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Record Information
Version5.0
StatusExpected but not Quantified
Creation Date2012-09-11 19:26:35 UTC
Update Date2022-03-07 02:54:09 UTC
HMDB IDHMDB0034567
Secondary Accession Numbers
  • HMDB34567
Metabolite Identification
Common Name(3beta,23xi)-3,23-Dihydroxycycloart-24-en-26-oic acid
Description(3beta,23xi)-3,23-Dihydroxycycloart-24-en-26-oic acid belongs to the class of organic compounds known as cycloartanols and derivatives. These are steroids containing a cycloartanol moiety (3beta,23xi)-3,23-Dihydroxycycloart-24-en-26-oic acid is an extremely weak basic (essentially neutral) compound (based on its pKa).
Structure
Data?1563862583
Synonyms
ValueSource
(3b,23XI)-3,23-dihydroxycycloart-24-en-26-OateGenerator
(3b,23XI)-3,23-dihydroxycycloart-24-en-26-Oic acidGenerator
(3beta,23XI)-3,23-dihydroxycycloart-24-en-26-OateGenerator
(3Β,23xi)-3,23-dihydroxycycloart-24-en-26-OateGenerator
(3Β,23xi)-3,23-dihydroxycycloart-24-en-26-Oic acidGenerator
(2Z)-4-Hydroxy-6-{6-hydroxy-7,7,12,16-tetramethylpentacyclo[9.7.0.0¹,³.0³,⁸.0¹²,¹⁶]octadecan-15-yl}-2-methylhept-2-enoateGenerator
Chemical FormulaC30H48O4
Average Molecular Weight472.6997
Monoisotopic Molecular Weight472.355260024
IUPAC Name(2Z)-4-hydroxy-6-{6-hydroxy-7,7,12,16-tetramethylpentacyclo[9.7.0.0¹,³.0³,⁸.0¹²,¹⁶]octadecan-15-yl}-2-methylhept-2-enoic acid
Traditional Name(2Z)-4-hydroxy-6-{6-hydroxy-7,7,12,16-tetramethylpentacyclo[9.7.0.0¹,³.0³,⁸.0¹²,¹⁶]octadecan-15-yl}-2-methylhept-2-enoic acid
CAS Registry NumberNot Available
SMILES
CC(CC(O)\C=C(\C)C(O)=O)C1CCC2(C)C3CCC4C5(CC35CCC12C)CCC(O)C4(C)C
InChI Identifier
InChI=1S/C30H48O4/c1-18(15-20(31)16-19(2)25(33)34)21-9-11-28(6)23-8-7-22-26(3,4)24(32)10-12-29(22)17-30(23,29)14-13-27(21,28)5/h16,18,20-24,31-32H,7-15,17H2,1-6H3,(H,33,34)/b19-16-
InChI KeyMZUPEDPADUBWHX-MNDPQUGUSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as cycloartanols and derivatives. These are steroids containing a cycloartanol moiety.
