Hmdb loader
Record Information
Version5.0
StatusExpected but not Quantified
Creation Date2012-09-11 17:50:36 UTC
Update Date2023-02-21 17:22:25 UTC
HMDB IDHMDB0032581
Secondary Accession Numbers
  • HMDB32581
Metabolite Identification
Common Name1-(Isothiocyanatomethyl)-4-methoxybenzene
Description1-(Isothiocyanatomethyl)-4-methoxybenzene, also known as 4-methoxybenzyl isothiocyanate or phenethylidene-malononitrile, belongs to the class of organic compounds known as anisoles. These are organic compounds containing a methoxybenzene or a derivative thereof. Based on a literature review very few articles have been published on 1-(Isothiocyanatomethyl)-4-methoxybenzene.
Structure
Data?1677000145
Synonyms
ValueSource
1-(Isothiocyanatomethyl)-4-methoxy-benzeneHMDB
1-(Isothiocyanatomethyl)-4-methoxybenzene, 9ciHMDB
4-Methoxybenzyl isothiocyanateHMDB
Phenethylidene-malononitrileHMDB
4-Methoxybenzyl isothiocyanic acidHMDB
Chemical FormulaC9H9NOS
Average Molecular Weight179.239
Monoisotopic Molecular Weight179.040484605
IUPAC Name1-(isothiocyanatomethyl)-4-methoxybenzene
Traditional Name1-(isothiocyanatomethyl)-4-methoxybenzene
CAS Registry Number3694-57-3
SMILES
COC1=CC=C(CN=C=S)C=C1
InChI Identifier
InChI=1S/C9H9NOS/c1-11-9-4-2-8(3-5-9)6-10-7-12/h2-5H,6H2,1H3
InChI KeyIMFQYAJJXFXVMM-UHFFFAOYSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as anisoles. These are organic compounds containing a methoxybenzene or a derivative thereof.
KingdomOrganic compounds
Super ClassBenzenoids
ClassPhenol ethers
Sub ClassAnisoles
Direct ParentAnisoles
Alternative Parents
Substituents
  • Phenoxy compound
  • Anisole
  • Methoxybenzene
  • Alkyl aryl ether
  • Monocyclic benzene moiety
  • Isothiocyanate
  • Ether
  • Organic 1,3-dipolar compound
  • Propargyl-type 1,3-dipolar organic compound
  • Organic nitrogen compound
  • Organooxygen compound
  • Organonitrogen compound
  • Organosulfur compound
  • Hydrocarbon derivative
  • Organopnictogen compound
  • Organic oxygen compound
  • Aromatic homomonocyclic compound
Molecular FrameworkAromatic homomonocyclic compounds
External DescriptorsNot Available
Ontology
Physiological effectNot Available
Disposition
ProcessNot Available
RoleNot Available
Physical Properties
StateNot Available
Experimental Molecular Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water Solubility127.9 mg/L @ 25 °C (est)The Good Scents Company Information System
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
Water Solubility0.04 g/LALOGPS
logP3.55ALOGPS
logP2.64ChemAxon
logS-3.6ALOGPS
pKa (Strongest Basic)-4.3ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count2ChemAxon
Hydrogen Donor Count0ChemAxon
Polar Surface Area21.59 ŲChemAxon
Rotatable Bond Count3ChemAxon
Refractivity52.4 m³·mol⁻¹ChemAxon
Polarizability19.21 ųChemAxon
Number of Rings1ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterYesChemAxon
Veber's RuleYesChemAxon
MDDR-like RuleNoChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DarkChem[M+H]+140.11931661259
DarkChem[M-H]-139.39631661259
DeepCCS[M+H]+136.8630932474
DeepCCS[M-H]-133.03330932474
DeepCCS[M-2H]-170.62930932474
DeepCCS[M+Na]+146.16830932474
AllCCS[M+H]+137.232859911
AllCCS[M+H-H2O]+132.932859911
AllCCS[M+NH4]+141.132859911
AllCCS[M+Na]+142.332859911
AllCCS[M-H]-138.732859911
AllCCS[M+Na-2H]-139.932859911
AllCCS[M+HCOO]-141.232859911

