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Record Information

Version

5.0

Status

Expected but not Quantified

Creation Date

2012-09-11 19:32:12 UTC

Update Date

2022-03-07 02:54:11 UTC

HMDB ID

HMDB0034643

Secondary Accession Numbers

HMDB34643

Metabolite Identification

Common Name

Longispinogenin

Description

Longispinogenin belongs to the class of organic compounds known as triterpenoids. These are terpene molecules containing six isoprene units. Based on a literature review a small amount of articles have been published on Longispinogenin.

Structure

MOL 3D MOL SDF 3D SDF PDB 3D PDB SMILES InChI


  Mrv0541 02241219202D          

 33 37  0  0  0  0            999 V2000
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   -0.7143   -2.0623    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
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 28 29  1  0  0  0  0
 30 31  1  0  0  0  0
 31 32  1  0  0  0  0
M  END

HMDB0034643
     RDKit          3D
Longispinogenin
 83 87  0  0  0  0  0  0  0  0999 V2000
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M  END


  Mrv0541 02241219202D          

 33 37  0  0  0  0            999 V2000
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  7  8  2  0  0  0  0
  7 23  1  0  0  0  0
  8  9  1  0  0  0  0
  9 10  1  0  0  0  0
 10 11  1  0  0  0  0
 11 12  1  0  0  0  0
 11 18  1  0  0  0  0
 13 14  1  0  0  0  0
 13 31  1  0  0  0  0
 14 15  1  0  0  0  0
 15 16  1  0  0  0  0
 15 25  1  0  0  0  0
 16 17  1  0  0  0  0
 18 19  1  0  0  0  0
 19 20  1  0  0  0  0
 20 21  1  0  0  0  0
 20 28  1  0  0  0  0
 22 23  1  0  0  0  0
 23 24  1  0  0  0  0
 24 25  1  0  0  0  0
 25 26  1  0  0  0  0
 27 28  1  0  0  0  0
 28 29  1  0  0  0  0
 30 31  1  0  0  0  0
 31 32  1  0  0  0  0
M  END
> <DATABASE_ID>
HMDB0034643

> <DATABASE_NAME>
hmdb

> <SMILES>
CC1(C)CCC2(CO)C(O)CC3(C)C(=CCC4C5(C)CCC(O)C(C)(C)C5CCC34C)C2C1

> <INCHI_IDENTIFIER>
InChI=1S/C30H50O3/c1-25(2)14-15-30(18-31)20(16-25)19-8-9-22-27(5)12-11-23(32)26(3,4)21(27)10-13-28(22,6)29(19,7)17-24(30)33/h8,20-24,31-33H,9-18H2,1-7H3

> <INCHI_KEY>
YHGVYECWZWIVJC-UHFFFAOYSA-N

> <FORMULA>
C30H50O3

> <MOLECULAR_WEIGHT>
458.7162

> <EXACT_MASS>
458.375995466

> <JCHEM_ACCEPTOR_COUNT>
3

> <JCHEM_AVERAGE_POLARIZABILITY>
55.87040775095112

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
3

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
0

> <JCHEM_IUPAC>
8a-(hydroxymethyl)-4,4,6a,6b,11,11,14b-heptamethyl-1,2,3,4,4a,5,6,6a,6b,7,8,8a,9,10,11,12,12a,14,14a,14b-icosahydropicene-3,8-diol

> <ALOGPS_LOGP>
5.73

> <JCHEM_LOGP>
4.891558610666667

> <ALOGPS_LOGS>
-5.06

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
5

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA>
15.244504529037094

> <JCHEM_PKA_STRONGEST_ACIDIC>
14.44740211028219

> <JCHEM_PKA_STRONGEST_BASIC>
-0.8351218782716149

> <JCHEM_POLAR_SURFACE_AREA>
60.69

> <JCHEM_REFRACTIVITY>
135.19749999999996

> <JCHEM_ROTATABLE_BOND_COUNT>
1

> <JCHEM_RULE_OF_FIVE>
1

> <ALOGPS_SOLUBILITY>
4.00e-03 g/l

> <JCHEM_TRADITIONAL_IUPAC>
8a-(hydroxymethyl)-4,4,6a,6b,11,11,14b-heptamethyl-1,2,3,4a,5,6,7,8,9,10,12,12a,14,14a-tetradecahydropicene-3,8-diol