KingdomOrganic compounds
Super ClassLipids and lipid-like molecules
ClassSteroids and steroid derivatives
Sub ClassCycloartanols and derivatives
Direct ParentCycloartanols and derivatives
Alternative ParentsNot Available
SubstituentsNot Available
Molecular FrameworkAliphatic homopolycyclic compounds
External DescriptorsNot Available
Ontology
Physiological effectNot Available
Disposition
Process
Role
Physical Properties
StateSolid
Experimental Molecular Properties
PropertyValueReference
Melting Point240 - 242 °CNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
Water Solubility0.00094 g/LALOGPS
logP4.52ALOGPS
logP5.51ChemAxon
logS-5.7ALOGPS
pKa (Strongest Acidic)4.63ChemAxon
pKa (Strongest Basic)-0.84ChemAxon
Physiological Charge-1ChemAxon
Hydrogen Acceptor Count4ChemAxon
Hydrogen Donor Count3ChemAxon
Polar Surface Area77.76 ŲChemAxon
Rotatable Bond Count5ChemAxon
Refractivity135.27 m³·mol⁻¹ChemAxon
Polarizability56.48 ųChemAxon
Number of Rings5ChemAxon
BioavailabilityYesChemAxon
Rule of FiveNoChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DarkChem[M+H]+211.83631661259
DarkChem[M-H]-203.77231661259
DeepCCS[M-2H]-247.38830932474
DeepCCS[M+Na]+222.82230932474
AllCCS[M+H]+218.832859911
AllCCS[M+H-H2O]+217.232859911
AllCCS[M+NH4]+220.232859911
AllCCS[M+Na]+220.632859911
AllCCS[M-H]-213.932859911
AllCCS[M+Na-2H]-216.432859911
AllCCS[M+HCOO]-219.232859911

Predicted Kovats Retention Indices

Underivatized

MetaboliteSMILESKovats RI ValueColumn TypeReference
(3beta,23xi)-3,23-Dihydroxycycloart-24-en-26-oic acidCC(CC(O)\C=C(\C)C(O)=O)C1CCC2(C)C3CCC4C5(CC35CCC12C)CCC(O)C4(C)C3472.1Standard polar33892256
(3beta,23xi)-3,23-Dihydroxycycloart-24-en-26-oic acidCC(CC(O)\C=C(\C)C(O)=O)C1CCC2(C)C3CCC4C5(CC35CCC12C)CCC(O)C4(C)C3598.3Standard non polar33892256
(3beta,23xi)-3,23-Dihydroxycycloart-24-en-26-oic acidCC(CC(O)\C=C(\C)C(O)=O)C1CCC2(C)C3CCC4C5(CC35CCC12C)CCC(O)C4(C)C4006.3Semi standard non polar33892256

Derivatized

Derivative Name / StructureSMILESKovats RI ValueColumn TypeReference
(3beta,23xi)-3,23-Dihydroxycycloart-24-en-26-oic acid,1TMS,isomer #1C/C(=C/C(CC(C)C1CCC2(C)C3CCC4C(C)(C)C(O)CCC45CC35CCC12C)O[Si](C)(C)C)C(=O)O3993.3Semi standard non polar33892256
(3beta,23xi)-3,23-Dihydroxycycloart-24-en-26-oic acid,1TMS,isomer #2C/C(=C/C(O)CC(C)C1CCC2(C)C3CCC4C(C)(C)C(O)CCC45CC35CCC12C)C(=O)O[Si](C)(C)C3924.8Semi standard non polar33892256
(3beta,23xi)-3,23-Dihydroxycycloart-24-en-26-oic acid,1TMS,isomer #3C/C(=C/C(O)CC(C)C1CCC2(C)C3CCC4C(C)(C)C(O[Si](C)(C)C)CCC45CC35CCC12C)C(=O)O4021.1Semi standard non polar33892256
(3beta,23xi)-3,23-Dihydroxycycloart-24-en-26-oic acid,2TMS,isomer #1C/C(=C/C(CC(C)C1CCC2(C)C3CCC4C(C)(C)C(O[Si](C)(C)C)CCC45CC35CCC12C)O[Si](C)(C)C)C(=O)O4010.5Semi standard non polar33892256
(3beta,23xi)-3,23-Dihydroxycycloart-24-en-26-oic acid,2TMS,isomer #2C/C(=C/C(CC(C)C1CCC2(C)C3CCC4C(C)(C)C(O)CCC45CC35CCC12C)O[Si](C)(C)C)C(=O)O[Si](C)(C)C3924.9Semi standard non polar33892256
