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Record Information
Version5.0
StatusExpected but not Quantified
Creation Date2012-09-11 18:56:25 UTC
Update Date2022-03-07 02:54:00 UTC
HMDB IDHMDB0034145
Secondary Accession Numbers
  • HMDB34145
Metabolite Identification
Common Name(-)-cis-Rotenolone
Description(-)-cis-Rotenolone belongs to the class of organic compounds known as rotenones. These are rotenoids with a structure based on a 6a,12a-dihydrochromeno[3,4-b]chromen-12(6H)-one skeleton (-)-cis-Rotenolone has been detected, but not quantified in, jicamas (Pachyrhizus erosus) and pulses. This could make (-)-cis-rotenolone a potential biomarker for the consumption of these foods. Based on a literature review very few articles have been published on (-)-cis-Rotenolone.
Structure
Data?1563862518
Synonyms
ValueSource
(-)-cis-12a-HydroxyrotenoneHMDB
1,2,12,12a-tetrahydro-6a-Hydroxy-8,9-dimethoxy-2-(1-methylethenyl)-(2R,6ar,12ar)-[1]benzopyrano[3,4-b]furo[2,3-H][1]benzopyran-6(6ah)-oneHMDB
12-HydroxyrotenoneHMDB
12alpha-HydroxyrotenoneHMDB
6a-beta,12a-beta-RotenoloneHMDB
6Ab,12ab-rotenoloneHMDB
RotenaloneHMDB
Rotenolon IHMDB
RotenoloneHMDB
Rotenolone IHMDB
6 alpha(beta),12 alpha(beta)-RotenoloneMeSH
Rotenolone, (2R-(2alpha,6aalpha,12aalpha))-isomerMeSH
Rotenolone, (2R-(2alpha,6abeta,12aalpha))-isomerMeSH
Rotenolone, (2R-(2alpha,6aalpha,12abeta))-isomerMeSH
Chemical FormulaC23H22O7
Average Molecular Weight410.4166
Monoisotopic Molecular Weight410.136553058
IUPAC Name(1R,6R,13R)-13-hydroxy-16,17-dimethoxy-6-(prop-1-en-2-yl)-2,7,20-trioxapentacyclo[11.8.0.0³,¹¹.0⁴,⁸.0¹⁴,¹⁹]henicosa-3,8,10,14(19),15,17-hexaen-12-one
Traditional Namerotenolone
CAS Registry Number509-96-6
SMILES
[H][C@@]12COC3=C(C=C(OC)C(OC)=C3)[C@]1(O)C(=O)C1=CC=C3O[C@H](CC3=C1O2)C(C)=C
InChI Identifier
InChI=1S/C23H22O7/c1-11(2)16-7-13-15(29-16)6-5-12-21(13)30-20-10-28-17-9-19(27-4)18(26-3)8-14(17)23(20,25)22(12)24/h5-6,8-9,16,20,25H,1,7,10H2,2-4H3/t16-,20-,23-/m1/s1
InChI KeyJFVKWCYZKMUTLH-AYPBNUJASA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as rotenones. These are rotenoids with a structure based on a 6a,12a-dihydrochromeno[3,4-b]chromen-12(6H)-one skeleton.
KingdomOrganic compounds
Super ClassPhenylpropanoids and polyketides
ClassIsoflavonoids
Sub ClassRotenoids
Direct ParentRotenones
Alternative Parents
Substituents
  • Rotenone or derivatives
  • 8-prenylated isoflavanone
  • Isoflavanone
  • Isoflavan
  • Chromone
  • 1-benzopyran
  • Chromane
  • Benzopyran
  • Coumaran
  • Aryl alkyl ketone
  • Aryl ketone
  • Anisole
  • Alkyl aryl ether
  • Benzenoid
  • Tertiary alcohol
  • Ketone
  • Ether
  • Oxacycle
  • Organoheterocyclic compound
  • Organic oxygen compound
  • Alcohol
  • Organooxygen compound
  • Hydrocarbon derivative
  • Organic oxide
  • Aromatic heteropolycyclic compound
Molecular FrameworkAromatic heteropolycyclic compounds
External Descriptors
Ontology
Physiological effectNot Available
Disposition
ProcessNot Available
Role
Physical Properties
StateSolid
Experimental Molecular Properties
PropertyValueReference
Melting Point91 - 92 °CNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
Water Solubility0.056 g/LALOGPS
logP2.4ALOGPS
logP2.73ChemAxon
logS-3.9ALOGPS
pKa (Strongest Acidic)11.08ChemAxon
pKa (Strongest Basic)-4.2ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count7ChemAxon
Hydrogen Donor Count1ChemAxon
Polar Surface Area83.45 ŲChemAxon
Rotatable Bond Count3ChemAxon
Refractivity106.96 m³·mol⁻¹ChemAxon
Polarizability42.8 ųChemAxon
Number of Rings5ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterYesChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DarkChem[M+H]+195.46631661259
DarkChem[M-H]-196.18131661259
DeepCCS[M-2H]-227.64930932474
DeepCCS[M+Na]+203.07330932474
AllCCS[M+H]+199.532859911
AllCCS[M+H-H2O]+196.832859911
AllCCS[M+NH4]+202.032859911
AllCCS[M+Na]+202.732859911
AllCCS[M-H]-202.132859911
AllCCS[M+Na-2H]-202.232859911
AllCCS[M+HCOO]-202.532859911