> <JCHEM_VEBER_RULE>
0

$$$$

HMDB0034643
     RDKit          3D
Longispinogenin
 83 87  0  0  0  0  0  0  0  0999 V2000
   -3.7978   -2.8682    1.1618 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.9635   -1.3741    1.3501 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.4412   -1.1396    2.7565 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.0438   -0.9087    0.4030 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.4339   -0.8788   -0.9696 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.4082    0.2640   -1.0903 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.1821    1.4176   -1.6571 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.2470    1.7682   -0.7917 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3375   -0.2815   -1.9832 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.9429   -0.6593   -3.1851 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2851    0.7057   -2.3060 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6262    1.3675   -1.0905 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8074    2.8676   -1.3406 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3966    1.1155    0.1421 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8403    1.4156    1.3030 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.5624    1.9918    1.2211 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.2880    0.9821    0.3990 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.7638    0.8802    0.6443 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.4487    2.2291    0.6118 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.9626    0.3517    2.0499 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.7289   -1.1159    2.1988 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.8057   -1.8406    1.4450 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.8475   -2.2444    2.2805 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.3973   -1.0391    0.3325 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.6832   -0.3468    0.6616 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.7453   -2.0669   -0.7620 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.3814   -0.0904   -0.3304 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.4096   -0.9676   -1.0237 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.1720   -0.3613   -1.5778 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.8390    1.0048   -1.0095 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.5911    1.9606   -1.9139 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7649    0.5404    0.2378 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.6349   -0.7291    1.0649 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.8109   -3.4094    2.1433 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.5856   -3.2951    0.4971 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8238   -3.1150    0.6775 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.4436   -1.6049    2.8446 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.5544   -0.0606    2.9928 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.7622   -1.6645    3.4621 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.8184   -1.7039    0.3909 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.5305    0.0120    0.7175 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.1899   -0.7695   -1.7720 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.9478   -1.8571   -1.1337 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.6055    2.3577   -1.7586 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.6949    1.1490   -2.6130 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.9575    2.2470   -1.2587 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0040   -1.2249   -1.5055 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4690   -1.4568   -3.5769 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.8018    1.4762   -2.9603 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5715    0.2467   -2.9960 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4350    3.3646   -0.5736 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3860    3.0558   -2.2960 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.0932    3.4425   -1.4580 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2887    1.2948    2.2792 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.9497    2.1184    2.2517 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.4701    2.9930    0.8202 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.9148   -0.0326    0.7881 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.7199    3.0702    0.8123 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.0430    2.4057   -0.2895 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.1653    2.3552    1.4809 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.0459    0.5308    2.2918 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.4106    0.8683    2.8282 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.7131   -1.4558    2.0078 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.9155   -1.3361    3.2925 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.3350   -2.7938    1.0640 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.7912   -3.1798    2.5580 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.0292   -0.6609    1.6907 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.5483   -0.6755    0.0090 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.6627    0.7472    0.5377 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.0351   -2.8910   -0.7958 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.0107   -1.5931   -1.7049 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.7083   -2.5276   -0.3836 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.0495    0.5110   -1.0079 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.9865   -1.5007   -1.8391 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.1707   -1.8170   -0.3137 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.3639   -1.1054   -1.4457 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.3281   -0.2816   -2.6873 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.0024    2.8375   -1.4437 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.8953    2.1637   -2.7854 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.4428    1.4658   -2.4578 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.4517    1.2085    0.8008 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9379   -1.4038    0.5450 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2034   -0.4552    2.0402 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  1  0
  2  4  1  0
  4  5  1  0
  5  6  1  0
  6  7  1  0
  7  8  1  0
  6  9  1  0
  9 10  1  0
  9 11  1  0
 11 12  1  0
 12 13  1  0
 12 14  1  0
 14 15  2  0
 15 16  1  0
 16 17  1  0
 17 18  1  0
 18 19  1  0
 18 20  1  0
 20 21  1  0
 21 22  1  0
 22 23  1  0
 22 24  1  0
 24 25  1  0
 24 26  1  0
 24 27  1  0
 27 28  1  0
 28 29  1  0
 29 30  1  0
 30 31  1  0
 14 32  1  0
 32 33  1  0
 33  2  1  0
 32  6  1  0
 30 12  1  0
 30 17  1  0
 27 18  1  0
  1 34  1  0
  1 35  1  0
  1 36  1  0
  3 37  1  0
  3 38  1  0
  3 39  1  0
  4 40  1  0
  4 41  1  0
  5 42  1  0
  5 43  1  0
  7 44  1  0
  7 45  1  0
  8 46  1  0
  9 47  1  0
 10 48  1  0
 11 49  1  0
 11 50  1  0
 13 51  1  0
 13 52  1  0
 13 53  1  0
 15 54  1  0
 16 55  1  0
 16 56  1  0
 17 57  1  0
 19 58  1  0
 19 59  1  0
 19 60  1  0
 20 61  1  0
 20 62  1  0
 21 63  1  0
 21 64  1  0
 22 65  1  0
 23 66  1  0
 25 67  1  0
 25 68  1  0
 25 69  1  0
 26 70  1  0
 26 71  1  0
 26 72  1  0
 27 73  1  0
 28 74  1  0
 28 75  1  0
 29 76  1  0
 29 77  1  0
 31 78  1  0
 31 79  1  0
 31 80  1  0
 32 81  1  0
 33 82  1  0
 33 83  1  0
M  END

