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Identification Taxonomy Ontology Physical properties Spectra Biological properties Concentrations Links References enzymes (1)transporters (8) Show 9 proteins XML

enzymes (1)transporters (8) Show 9 proteins

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Record Information

Version

5.0

Status

Expected but not Quantified

Creation Date

2005-11-16 15:48:42 UTC

Update Date

2022-03-07 02:49:00 UTC

HMDB ID

HMDB0000340

Secondary Accession Numbers

HMDB00340

Metabolite Identification

Common Name

3a,7a,12a,19-Tetrahydroxy-5b-cholanoic acid

Description

3a,7a,12a,19-Tetrahydroxy-5b-cholanoic acid is a bile acid. Bile acids are steroid acids found predominantly in bile of mammals. The distinction between different bile acids is minute, depends only on presence or absence of hydroxyl groups on positions 3, 7, and 12. Bile acids are physiological detergents that facilitate excretion, absorption, and transport of fats and sterols in the intestine and liver. Bile acids are also steroidal amphipathic molecules derived from the catabolism of cholesterol. They modulate bile flow and lipid secretion, are essential for the absorption of dietary fats and vitamins, and have been implicated in the regulation of all the key enzymes involved in cholesterol homeostasis. Bile acids recirculate through the liver, bile ducts, small intestine and portal vein to form an enterohepatic circuit. They exist as anions at physiological pH and, consequently, require a carrier for transport across the membranes of the enterohepatic tissues. The unique detergent properties of bile acids are essential for the digestion and intestinal absorption of hydrophobic nutrients. Bile acids have potent toxic properties (e.g., membrane disruption) and there are a plethora of mechanisms to limit their accumulation in blood and tissues.

Structure

MOL 3D MOL SDF 3D SDF PDB 3D PDB SMILES InChI

3a,7a,12a,19-Tetrahydroxy-5b-cholanoic acid.mol
  Mrv0541 02231218282D          

 34 37  0  0  0  0            999 V2000
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  8 33  1  1  0  0  0
  9 34  1  6  0  0  0
M  END

HMDB0000340
     RDKit          3D
3a,7a,12a,19-Tetrahydroxy-5b-cholanoic acid
 70 73  0  0  0  0  0  0  0  0999 V2000
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M  END

3a,7a,12a,19-Tetrahydroxy-5b-cholanoic acid.mol
  Mrv0541 02231218282D          

 34 37  0  0  0  0            999 V2000
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 24 27  1  0  0  0  0
 20 28  1  6  0  0  0
  7 29  1  6  0  0  0
  1 30  1  6  0  0  0
  5 31  1  1  0  0  0
 22 32  1  6  0  0  0
  8 33  1  1  0  0  0
  9 34  1  6  0  0  0
M  END
> <DATABASE_ID>
HMDB0000340

> <DATABASE_NAME>
hmdb

> <SMILES>
[H][C@@]12CC[C@H]([C@H](C)CCC(O)=O)[C@@]1(C)[C@@H](O)C[C@@]1([H])[C@@]2([H])[C@H](O)C[C@]2([H])C[C@H](O)CC[C@]12CO

> <INCHI_IDENTIFIER>
InChI=1S/C24H40O6/c1-13(3-6-21(29)30)16-4-5-17-22-18(11-20(28)23(16,17)2)24(12-25)8-7-15(26)9-14(24)10-19(22)27/h13-20,22,25-28H,3-12H2,1-2H3,(H,29,30)/t13-,14+,15-,16-,17+,18+,19-,20+,22+,23-,24-/m1/s1

> <INCHI_KEY>
RFSKRKUKTCLIAV-OWXKUJNZSA-N

> <FORMULA>
C24H40O6

> <MOLECULAR_WEIGHT>
424.5708

> <EXACT_MASS>
424.282489012

> <JCHEM_ACCEPTOR_COUNT>
6

> <JCHEM_AVERAGE_POLARIZABILITY>
47.905028594257615

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
5

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
1

> <JCHEM_IUPAC>
(4R)-4-[(1S,2R,5R,7S,9R,10R,11S,14R,15R,16S)-5,9,16-trihydroxy-2-(hydroxymethyl)-15-methyltetracyclo[8.7.0.0²,⁷.0¹¹,¹⁵]heptadecan-14-yl]pentanoic acid

> <ALOGPS_LOGP>
1.22

> <JCHEM_LOGP>
1.2017233000000016

> <ALOGPS_LOGS>
-3.27

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
4

> <JCHEM_PHYSIOLOGICAL_CHARGE>
-1

> <JCHEM_PKA>
18.296227008865884

> <JCHEM_PKA_STRONGEST_ACIDIC>
4.475014083979473

> <JCHEM_PKA_STRONGEST_BASIC>
-0.09320549352745178

> <JCHEM_POLAR_SURFACE_AREA>
118.22000000000001

> <JCHEM_REFRACTIVITY>
112.564

> <JCHEM_ROTATABLE_BOND_COUNT>
5

> <JCHEM_RULE_OF_FIVE>
1

> <ALOGPS_SOLUBILITY>
2.28e-01 g/l

> <JCHEM_TRADITIONAL_IUPAC>
(4R)-4-[(1S,2R,5R,7S,9R,10R,11S,14R,15R,16S)-5,9,16-trihydroxy-2-(hydroxymethyl)-15-methyltetracyclo[8.7.0.0²,⁷.0¹¹,¹⁵]heptadecan-14-yl]pentanoic acid

> <JCHEM_VEBER_RULE>
0

$$$$

HMDB0000340
     RDKit          3D
3a,7a,12a,19-Tetrahydroxy-5b-cholanoic acid
 70 73  0  0  0  0  0  0  0  0999 V2000
    4.4416   -2.0303    1.4332 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5364   -1.5667    0.2746 C   0  0  2  0  0  0  0  0  0  0  0  0
    4.1940   -1.7057   -1.0210 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.4968   -1.0323   -1.2789 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.5635    0.4208   -1.1630 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.0100    0.9356   -0.1116 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.1464    1.2290   -2.1875 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.6503   -0.5213    0.6814 C   0  0  1  0  0  0  0  0  0  0  0  0
    3.0514    0.7990    1.1899 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.6674    1.4301    1.5118 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.6560    0.5350    0.9231 C   0  0  1  0  0  0  0  0  0  0  0  0
   -0.6300    1.1108    0.4523 C   0  0  1  0  0  0  0  0  0  0  0  0
   -1.4003    0.0477   -0.2422 C   0  0  2  0  0  0  0  0  0  0  0  0
   -0.6102   -0.7167   -1.2786 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.6397   -1.3065   -0.6574 C   0  0  2  0  0  0  0  0  0  0  0  0
    0.4167   -2.2998    0.2498 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.4693   -0.1577   -0.1833 C   0  0  2  0  0  0  0  0  0  0  0  0
    1.7461    0.7411   -1.3233 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7365    0.4791   -0.6875 C   0  0  1  0  0  0  0  0  0  0  0  0
   -2.8256    1.6191   -1.6367 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2877    2.7929   -1.1267 O   0  0  0  0  0  0  0  0  0  0  0  0
   -3.4054   -0.7150   -1.3971 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.8693   -0.4798   -1.6384 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.6297   -0.2131   -0.3568 C   0  0  1  0  0  0  0  0  0  0  0  0
   -6.6227   -1.1462   -0.1306 O   0  0  0  0  0  0  0  0  0  0  0  0
   -4.6160   -0.2862    0.7634 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.5640    0.7846    0.5608 C   0  0  1  0  0  0  0  0  0  0  0  0
   -2.7521    0.8438    1.8076 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4232    1.5061    1.6961 C   0  0  1  0  0  0  0  0  0  0  0  0
   -0.7222    1.1696    2.8697 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.8262   -3.0330    1.2635 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.7440   -2.0976    2.3101 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.1853   -1.2664    1.6895 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.8103   -2.5214    0.2804 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.5498   -1.4566   -1.9024 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.4150   -2.8123   -1.2402 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.8608   -1.2554   -2.3407 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.3322   -1.4627   -0.6657 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.4363    2.1909   -2.3068 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.0775   -0.9593    1.6194 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.6519    0.7151    2.1086 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.5072    1.5169    0.5256 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.5793    1.4053    2.6364 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.6075    2.4707    1.2014 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.4258   -0.2693    1.6669 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4310    2.0294   -0.0884 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5980   -0.7407    0.5612 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3082   -0.1192   -2.1436 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2521   -1.5702   -1.6040 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.2014   -1.7764   -1.5192 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1536   -2.1050    1.0056 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.8551    1.4183   -1.5016 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.8503    0.1547   -2.2858 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.5981    1.4060   -1.2619 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.9011    1.8853   -1.8627 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3956    1.3958   -2.6411 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9997    3.4318   -1.8231 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.2331   -1.6551   -0.8784 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.9277   -0.7430   -2.4206 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.0771    0.3075   -2.3763 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.2654   -1.4217   -2.0768 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.0614    0.7940   -0.3428 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.5108   -0.7162   -0.2018 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.1644   -0.0033    1.7040 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.1901   -1.2867    0.8827 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.1230    1.7427    0.4380 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.3473    1.4667    2.5427 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.6891   -0.1598    2.3251 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5695    2.6106    1.7606 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9064    0.2227    3.1314 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  1  0
  3  4  1  0
  4  5  1  0
  5  6  2  0
  5  7  1  0
  2  8  1  0
  8  9  1  0
  9 10  1  0
 10 11  1  0
 11 12  1  0
 12 13  1  0
 13 14  1  0
 14 15  1  0
 15 16  1  0
 15 17  1  0
 17 18  1  6
 13 19  1  0
 19 20  1  6
 20 21  1  0
 19 22  1  0
 22 23  1  0
 23 24  1  0
 24 25  1  0
 24 26  1  0
 26 27  1  0
 27 28  1  0
 28 29  1  0
 29 30  1  0
 17  8  1  0
 27 19  1  0
 17 11  1  0
 29 12  1  0
  1 31  1  0
  1 32  1  0
  1 33  1  0
  2 34  1  6
  3 35  1  0
  3 36  1  0
  4 37  1  0
  4 38  1  0
  7 39  1  0
  8 40  1  1
  9 41  1  0
  9 42  1  0
 10 43  1  0
 10 44  1  0
 11 45  1  1
 12 46  1  6
 13 47  1  1
 14 48  1  0
 14 49  1  0
 15 50  1  6
 16 51  1  0
 18 52  1  0
 18 53  1  0
 18 54  1  0
 20 55  1  0
 20 56  1  0
 21 57  1  0
 22 58  1  0
 22 59  1  0
 23 60  1  0
 23 61  1  0
 24 62  1  6
 25 63  1  0
 26 64  1  0
 26 65  1  0
 27 66  1  6
 28 67  1  0
 28 68  1  0
 29 69  1  6
 30 70  1  0
M  END

