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Record Information
Version5.0
StatusExpected but not Quantified
Creation Date2012-09-11 19:31:52 UTC
Update Date2022-03-07 02:54:11 UTC
HMDB IDHMDB0034639
Secondary Accession Numbers
  • HMDB34639
Metabolite Identification
Common NameEsculentic acid (Phytolacca)
DescriptionEsculentic acid (Phytolacca) belongs to the class of organic compounds known as triterpenoids. These are terpene molecules containing six isoprene units. Based on a literature review a significant number of articles have been published on Esculentic acid (Phytolacca).
Structure
Data?1563862595
Synonyms
ValueSource
Esculentate (phytolacca)Generator
10-Hydroxy-9-(hydroxymethyl)-2,6a,6b,9,12a-pentamethyl-1,2,3,4,4a,5,6,6a,6b,7,8,8a,9,10,11,12,12a,12b,13,14b-icosahydropicene-2,4a-dicarboxylateHMDB
Chemical FormulaC30H46O6
Average Molecular Weight502.6826
Monoisotopic Molecular Weight502.329439204
IUPAC Name10-hydroxy-9-(hydroxymethyl)-2,6a,6b,9,12a-pentamethyl-1,2,3,4,4a,5,6,6a,6b,7,8,8a,9,10,11,12,12a,12b,13,14b-icosahydropicene-2,4a-dicarboxylic acid
Traditional Name10-hydroxy-9-(hydroxymethyl)-2,6a,6b,9,12a-pentamethyl-1,3,4,5,6,7,8,8a,10,11,12,12b,13,14b-tetradecahydropicene-2,4a-dicarboxylic acid
CAS Registry Number56283-68-2
SMILES
CC1(CO)C(O)CCC2(C)C1CCC1(C)C2CC=C2C3CC(C)(CCC3(CCC12C)C(O)=O)C(O)=O
InChI Identifier
InChI=1S/C30H46O6/c1-25(23(33)34)12-14-30(24(35)36)15-13-28(4)18(19(30)16-25)6-7-21-26(2)10-9-22(32)27(3,17-31)20(26)8-11-29(21,28)5/h6,19-22,31-32H,7-17H2,1-5H3,(H,33,34)(H,35,36)
InChI KeyCLXOLTFMHAXJST-UHFFFAOYSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as triterpenoids. These are terpene molecules containing six isoprene units.
KingdomOrganic compounds
Super ClassLipids and lipid-like molecules
ClassPrenol lipids
Sub ClassTriterpenoids
Direct ParentTriterpenoids
Alternative Parents
Substituents
  • Triterpenoid
  • Steroid
  • Dicarboxylic acid or derivatives
  • Cyclic alcohol
  • Secondary alcohol
  • Carboxylic acid
  • Carboxylic acid derivative
  • Organic oxygen compound
  • Organic oxide
  • Hydrocarbon derivative
  • Primary alcohol
  • Organooxygen compound
  • Carbonyl group
  • Alcohol
  • Aliphatic homopolycyclic compound
Molecular FrameworkAliphatic homopolycyclic compounds
External DescriptorsNot Available
Ontology
Physiological effectNot Available
Disposition
Process
Role
Physical Properties
StateSolid
Experimental Molecular Properties
PropertyValueReference
Melting Point360 °CNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
Water Solubility0.0055 g/LALOGPS
logP3.54ALOGPS