(3beta,23xi)-3,23-Dihydroxycycloart-24-en-26-oic acid,2TMS,isomer #3C/C(=C/C(O)CC(C)C1CCC2(C)C3CCC4C(C)(C)C(O[Si](C)(C)C)CCC45CC35CCC12C)C(=O)O[Si](C)(C)C3879.7Semi standard non polar33892256
(3beta,23xi)-3,23-Dihydroxycycloart-24-en-26-oic acid,3TMS,isomer #1C/C(=C/C(CC(C)C1CCC2(C)C3CCC4C(C)(C)C(O[Si](C)(C)C)CCC45CC35CCC12C)O[Si](C)(C)C)C(=O)O[Si](C)(C)C3840.2Semi standard non polar33892256
(3beta,23xi)-3,23-Dihydroxycycloart-24-en-26-oic acid,1TBDMS,isomer #1C/C(=C/C(CC(C)C1CCC2(C)C3CCC4C(C)(C)C(O)CCC45CC35CCC12C)O[Si](C)(C)C(C)(C)C)C(=O)O4228.8Semi standard non polar33892256
(3beta,23xi)-3,23-Dihydroxycycloart-24-en-26-oic acid,1TBDMS,isomer #2C/C(=C/C(O)CC(C)C1CCC2(C)C3CCC4C(C)(C)C(O)CCC45CC35CCC12C)C(=O)O[Si](C)(C)C(C)(C)C4151.0Semi standard non polar33892256
(3beta,23xi)-3,23-Dihydroxycycloart-24-en-26-oic acid,1TBDMS,isomer #3C/C(=C/C(O)CC(C)C1CCC2(C)C3CCC4C(C)(C)C(O[Si](C)(C)C(C)(C)C)CCC45CC35CCC12C)C(=O)O4242.2Semi standard non polar33892256
(3beta,23xi)-3,23-Dihydroxycycloart-24-en-26-oic acid,2TBDMS,isomer #1C/C(=C/C(CC(C)C1CCC2(C)C3CCC4C(C)(C)C(O[Si](C)(C)C(C)(C)C)CCC45CC35CCC12C)O[Si](C)(C)C(C)(C)C)C(=O)O4455.3Semi standard non polar33892256
(3beta,23xi)-3,23-Dihydroxycycloart-24-en-26-oic acid,2TBDMS,isomer #2C/C(=C/C(CC(C)C1CCC2(C)C3CCC4C(C)(C)C(O)CCC45CC35CCC12C)O[Si](C)(C)C(C)(C)C)C(=O)O[Si](C)(C)C(C)(C)C4384.0Semi standard non polar33892256
(3beta,23xi)-3,23-Dihydroxycycloart-24-en-26-oic acid,2TBDMS,isomer #3C/C(=C/C(O)CC(C)C1CCC2(C)C3CCC4C(C)(C)C(O[Si](C)(C)C(C)(C)C)CCC45CC35CCC12C)C(=O)O[Si](C)(C)C(C)(C)C4332.5Semi standard non polar33892256
(3beta,23xi)-3,23-Dihydroxycycloart-24-en-26-oic acid,3TBDMS,isomer #1C/C(=C/C(CC(C)C1CCC2(C)C3CCC4C(C)(C)C(O[Si](C)(C)C(C)(C)C)CCC45CC35CCC12C)O[Si](C)(C)C(C)(C)C)C(=O)O[Si](C)(C)C(C)(C)C4502.3Semi standard non polar33892256
Spectra

GC-MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted GC-MSPredicted GC-MS Spectrum - (3beta,23xi)-3,23-Dihydroxycycloart-24-en-26-oic acid GC-MS (Non-derivatized) - 70eV, Positivesplash10-0a4l-2114900000-4e03c224d1357c7a68c32017-09-01Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - (3beta,23xi)-3,23-Dihydroxycycloart-24-en-26-oic acid GC-MS (3 TMS) - 70eV, Positivesplash10-00di-1001019000-9b8c445007e279ce78992017-10-06Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - (3beta,23xi)-3,23-Dihydroxycycloart-24-en-26-oic acid GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (3beta,23xi)-3,23-Dihydroxycycloart-24-en-26-oic acid 10V, Positive-QTOFsplash10-0a4i-0000900000-990976e685fa1d8c3a6f2016-08-01Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (3beta,23xi)-3,23-Dihydroxycycloart-24-en-26-oic acid 20V, Positive-QTOFsplash10-0aei-4009800000-954200f3fef2c884b2ad2016-08-01Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (3beta,23xi)-3,23-Dihydroxycycloart-24-en-26-oic acid 40V, Positive-QTOFsplash10-0a4i-2009600000-45f0ad35514ed8f80fe02016-08-01Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (3beta,23xi)-3,23-Dihydroxycycloart-24-en-26-oic acid 