Predicted Kovats Retention Indices

Underivatized

MetaboliteSMILESKovats RI ValueColumn TypeReference
(-)-cis-Rotenolone[H][C@@]12COC3=C(C=C(OC)C(OC)=C3)[C@]1(O)C(=O)C1=CC=C3O[C@H](CC3=C1O2)C(C)=C4792.1Standard polar33892256
(-)-cis-Rotenolone[H][C@@]12COC3=C(C=C(OC)C(OC)=C3)[C@]1(O)C(=O)C1=CC=C3O[C@H](CC3=C1O2)C(C)=C3259.5Standard non polar33892256
(-)-cis-Rotenolone[H][C@@]12COC3=C(C=C(OC)C(OC)=C3)[C@]1(O)C(=O)C1=CC=C3O[C@H](CC3=C1O2)C(C)=C3212.5Semi standard non polar33892256

Derivatized

Derivative Name / StructureSMILESKovats RI ValueColumn TypeReference
(-)-cis-Rotenolone,1TMS,isomer #1C=C(C)[C@H]1CC2=C(C=CC3=C2O[C@@H]2COC4=CC(OC)=C(OC)C=C4[C@]2(O[Si](C)(C)C)C3=O)O13260.4Semi standard non polar33892256
(-)-cis-Rotenolone,1TBDMS,isomer #1C=C(C)[C@H]1CC2=C(C=CC3=C2O[C@@H]2COC4=CC(OC)=C(OC)C=C4[C@]2(O[Si](C)(C)C(C)(C)C)C3=O)O13472.9Semi standard non polar33892256
Spectra

GC-MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted GC-MSPredicted GC-MS Spectrum - (-)-cis-Rotenolone GC-MS (Non-derivatized) - 70eV, Positivesplash10-0udj-2898000000-a911918046b993e787962017-09-01Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - (-)-cis-Rotenolone GC-MS (1 TMS) - 70eV, Positivesplash10-0v4i-9420700000-d42a2e5be951b642755e2017-10-06Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - (-)-cis-Rotenolone GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (-)-cis-Rotenolone 10V, Positive-QTOFsplash10-03di-1223900000-9a1f17cd964abaa81aa82016-08-01Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (-)-cis-Rotenolone 20V, Positive-QTOFsplash10-0w29-2394300000-b8d33d58c295207f77a32016-08-01Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (-)-cis-Rotenolone 40V, Positive-QTOFsplash10-0udi-2930000000-7ebdad6df07b04059cf42016-08-01Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (-)-cis-Rotenolone 10V, Negative-QTOFsplash10-0a4i-0011900000-068963a903131042e2de2016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (-)-cis-Rotenolone 20V, Negative-QTOFsplash10-0a4i-0059600000-b085e22dff915ed213c12016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (-)-cis-Rotenolone 40V, Negative-QTOFsplash10-0udr-1933000000-acb18ae95eb8c0f59fb92016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (-)-cis-Rotenolone 10V, Negative-QTOFsplash10-0a4i-0000900000-13ca06aa040c9821ae692021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (-)-cis-Rotenolone 20V, Negative-QTOFsplash10-0a4i-0325900000-33ff0fbbe9523120bd612021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (-)-cis-Rotenolone 40V, Negative-QTOFsplash10-0a4i-1869100000-793032f9edca87024cfd2021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (-)-cis-Rotenolone 10V, Positive-QTOFsplash10-03di-0000900000-cc474c0f71581fe9b76f2021-09-23Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (-)-cis-Rotenolone 20V, Positive-QTOFsplash10-03di-0115900000-866e3635b32607356e9c2021-09-23Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (-)-cis-Rotenolone 40V, Positive-QTOFsplash10-0zi0-3395000000-409148100e6d88cb50cd2021-09-23Wishart LabView Spectrum
Biological Properties
Cellular Locations
  • Cytoplasm
  • Extracellular
Biospecimen LocationsNot Available
Tissue LocationsNot Available
Pathways
Normal Concentrations
Not Available
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDFDB012420
KNApSAcK IDC00002537
Chemspider ID61491
KEGG Compound IDC10464
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound68184
PDB IDNot Available
ChEBI IDNot Available
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDNot Available
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General References
  1. (). Yannai, Shmuel. (2004) Dictionary of food compounds with CD-ROM: Additives, flavors, and ingredients. Boca Raton: Chapman & Hall/CRC.. .