logP4.51ChemAxon
logS-5ALOGPS
pKa (Strongest Acidic)4.12ChemAxon
pKa (Strongest Basic)-2.8ChemAxon
Physiological Charge-2ChemAxon
Hydrogen Acceptor Count6ChemAxon
Hydrogen Donor Count4ChemAxon
Polar Surface Area115.06 ŲChemAxon
Rotatable Bond Count3ChemAxon
Refractivity137.12 m³·mol⁻¹ChemAxon
Polarizability56.84 ųChemAxon
Number of Rings5ChemAxon
BioavailabilityYesChemAxon
Rule of FiveNoChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DarkChem[M+H]+214.9431661259
DarkChem[M-H]-205.631661259
DeepCCS[M-2H]-240.74930932474
DeepCCS[M+Na]+216.31530932474
AllCCS[M+H]+218.632859911
AllCCS[M+H-H2O]+217.232859911
AllCCS[M+NH4]+219.932859911
AllCCS[M+Na]+220.332859911
AllCCS[M-H]-214.232859911
AllCCS[M+Na-2H]-216.532859911
AllCCS[M+HCOO]-219.232859911

Predicted Kovats Retention Indices

Underivatized

MetaboliteSMILESKovats RI ValueColumn TypeReference
Esculentic acid (Phytolacca)CC1(CO)C(O)CCC2(C)C1CCC1(C)C2CC=C2C3CC(C)(CCC3(CCC12C)C(O)=O)C(O)=O3326.8Standard polar33892256
Esculentic acid (Phytolacca)CC1(CO)C(O)CCC2(C)C1CCC1(C)C2CC=C2C3CC(C)(CCC3(CCC12C)C(O)=O)C(O)=O3720.9Standard non polar33892256
Esculentic acid (Phytolacca)CC1(CO)C(O)CCC2(C)C1CCC1(C)C2CC=C2C3CC(C)(CCC3(CCC12C)C(O)=O)C(O)=O4323.1Semi standard non polar33892256

Derivatized

Derivative Name / StructureSMILESKovats RI ValueColumn TypeReference
Esculentic acid (Phytolacca),1TMS,isomer #1CC1(C(=O)O)CCC2(C(=O)O)CCC3(C)C(=CCC4C5(C)CCC(O)C(C)(CO[Si](C)(C)C)C5CCC43C)C2C14299.1Semi standard non polar33892256
Esculentic acid (Phytolacca),1TMS,isomer #2CC1(C(=O)O)CCC2(C(=O)O)CCC3(C)C(=CCC4C5(C)CCC(O[Si](C)(C)C)C(C)(CO)C5CCC43C)C2C14310.8Semi standard non polar33892256
Esculentic acid (Phytolacca),1TMS,isomer #3CC1(C(=O)O)CCC2(C(=O)O[Si](C)(C)C)CCC3(C)C(=CCC4C5(C)CCC(O)C(C)(CO)C5CCC43C)C2C14200.5Semi standard non polar33892256
Esculentic acid (Phytolacca),1TMS,isomer #4CC1(C(=O)O[Si](C)(C)C)CCC2(C(=O)O)CCC3(C)C(=CCC4C5(C)CCC(O)C(C)(CO)C5CCC43C)C2C14235.0Semi standard non polar33892256
Esculentic acid (Phytolacca),2TMS,isomer #1CC1(C(=O)O[Si](C)(C)C)CCC2(C(=O)O)CCC3(C)C(=CCC4C5(C)CCC(O)C(C)(CO[Si](C)(C)C)C5CCC43C)C2C14170.2Semi standard non polar33892256
Esculentic acid (Phytolacca),2TMS,isomer #2CC1(C(=O)O)CCC2(C(=O)O[Si](C)(C)C)CCC3(C)C(=CCC4C5(C)CCC(O)C(C)(CO[Si](C)(C)C)C5CCC43C)C2C14135.9Semi standard non polar33892256
Esculentic acid (Phytolacca),2TMS,isomer #3CC1(C(=O)O)CCC2(C(=O)O)CCC3(C)C(=CCC4C5(C)CCC(O[Si](C)(C)C)C(C)(CO[Si](C)(C)C)C5CCC43C)C2C14280.4Semi standard non polar33892256
Esculentic acid (Phytolacca),2TMS,isomer #4CC1(C(=O)O[Si](C)(C)C)CCC2(C(=O)O)CCC3(C)C(=CCC4C5(C)CCC(O[Si](C)(C)C)C(C)(CO)C5CCC43C)C2C14194.9Semi standard non polar33892256
