Hmdb loader
Record Information
Version5.0
StatusExpected but not Quantified
Creation Date2012-09-11 17:53:21 UTC
Update Date2022-03-07 02:53:34 UTC
HMDB IDHMDB0033031
Secondary Accession Numbers
  • HMDB33031
Metabolite Identification
Common NameNeoacrimarine H
DescriptionNeoacrimarine H belongs to the class of organic compounds known as acridones. These are acridines containing a ketone group attached to the C9 carbon atom of the acridine moiety. Neoacrimarine H has been detected, but not quantified in, citrus. This could make neoacrimarine H a potential biomarker for the consumption of these foods. Based on a literature review very few articles have been published on Neoacrimarine H.
Structure
Data?1563862342
Synonyms
ValueSource
(+)-Neoacrimarine-HHMDB
Chemical FormulaC33H29NO8
Average Molecular Weight567.5853
Monoisotopic Molecular Weight567.189316909
IUPAC Name11-hydroxy-6-({13-hydroxy-12,12-dimethyl-4-oxo-3,11-dioxatricyclo[8.4.0.0²,⁷]tetradeca-1(10),2(7),5,8-tetraen-14-yl}oxy)-2,2,5-trimethyl-5,10-dihydro-2H-1-oxa-5-azatetraphen-10-one
Traditional Name11-hydroxy-6-({13-hydroxy-12,12-dimethyl-4-oxo-3,11-dioxatricyclo[8.4.0.0²,⁷]tetradeca-1(10),2(7),5,8-tetraen-14-yl}oxy)-2,2,5-trimethyl-1-oxa-5-azatetraphen-10-one
CAS Registry Number217199-06-9
SMILES
CN1C2=C(C=CC=C2OC2C(O)C(C)(C)OC3=C2C2=C(C=CC(=O)O2)C=C3)C(=O)C2=C1C1=C(OC(C)(C)C=C1)C=C2O
InChI Identifier
InChI=1S/C33H29NO8/c1-32(2)14-13-17-22(41-32)15-19(35)24-27(17)34(5)26-18(28(24)37)7-6-8-21(26)39-30-25-20(42-33(3,4)31(30)38)11-9-16-10-12-23(36)40-29(16)25/h6-15,30-31,35,38H,1-5H3
InChI KeyKYDGDSAPWLVOME-UHFFFAOYSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as acridones. These are acridines containing a ketone group attached to the C9 carbon atom of the acridine moiety.
KingdomOrganic compounds
Super ClassOrganoheterocyclic compounds
ClassQuinolines and derivatives
Sub ClassBenzoquinolines
Direct ParentAcridones
Alternative Parents
Substituents
  • Acridone
  • Pyranocoumarin
  • Angular pyranocoumarin
  • Pyranochromene
  • Chromenopyridine
  • 2,2-dimethyl-1-benzopyran
  • Coumarin
  • Dihydroquinolone
  • Dihydroquinoline
  • 1-benzopyran
  • Benzopyran
  • Chromane
  • Pyranone
  • Alkyl aryl ether
  • 1-hydroxy-2-unsubstituted benzenoid
  • Pyran
  • Benzenoid
  • Pyridine
  • Heteroaromatic compound
  • Vinylogous amide
  • Vinylogous acid
  • Secondary alcohol
  • Lactone
  • Azacycle
  • Ether
  • Oxacycle
  • Alcohol
  • Organic nitrogen compound
  • Hydrocarbon derivative
  • Organic oxide
  • Organopnictogen compound
  • Organic oxygen compound
  • Organonitrogen compound
  • Organooxygen compound
  • Aromatic heteropolycyclic compound
Molecular FrameworkAromatic heteropolycyclic compounds
External DescriptorsNot Available
Ontology
Physiological effectNot Available
Disposition
ProcessNot Available
Role
Physical Properties
StateNot Available
Experimental Molecular Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
Water Solubility0.006 g/LALOGPS
logP4.6ALOGPS
logP5.54ChemAxon
logS-5ALOGPS
pKa (Strongest Acidic)10.14ChemAxon
pKa (Strongest Basic)-3.7ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count8ChemAxon
Hydrogen Donor Count2ChemAxon
Polar Surface Area114.76 ŲChemAxon
Rotatable Bond Count2ChemAxon
Refractivity156.08 m³·mol⁻¹ChemAxon
Polarizability58.29 ųChemAxon
Number of Rings7ChemAxon
BioavailabilityNoChemAxon
Rule of FiveNoChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DarkChem[M+H]+226.1731661259
DarkChem[M-H]-220.43631661259
DeepCCS[M+H]+219.82530932474
DeepCCS[M-H]-217.89630932474
DeepCCS[M-2H]-251.13530932474
DeepCCS[M+Na]+225.63230932474
AllCCS[M+H]+233.632859911
AllCCS[M+H-H2O]+232.032859911
AllCCS[M+NH4]+235.132859911
AllCCS[M+Na]+235.532859911
AllCCS[M-H]-226.332859911
AllCCS[M+Na-2H]-227.132859911
AllCCS[M+HCOO]-228.332859911

Predicted Kovats Retention Indices

Underivatized

MetaboliteSMILESKovats RI ValueColumn TypeReference
Neoacrimarine HCN1C2=C(C=CC=C2OC2C(O)C(C)(C)OC3=C2C2=C(C=CC(=O)O2)C=C3)C(=O)C2=C1C1=C(OC(C)(C)C=C1)C=C2O5906.2Standard polar33892256
Neoacrimarine HCN1C2=C(C=CC=C2OC2C(O)C(C)(C)OC3=C2C2=C(C=CC(=O)O2)C=C3)C(=O)C2=C1C1=C(OC(C)(C)C=C1)C=C2O4149.0Standard non polar33892256
Neoacrimarine HCN1C2=C(C=CC=C2OC2C(O)C(C)(C)OC3=C2C2=C(C=CC(=O)O2)C=C3)C(=O)C2=C1C1=C(OC(C)(C)C=C1)C=C2O5094.3Semi standard non polar33892256