HEADER    PROTEIN                                 24-FEB-12   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   24-FEB-12         0                                  
HETATM    1  C   UNK     0      -2.668  -3.080   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0      -1.333  -3.850   0.000  0.00  0.00           C+0
HETATM    3  C   UNK     0      -0.001  -3.080   0.000  0.00  0.00           C+0
HETATM    4  C   UNK     0      -0.001  -1.540   0.000  0.00  0.00           C+0
HETATM    5  C   UNK     0       2.668   3.080   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0       2.668   1.540   0.000  0.00  0.00           C+0
HETATM    7  C   UNK     0       1.333   0.770   0.000  0.00  0.00           C+0
HETATM    8  C   UNK     0      -0.001   1.540   0.000  0.00  0.00           C+0
HETATM    9  C   UNK     0      -1.333   0.770   0.000  0.00  0.00           C+0
HETATM   10  C   UNK     0      -1.333  -0.770   0.000  0.00  0.00           C+0
HETATM   11  C   UNK     0      -2.668  -1.540   0.000  0.00  0.00           C+0
HETATM   12  C   UNK     0      -2.668   0.000   0.000  0.00  0.00           C+0
HETATM   13  C   UNK     0       5.335   3.080   0.000  0.00  0.00           C+0
HETATM   14  C   UNK     0       5.335   1.540   0.000  0.00  0.00           C+0
HETATM   15  C   UNK     0       4.000   0.770   0.000  0.00  0.00           C+0
HETATM   16  C   UNK     0       5.335   0.000   0.000  0.00  0.00           C+0
HETATM   17  O   UNK     0       6.669   0.770   0.000  0.00  0.00           O+0
HETATM   18  C   UNK     0      -4.000  -0.770   0.000  0.00  0.00           C+0
HETATM   19  C   UNK     0      -5.335  -1.540   0.000  0.00  0.00           C+0
HETATM   20  C   UNK     0      -5.335  -3.080   0.000  0.00  0.00           C+0
HETATM   21  O   UNK     0      -6.669  -3.850   0.000  0.00  0.00           O+0
HETATM   22  C   UNK     0       1.333  -2.310   0.000  0.00  0.00           C+0
HETATM   23  C   UNK     0       1.333  -0.770   0.000  0.00  0.00           C+0
HETATM   24  C   UNK     0       2.668  -1.540   0.000  0.00  0.00           C+0
HETATM   25  C   UNK     0       4.000  -0.770   0.000  0.00  0.00           C+0
HETATM   26  O   UNK     0       5.335  -1.540   0.000  0.00  0.00           O+0
HETATM   27  C   UNK     0      -4.991  -5.030   0.000  0.00  0.00           C+0
HETATM   28  C   UNK     0      -4.000  -3.850   0.000  0.00  0.00           C+0
HETATM   29  C   UNK     0      -3.012  -5.030   0.000  0.00  0.00           C+0
HETATM   30  C   UNK     0       4.990   5.030   0.000  0.00  0.00           C+0
HETATM   31  C   UNK     0       4.000   3.850   0.000  0.00  0.00           C+0
HETATM   32  C   UNK     0       3.012   5.030   0.000  0.00  0.00           C+0
HETATM   33  C   UNK     0       0.769  -2.874   0.000  0.00  0.00           C+0
CONECT    1    2   11   28                                                  
CONECT    2    1    3                                                       
CONECT    3    2    4                                                       
CONECT    4    3   10   23   33                                             
CONECT    5    6   31                                                       
CONECT    6    5    7   15                                                  
CONECT    7    6    8   23                                                  
CONECT    8    7    9                                                       
CONECT    9    8   10                                                       
CONECT   10    4    9   11                                                  
CONECT   11    1   10   12   18                                             
CONECT   12   11                                                            
CONECT   13   14   31                                                       
CONECT   14   13   15                                                       
CONECT   15    6   14   16   25                                             
CONECT   16   15   17                                                       
CONECT   17   16                                                            
CONECT   18   11   19                                                       
CONECT   19   18   20                                                       
CONECT   20   19   21   28                                                  
CONECT   21   20                                                            
CONECT   22   23                                                            
CONECT   23    4    7   22   24                                             
CONECT   24   23   25                                                       
CONECT   25   15   24   26                                                  
CONECT   26   25                                                            
CONECT   27   28                                                            
CONECT   28    1   20   27   29                                             
CONECT   29   28                                                            
CONECT   30   31                                                            
CONECT   31    5   13   30   32                                             
CONECT   32   31                                                            
CONECT   33    4                                                            
MASTER        0    0    0    0    0    0    0    0   33    0   74    0
END