Esculentic acid (Phytolacca),2TMS,isomer #5CC1(C(=O)O)CCC2(C(=O)O[Si](C)(C)C)CCC3(C)C(=CCC4C5(C)CCC(O[Si](C)(C)C)C(C)(CO)C5CCC43C)C2C14156.8Semi standard non polar33892256
Esculentic acid (Phytolacca),2TMS,isomer #6CC1(C(=O)O[Si](C)(C)C)CCC2(C(=O)O[Si](C)(C)C)CCC3(C)C(=CCC4C5(C)CCC(O)C(C)(CO)C5CCC43C)C2C14106.0Semi standard non polar33892256
Esculentic acid (Phytolacca),3TMS,isomer #1CC1(C(=O)O[Si](C)(C)C)CCC2(C(=O)O[Si](C)(C)C)CCC3(C)C(=CCC4C5(C)CCC(O)C(C)(CO[Si](C)(C)C)C5CCC43C)C2C14006.4Semi standard non polar33892256
Esculentic acid (Phytolacca),3TMS,isomer #2CC1(C(=O)O[Si](C)(C)C)CCC2(C(=O)O)CCC3(C)C(=CCC4C5(C)CCC(O[Si](C)(C)C)C(C)(CO[Si](C)(C)C)C5CCC43C)C2C14115.4Semi standard non polar33892256
Esculentic acid (Phytolacca),3TMS,isomer #3CC1(C(=O)O)CCC2(C(=O)O[Si](C)(C)C)CCC3(C)C(=CCC4C5(C)CCC(O[Si](C)(C)C)C(C)(CO[Si](C)(C)C)C5CCC43C)C2C14086.7Semi standard non polar33892256
Esculentic acid (Phytolacca),3TMS,isomer #4CC1(C(=O)O[Si](C)(C)C)CCC2(C(=O)O[Si](C)(C)C)CCC3(C)C(=CCC4C5(C)CCC(O[Si](C)(C)C)C(C)(CO)C5CCC43C)C2C14022.2Semi standard non polar33892256
Esculentic acid (Phytolacca),4TMS,isomer #1CC1(C(=O)O[Si](C)(C)C)CCC2(C(=O)O[Si](C)(C)C)CCC3(C)C(=CCC4C5(C)CCC(O[Si](C)(C)C)C(C)(CO[Si](C)(C)C)C5CCC43C)C2C13947.8Semi standard non polar33892256
Esculentic acid (Phytolacca),1TBDMS,isomer #1CC1(C(=O)O)CCC2(C(=O)O)CCC3(C)C(=CCC4C5(C)CCC(O)C(C)(CO[Si](C)(C)C(C)(C)C)C5CCC43C)C2C14520.7Semi standard non polar33892256
Esculentic acid (Phytolacca),1TBDMS,isomer #2CC1(C(=O)O)CCC2(C(=O)O)CCC3(C)C(=CCC4C5(C)CCC(O[Si](C)(C)C(C)(C)C)C(C)(CO)C5CCC43C)C2C14516.1Semi standard non polar33892256
Esculentic acid (Phytolacca),1TBDMS,isomer #3CC1(C(=O)O)CCC2(C(=O)O[Si](C)(C)C(C)(C)C)CCC3(C)C(=CCC4C5(C)CCC(O)C(C)(CO)C5CCC43C)C2C14443.5Semi standard non polar33892256
Esculentic acid (Phytolacca),1TBDMS,isomer #4CC1(C(=O)O[Si](C)(C)C(C)(C)C)CCC2(C(=O)O)CCC3(C)C(=CCC4C5(C)CCC(O)C(C)(CO)C5CCC43C)C2C14470.4Semi standard non polar33892256
Esculentic acid (Phytolacca),2TBDMS,isomer #1CC1(C(=O)O[Si](C)(C)C(C)(C)C)CCC2(C(=O)O)CCC3(C)C(=CCC4C5(C)CCC(O)C(C)(CO[Si](C)(C)C(C)(C)C)C5CCC43C)C2C14597.6Semi standard non polar33892256
Esculentic acid (Phytolacca),2TBDMS,isomer #2CC1(C(=O)O)CCC2(C(=O)O[Si](C)(C)C(C)(C)C)CCC3(C)C(=CCC4C5(C)CCC(O)C(C)(CO[Si](C)(C)C(C)(C)C)C5CCC43C)C2C14571.8Semi standard non polar33892256
Esculentic acid (Phytolacca),2TBDMS,isomer #3CC1(C(=O)O)CCC2(C(=O)O)CCC3(C)C(=CCC4C5(C)CCC(O[Si](C)(C)C(C)(C)C)C(C)(CO[Si](C)(C)C(C)(C)C)C5CCC43C)C2C14707.3Semi standard non polar33892256