HEADER    PROTEIN                                 23-FEB-12   NONE
TITLE     NULL                                                        
COMPND    MOLECULE: 3a,7a,12a,19-Tetrahydroxy-5b-cholanoic acid.mol   
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   23-FEB-12         0                                  
HETATM    1  C   UNK     0      -4.581  -4.357   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0      -4.581  -2.817   0.000  0.00  0.00           C+0
HETATM    3  C   UNK     0      -3.247  -2.047   0.000  0.00  0.00           C+0
HETATM    4  C   UNK     0      -3.247  -5.127   0.000  0.00  0.00           C+0
HETATM    5  C   UNK     0      -1.913  -4.357   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0      -0.580  -5.127   0.000  0.00  0.00           C+0
HETATM    7  C   UNK     0       0.754  -4.357   0.000  0.00  0.00           C+0
HETATM    8  C   UNK     0       0.754  -2.817   0.000  0.00  0.00           C+0
HETATM    9  C   UNK     0       2.088  -2.047   0.000  0.00  0.00           C+0
HETATM   10  C   UNK     0       3.552  -2.522   0.000  0.00  0.00           C+0
HETATM   11  C   UNK     0       4.458  -1.277   0.000  0.00  0.00           C+0
HETATM   12  C   UNK     0       3.552  -0.031   0.000  0.00  0.00           C+0
HETATM   13  C   UNK     0       4.028   1.434   0.000  0.00  0.00           C+0
HETATM   14  C   UNK     0       2.939   2.523   0.000  0.00  0.00           C+0
HETATM   15  C   UNK     0       3.338   4.010   0.000  0.00  0.00           C+0
HETATM   16  C   UNK     0       4.825   4.409   0.000  0.00  0.00           C+0
HETATM   17  C   UNK     0       5.535   1.754   0.000  0.00  0.00           C+0
HETATM   18  C   UNK     0       2.088  -0.507   0.000  0.00  0.00           C+0
HETATM   19  C   UNK     0       2.088   1.033   0.000  0.00  0.00           C+0
HETATM   20  C   UNK     0       0.754   0.263   0.000  0.00  0.00           C+0
HETATM   21  C   UNK     0      -0.580  -0.507   0.000  0.00  0.00           C+0
HETATM   22  C   UNK     0      -0.580  -2.047   0.000  0.00  0.00           C+0
HETATM   23  C   UNK     0      -1.913  -2.817   0.000  0.00  0.00           C+0
HETATM   24  C   UNK     0      -1.913  -1.277   0.000  0.00  0.00           C+0
HETATM   25  O   UNK     0       5.224   5.897   0.000  0.00  0.00           O+0
HETATM   26  O   UNK     0       5.914   3.320   0.000  0.00  0.00           O+0
HETATM   27  O   UNK     0      -3.247  -0.507   0.000  0.00  0.00           O+0
HETATM   28  O   UNK     0       0.754   1.803   0.000  0.00  0.00           O+0
HETATM   29  O   UNK     0       2.088  -5.127   0.000  0.00  0.00           O+0
HETATM   30  O   UNK     0      -5.914  -5.127   0.000  0.00  0.00           O+0
HETATM   31  H   UNK     0      -1.913  -5.897   0.000  0.00  0.00           H+0
HETATM   32  H   UNK     0      -0.580  -3.587   0.000  0.00  0.00           H+0
HETATM   33  H   UNK     0       0.754  -1.277   0.000  0.00  0.00           H+0
HETATM   34  H   UNK     0       2.088  -3.587   0.000  0.00  0.00           H+0
CONECT    1    2    4   30                                                  
CONECT    2    1    3                                                       
CONECT    3    2   23                                                       
CONECT    4    1    5                                                       
CONECT    5    4    6   23   31                                             
CONECT    6    5    7                                                       
CONECT    7    6    8   29                                                  
CONECT    8    7    9   22   33                                             
CONECT    9    8   10   18   34                                             
CONECT   10    9   11                                                       
CONECT   11   10   12                                                       
CONECT   12   11   13   18                                                  
CONECT   13   12   14   17                                                  
CONECT   14   13   15                                                       
CONECT   15   14   16                                                       
CONECT   16   15   25   26                                                  
CONECT   17   13                                                            
CONECT   18   12    9   19   20                                             
CONECT   19   18                                                            
CONECT   20   18   21   28                                                  
CONECT   21   20   22                                                       
CONECT   22   21    8   23   32                                             
CONECT   23   22    3    5   24                                             
CONECT   24   23   27                                                       
CONECT   25   16                                                            
CONECT   26   16                                                            
CONECT   27   24                                                            
CONECT   28   20                                                            
CONECT   29    7                                                            
CONECT   30    1                                                            
CONECT   31    5                                                            
CONECT   32   22                                                            
CONECT   33    8                                                            
CONECT   34    9                                                            
MASTER        0    0    0    0    0    0    0    0   34    0   74    0
END

COMPND    HMDB0000340
HETATM    1  C1  UNL     1       4.442  -2.030   1.433  1.00  0.00           C  
HETATM    2  C2  UNL     1       3.536  -1.567   0.275  1.00  0.00           C  
HETATM    3  C3  UNL     1       4.194  -1.706  -1.021  1.00  0.00           C  
HETATM    4  C4  UNL     1       5.497  -1.032  -1.279  1.00  0.00           C  
HETATM    5  C5  UNL     1       5.563   0.421  -1.163  1.00  0.00           C  
HETATM    6  O1  UNL     1       6.010   0.936  -0.112  1.00  0.00           O  
HETATM    7  O2  UNL     1       5.146   1.229  -2.187  1.00  0.00           O  
HETATM    8  C6  UNL     1       2.650  -0.521   0.681  1.00  0.00           C  
HETATM    9  C7  UNL     1       3.051   0.799   1.190  1.00  0.00           C  
HETATM   10  C8  UNL     1       1.667   1.430   1.512  1.00  0.00           C  
HETATM   11  C9  UNL     1       0.656   0.535   0.923  1.00  0.00           C  
HETATM   12  C10 UNL     1      -0.630   1.111   0.452  1.00  0.00           C  
HETATM   13  C11 UNL     1      -1.400   0.048  -0.242  1.00  0.00           C  
HETATM   14  C12 UNL     1      -0.610  -0.717  -1.279  1.00  0.00           C  
HETATM   15  C13 UNL     1       0.640  -1.307  -0.657  1.00  0.00           C  
HETATM   16  O3  UNL     1       0.417  -2.300   0.250  1.00  0.00           O  
HETATM   17  C14 UNL     1       1.469  -0.158  -0.183  1.00  0.00           C  
HETATM   18  C15 UNL     1       1.746   0.741  -1.323  1.00  0.00           C  
HETATM   19  C16 UNL     1      -2.737   0.479  -0.688  1.00  0.00           C  
HETATM   20  C17 UNL     1      -2.826   1.619  -1.637  1.00  0.00           C  
HETATM   21  O4  UNL     1      -2.288   2.793  -1.127  1.00  0.00           O  
HETATM   22  C18 UNL     1      -3.405  -0.715  -1.397  1.00  0.00           C  
HETATM   23  C19 UNL     1      -4.869  -0.480  -1.638  1.00  0.00           C  
HETATM   24  C20 UNL     1      -5.630  -0.213  -0.357  1.00  0.00           C  
HETATM   25  O5  UNL     1      -6.623  -1.146  -0.131  1.00  0.00           O  
HETATM   26  C21 UNL     1      -4.616  -0.286   0.763  1.00  0.00           C  
HETATM   27  C22 UNL     1      -3.564   0.785   0.561  1.00  0.00           C  
HETATM   28  C23 UNL     1      -2.752   0.844   1.808  1.00  0.00           C  
HETATM   29  C24 UNL     1      -1.423   1.506   1.696  1.00  0.00           C  
HETATM   30  O6  UNL     1      -0.722   1.170   2.870  1.00  0.00           O  
HETATM   31  H1  UNL     1       4.826  -3.033   1.264  1.00  0.00           H  
HETATM   32  H2  UNL     1       3.744  -2.098   2.310  1.00  0.00           H  
HETATM   33  H3  UNL     1       5.185  -1.266   1.690  1.00  0.00           H  
HETATM   34  H4  UNL     1       2.810  -2.521   0.280  1.00  0.00           H  
HETATM   35  H5  UNL     1       3.550  -1.457  -1.902  1.00  0.00           H  
HETATM   36  H6  UNL     1       4.415  -2.812  -1.240  1.00  0.00           H  
HETATM   37  H7  UNL     1       5.861  -1.255  -2.341  1.00  0.00           H  
HETATM   38  H8  UNL     1       6.332  -1.463  -0.666  1.00  0.00           H  
HETATM   39  H9  UNL     1       5.436   2.191  -2.307  1.00  0.00           H  
HETATM   40  H10 UNL     1       2.078  -0.959   1.619  1.00  0.00           H  
HETATM   41  H11 UNL     1       3.652   0.715   2.109  1.00  0.00           H  
HETATM   42  H12 UNL     1       3.507   1.517   0.526  1.00  0.00           H  
HETATM   43  H13 UNL     1       1.579   1.405   2.636  1.00  0.00           H  
HETATM   44  H14 UNL     1       1.608   2.471   1.201  1.00  0.00           H  
HETATM   45  H15 UNL     1       0.426  -0.269   1.667  1.00  0.00           H  
HETATM   46  H16 UNL     1      -0.431   2.029  -0.088  1.00  0.00           H  
HETATM   47  H17 UNL     1      -1.598  -0.741   0.561  1.00  0.00           H  
HETATM   48  H18 UNL     1      -0.308  -0.119  -2.144  1.00  0.00           H  
HETATM   49  H19 UNL     1      -1.252  -1.570  -1.604  1.00  0.00           H  
HETATM   50  H20 UNL     1       1.201  -1.776  -1.519  1.00  0.00           H  
HETATM   51  H21 UNL     1      -0.154  -2.105   1.006  1.00  0.00           H  
HETATM   52  H22 UNL     1       0.855   1.418  -1.502  1.00  0.00           H  
HETATM   53  H23 UNL     1       1.850   0.155  -2.286  1.00  0.00           H  
HETATM   54  H24 UNL     1       2.598   1.406  -1.262  1.00  0.00           H  
HETATM   55  H25 UNL     1      -3.901   1.885  -1.863  1.00  0.00           H  
HETATM   56  H26 UNL     1      -2.396   1.396  -2.641  1.00  0.00           H  
HETATM   57  H27 UNL     1      -2.000   3.432  -1.823  1.00  0.00           H  
HETATM   58  H28 UNL     1      -3.233  -1.655  -0.878  1.00  0.00           H  
HETATM   59  H29 UNL     1      -2.928  -0.743  -2.421  1.00  0.00           H  
HETATM   60  H30 UNL     1      -5.077   0.308  -2.376  1.00  0.00           H  
HETATM   61  H31 UNL     1      -5.265  -1.422  -2.077  1.00  0.00           H  
HETATM   62  H32 UNL     1      -6.061   0.794  -0.343  1.00  0.00           H  
HETATM   63  H33 UNL     1      -7.511  -0.716  -0.202  1.00  0.00           H  
HETATM   64  H34 UNL     1      -5.164  -0.003   1.704  1.00  0.00           H  
HETATM   65  H35 UNL     1      -4.190  -1.287   0.883  1.00  0.00           H  
HETATM   66  H36 UNL     1      -4.123   1.743   0.438  1.00  0.00           H  
HETATM   67  H37 UNL     1      -3.347   1.467   2.543  1.00  0.00           H  
HETATM   68  H38 UNL     1      -2.689  -0.160   2.325  1.00  0.00           H  
HETATM   69  H39 UNL     1      -1.570   2.611   1.761  1.00  0.00           H  
HETATM   70  H40 UNL     1      -0.906   0.223   3.131  1.00  0.00           H  
CONECT    1    2   31   32   33
CONECT    2    3    8   34
CONECT    3    4   35   36
CONECT    4    5   37   38
CONECT    5    6    6    7
CONECT    7   39
CONECT    8    9   17   40
CONECT    9   10   41   42
CONECT   10   11   43   44
CONECT   11   12   17   45
CONECT   12   13   29   46
CONECT   13   14   19   47
CONECT   14   15   48   49
CONECT   15   16   17   50
CONECT   16   51
CONECT   17   18
CONECT   18   52   53   54
CONECT   19   20   22   27
CONECT   20   21   55   56
CONECT   21   57
CONECT   22   23   58   59
CONECT   23   24   60   61
CONECT   24   25   26   62
CONECT   25   63
CONECT   26   27   64   65
CONECT   27   28   66
CONECT   28   29   67   68
CONECT   29   30   69
CONECT   30   70
END