COMPND    HMDB0034643
HETATM    1  C1  UNL     1      -3.798  -2.868   1.162  1.00  0.00           C  
HETATM    2  C2  UNL     1      -3.963  -1.374   1.350  1.00  0.00           C  
HETATM    3  C3  UNL     1      -4.441  -1.140   2.757  1.00  0.00           C  
HETATM    4  C4  UNL     1      -5.044  -0.909   0.403  1.00  0.00           C  
HETATM    5  C5  UNL     1      -4.434  -0.879  -0.970  1.00  0.00           C  
HETATM    6  C6  UNL     1      -3.408   0.264  -1.090  1.00  0.00           C  
HETATM    7  C7  UNL     1      -4.182   1.418  -1.657  1.00  0.00           C  
HETATM    8  O1  UNL     1      -5.247   1.768  -0.792  1.00  0.00           O  
HETATM    9  C8  UNL     1      -2.338  -0.282  -1.983  1.00  0.00           C  
HETATM   10  O2  UNL     1      -2.943  -0.659  -3.185  1.00  0.00           O  
HETATM   11  C9  UNL     1      -1.285   0.706  -2.306  1.00  0.00           C  
HETATM   12  C10 UNL     1      -0.626   1.368  -1.090  1.00  0.00           C  
HETATM   13  C11 UNL     1      -0.807   2.868  -1.341  1.00  0.00           C  
HETATM   14  C12 UNL     1      -1.397   1.115   0.142  1.00  0.00           C  
HETATM   15  C13 UNL     1      -0.840   1.416   1.303  1.00  0.00           C  
HETATM   16  C14 UNL     1       0.562   1.992   1.221  1.00  0.00           C  
HETATM   17  C15 UNL     1       1.288   0.982   0.399  1.00  0.00           C  
HETATM   18  C16 UNL     1       2.764   0.880   0.644  1.00  0.00           C  
HETATM   19  C17 UNL     1       3.449   2.229   0.612  1.00  0.00           C  
HETATM   20  C18 UNL     1       2.963   0.352   2.050  1.00  0.00           C  
HETATM   21  C19 UNL     1       2.729  -1.116   2.199  1.00  0.00           C  
HETATM   22  C20 UNL     1       3.806  -1.841   1.445  1.00  0.00           C  
HETATM   23  O3  UNL     1       4.848  -2.244   2.280  1.00  0.00           O  
HETATM   24  C21 UNL     1       4.397  -1.039   0.333  1.00  0.00           C  
HETATM   25  C22 UNL     1       5.683  -0.347   0.662  1.00  0.00           C  
HETATM   26  C23 UNL     1       4.745  -2.067  -0.762  1.00  0.00           C  
HETATM   27  C24 UNL     1       3.381  -0.090  -0.330  1.00  0.00           C  
HETATM   28  C25 UNL     1       2.410  -0.968  -1.024  1.00  0.00           C  
HETATM   29  C26 UNL     1       1.172  -0.361  -1.578  1.00  0.00           C  
HETATM   30  C27 UNL     1       0.839   1.005  -1.010  1.00  0.00           C  
HETATM   31  C28 UNL     1       1.591   1.961  -1.914  1.00  0.00           C  