Esculentic acid (Phytolacca),2TBDMS,isomer #4CC1(C(=O)O[Si](C)(C)C(C)(C)C)CCC2(C(=O)O)CCC3(C)C(=CCC4C5(C)CCC(O[Si](C)(C)C(C)(C)C)C(C)(CO)C5CCC43C)C2C14618.8Semi standard non polar33892256
Esculentic acid (Phytolacca),2TBDMS,isomer #5CC1(C(=O)O)CCC2(C(=O)O[Si](C)(C)C(C)(C)C)CCC3(C)C(=CCC4C5(C)CCC(O[Si](C)(C)C(C)(C)C)C(C)(CO)C5CCC43C)C2C14588.1Semi standard non polar33892256
Esculentic acid (Phytolacca),2TBDMS,isomer #6CC1(C(=O)O[Si](C)(C)C(C)(C)C)CCC2(C(=O)O[Si](C)(C)C(C)(C)C)CCC3(C)C(=CCC4C5(C)CCC(O)C(C)(CO)C5CCC43C)C2C14545.2Semi standard non polar33892256
Esculentic acid (Phytolacca),3TBDMS,isomer #1CC1(C(=O)O[Si](C)(C)C(C)(C)C)CCC2(C(=O)O[Si](C)(C)C(C)(C)C)CCC3(C)C(=CCC4C5(C)CCC(O)C(C)(CO[Si](C)(C)C(C)(C)C)C5CCC43C)C2C14624.8Semi standard non polar33892256
Esculentic acid (Phytolacca),3TBDMS,isomer #2CC1(C(=O)O[Si](C)(C)C(C)(C)C)CCC2(C(=O)O)CCC3(C)C(=CCC4C5(C)CCC(O[Si](C)(C)C(C)(C)C)C(C)(CO[Si](C)(C)C(C)(C)C)C5CCC43C)C2C14745.1Semi standard non polar33892256
Esculentic acid (Phytolacca),3TBDMS,isomer #3CC1(C(=O)O)CCC2(C(=O)O[Si](C)(C)C(C)(C)C)CCC3(C)C(=CCC4C5(C)CCC(O[Si](C)(C)C(C)(C)C)C(C)(CO[Si](C)(C)C(C)(C)C)C5CCC43C)C2C14707.9Semi standard non polar33892256
Esculentic acid (Phytolacca),3TBDMS,isomer #4CC1(C(=O)O[Si](C)(C)C(C)(C)C)CCC2(C(=O)O[Si](C)(C)C(C)(C)C)CCC3(C)C(=CCC4C5(C)CCC(O[Si](C)(C)C(C)(C)C)C(C)(CO)C5CCC43C)C2C14647.3Semi standard non polar33892256
Spectra

GC-MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted GC-MSPredicted GC-MS Spectrum - Esculentic acid (Phytolacca) GC-MS (Non-derivatized) - 70eV, Positivesplash10-0079-0001900000-01d8d01377d82c1ca3182017-09-01Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Esculentic acid (Phytolacca) GC-MS (2 TMS) - 70eV, Positivesplash10-0089-1101419000-355364e538177b65036e2017-10-06Wishart LabView Spectrum

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Esculentic acid (Phytolacca) 10V, Positive-QTOFsplash10-000i-0000910000-454e89877cdd6d4ef1b32016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Esculentic acid (Phytolacca) 20V, Positive-QTOFsplash10-00kr-0000900000-17742cb323ac49f6a5952016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Esculentic acid (Phytolacca) 40V, Positive-QTOFsplash10-01pa-1023900000-b9b9b09773addb6405ba2016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Esculentic acid (Phytolacca) 10V, Negative-QTOFsplash10-0zfr-0000950000-4cd5b635b778521a67e22016-08-04Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Esculentic acid (Phytolacca) 20V, Negative-QTOFsplash10-0kbr-0000900000-425c96fdde9aef32d3312016-08-04Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Esculentic