HMDB0000340
     RDKit          3D
3a,7a,12a,19-Tetrahydroxy-5b-cholanoic acid
 70 73  0  0  0  0  0  0  0  0999 V2000
    4.4416   -2.0303    1.4332 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5364   -1.5667    0.2746 C   0  0  2  0  0  0  0  0  0  0  0  0
    4.1940   -1.7057   -1.0210 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.4968   -1.0323   -1.2789 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.5635    0.4208   -1.1630 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.0100    0.9356   -0.1116 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.1464    1.2290   -2.1875 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.6503   -0.5213    0.6814 C   0  0  1  0  0  0  0  0  0  0  0  0
    3.0514    0.7990    1.1899 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.6674    1.4301    1.5118 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.6560    0.5350    0.9231 C   0  0  1  0  0  0  0  0  0  0  0  0
   -0.6300    1.1108    0.4523 C   0  0  1  0  0  0  0  0  0  0  0  0
   -1.4003    0.0477   -0.2422 C   0  0  2  0  0  0  0  0  0  0  0  0
   -0.6102   -0.7167   -1.2786 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.6397   -1.3065   -0.6574 C   0  0  2  0  0  0  0  0  0  0  0  0
    0.4167   -2.2998    0.2498 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.4693   -0.1577   -0.1833 C   0  0  2  0  0  0  0  0  0  0  0  0
    1.7461    0.7411   -1.3233 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7365    0.4791   -0.6875 C   0  0  1  0  0  0  0  0  0  0  0  0
   -2.8256    1.6191   -1.6367 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2877    2.7929   -1.1267 O   0  0  0  0  0  0  0  0  0  0  0  0
   -3.4054   -0.7150   -1.3971 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.8693   -0.4798   -1.6384 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.6297   -0.2131   -0.3568 C   0  0  1  0  0  0  0  0  0  0  0  0
   -6.6227   -1.1462   -0.1306 O   0  0  0  0  0  0  0  0  0  0  0  0
   -4.6160   -0.2862    0.7634 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.5640    0.7846    0.5608 C   0  0  1  0  0  0  0  0  0  0  0  0
   -2.7521    0.8438    1.8076 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4232    1.5061    1.6961 C   0  0  1  0  0  0  0  0  0  0  0  0
   -0.7222    1.1696    2.8697 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.8262   -3.0330    1.2635 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.7440   -2.0976    2.3101 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.1853   -1.2664    1.6895 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.8103   -2.5214    0.2804 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.5498   -1.4566   -1.9024 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.4150   -2.8123   -1.2402 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.8608   -1.2554   -2.3407 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.3322   -1.4627   -0.6657 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.4363    2.1909   -2.3068 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.0775   -0.9593    1.6194 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.6519    0.7151    2.1086 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.5072    1.5169    0.5256 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.5793    1.4053    2.6364 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.6075    2.4707    1.2014 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.4258   -0.2693    1.6669 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4310    2.0294   -0.0884 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5980   -0.7407    0.5612 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3082   -0.1192   -2.1436 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2521   -1.5702   -1.6040 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.2014   -1.7764   -1.5192 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1536   -2.1050    1.0056 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.8551    1.4183   -1.5016 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.8503    0.1547   -2.2858 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.5981    1.4060   -1.2619 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.9011    1.8853   -1.8627 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3956    1.3958   -2.6411 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9997    3.4318   -1.8231 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.2331   -1.6551   -0.8784 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.9277   -0.7430   -2.4206 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.0771    0.3075   -2.3763 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.2654   -1.4217   -2.0768 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.0614    0.7940   -0.3428 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.5108   -0.7162   -0.2018 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.1644   -0.0033    1.7040 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.1901   -1.2867    0.8827 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.1230    1.7427    0.4380 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.3473    1.4667    2.5427 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.6891   -0.1598    2.3251 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5695    2.6106    1.7606 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9064    0.2227    3.1314 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  1  0
  3  4  1  0
  4  5  1  0
  5  6  2  0
  5  7  1  0
  2  8  1  0
  8  9  1  0
  9 10  1  0
 10 11  1  0
 11 12  1  0
 12 13  1  0
 13 14  1  0
 14 15  1  0
 15 16  1  0
 15 17  1  0
 17 18  1  6
 13 19  1  0
 19 20  1  6
 20 21  1  0
 19 22  1  0
 22 23  1  0
 23 24  1  0
 24 25  1  0
 24 26  1  0
 26 27  1  0
 27 28  1  0
 28 29  1  0
 29 30  1  0
 17  8  1  0
 27 19  1  0
 17 11  1  0
 29 12  1  0
  1 31  1  0
  1 32  1  0
  1 33  1  0
  2 34  1  6
  3 35  1  0
  3 36  1  0
  4 37  1  0
  4 38  1  0
  7 39  1  0
  8 40  1  1
  9 41  1  0
  9 42  1  0
 10 43  1  0
 10 44  1  0
 11 45  1  1
 12 46  1  6
 13 47  1  1
 14 48  1  0
 14 49  1  0
 15 50  1  6
 16 51  1  0
 18 52  1  0
 18 53  1  0
 18 54  1  0
 20 55  1  0
 20 56  1  0
 21 57  1  0
 22 58  1  0
 22 59  1  0
 23 60  1  0
 23 61  1  0
 24 62  1  6
 25 63  1  0
 26 64  1  0
 26 65  1  0
 27 66  1  6
 28 67  1  0
 28 68  1  0
 29 69  1  6
 30 70  1  0
M  END

View in JSmol View Stereo Labels

Synonyms

Value	Source
3a,7a,12a,19-Tetrahydroxy-5b-cholanoate	Generator
3,7,12,19-THCA	MeSH
3,7,12,19-Tetrahydroxycholanoic acid	MeSH
3a,7a,12a,19-Tetrahydroxy-5b-cholan-24-Oate	HMDB
3a,7a,12a,19-Tetrahydroxy-5b-cholan-24-Oic acid	HMDB
(4R)-4-[(1S,2R,5R,7S,9R,10R,11S,14R,15R,16S)-5,9,16-Trihydroxy-2-(hydroxymethyl)-15-methyltetracyclo[8.7.0.0²,⁷.0¹¹,¹⁵]heptadecan-14-yl]pentanoate	Generator, HMDB
3alpha,7alpha,12alpha,19-Tetrahydroxy-5beta-cholan-24-Oic acid	MeSH, HMDB

Chemical Formula

C₂₄H₄₀O₆

Average Molecular Weight

424.5708

Monoisotopic Molecular Weight

424.282489012

IUPAC Name

(4R)-4-[(1S,2R,5R,7S,9R,10R,11S,14R,15R,16S)-5,9,16-trihydroxy-2-(hydroxymethyl)-15-methyltetracyclo[8.7.0.0²,⁷.0¹¹,¹⁵]heptadecan-14-yl]pentanoic acid

Traditional Name

(4R)-4-[(1S,2R,5R,7S,9R,10R,11S,14R,15R,16S)-5,9,16-trihydroxy-2-(hydroxymethyl)-15-methyltetracyclo[8.7.0.0²,⁷.0¹¹,¹⁵]heptadecan-14-yl]pentanoic acid

CAS Registry Number

171524-64-4

SMILES

[H][C@@]12CC[C@H]([C@H](C)CCC(O)=O)[C@@]1(C)[C@@H](O)C[C@@]1([H])[C@@]2([H])[C@H](O)C[C@]2([H])C[C@H](O)CC[C@]12CO

InChI Identifier

InChI=1S/C24H40O6/c1-13(3-6-21(29)30)16-4-5-17-22-18(11-20(28)23(16,17)2)24(12-25)8-7-15(26)9-14(24)10-19(22)27/h13-20,22,25-28H,3-12H2,1-2H3,(H,29,30)/t13-,14+,15-,16-,17+,18+,19-,20+,22+,23-,24-/m1/s1

InChI Key

RFSKRKUKTCLIAV-OWXKUJNZSA-N

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as tetrahydroxy bile acids, alcohols and derivatives. These are prenol lipids structurally characterized by a bile acid or alcohol which bears four hydroxyl groups.