10V, Negative-QTOFsplash10-00di-0000900000-ccf848996ea6b0f5514e2016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (3beta,23xi)-3,23-Dihydroxycycloart-24-en-26-oic acid 20V, Negative-QTOFsplash10-0kmr-2002900000-f97876336f2b82ee33612016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (3beta,23xi)-3,23-Dihydroxycycloart-24-en-26-oic acid 40V, Negative-QTOFsplash10-0a4u-9005400000-95a992411c71eb5ded852016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (3beta,23xi)-3,23-Dihydroxycycloart-24-en-26-oic acid 10V, Positive-QTOFsplash10-00rl-1209400000-68ddb6f576ea42eb3e532021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (3beta,23xi)-3,23-Dihydroxycycloart-24-en-26-oic acid 20V, Positive-QTOFsplash10-02tl-4429500000-a9d96616e1f4b18ace2f2021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (3beta,23xi)-3,23-Dihydroxycycloart-24-en-26-oic acid 40V, Positive-QTOFsplash10-0006-9576200000-668dbf8b094c5a3e90b72021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (3beta,23xi)-3,23-Dihydroxycycloart-24-en-26-oic acid 10V, Negative-QTOFsplash10-00di-0000900000-cb03f30cfea1cc2c304a2021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (3beta,23xi)-3,23-Dihydroxycycloart-24-en-26-oic acid 20V, Negative-QTOFsplash10-0a6r-0001900000-1ab0562d5d3130960d0d2021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (3beta,23xi)-3,23-Dihydroxycycloart-24-en-26-oic acid 40V, Negative-QTOFsplash10-0cdi-4202900000-005fd36f128f862ba2492021-09-22Wishart LabView Spectrum
Biological Properties
Cellular Locations
  • Extracellular
Biospecimen LocationsNot Available
Tissue LocationsNot Available
Pathways
Normal Concentrations
Not Available
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDFDB014889
KNApSAcK IDNot Available
Chemspider IDNot Available
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound131751582
PDB IDNot Available
ChEBI IDNot Available
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDNot Available
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General References
  1. Simons K, Toomre D: Lipid rafts and signal transduction. Nat Rev Mol Cell Biol. 2000 Oct;1(1):31-9. [PubMed:11413487 ]
  2. Watson AD: Thematic review series: systems biology approaches to metabolic and cardiovascular disorders. Lipidomics: a global approach to lipid analysis in biological systems. J Lipid Res. 2006 Oct;47(10):2101-11. Epub 2006 Aug 10. [PubMed:16902246 ]
  3. Sethi JK, Vidal-Puig AJ: Thematic review series: adipocyte biology. Adipose tissue function and plasticity orchestrate nutritional adaptation. J Lipid Res. 2007 Jun;48(6):1253-62. Epub 2007 Mar 20. [PubMed:17374880 ]
  4. Lingwood D, Simons K: Lipid rafts as a membrane-organizing principle. Science. 2010 Jan 1;327(5961):46-50. doi: 10.1126/science.1174621. [PubMed:20044567 ]
  5. (). Yannai, Shmuel. (2004) Dictionary of food compounds with CD-ROM: Additives, flavors, and ingredients. Boca Raton: Chapman & Hall/CRC.. .
  6. Gunstone, Frank D., John L. Harwood, and Albert J. Dijkstra (2007). The lipid handbook with CD-ROM. CRC Press.