (Non-derivatized)splash10-052f-9100000000-ee6ff0fc7fa019b3a4b82018-05-18HMDB team, MONA, MassBankView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Cyclododecanone GC-MS (Non-derivatized) - 70eV, Positivesplash10-001i-0900000000-a9f4fcf935bb3cc051812017-09-01Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Cyclododecanone GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Cyclododecanone GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Cyclododecanone 10V, Positive-QTOFsplash10-001i-0900000000-f61ca1da5e34653888ea2016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Cyclododecanone 20V, Positive-QTOFsplash10-001i-2900000000-df8859761f15bb7403332016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Cyclododecanone 40V, Positive-QTOFsplash10-01tc-4900000000-3185f21903c9fe45d1de2016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Cyclododecanone 10V, Negative-QTOFsplash10-001i-0900000000-01ddd01cec0f99522d9f2016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Cyclododecanone 20V, Negative-QTOFsplash10-001i-0900000000-c8a3d5e29806c99ab9dd2016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Cyclododecanone 40V, Negative-QTOFsplash10-0f6x-9800000000-aff386499599ba63e5952016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Cyclododecanone 10V, Positive-QTOFsplash10-0159-0900000000-972426a245d5533481102021-09-25Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Cyclododecanone 20V, Positive-QTOFsplash10-00lr-0900000000-70d02bd55e757acd00542021-09-25Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Cyclododecanone 40V, Positive-QTOFsplash10-02t9-0900000000-2823e5cc8739171c257d2021-09-25Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Cyclododecanone 10V, Negative-QTOFsplash10-001i-0900000000-2d87f53c30e614a486542021-09-25Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Cyclododecanone 20V, Negative-QTOFsplash10-001i-0900000000-2d87f53c30e614a486542021-09-25Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Cyclododecanone 40V, Negative-QTOFsplash10-004i-0900000000-aedef7b3e1e7b2783e542021-09-25Wishart LabView Spectrum

IR Spectra

Spectrum TypeDescriptionDeposition DateSourceView
Predicted IR SpectrumIR Ion Spectrum (Predicted IRIS Spectrum, Adduct: [M+H]+)2023-02-03FELIX labView Spectrum
Predicted IR SpectrumIR Ion Spectrum (Predicted IRIS Spectrum, Adduct: [M+Na]+)2023-02-03FELIX labView Spectrum
Biological Properties
Cellular Locations
  • Membrane
Biospecimen LocationsNot Available
Tissue LocationsNot Available
Pathways
Normal Concentrations
Not Available
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDFDB003405
KNApSAcK IDC00054114
Chemspider ID12690
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkCyclododecanone
METLIN IDNot Available
PubChem Compound13246
PDB IDNot Available
ChEBI IDNot Available
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDrw1232391
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General References
  1. (). Yannai, Shmuel. (2004) Dictionary of food compounds with CD-ROM: Additives, flavors, and ingredients. Boca Raton: Chapman & Hall/CRC.. .