HETATM   32  C29 UNL     1      -2.765   0.540   0.238  1.00  0.00           C  
HETATM   33  C30 UNL     1      -2.635  -0.729   1.065  1.00  0.00           C  
HETATM   34  H1  UNL     1      -3.811  -3.409   2.143  1.00  0.00           H  
HETATM   35  H2  UNL     1      -4.586  -3.295   0.497  1.00  0.00           H  
HETATM   36  H3  UNL     1      -2.824  -3.115   0.678  1.00  0.00           H  
HETATM   37  H4  UNL     1      -5.444  -1.605   2.845  1.00  0.00           H  
HETATM   38  H5  UNL     1      -4.554  -0.061   2.993  1.00  0.00           H  
HETATM   39  H6  UNL     1      -3.762  -1.664   3.462  1.00  0.00           H  
HETATM   40  H7  UNL     1      -5.818  -1.704   0.391  1.00  0.00           H  
HETATM   41  H8  UNL     1      -5.530   0.012   0.717  1.00  0.00           H  
HETATM   42  H9  UNL     1      -5.190  -0.769  -1.772  1.00  0.00           H  
HETATM   43  H10 UNL     1      -3.948  -1.857  -1.134  1.00  0.00           H  
HETATM   44  H11 UNL     1      -3.606   2.358  -1.759  1.00  0.00           H  
HETATM   45  H12 UNL     1      -4.695   1.149  -2.613  1.00  0.00           H  
HETATM   46  H13 UNL     1      -5.958   2.247  -1.259  1.00  0.00           H  
HETATM   47  H14 UNL     1      -2.004  -1.225  -1.505  1.00  0.00           H  
HETATM   48  H15 UNL     1      -2.469  -1.457  -3.577  1.00  0.00           H  
HETATM   49  H16 UNL     1      -1.802   1.476  -2.960  1.00  0.00           H  
HETATM   50  H17 UNL     1      -0.572   0.247  -2.996  1.00  0.00           H  
HETATM   51  H18 UNL     1      -1.435   3.365  -0.574  1.00  0.00           H  
HETATM   52  H19 UNL     1      -1.386   3.056  -2.296  1.00  0.00           H  
HETATM   53  H20 UNL     1       0.093   3.442  -1.458  1.00  0.00           H  
HETATM   54  H21 UNL     1      -1.289   1.295   2.279  1.00  0.00           H  
HETATM   55  H22 UNL     1       0.950   2.118   2.252  1.00  0.00           H  
HETATM   56  H23 UNL     1       0.470   2.993   0.820  1.00  0.00           H  
HETATM   57  H24 UNL     1       0.915  -0.033   0.788  1.00  0.00           H  
HETATM   58  H25 UNL     1       2.720   3.070   0.812  1.00  0.00           H  
HETATM   59  H26 UNL     1       4.043   2.406  -0.289  1.00  0.00           H  
HETATM   60  H27 UNL     1       4.165   2.355   1.481  1.00  0.00           H  
HETATM   61  H28 UNL     1       4.046   0.531   2.292  1.00  0.00           H  
HETATM   62  H29 UNL     1       2.411   0.868   2.828  1.00  0.00           H  