acid (Phytolacca) 40V, Negative-QTOFsplash10-004i-0000900000-e7bcd6b06f1d1df3f7302016-08-04Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Esculentic acid (Phytolacca) 10V, Positive-QTOFsplash10-0udi-0000890000-b6a74f41ffb20a990a8f2021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Esculentic acid (Phytolacca) 20V, Positive-QTOFsplash10-000i-0101910000-2c257e3bf5739061f8f02021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Esculentic acid (Phytolacca) 40V, Positive-QTOFsplash10-00kb-2629700000-87a35cf9e76cf0ce03cc2021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Esculentic acid (Phytolacca) 10V, Negative-QTOFsplash10-0udi-0000190000-5abc051388395016ce1e2021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Esculentic acid (Phytolacca) 20V, Negative-QTOFsplash10-0udi-0000950000-455b931984c283ca31fa2021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Esculentic acid (Phytolacca) 40V, Negative-QTOFsplash10-0udi-0000900000-fc7f26996b47b370ccde2021-09-22Wishart LabView Spectrum
Biological Properties
Cellular Locations
  • Extracellular
  • Membrane
Biospecimen LocationsNot Available
Tissue LocationsNot Available
Pathways
Normal Concentrations
Not Available
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDFDB013162
KNApSAcK IDNot Available
Chemspider ID35013754
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound73810253
PDB IDNot Available
ChEBI IDNot Available
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDNot Available
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General References
  1. Simons K, Toomre D: Lipid rafts and signal transduction. Nat Rev Mol Cell Biol. 2000 Oct;1(1):31-9. [PubMed:11413487 ]
  2. Watson AD: Thematic review series: systems biology approaches to metabolic and cardiovascular disorders. Lipidomics: a global approach to lipid analysis in biological systems. J Lipid Res. 2006 Oct;47(10):2101-11. Epub 2006 Aug 10. [PubMed:16902246 ]
  3. Sethi JK, Vidal-Puig AJ: Thematic review series: adipocyte biology. Adipose tissue function and plasticity orchestrate nutritional adaptation. J Lipid Res. 2007 Jun;48(6):1253-62. Epub 2007 Mar 20. [PubMed:17374880 ]
  4. Lingwood D, Simons K: Lipid rafts as a membrane-organizing principle. Science. 2010 Jan 1;327(5961):46-50. doi: 10.1126/science.1174621. [PubMed:20044567 ]
  5. (). Yannai, Shmuel. (2004) Dictionary of food compounds with CD-ROM: Additives, flavors, and ingredients. Boca Raton: Chapman & Hall/CRC.. .
  6. Gunstone, Frank D., John L. Harwood, and Albert J. Dijkstra (2007). The lipid handbook with CD-ROM. CRC Press.