Kingdom

Organic compounds

Super Class

Lipids and lipid-like molecules

Class

Steroids and steroid derivatives

Sub Class

Bile acids, alcohols and derivatives

Direct Parent

Tetrahydroxy bile acids, alcohols and derivatives

Alternative Parents

Substituents

Tetrahydroxy bile acid, alcohol, or derivatives
19-hydroxysteroid
3-hydroxysteroid
12-hydroxysteroid
7-hydroxysteroid
3-alpha-hydroxysteroid
Hydroxysteroid
Cyclic alcohol
Secondary alcohol
Carboxylic acid derivative
Carboxylic acid
Polyol
Monocarboxylic acid or derivatives
Hydrocarbon derivative
Organic oxide
Alcohol
Organic oxygen compound
Primary alcohol
Carbonyl group
Organooxygen compound
Aliphatic homopolycyclic compound

Molecular Framework

Aliphatic homopolycyclic compounds

External Descriptors

C24 bile acids, alcohols, and derivatives (LMST04010126 )

Ontology

Cellular substructure

Non-excretory biofluid

Biofluid or Excreta

Blood (PMID: 31643938)
Bile (PMID: 31643938)

Excreta

Biofluid or Excreta

Feces (PMID: 31643938)
Urine (PMID: 1112456)

Tissue

Nervous tissue

Hepatic tissue (HMDB: HMDB0000340)

Route of exposure

Enteral

Ingestion (HMDB: HMDB0000340)

Source

Endogenous

Endogenous (HMDB: HMDB0000340)

Animal

Animal (HMDB: HMDB0000340)

Exogenous

Food

Food (HMDB: HMDB0000340)

Animal origin

Poultry

Pheasant (FooDB: FOOD00430)
Squab (FooDB: FOOD00481)
Turkey (FooDB: FOOD00494)
Quail (FooDB: FOOD00541)
Anatidae (FooDB: FOOD00576)
Rock ptarmigan (FooDB: FOOD00597)
Columbidae (Dove, Pigeon) (FooDB: FOOD00610)
Chicken (FooDB: FOOD00329)
Mallard duck (FooDB: FOOD00353)
Emu (FooDB: FOOD00360)
Greylag goose (FooDB: FOOD00368)
Guinea hen (FooDB: FOOD00373)
Ostrich (FooDB: FOOD00422)
Velvet duck (FooDB: FOOD00427)

Lagomorph

Ovis

Sheep (Mutton, Lamb) (FooDB: FOOD00473)

Bovine

Venison

Deer (FooDB: FOOD00524)
Mule deer (FooDB: FOOD00348)
Elk (FooDB: FOOD00359)

Caprae

Domestic goat (FooDB: FOOD00529)

Swine

Domestic pig (FooDB: FOOD00536)
Wild boar (FooDB: FOOD00307)

Equine

Horse (FooDB: FOOD00378)

Exogenous (HMDB: HMDB0000340)

Process

Naturally occurring process

Biological process

Chemical reaction

Lipid Peroxidation (HMDB: HMDB0000340)

Biochemical pathway

Metabolic pathway

Fatty Acid Metabolism (HMDB: HMDB0000340)

Lipid metabolism pathway (HMDB: HMDB0000340)

Cellular process

Cell signaling (HMDB: HMDB0000340)

Biochemical process

Lipid transport (HMDB: HMDB0000340)

Role

Physical Properties

State

Solid

Experimental Molecular Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Experimental Chromatographic Properties

Not Available

Predicted Molecular Properties

Property	Value	Source
Water Solubility	0.23 g/L	ALOGPS
logP	1.22	ALOGPS
logP	1.2	ChemAxon
logS	-3.3	ALOGPS
pKa (Strongest Acidic)	4.48	ChemAxon
pKa (Strongest Basic)	-0.093	ChemAxon
Physiological Charge	-1	ChemAxon
Hydrogen Acceptor Count	6	ChemAxon
Hydrogen Donor Count	5	ChemAxon
Polar Surface Area	118.22 Å²	ChemAxon
Rotatable Bond Count	5	ChemAxon
Refractivity	112.56 m³·mol⁻¹	ChemAxon
Polarizability	47.91 Å³	ChemAxon
Number of Rings	4	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	Yes	ChemAxon
Ghose Filter	Yes	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

Predicted Chromatographic Properties

Predicted Collision Cross Sections

Predictor	Adduct Type	CCS Value (Å²)	Reference
DarkChem	[M+H]+	198.908	31661259
DarkChem	[M-H]-	192.655	31661259
AllCCS	[M+H]+	205.07	32859911
AllCCS	[M-H]-	203.365	32859911
DeepCCS	[M-2H]-	238.228	30932474
DeepCCS	[M+Na]+	212.002	30932474
AllCCS	[M+H]+	205.1	32859911
AllCCS	[M+H-H2O]+	203.1	32859911
AllCCS	[M+NH4]+	206.9	32859911
AllCCS	[M+Na]+	207.4	32859911
AllCCS	[M-H]-	203.4	32859911
AllCCS	[M+Na-2H]-	204.8	32859911
AllCCS	[M+HCOO]-	206.5	32859911

Predicted Kovats Retention Indices

Underivatized

Metabolite	SMILES	Kovats RI Value	Column Type	Reference
3a,7a,12a,19-Tetrahydroxy-5b-cholanoic acid	[H][C@@]12CC[C@H]([C@H](C)CCC(O)=O)[C@@]1(C)[C@@H](O)C[C@@]1([H])[C@@]2([H])[C@H](O)C[C@]2([H])C[C@H](O)CC[C@]12CO	4330.9	Standard polar	33892256
3a,7a,12a,19-Tetrahydroxy-5b-cholanoic acid	[H][C@@]12CC[C@H]([C@H](C)CCC(O)=O)[C@@]1(C)[C@@H](O)C[C@@]1([H])[C@@]2([H])[C@H](O)C[C@]2([H])C[C@H](O)CC[C@]12CO	3636.7	Standard non polar	33892256
3a,7a,12a,19-Tetrahydroxy-5b-cholanoic acid	[H][C@@]12CC[C@H]([C@H](C)CCC(O)=O)[C@@]1(C)[C@@H](O)C[C@@]1([H])[C@@]2([H])[C@H](O)C[C@]2([H])C[C@H](O)CC[C@]12CO	3964.6	Semi standard non polar	33892256