HETATM   63  H30 UNL     1       1.713  -1.456   2.008  1.00  0.00           H  
HETATM   64  H31 UNL     1       2.916  -1.336   3.292  1.00  0.00           H  
HETATM   65  H32 UNL     1       3.335  -2.794   1.064  1.00  0.00           H  
HETATM   66  H33 UNL     1       4.791  -3.180   2.558  1.00  0.00           H  
HETATM   67  H34 UNL     1       6.029  -0.661   1.691  1.00  0.00           H  
HETATM   68  H35 UNL     1       6.548  -0.675   0.009  1.00  0.00           H  
HETATM   69  H36 UNL     1       5.663   0.747   0.538  1.00  0.00           H  
HETATM   70  H37 UNL     1       4.035  -2.891  -0.796  1.00  0.00           H  
HETATM   71  H38 UNL     1       5.011  -1.593  -1.705  1.00  0.00           H  
HETATM   72  H39 UNL     1       5.708  -2.528  -0.384  1.00  0.00           H  
HETATM   73  H40 UNL     1       4.049   0.511  -1.008  1.00  0.00           H  
HETATM   74  H41 UNL     1       2.986  -1.501  -1.839  1.00  0.00           H  
HETATM   75  H42 UNL     1       2.171  -1.817  -0.314  1.00  0.00           H  
HETATM   76  H43 UNL     1       0.364  -1.105  -1.446  1.00  0.00           H  
HETATM   77  H44 UNL     1       1.328  -0.282  -2.687  1.00  0.00           H  
HETATM   78  H45 UNL     1       2.002   2.838  -1.444  1.00  0.00           H  
HETATM   79  H46 UNL     1       0.895   2.164  -2.785  1.00  0.00           H  
HETATM   80  H47 UNL     1       2.443   1.466  -2.458  1.00  0.00           H  
HETATM   81  H48 UNL     1      -3.452   1.209   0.801  1.00  0.00           H  
HETATM   82  H49 UNL     1      -1.938  -1.404   0.545  1.00  0.00           H  
HETATM   83  H50 UNL     1      -2.203  -0.455   2.040  1.00  0.00           H  
CONECT    1    2   34   35   36
CONECT    2    3    4   33
CONECT    3   37   38   39
CONECT    4    5   40   41
CONECT    5    6   42   43
CONECT    6    7    9   32
CONECT    7    8   44   45
CONECT    8   46
CONECT    9   10   11   47
CONECT   10   48
CONECT   11   12   49   50
CONECT   12   13   14   30
CONECT   13   51   52   53
CONECT   14   15   15   32
CONECT   15   16   54
CONECT   16   17   55   56
CONECT   17   18   30   57
CONECT   18   19   20   27
CONECT   19   58   59   60
CONECT   20   21   61   62
CONECT   21   22   63   64
CONECT   22   23   24   65
CONECT   23   66
CONECT   24   25   26   27
CONECT   25   67   68   69
CONECT   26   70   71   72
CONECT   27   28   73
CONECT   28   29   74   75
CONECT   29   30   76   77
CONECT   30   31
CONECT   31   78   79   80
CONECT   32   33   81
CONECT   33   82   83
END