Derivatized

Derivative Name / StructureSMILESKovats RI ValueColumn TypeReference
Neoacrimarine H,1TMS,isomer #1CN1C2=C(OC3C4=C5OC(=O)C=CC5=CC=C4OC(C)(C)C3O[Si](C)(C)C)C=CC=C2C(=O)C2=C(O)C=C3OC(C)(C)C=CC3=C214746.3Semi standard non polar33892256
Neoacrimarine H,1TMS,isomer #2CN1C2=C(OC3C4=C5OC(=O)C=CC5=CC=C4OC(C)(C)C3O)C=CC=C2C(=O)C2=C(O[Si](C)(C)C)C=C3OC(C)(C)C=CC3=C214773.4Semi standard non polar33892256
Neoacrimarine H,2TMS,isomer #1CN1C2=C(OC3C4=C5OC(=O)C=CC5=CC=C4OC(C)(C)C3O[Si](C)(C)C)C=CC=C2C(=O)C2=C(O[Si](C)(C)C)C=C3OC(C)(C)C=CC3=C214636.9Semi standard non polar33892256
Neoacrimarine H,1TBDMS,isomer #1CN1C2=C(OC3C4=C5OC(=O)C=CC5=CC=C4OC(C)(C)C3O[Si](C)(C)C(C)(C)C)C=CC=C2C(=O)C2=C(O)C=C3OC(C)(C)C=CC3=C214938.4Semi standard non polar33892256
Neoacrimarine H,1TBDMS,isomer #2CN1C2=C(OC3C4=C5OC(=O)C=CC5=CC=C4OC(C)(C)C3O)C=CC=C2C(=O)C2=C(O[Si](C)(C)C(C)(C)C)C=C3OC(C)(C)C=CC3=C214974.2Semi standard non polar33892256
Neoacrimarine H,2TBDMS,isomer #1CN1C2=C(OC3C4=C5OC(=O)C=CC5=CC=C4OC(C)(C)C3O[Si](C)(C)C(C)(C)C)C=CC=C2C(=O)C2=C(O[Si](C)(C)C(C)(C)C)C=C3OC(C)(C)C=CC3=C215027.2Semi standard non polar33892256
Spectra

GC-MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted GC-MSPredicted GC-MS Spectrum - Neoacrimarine H GC-MS (Non-derivatized) - 70eV, Positivesplash10-0udr-0063090000-cea4ce0208dd004c3f502017-09-01Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Neoacrimarine H GC-MS (1 TMS) - 70eV, Positivesplash10-00di-6062029000-fc7ca5add166de65baa82017-10-06Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Neoacrimarine H GC-MS ("Neoacrimarine H,1TMS,#1" TMS) - 70eV, PositiveNot Available2021-10-14Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Neoacrimarine H GC-MS (TMS_1_2) - 70eV, PositiveNot Available2021-10-15Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Neoacrimarine H GC-MS (TMS_2_1) - 70eV, PositiveNot Available2021-10-15Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Neoacrimarine H GC-MS (TBDMS_1_1) - 70eV, PositiveNot Available2021-10-15Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Neoacrimarine H GC-MS (TBDMS_1_2) - 70eV, PositiveNot Available2021-10-15Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Neoacrimarine H GC-MS (TBDMS_2_1) - 70eV, PositiveNot Available2021-10-15Wishart LabView Spectrum

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Neoacrimarine H 10V, Positive-QTOFsplash10-014i-1000190000-fe36dcf43b2002dfc47d2015-04-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Neoacrimarine H 20V, Positive-QTOFsplash10-0hft-1000390000-733d11297f5d20aac4672015-04-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Neoacrimarine H 40V, Positive-QTOFsplash10-01ds-8291200000-1827a68dffade0e1ff762015-04-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Neoacrimarine H 10V, Negative-QTOFsplash10-014i-0000190000-f001be052c57a01e6feb2015-04-25Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Neoacrimarine H 20V, Negative-QTOFsplash10-00r6-1002590000-b448983d169d7efb0cf02015-04-25Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Neoacrimarine H 40V, Negative-QTOFsplash10-0ab9-2189100000-168a67550a45235a05042015-04-25Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Neoacrimarine H 10V, Positive-QTOFsplash10-014i-0010090000-7f97c20856457bc297f82021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Neoacrimarine H 20V, Positive-QTOFsplash10-014i-0011190000-72e9deeb47f77e45fde02021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Neoacrimarine H 40V, Positive-QTOFsplash10-03ml-3534590000-801400b93c08d1bd7cf32021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Neoacrimarine H 10V, Negative-QTOFsplash10-014i-0000090000-34a65b92c40e8cbfd3cf2021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Neoacrimarine H 20V, Negative-QTOFsplash10-014i-0001090000-fb6943bdebad1eb3b52b2021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Neoacrimarine H 40V, Negative-QTOFsplash10-07bf-1565590000-e4ce681eed0cabf292682021-09-22Wishart LabView Spectrum
Biological Properties
Cellular Locations
  • Membrane
Biospecimen LocationsNot Available
Tissue LocationsNot Available
Pathways
Normal Concentrations
Not Available
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDFDB011023
KNApSAcK IDC00024226
Chemspider ID8682617
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound10507216
PDB IDNot Available
ChEBI IDNot Available
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDNot Available
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General References
  1. (). Yannai, Shmuel. (2004) Dictionary of food compounds with CD-ROM: Additives, flavors, and ingredients. Boca Raton: Chapman & Hall/CRC.. .