Derivatized

Derivative Name / Structure	SMILES	Kovats RI Value	Column Type	Reference
3a,7a,12a,19-Tetrahydroxy-5b-cholanoic acid,1TMS,isomer #1	C[C@H](CCC(=O)O[Si](C)(C)C)[C@H]1CC[C@H]2[C@H]3[C@H](C[C@H](O)[C@@]21C)[C@@]1(CO)CC[C@@H](O)C[C@H]1C[C@H]3O	3568.7	Semi standard non polar	33892256
3a,7a,12a,19-Tetrahydroxy-5b-cholanoic acid,1TMS,isomer #2	C[C@H](CCC(=O)O)[C@H]1CC[C@H]2[C@H]3[C@H](C[C@H](O[Si](C)(C)C)[C@@]21C)[C@@]1(CO)CC[C@@H](O)C[C@H]1C[C@H]3O	3563.2	Semi standard non polar	33892256
3a,7a,12a,19-Tetrahydroxy-5b-cholanoic acid,1TMS,isomer #3	C[C@H](CCC(=O)O)[C@H]1CC[C@H]2[C@H]3[C@H](C[C@H](O)[C@@]21C)[C@@]1(CO)CC[C@@H](O)C[C@H]1C[C@H]3O[Si](C)(C)C	3526.7	Semi standard non polar	33892256
3a,7a,12a,19-Tetrahydroxy-5b-cholanoic acid,1TMS,isomer #4	C[C@H](CCC(=O)O)[C@H]1CC[C@H]2[C@H]3[C@H](C[C@H](O)[C@@]21C)[C@@]1(CO)CC[C@@H](O[Si](C)(C)C)C[C@H]1C[C@H]3O	3611.6	Semi standard non polar	33892256
3a,7a,12a,19-Tetrahydroxy-5b-cholanoic acid,1TMS,isomer #5	C[C@H](CCC(=O)O)[C@H]1CC[C@H]2[C@H]3[C@H](C[C@H](O)[C@@]21C)[C@@]1(CO[Si](C)(C)C)CC[C@@H](O)C[C@H]1C[C@H]3O	3538.8	Semi standard non polar	33892256
3a,7a,12a,19-Tetrahydroxy-5b-cholanoic acid,2TMS,isomer #1	C[C@H](CCC(=O)O[Si](C)(C)C)[C@H]1CC[C@H]2[C@H]3[C@H](C[C@H](O[Si](C)(C)C)[C@@]21C)[C@@]1(CO)CC[C@@H](O)C[C@H]1C[C@H]3O	3502.9	Semi standard non polar	33892256
3a,7a,12a,19-Tetrahydroxy-5b-cholanoic acid,2TMS,isomer #10	C[C@H](CCC(=O)O)[C@H]1CC[C@H]2[C@H]3[C@H](C[C@H](O)[C@@]21C)[C@@]1(CO[Si](C)(C)C)CC[C@@H](O[Si](C)(C)C)C[C@H]1C[C@H]3O	3500.0	Semi standard non polar	33892256
3a,7a,12a,19-Tetrahydroxy-5b-cholanoic acid,2TMS,isomer #2	C[C@H](CCC(=O)O[Si](C)(C)C)[C@H]1CC[C@H]2[C@H]3[C@H](C[C@H](O)[C@@]21C)[C@@]1(CO[Si](C)(C)C)CC[C@@H](O)C[C@H]1C[C@H]3O	3486.5	Semi standard non polar	33892256
3a,7a,12a,19-Tetrahydroxy-5b-cholanoic acid,2TMS,isomer #3	C[C@H](CCC(=O)O[Si](C)(C)C)[C@H]1CC[C@H]2[C@H]3[C@H](C[C@H](O)[C@@]21C)[C@@]1(CO)CC[C@@H](O[Si](C)(C)C)C[C@H]1C[C@H]3O	3542.5	Semi standard non polar	33892256
3a,7a,12a,19-Tetrahydroxy-5b-cholanoic acid,2TMS,isomer #4	C[C@H](CCC(=O)O[Si](C)(C)C)[C@H]1CC[C@H]2[C@H]3[C@H](C[C@H](O)[C@@]21C)[C@@]1(CO)CC[C@@H](O)C[C@H]1C[C@H]3O[Si](C)(C)C	3465.3	Semi standard non polar	33892256
3a,7a,12a,19-Tetrahydroxy-5b-cholanoic acid,2TMS,isomer #5	C[C@H](CCC(=O)O)[C@H]1CC[C@H]2[C@H]3[C@H](C[C@H](O[Si](C)(C)C)[C@@]21C)[C@@]1(CO[Si](C)(C)C)CC[C@@H](O)C[C@H]1C[C@H]3O	3483.0	Semi standard non polar	33892256
3a,7a,12a,19-Tetrahydroxy-5b-cholanoic acid,2TMS,isomer #6	C[C@H](CCC(=O)O)[C@H]1CC[C@H]2[C@H]3[C@H](C[C@H](O[Si](C)(C)C)[C@@]21C)[C@@]1(CO)CC[C@@H](O[Si](C)(C)C)C[C@H]1C[C@H]3O	3516.0	Semi standard non polar	33892256
3a,7a,12a,19-Tetrahydroxy-5b-cholanoic acid,2TMS,isomer #7	C[C@H](CCC(=O)O)[C@H]1CC[C@H]2[C@H]3[C@H](C[C@H](O[Si](C)(C)C)[C@@]21C)[C@@]1(CO)CC[C@@H](O)C[C@H]1C[C@H]3O[Si](C)(C)C	3483.0	Semi standard non polar	33892256
3a,7a,12a,19-Tetrahydroxy-5b-cholanoic acid,2TMS,isomer #8	C[C@H](CCC(=O)O)[C@H]1CC[C@H]2[C@H]3[C@H](C[C@H](O)[C@@]21C)[C@@]1(CO[Si](C)(C)C)CC[C@@H](O)C[C@H]1C[C@H]3O[Si](C)(C)C	3448.2	Semi standard non polar	33892256
3a,7a,12a,19-Tetrahydroxy-5b-cholanoic acid,2TMS,isomer #9	C[C@H](CCC(=O)O)[C@H]1CC[C@H]2[C@H]3[C@H](C[C@H](O)[C@@]21C)[C@@]1(CO)CC[C@@H](O[Si](C)(C)C)C[C@H]1C[C@H]3O[Si](C)(C)C	3474.5	Semi standard non polar	33892256
3a,7a,12a,19-Tetrahydroxy-5b-cholanoic acid,3TMS,isomer #1	C[C@H](CCC(=O)O[Si](C)(C)C)[C@H]1CC[C@H]2[C@H]3[C@H](C[C@H](O[Si](C)(C)C)[C@@]21C)[C@@]1(CO[Si](C)(C)C)CC[C@@H](O)C[C@H]1C[C@H]3O	3456.8	Semi standard non polar	33892256
3a,7a,12a,19-Tetrahydroxy-5b-cholanoic acid,3TMS,isomer #10	C[C@H](CCC(=O)O)[C@H]1CC[C@H]2[C@H]3[C@H](C[C@H](O)[C@@]21C)[C@@]1(CO[Si](C)(C)C)CC[C@@H](O[Si](C)(C)C)C[C@H]1C[C@H]3O[Si](C)(C)C	3429.2	Semi standard non polar	33892256
3a,7a,12a,19-Tetrahydroxy-5b-cholanoic acid,3TMS,isomer #2	C[C@H](CCC(=O)O[Si](C)(C)C)[C@H]1CC[C@H]2[C@H]3[C@H](C[C@H](O[Si](C)(C)C)[C@@]21C)[C@@]1(CO)CC[C@@H](O[Si](C)(C)C)C[C@H]1C[C@H]3O	3461.4	Semi standard non polar	33892256
3a,7a,12a,19-Tetrahydroxy-5b-cholanoic acid,3TMS,isomer #3	C[C@H](CCC(=O)O[Si](C)(C)C)[C@H]1CC[C@H]2[C@H]3[C@H](C[C@H](O[Si](C)(C)C)[C@@]21C)[C@@]1(CO)CC[C@@H](O)C[C@H]1C[C@H]3O[Si](C)(C)C	3436.3	Semi standard non polar	33892256
3a,7a,12a,19-Tetrahydroxy-5b-cholanoic acid,3TMS,isomer #4	C[C@H](CCC(=O)O[Si](C)(C)C)[C@H]1CC[C@H]2[C@H]3[C@H](C[C@H](O)[C@@]21C)[C@@]1(CO[Si](C)(C)C)CC[C@@H](O[Si](C)(C)C)C[C@H]1C[C@H]3O	3455.8	Semi standard non polar	33892256
3a,7a,12a,19-Tetrahydroxy-5b-cholanoic acid,3TMS,isomer #5	C[C@H](CCC(=O)O[Si](C)(C)C)[C@H]1CC[C@H]2[C@H]3[C@H](C[C@H](O)[C@@]21C)[C@@]1(CO[Si](C)(C)C)CC[C@@H](O)C[C@H]1C[C@H]3O[Si](C)(C)C	3413.8	Semi standard non polar	33892256
3a,7a,12a,19-Tetrahydroxy-5b-cholanoic acid,3TMS,isomer #6	C[C@H](CCC(=O)O[Si](C)(C)C)[C@H]1CC[C@H]2[C@H]3[C@H](C[C@H](O)[C@@]21C)[C@@]1(CO)CC[C@@H](O[Si](C)(C)C)C[C@H]1C[C@H]3O[Si](C)(C)C	3414.6	Semi standard non polar	33892256
3a,7a,12a,19-Tetrahydroxy-5b-cholanoic acid,3TMS,isomer #7	C[C@H](CCC(=O)O)[C@H]1CC[C@H]2[C@H]3[C@H](C[C@H](O[Si](C)(C)C)[C@@]21C)[C@@]1(CO[Si](C)(C)C)CC[C@@H](O[Si](C)(C)C)C[C@H]1C[C@H]3O	3451.8	Semi standard non polar	33892256
3a,7a,12a,19-Tetrahydroxy-5b-cholanoic acid,3TMS,isomer #8	C[C@H](CCC(=O)O)[C@H]1CC[C@H]2[C@H]3[C@H](C[C@H](O[Si](C)(C)C)[C@@]21C)[C@@]1(CO[Si](C)(C)C)CC[C@@H](O)C[C@H]1C[C@H]3O[Si](C)(C)C	3443.4	Semi standard non polar	33892256
3a,7a,12a,19-Tetrahydroxy-5b-cholanoic acid,3TMS,isomer #9	C[C@H](CCC(=O)O)[C@H]1CC[C@H]2[C@H]3[C@H](C[C@H](O[Si](C)(C)C)[C@@]21C)[C@@]1(CO)CC[C@@H](O[Si](C)(C)C)C[C@H]1C[C@H]3O[Si](C)(C)C	3435.5	Semi standard non polar	33892256
3a,7a,12a,19-Tetrahydroxy-5b-cholanoic acid,4TMS,isomer #1	C[C@H](CCC(=O)O[Si](C)(C)C)[C@H]1CC[C@H]2[C@H]3[C@H](C[C@H](O[Si](C)(C)C)[C@@]21C)[C@@]1(CO[Si](C)(C)C)CC[C@@H](O[Si](C)(C)C)C[C@H]1C[C@H]3O	3430.4	Semi standard non polar	33892256
3a,7a,12a,19-Tetrahydroxy-5b-cholanoic acid,4TMS,isomer #2	C[C@H](CCC(=O)O[Si](C)(C)C)[C@H]1CC[C@H]2[C@H]3[C@H](C[C@H](O[Si](C)(C)C)[C@@]21C)[C@@]1(CO[Si](C)(C)C)CC[C@@H](O)C[C@H]1C[C@H]3O[Si](C)(C)C	3435.7	Semi standard non polar	33892256
3a,7a,12a,19-Tetrahydroxy-5b-cholanoic acid,4TMS,isomer #3	C[C@H](CCC(=O)O[Si](C)(C)C)[C@H]1CC[C@H]2[C@H]3[C@H](C[C@H](O[Si](C)(C)C)[C@@]21C)[C@@]1(CO)CC[C@@H](O[Si](C)(C)C)C[C@H]1C[C@H]3O[Si](C)(C)C	3411.4	Semi standard non polar	33892256
3a,7a,12a,19-Tetrahydroxy-5b-cholanoic acid,4TMS,isomer #4	C[C@H](CCC(=O)O[Si](C)(C)C)[C@H]1CC[C@H]2[C@H]3[C@H](C[C@H](O)[C@@]21C)[C@@]1(CO[Si](C)(C)C)CC[C@@H](O[Si](C)(C)C)C[C@H]1C[C@H]3O[Si](C)(C)C	3416.5	Semi standard non polar	33892256
3a,7a,12a,19-Tetrahydroxy-5b-cholanoic acid,4TMS,isomer #5	C[C@H](CCC(=O)O)[C@H]1CC[C@H]2[C@H]3[C@H](C[C@H](O[Si](C)(C)C)[C@@]21C)[C@@]1(CO[Si](C)(C)C)CC[C@@H](O[Si](C)(C)C)C[C@H]1C[C@H]3O[Si](C)(C)C	3426.1	Semi standard non polar	33892256
3a,7a,12a,19-Tetrahydroxy-5b-cholanoic acid,5TMS,isomer #1	C[C@H](CCC(=O)O[Si](C)(C)C)[C@H]1CC[C@H]2[C@H]3[C@H](C[C@H](O[Si](C)(C)C)[C@@]21C)[C@@]1(CO[Si](C)(C)C)CC[C@@H](O[Si](C)(C)C)C[C@H]1C[C@H]3O[Si](C)(C)C	3432.5	Semi standard non polar	33892256
3a,7a,12a,19-Tetrahydroxy-5b-cholanoic acid,1TBDMS,isomer #1	C[C@H](CCC(=O)O[Si](C)(C)C(C)(C)C)[C@H]1CC[C@H]2[C@H]3[C@H](C[C@H](O)[C@@]21C)[C@@]1(CO)CC[C@@H](O)C[C@H]1C[C@H]3O	3810.1	Semi standard non polar	33892256