HMDB0034643
     RDKit          3D
Longispinogenin
 83 87  0  0  0  0  0  0  0  0999 V2000
   -3.7978   -2.8682    1.1618 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.9635   -1.3741    1.3501 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.4412   -1.1396    2.7565 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.0438   -0.9087    0.4030 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.4339   -0.8788   -0.9696 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.4082    0.2640   -1.0903 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.1821    1.4176   -1.6571 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.2470    1.7682   -0.7917 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3375   -0.2815   -1.9832 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.9429   -0.6593   -3.1851 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2851    0.7057   -2.3060 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6262    1.3675   -1.0905 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8074    2.8676   -1.3406 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3966    1.1155    0.1421 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8403    1.4156    1.3030 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.5624    1.9918    1.2211 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.2880    0.9821    0.3990 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.7638    0.8802    0.6443 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.4487    2.2291    0.6118 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.9626    0.3517    2.0499 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.7289   -1.1159    2.1988 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.8057   -1.8406    1.4450 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.8475   -2.2444    2.2805 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.3973   -1.0391    0.3325 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.6832   -0.3468    0.6616 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.7453   -2.0669   -0.7620 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.3814   -0.0904   -0.3304 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.4096   -0.9676   -1.0237 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.1720   -0.3613   -1.5778 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.8390    1.0048   -1.0095 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.5911    1.9606   -1.9139 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7649    0.5404    0.2378 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.6349   -0.7291    1.0649 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.8109   -3.4094    2.1433 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.5856   -3.2951    0.4971 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8238   -3.1150    0.6775 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.4436   -1.6049    2.8446 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.5544   -0.0606    2.9928 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.7622   -1.6645    3.4621 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.8184   -1.7039    0.3909 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.5305    0.0120    0.7175 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.1899   -0.7695   -1.7720 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.9478   -1.8571   -1.1337 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.6055    2.3577   -1.7586 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.6949    1.1490   -2.6130 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.9575    2.2470   -1.2587 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0040   -1.2249   -1.5055 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4690   -1.4568   -3.5769 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.8018    1.4762   -2.9603 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5715    0.2467   -2.9960 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4350    3.3646   -0.5736 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3860    3.0558   -2.2960 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.0932    3.4425   -1.4580 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2887    1.2948    2.2792 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.9497    2.1184    2.2517 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.4701    2.9930    0.8202 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.9148   -0.0326    0.7881 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.7199    3.0702    0.8123 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.0430    2.4057   -0.2895 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.1653    2.3552    1.4809 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.0459    0.5308    2.2918 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.4106    0.8683    2.8282 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.7131   -1.4558    2.0078 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.9155   -1.3361    3.2925 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.3350   -2.7938    1.0640 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.7912   -3.1798    2.5580 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.0292   -0.6609    1.6907 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.5483   -0.6755    0.0090 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.6627    0.7472    0.5377 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.0351   -2.8910   -0.7958 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.0107   -1.5931   -1.7049 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.7083   -2.5276   -0.3836 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.0495    0.5110   -1.0079 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.9865   -1.5007   -1.8391 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.1707   -1.8170   -0.3137 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.3639   -1.1054   -1.4457 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.3281   -0.2816   -2.6873 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.0024    2.8375   -1.4437 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.8953    2.1637   -2.7854 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.4428    1.4658   -2.4578 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.4517    1.2085    0.8008 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9379   -1.4038    0.5450 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2034   -0.4552    2.0402 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  1  0
  2  4  1  0
  4  5  1  0
  5  6  1  0
  6  7  1  0
  7  8  1  0
  6  9  1  0
  9 10  1  0
  9 11  1  0
 11 12  1  0
 12 13  1  0
 12 14  1  0
 14 15  2  0
 15 16  1  0
 16 17  1  0
 17 18  1  0
 18 19  1  0
 18 20  1  0
 20 21  1  0
 21 22  1  0
 22 23  1  0
 22 24  1  0
 24 25  1  0
 24 26  1  0
 24 27  1  0
 27 28  1  0
 28 29  1  0
 29 30  1  0
 30 31  1  0
 14 32  1  0
 32 33  1  0
 33  2  1  0
 32  6  1  0
 30 12  1  0
 30 17  1  0
 27 18  1  0
  1 34  1  0
  1 35  1  0
  1 36  1  0
  3 37  1  0
  3 38  1  0
  3 39  1  0
  4 40  1  0
  4 41  1  0
  5 42  1  0
  5 43  1  0
  7 44  1  0
  7 45  1  0
  8 46  1  0
  9 47  1  0
 10 48  1  0
 11 49  1  0
 11 50  1  0
 13 51  1  0
 13 52  1  0
 13 53  1  0
 15 54  1  0
 16 55  1  0
 16 56  1  0
 17 57  1  0
 19 58  1  0
 19 59  1  0
 19 60  1  0
 20 61  1  0
 20 62  1  0
 21 63  1  0
 21 64  1  0
 22 65  1  0
 23 66  1  0
 25 67  1  0
 25 68  1  0
 25 69  1  0
 26 70  1  0
 26 71  1  0
 26 72  1  0
 27 73  1  0
 28 74  1  0
 28 75  1  0
 29 76  1  0
 29 77  1  0
 31 78  1  0
 31 79  1  0
 31 80  1  0
 32 81  1  0
 33 82  1  0
 33 83  1  0
M  END