Predicted Kovats Retention Indices

Underivatized

MetaboliteSMILESKovats RI ValueColumn TypeReference
1-(Isothiocyanatomethyl)-4-methoxybenzeneCOC1=CC=C(CN=C=S)C=C12466.2Standard polar33892256
1-(Isothiocyanatomethyl)-4-methoxybenzeneCOC1=CC=C(CN=C=S)C=C11556.9Standard non polar33892256
1-(Isothiocyanatomethyl)-4-methoxybenzeneCOC1=CC=C(CN=C=S)C=C11614.6Semi standard non polar33892256
Spectra

GC-MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted GC-MSPredicted GC-MS Spectrum - 1-(Isothiocyanatomethyl)-4-methoxybenzene GC-MS (Non-derivatized) - 70eV, Positivesplash10-00dl-7900000000-fae0a5626d66d33f96652017-09-01Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - 1-(Isothiocyanatomethyl)-4-methoxybenzene GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 1-(Isothiocyanatomethyl)-4-methoxybenzene 10V, Positive-QTOFsplash10-001i-0900000000-4fb9b147af79d43a43672015-04-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 1-(Isothiocyanatomethyl)-4-methoxybenzene 20V, Positive-QTOFsplash10-001i-0900000000-8e7d22045013c3ed04cc2015-04-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 1-(Isothiocyanatomethyl)-4-methoxybenzene 40V, Positive-QTOFsplash10-0w30-2900000000-53bc23e1b4a858ebe9782015-04-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 1-(Isothiocyanatomethyl)-4-methoxybenzene 10V, Negative-QTOFsplash10-004i-0900000000-41927bcc2d19909d23e12015-04-25Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 1-(Isothiocyanatomethyl)-4-methoxybenzene 20V, Negative-QTOFsplash10-004i-0900000000-6fd18b426fe0bbf857752015-04-25Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 1-(Isothiocyanatomethyl)-4-methoxybenzene 40V, Negative-QTOFsplash10-03di-3900000000-a723c4afc6a98daac8d52015-04-25Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 1-(Isothiocyanatomethyl)-4-methoxybenzene 10V, Negative-QTOFsplash10-0a4i-9000000000-286b63d3516de7d14a122021-09-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 1-(Isothiocyanatomethyl)-4-methoxybenzene 20V, Negative-QTOFsplash10-0a4i-9000000000-286b63d3516de7d14a122021-09-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 1-(Isothiocyanatomethyl)-4-methoxybenzene 40V, Negative-QTOFsplash10-0a4i-9000000000-286b63d3516de7d14a122021-09-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 1-(Isothiocyanatomethyl)-4-methoxybenzene 10V, Positive-QTOFsplash10-00e9-1900000000-71bb3ed6fc04bee11eff2021-09-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 1-(Isothiocyanatomethyl)-4-methoxybenzene 20V, Positive-QTOFsplash10-00di-5900000000-ef46d7bea10f614a8a832021-09-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 1-(Isothiocyanatomethyl)-4-methoxybenzene 40V, Positive-QTOFsplash10-004l-9100000000-da4be807afbe531478232021-09-24Wishart LabView Spectrum

IR Spectra

Spectrum TypeDescriptionDeposition DateSourceView
Predicted IR SpectrumIR Ion Spectrum (Predicted IRIS Spectrum, Adduct: [M+H]+)2023-02-04FELIX labView Spectrum
Predicted IR SpectrumIR Ion Spectrum (Predicted IRIS Spectrum, Adduct: [M+Na]+)2023-02-04FELIX labView Spectrum
Biological Properties
Cellular Locations
  • Membrane
Biospecimen LocationsNot Available
Tissue LocationsNot Available
Pathways
Normal Concentrations
Not Available
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDFDB010518
KNApSAcK IDNot Available
Chemspider ID109812
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound123197
PDB IDNot Available
ChEBI IDNot Available
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDrw1830361
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General References
  1. (). Yannai, Shmuel. (2004) Dictionary of food compounds with CD-ROM: Additives, flavors, and ingredients. Boca Raton: Chapman & Hall/CRC.. .