3a,7a,12a,19-Tetrahydroxy-5b-cholanoic acid,1TBDMS,isomer #2	C[C@H](CCC(=O)O)[C@H]1CC[C@H]2[C@H]3[C@H](C[C@H](O[Si](C)(C)C(C)(C)C)[C@@]21C)[C@@]1(CO)CC[C@@H](O)C[C@H]1C[C@H]3O	3771.4	Semi standard non polar	33892256
3a,7a,12a,19-Tetrahydroxy-5b-cholanoic acid,1TBDMS,isomer #3	C[C@H](CCC(=O)O)[C@H]1CC[C@H]2[C@H]3[C@H](C[C@H](O)[C@@]21C)[C@@]1(CO)CC[C@@H](O)C[C@H]1C[C@H]3O[Si](C)(C)C(C)(C)C	3737.8	Semi standard non polar	33892256
3a,7a,12a,19-Tetrahydroxy-5b-cholanoic acid,1TBDMS,isomer #4	C[C@H](CCC(=O)O)[C@H]1CC[C@H]2[C@H]3[C@H](C[C@H](O)[C@@]21C)[C@@]1(CO)CC[C@@H](O[Si](C)(C)C(C)(C)C)C[C@H]1C[C@H]3O	3810.5	Semi standard non polar	33892256
3a,7a,12a,19-Tetrahydroxy-5b-cholanoic acid,1TBDMS,isomer #5	C[C@H](CCC(=O)O)[C@H]1CC[C@H]2[C@H]3[C@H](C[C@H](O)[C@@]21C)[C@@]1(CO[Si](C)(C)C(C)(C)C)CC[C@@H](O)C[C@H]1C[C@H]3O	3750.0	Semi standard non polar	33892256
3a,7a,12a,19-Tetrahydroxy-5b-cholanoic acid,2TBDMS,isomer #1	C[C@H](CCC(=O)O[Si](C)(C)C(C)(C)C)[C@H]1CC[C@H]2[C@H]3[C@H](C[C@H](O[Si](C)(C)C(C)(C)C)[C@@]21C)[C@@]1(CO)CC[C@@H](O)C[C@H]1C[C@H]3O	3942.6	Semi standard non polar	33892256
3a,7a,12a,19-Tetrahydroxy-5b-cholanoic acid,2TBDMS,isomer #10	C[C@H](CCC(=O)O)[C@H]1CC[C@H]2[C@H]3[C@H](C[C@H](O)[C@@]21C)[C@@]1(CO[Si](C)(C)C(C)(C)C)CC[C@@H](O[Si](C)(C)C(C)(C)C)C[C@H]1C[C@H]3O	3944.7	Semi standard non polar	33892256
3a,7a,12a,19-Tetrahydroxy-5b-cholanoic acid,2TBDMS,isomer #2	C[C@H](CCC(=O)O[Si](C)(C)C(C)(C)C)[C@H]1CC[C@H]2[C@H]3[C@H](C[C@H](O)[C@@]21C)[C@@]1(CO[Si](C)(C)C(C)(C)C)CC[C@@H](O)C[C@H]1C[C@H]3O	3926.3	Semi standard non polar	33892256
3a,7a,12a,19-Tetrahydroxy-5b-cholanoic acid,2TBDMS,isomer #3	C[C@H](CCC(=O)O[Si](C)(C)C(C)(C)C)[C@H]1CC[C@H]2[C@H]3[C@H](C[C@H](O)[C@@]21C)[C@@]1(CO)CC[C@@H](O[Si](C)(C)C(C)(C)C)C[C@H]1C[C@H]3O	3984.0	Semi standard non polar	33892256
3a,7a,12a,19-Tetrahydroxy-5b-cholanoic acid,2TBDMS,isomer #4	C[C@H](CCC(=O)O[Si](C)(C)C(C)(C)C)[C@H]1CC[C@H]2[C@H]3[C@H](C[C@H](O)[C@@]21C)[C@@]1(CO)CC[C@@H](O)C[C@H]1C[C@H]3O[Si](C)(C)C(C)(C)C	3891.7	Semi standard non polar	33892256
3a,7a,12a,19-Tetrahydroxy-5b-cholanoic acid,2TBDMS,isomer #5	C[C@H](CCC(=O)O)[C@H]1CC[C@H]2[C@H]3[C@H](C[C@H](O[Si](C)(C)C(C)(C)C)[C@@]21C)[C@@]1(CO[Si](C)(C)C(C)(C)C)CC[C@@H](O)C[C@H]1C[C@H]3O	3912.6	Semi standard non polar	33892256
3a,7a,12a,19-Tetrahydroxy-5b-cholanoic acid,2TBDMS,isomer #6	C[C@H](CCC(=O)O)[C@H]1CC[C@H]2[C@H]3[C@H](C[C@H](O[Si](C)(C)C(C)(C)C)[C@@]21C)[C@@]1(CO)CC[C@@H](O[Si](C)(C)C(C)(C)C)C[C@H]1C[C@H]3O	3934.8	Semi standard non polar	33892256
3a,7a,12a,19-Tetrahydroxy-5b-cholanoic acid,2TBDMS,isomer #7	C[C@H](CCC(=O)O)[C@H]1CC[C@H]2[C@H]3[C@H](C[C@H](O[Si](C)(C)C(C)(C)C)[C@@]21C)[C@@]1(CO)CC[C@@H](O)C[C@H]1C[C@H]3O[Si](C)(C)C(C)(C)C	3894.9	Semi standard non polar	33892256
3a,7a,12a,19-Tetrahydroxy-5b-cholanoic acid,2TBDMS,isomer #8	C[C@H](CCC(=O)O)[C@H]1CC[C@H]2[C@H]3[C@H](C[C@H](O)[C@@]21C)[C@@]1(CO[Si](C)(C)C(C)(C)C)CC[C@@H](O)C[C@H]1C[C@H]3O[Si](C)(C)C(C)(C)C	3887.0	Semi standard non polar	33892256
3a,7a,12a,19-Tetrahydroxy-5b-cholanoic acid,2TBDMS,isomer #9	C[C@H](CCC(=O)O)[C@H]1CC[C@H]2[C@H]3[C@H](C[C@H](O)[C@@]21C)[C@@]1(CO)CC[C@@H](O[Si](C)(C)C(C)(C)C)C[C@H]1C[C@H]3O[Si](C)(C)C(C)(C)C	3899.2	Semi standard non polar	33892256
3a,7a,12a,19-Tetrahydroxy-5b-cholanoic acid,3TBDMS,isomer #1	C[C@H](CCC(=O)O[Si](C)(C)C(C)(C)C)[C@H]1CC[C@H]2[C@H]3[C@H](C[C@H](O[Si](C)(C)C(C)(C)C)[C@@]21C)[C@@]1(CO[Si](C)(C)C(C)(C)C)CC[C@@H](O)C[C@H]1C[C@H]3O	4111.0	Semi standard non polar	33892256
3a,7a,12a,19-Tetrahydroxy-5b-cholanoic acid,3TBDMS,isomer #10	C[C@H](CCC(=O)O)[C@H]1CC[C@H]2[C@H]3[C@H](C[C@H](O)[C@@]21C)[C@@]1(CO[Si](C)(C)C(C)(C)C)CC[C@@H](O[Si](C)(C)C(C)(C)C)C[C@H]1C[C@H]3O[Si](C)(C)C(C)(C)C	4102.1	Semi standard non polar	33892256
3a,7a,12a,19-Tetrahydroxy-5b-cholanoic acid,3TBDMS,isomer #2	C[C@H](CCC(=O)O[Si](C)(C)C(C)(C)C)[C@H]1CC[C@H]2[C@H]3[C@H](C[C@H](O[Si](C)(C)C(C)(C)C)[C@@]21C)[C@@]1(CO)CC[C@@H](O[Si](C)(C)C(C)(C)C)C[C@H]1C[C@H]3O	4122.0	Semi standard non polar	33892256
3a,7a,12a,19-Tetrahydroxy-5b-cholanoic acid,3TBDMS,isomer #3	C[C@H](CCC(=O)O[Si](C)(C)C(C)(C)C)[C@H]1CC[C@H]2[C@H]3[C@H](C[C@H](O[Si](C)(C)C(C)(C)C)[C@@]21C)[C@@]1(CO)CC[C@@H](O)C[C@H]1C[C@H]3O[Si](C)(C)C(C)(C)C	4074.0	Semi standard non polar	33892256
3a,7a,12a,19-Tetrahydroxy-5b-cholanoic acid,3TBDMS,isomer #4	C[C@H](CCC(=O)O[Si](C)(C)C(C)(C)C)[C@H]1CC[C@H]2[C@H]3[C@H](C[C@H](O)[C@@]21C)[C@@]1(CO[Si](C)(C)C(C)(C)C)CC[C@@H](O[Si](C)(C)C(C)(C)C)C[C@H]1C[C@H]3O	4136.4	Semi standard non polar	33892256
3a,7a,12a,19-Tetrahydroxy-5b-cholanoic acid,3TBDMS,isomer #5	C[C@H](CCC(=O)O[Si](C)(C)C(C)(C)C)[C@H]1CC[C@H]2[C@H]3[C@H](C[C@H](O)[C@@]21C)[C@@]1(CO[Si](C)(C)C(C)(C)C)CC[C@@H](O)C[C@H]1C[C@H]3O[Si](C)(C)C(C)(C)C	4072.0	Semi standard non polar	33892256
3a,7a,12a,19-Tetrahydroxy-5b-cholanoic acid,3TBDMS,isomer #6	C[C@H](CCC(=O)O[Si](C)(C)C(C)(C)C)[C@H]1CC[C@H]2[C@H]3[C@H](C[C@H](O)[C@@]21C)[C@@]1(CO)CC[C@@H](O[Si](C)(C)C(C)(C)C)C[C@H]1C[C@H]3O[Si](C)(C)C(C)(C)C	4077.8	Semi standard non polar	33892256
3a,7a,12a,19-Tetrahydroxy-5b-cholanoic acid,3TBDMS,isomer #7	C[C@H](CCC(=O)O)[C@H]1CC[C@H]2[C@H]3[C@H](C[C@H](O[Si](C)(C)C(C)(C)C)[C@@]21C)[C@@]1(CO[Si](C)(C)C(C)(C)C)CC[C@@H](O[Si](C)(C)C(C)(C)C)C[C@H]1C[C@H]3O	4120.4	Semi standard non polar	33892256
3a,7a,12a,19-Tetrahydroxy-5b-cholanoic acid,3TBDMS,isomer #8	C[C@H](CCC(=O)O)[C@H]1CC[C@H]2[C@H]3[C@H](C[C@H](O[Si](C)(C)C(C)(C)C)[C@@]21C)[C@@]1(CO[Si](C)(C)C(C)(C)C)CC[C@@H](O)C[C@H]1C[C@H]3O[Si](C)(C)C(C)(C)C	4096.9	Semi standard non polar	33892256
3a,7a,12a,19-Tetrahydroxy-5b-cholanoic acid,3TBDMS,isomer #9	C[C@H](CCC(=O)O)[C@H]1CC[C@H]2[C@H]3[C@H](C[C@H](O[Si](C)(C)C(C)(C)C)[C@@]21C)[C@@]1(CO)CC[C@@H](O[Si](C)(C)C(C)(C)C)C[C@H]1C[C@H]3O[Si](C)(C)C(C)(C)C	4090.2	Semi standard non polar	33892256
3a,7a,12a,19-Tetrahydroxy-5b-cholanoic acid,4TBDMS,isomer #1	C[C@H](CCC(=O)O[Si](C)(C)C(C)(C)C)[C@H]1CC[C@H]2[C@H]3[C@H](C[C@H](O[Si](C)(C)C(C)(C)C)[C@@]21C)[C@@]1(CO[Si](C)(C)C(C)(C)C)CC[C@@H](O[Si](C)(C)C(C)(C)C)C[C@H]1C[C@H]3O	4322.4	Semi standard non polar	33892256
3a,7a,12a,19-Tetrahydroxy-5b-cholanoic acid,4TBDMS,isomer #2	C[C@H](CCC(=O)O[Si](C)(C)C(C)(C)C)[C@H]1CC[C@H]2[C@H]3[C@H](C[C@H](O[Si](C)(C)C(C)(C)C)[C@@]21C)[C@@]1(CO[Si](C)(C)C(C)(C)C)CC[C@@H](O)C[C@H]1C[C@H]3O[Si](C)(C)C(C)(C)C	4294.5	Semi standard non polar	33892256
3a,7a,12a,19-Tetrahydroxy-5b-cholanoic acid,4TBDMS,isomer #3	C[C@H](CCC(=O)O[Si](C)(C)C(C)(C)C)[C@H]1CC[C@H]2[C@H]3[C@H](C[C@H](O[Si](C)(C)C(C)(C)C)[C@@]21C)[C@@]1(CO)CC[C@@H](O[Si](C)(C)C(C)(C)C)C[C@H]1C[C@H]3O[Si](C)(C)C(C)(C)C	4264.0	Semi standard non polar	33892256
3a,7a,12a,19-Tetrahydroxy-5b-cholanoic acid,4TBDMS,isomer #4	C[C@H](CCC(=O)O[Si](C)(C)C(C)(C)C)[C@H]1CC[C@H]2[C@H]3[C@H](C[C@H](O)[C@@]21C)[C@@]1(CO[Si](C)(C)C(C)(C)C)CC[C@@H](O[Si](C)(C)C(C)(C)C)C[C@H]1C[C@H]3O[Si](C)(C)C(C)(C)C	4298.4	Semi standard non polar	33892256
3a,7a,12a,19-Tetrahydroxy-5b-cholanoic acid,4TBDMS,isomer #5	C[C@H](CCC(=O)O)[C@H]1CC[C@H]2[C@H]3[C@H](C[C@H](O[Si](C)(C)C(C)(C)C)[C@@]21C)[C@@]1(CO[Si](C)(C)C(C)(C)C)CC[C@@H](O[Si](C)(C)C(C)(C)C)C[C@H]1C[C@H]3O[Si](C)(C)C(C)(C)C	4306.9	Semi standard non polar	33892256

Spectra

GC-MS Spectra

Spectrum Type	Description	Splash Key	Deposition Date	Source	View
Predicted GC-MS	Predicted GC-MS Spectrum - 3a,7a,12a,19-Tetrahydroxy-5b-cholanoic acid GC-MS (Non-derivatized) - 70eV, Positive	splash10-0bu3-0569200000-c724deddea0794c171b6	2017-09-01	Wishart Lab	View Spectrum
Predicted GC-MS	Predicted GC-MS Spectrum - 3a,7a,12a,19-Tetrahydroxy-5b-cholanoic acid GC-MS (3 TMS) - 70eV, Positive	splash10-004i-2100159000-6e1fcf87c606060d30cc	2017-10-06	Wishart Lab	View Spectrum
Predicted GC-MS	Predicted GC-MS Spectrum - 3a,7a,12a,19-Tetrahydroxy-5b-cholanoic acid GC-MS (Non-derivatized) - 70eV, Positive	Not Available	2021-10-12	Wishart Lab	View Spectrum
Predicted GC-MS	Predicted GC-MS Spectrum - 3a,7a,12a,19-Tetrahydroxy-5b-cholanoic acid GC-MS (TMS_1_1) - 70eV, Positive	Not Available	2021-11-05	Wishart Lab	View Spectrum
Predicted GC-MS	Predicted GC-MS Spectrum - 3a,7a,12a,19-Tetrahydroxy-5b-cholanoic acid GC-MS (TMS_1_2) - 70eV, Positive	Not Available	2021-11-05	Wishart Lab	View Spectrum
Predicted GC-MS	Predicted GC-MS Spectrum - 3a,7a,12a,19-Tetrahydroxy-5b-cholanoic acid GC-MS (TMS_1_3) - 70eV, Positive	Not Available	2021-11-05	Wishart Lab	View Spectrum
Predicted GC-MS	Predicted GC-MS Spectrum - 3a,7a,12a,19-Tetrahydroxy-5b-cholanoic acid GC-MS (TMS_1_4) - 70eV, Positive	Not Available	2021-11-05	Wishart Lab	View Spectrum
Predicted GC-MS	Predicted GC-MS Spectrum - 3a,7a,12a,19-Tetrahydroxy-5b-cholanoic acid GC-MS (TMS_1_5) - 70eV, Positive	Not Available	2021-11-05	Wishart Lab	View Spectrum
Predicted GC-MS	Predicted GC-MS Spectrum - 3a,7a,12a,19-Tetrahydroxy-5b-cholanoic acid GC-MS (TMS_2_1) - 70eV, Positive	Not Available	2021-11-05	Wishart Lab	View Spectrum
Predicted GC-MS	Predicted GC-MS Spectrum - 3a,7a,12a,19-Tetrahydroxy-5b-cholanoic acid GC-MS (TMS_2_2) - 70eV, Positive	Not Available	2021-11-05	Wishart Lab	View Spectrum
Predicted GC-MS	Predicted GC-MS Spectrum - 3a,7a,12a,19-Tetrahydroxy-5b-cholanoic acid GC-MS (TMS_2_3) - 70eV, Positive	Not Available	2021-11-05	Wishart Lab	View Spectrum
Predicted GC-MS	Predicted GC-MS Spectrum - 3a,7a,12a,19-Tetrahydroxy-5b-cholanoic acid GC-MS (TMS_2_4) - 70eV, Positive	Not Available	2021-11-05	Wishart Lab	View Spectrum
Predicted GC-MS	Predicted GC-MS Spectrum - 3a,7a,12a,19-Tetrahydroxy-5b-cholanoic acid GC-MS (TMS_2_5) - 70eV, Positive	Not Available	2021-11-05	Wishart Lab	View Spectrum
Predicted GC-MS	Predicted GC-MS Spectrum - 3a,7a,12a,19-Tetrahydroxy-5b-cholanoic acid GC-MS (TMS_2_6) - 70eV, Positive	Not Available	2021-11-05	Wishart Lab	View Spectrum
Predicted GC-MS	Predicted GC-MS Spectrum - 3a,7a,12a,19-Tetrahydroxy-5b-cholanoic acid GC-MS (TMS_2_7) - 70eV, Positive	Not Available	2021-11-05	Wishart Lab	View Spectrum
Predicted GC-MS	Predicted GC-MS Spectrum - 3a,7a,12a,19-Tetrahydroxy-5b-cholanoic acid GC-MS (TMS_2_8) - 70eV, Positive	Not Available	2021-11-05	Wishart Lab	View Spectrum
Predicted GC-MS	Predicted GC-MS Spectrum - 3a,7a,12a,19-Tetrahydroxy-5b-cholanoic acid GC-MS (TMS_2_9) - 70eV, Positive	Not Available	2021-11-05	Wishart Lab	View Spectrum
Predicted GC-MS	Predicted GC-MS Spectrum - 3a,7a,12a,19-Tetrahydroxy-5b-cholanoic acid GC-MS (TMS_2_10) - 70eV, Positive	Not Available	2021-11-05	Wishart Lab	View Spectrum
Predicted GC-MS	Predicted GC-MS Spectrum - 3a,7a,12a,19-Tetrahydroxy-5b-cholanoic acid GC-MS (TMS_3_2) - 70eV, Positive	Not Available	2021-11-05	Wishart Lab	View Spectrum
Predicted GC-MS	Predicted GC-MS Spectrum - 3a,7a,12a,19-Tetrahydroxy-5b-cholanoic acid GC-MS (TMS_3_3) - 70eV, Positive	Not Available	2021-11-05	Wishart Lab	View Spectrum
Predicted GC-MS	Predicted GC-MS Spectrum - 3a,7a,12a,19-Tetrahydroxy-5b-cholanoic acid GC-MS (TMS_3_4) - 70eV, Positive	Not Available	2021-11-05	Wishart Lab	View Spectrum
Predicted GC-MS	Predicted GC-MS Spectrum - 3a,7a,12a,19-Tetrahydroxy-5b-cholanoic acid GC-MS (TMS_3_5) - 70eV, Positive	Not Available	2021-11-05	Wishart Lab	View Spectrum
Predicted GC-MS	Predicted GC-MS Spectrum - 3a,7a,12a,19-Tetrahydroxy-5b-cholanoic acid GC-MS (TMS_3_6) - 70eV, Positive	Not Available	2021-11-05	Wishart Lab	View Spectrum
Predicted GC-MS	Predicted GC-MS Spectrum - 3a,7a,12a,19-Tetrahydroxy-5b-cholanoic acid GC-MS (TMS_3_7) - 70eV, Positive	Not Available	2021-11-05	Wishart Lab	View Spectrum
Predicted GC-MS	Predicted GC-MS Spectrum - 3a,7a,12a,19-Tetrahydroxy-5b-cholanoic acid GC-MS (TMS_3_8) - 70eV, Positive	Not Available	2021-11-05	Wishart Lab	View Spectrum

MS/MS Spectra

Spectrum Type	Description	Splash Key	Deposition Date	Source	View
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 3a,7a,12a,19-Tetrahydroxy-5b-cholanoic acid 10V, Positive-QTOF	splash10-052r-0009600000-70600db74b6acb61211c	2017-09-01	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 3a,7a,12a,19-Tetrahydroxy-5b-cholanoic acid 20V, Positive-QTOF	splash10-000i-0009100000-49c2cffe03e2e60f22fe	2017-09-01	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 3a,7a,12a,19-Tetrahydroxy-5b-cholanoic acid 40V, Positive-QTOF	splash10-002k-1109000000-ccd4aca8f0bff807a8e6	2017-09-01	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 3a,7a,12a,19-Tetrahydroxy-5b-cholanoic acid 10V, Negative-QTOF	splash10-05fr-0003900000-8adfc90518b7a32e1a65	2017-09-01	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 3a,7a,12a,19-Tetrahydroxy-5b-cholanoic acid 20V, Negative-QTOF	splash10-0a6r-1009700000-30bd509011b013a0bb85	2017-09-01	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 3a,7a,12a,19-Tetrahydroxy-5b-cholanoic acid 40V, Negative-QTOF	splash10-0a6u-7009000000-3b2d081017bbf7ce399a	2017-09-01	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 3a,7a,12a,19-Tetrahydroxy-5b-cholanoic acid 10V, Positive-QTOF	splash10-0570-0008900000-1257dece5f78104794f9	2021-09-25	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 3a,7a,12a,19-Tetrahydroxy-5b-cholanoic acid 20V, Positive-QTOF	splash10-0550-1009100000-69f08f15b2ecae209b5e	2021-09-25	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 3a,7a,12a,19-Tetrahydroxy-5b-cholanoic acid 40V, Positive-QTOF	splash10-0a59-9770000000-c6a1204ae4e44ba4c905	2021-09-25	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 3a,7a,12a,19-Tetrahydroxy-5b-cholanoic acid 10V, Negative-QTOF	splash10-00di-0000900000-fd0b098a165473974103	2021-09-25	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 3a,7a,12a,19-Tetrahydroxy-5b-cholanoic acid 20V, Negative-QTOF	splash10-00di-0002900000-522cde860acb86cd80f5	2021-09-25	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 3a,7a,12a,19-Tetrahydroxy-5b-cholanoic acid 40V, Negative-QTOF	splash10-004m-0019100000-49bd77c03794201e6eaa	2021-09-25	Wishart Lab	View Spectrum

Biological Properties

Cellular Locations

Extracellular

Biospecimen Locations

Not Available

Tissue Locations

Gall Bladder
Intestine

Pathways

Not Available

Name	SMPDB/PathBank	KEGG

Normal Concentrations

Not Available

Abnormal Concentrations

Not Available

Associated Disorders and Diseases

Disease References

None

Associated OMIM IDs

None

External Links

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FooDB ID

FDB021964

KNApSAcK ID

Not Available

Chemspider ID

4446993

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

5329

PubChem Compound

5283905

PDB ID

Not Available

ChEBI ID

Not Available

Food Biomarker Ontology

Not Available

VMH ID

Not Available

MarkerDB ID

Not Available

Good Scents ID

Not Available

References

Synthesis Reference

Kurosawa, Takao; Nomura, Yukihiro; Mahara, Reijiro; Yoshimura, Teruki; Kimura, Akihiko; Ikegawa, Shigeo; Tohma, Masahiko. Synthesis of 19-hydroxylated bile acids and identification of 3a,7a,12a,19-tetrahydroxy-5b-cholan-24-oic acid in human neonatal urine. Chem Pharm Bull (Tokyo). 1995 Sep;43(9):1551-7.

Material Safety Data Sheet (MSDS)

Not Available

General References

Ohdoi C, Nyhan WL, Kuhara T: Chemical diagnosis of Lesch-Nyhan syndrome using gas chromatography-mass spectrometry detection. J Chromatogr B Analyt Technol Biomed Life Sci. 2003 Jul 15;792(1):123-30. [PubMed:12829005 ]
Kimura A, Mahara R, Inoue T, Nomura Y, Murai T, Kurosawa T, Tohma M, Noguchi K, Hoshiyama A, Fujisawa T, Kato H: Profile of urinary bile acids in infants and children: developmental pattern of excretion of unsaturated ketonic bile acids and 7beta-hydroxylated bile acids. Pediatr Res. 1999 Apr;45(4 Pt 1):603-9. [PubMed:10203155 ]

Enzymes

Enzyme Details

1. Gastrotropin

General function:: Involved in binding
Specific function:: Ileal protein which stimulates gastric acid and pepsinogen secretion. Seems to be able to bind to bile salts and bilirubins. Isoform 2 is essential for the survival of colon cancer cells to bile acid-induced apoptosis
Gene Name:: FABP6
Uniprot ID:: P51161
Molecular weight:: 14371.2

References

Kurz M, Brachvogel V, Matter H, Stengelin S, Thuring H, Kramer W: Insights into the bile acid transportation system: the human ileal lipid-binding protein-cholyltaurine complex and its comparison with homologous structures. Proteins. 2003 Feb 1;50(2):312-28. [PubMed:12486725 ]

Transporters

Enzyme Details

1. Solute carrier organic anion transporter family member 1B3

General function:: Involved in transporter activity
Specific function:: Mediates the Na(+)-independent transport of organic anions such as 17-beta-glucuronosyl estradiol, taurocholate, triiodothyronine (T3), leukotriene C4, dehydroepiandrosterone sulfate (DHEAS), methotrexate and sulfobromophthalein (BSP)
Gene Name:: SLCO1B3
Uniprot ID:: Q9NPD5
Molecular weight:: 77402.2

Enzyme Details

2. Solute carrier organic anion transporter family member 1B1

General function:: Involved in transporter activity
Specific function:: Mediates the Na(+)-independent transport of organic anions such as pravastatin, taurocholate, methotrexate, dehydroepiandrosterone sulfate, 17-beta-glucuronosyl estradiol, estrone sulfate, prostaglandin E2, thromboxane B2, leukotriene C3, leukotriene E4, thyroxine and triiodothyronine. May play an important role in the clearance of bile acids and organic anions from the liver
Gene Name:: SLCO1B1
Uniprot ID:: Q9Y6L6
Molecular weight:: 76448.0

References

Michalski C, Cui Y, Nies AT, Nuessler AK, Neuhaus P, Zanger UM, Klein K, Eichelbaum M, Keppler D, Konig J: A naturally occurring mutation in the SLC21A6 gene causing impaired membrane localization of the hepatocyte uptake transporter. J Biol Chem. 2002 Nov 8;277(45):43058-63. Epub 2002 Aug 23. [PubMed:12196548 ]

Enzyme Details

3. Canalicular multispecific organic anion transporter 2

General function:: Involved in ATP binding
Specific function:: May act as an inducible transporter in the biliary and intestinal excretion of organic anions. Acts as an alternative route for the export of bile acids and glucuronides from cholestatic hepatocytes
Gene Name:: ABCC3
Uniprot ID:: O15438
Molecular weight:: 169341.1

Enzyme Details

4. Bile salt export pump

General function:: Involved in ATP binding
Specific function:: Involved in the ATP-dependent secretion of bile salts into the canaliculus of hepatocytes
Gene Name:: ABCB11
Uniprot ID:: O95342
Molecular weight:: 146405.8

Enzyme Details

5. Ileal sodium/bile acid cotransporter

General function:: Involved in bile acid:sodium symporter activity
Specific function:: Plays a critical role in the sodium-dependent reabsorption of bile acids from the lumen of the small intestine. Plays a key role in cholesterol metabolism
Gene Name:: SLC10A2
Uniprot ID:: Q12908
Molecular weight:: 37697.4

References

Kramer W, Girbig F, Glombik H, Corsiero D, Stengelin S, Weyland C: Identification of a ligand-binding site in the Na+/bile acid cotransporting protein from rabbit ileum. J Biol Chem. 2001 Sep 21;276(38):36020-7. Epub 2001 Jul 10. [PubMed:11447228 ]

Enzyme Details

6. Sodium/bile acid cotransporter

General function:: Involved in bile acid:sodium symporter activity
Specific function:: The hepatic sodium/bile acid uptake system exhibits broad substrate specificity and transports various non-bile acid organic compounds as well. It is strictly dependent on the extracellular presence of sodium.
Gene Name:: SLC10A1
Uniprot ID:: Q14973
Molecular weight:: 38118.64

Enzyme Details

7. Solute carrier organic anion transporter family member 1A2

General function:: Involved in transporter activity
Specific function:: Mediates the Na(+)-independent transport of organic anions such as sulfobromophthalein (BSP) and conjugated (taurocholate) and unconjugated (cholate) bile acids
Gene Name:: SLCO1A2
Uniprot ID:: P46721
Molecular weight:: 74144.1

Enzyme Details

8. Solute carrier organic anion transporter family member 4A1

General function:: Involved in transporter activity
Specific function:: Mediates the Na(+)-independent transport of organic anions such as the thyroid hormones T3 (triiodo-L-thyronine), T4 (thyroxine) and rT3, and of estrone-3-sulfate and taurocholate
Gene Name:: SLCO4A1
Uniprot ID:: Q96BD0
Molecular weight:: 77192.5

Showing metabocard for 3a,7a,12a,19-Tetrahydroxy-5b-cholanoic acid (HMDB0000340)

MOL for HMDB0000340 (3a,7a,12a,19-Tetrahydroxy-5b-cholanoic acid)

3D MOL for HMDB0000340 (3a,7a,12a,19-Tetrahydroxy-5b-cholanoic acid)

3D SDF for HMDB0000340 (3a,7a,12a,19-Tetrahydroxy-5b-cholanoic acid)

3D-SDF for HMDB0000340 (3a,7a,12a,19-Tetrahydroxy-5b-cholanoic acid)

PDB for HMDB0000340 (3a,7a,12a,19-Tetrahydroxy-5b-cholanoic acid)

3D PDB for HMDB0000340 (3a,7a,12a,19-Tetrahydroxy-5b-cholanoic acid)

SMILES for HMDB0000340 (3a,7a,12a,19-Tetrahydroxy-5b-cholanoic acid)

INCHI for HMDB0000340 (3a,7a,12a,19-Tetrahydroxy-5b-cholanoic acid)

Structure for HMDB0000340 (3a,7a,12a,19-Tetrahydroxy-5b-cholanoic acid)

3D Structure for HMDB0000340 (3a,7a,12a,19-Tetrahydroxy-5b-cholanoic acid)

Predicted Collision Cross Sections

Predicted Kovats Retention Indices

Underivatized

Derivatized

GC-MS Spectra

MS/MS Spectra

Enzymes

References

Transporters

References

References