View in JSmol View Stereo Labels

Synonyms

Value	Source
(3beta,16beta)-Olean-12-ene-3,16 28-triol	HMDB
(3beta,16beta)-Olean-12-ene-3,16,28-triol	HMDB

Chemical Formula

C₃₀H₅₀O₃

Average Molecular Weight

458.7162

Monoisotopic Molecular Weight

458.375995466

IUPAC Name

8a-(hydroxymethyl)-4,4,6a,6b,11,11,14b-heptamethyl-1,2,3,4,4a,5,6,6a,6b,7,8,8a,9,10,11,12,12a,14,14a,14b-icosahydropicene-3,8-diol

Traditional Name

8a-(hydroxymethyl)-4,4,6a,6b,11,11,14b-heptamethyl-1,2,3,4a,5,6,7,8,9,10,12,12a,14,14a-tetradecahydropicene-3,8-diol

CAS Registry Number

465-94-1

SMILES

CC1(C)CCC2(CO)C(O)CC3(C)C(=CCC4C5(C)CCC(O)C(C)(C)C5CCC34C)C2C1

InChI Identifier

InChI=1S/C30H50O3/c1-25(2)14-15-30(18-31)20(16-25)19-8-9-22-27(5)12-11-23(32)26(3,4)21(27)10-13-28(22,6)29(19,7)17-24(30)33/h8,20-24,31-33H,9-18H2,1-7H3

InChI Key

YHGVYECWZWIVJC-UHFFFAOYSA-N

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as triterpenoids. These are terpene molecules containing six isoprene units.

Kingdom

Organic compounds

Super Class

Lipids and lipid-like molecules

Class

Prenol lipids

Sub Class

Triterpenoids

Direct Parent

Triterpenoids

Alternative Parents

Substituents

Triterpenoid
Cyclic alcohol
Secondary alcohol
Organic oxygen compound
Hydrocarbon derivative
Primary alcohol
Organooxygen compound
Alcohol
Aliphatic homopolycyclic compound

Molecular Framework

Aliphatic homopolycyclic compounds

External Descriptors

Not Available

Ontology

Physiological effect

Not Available

Disposition

Biological location

Cytoplasm (HMDB: HMDB0034643)
Cell membrane (HMDB: HMDB0034643)

Cellular substructure

Extracellular (HMDB: HMDB0034643)
Membrane (HMDB: HMDB0034643)

Route of exposure

Enteral

Ingestion (HMDB: HMDB0034643)

Source

Endogenous

Endogenous (HMDB: HMDB0034643)

Animal

Animal (HMDB: HMDB0034643)

Exogenous

Food

Food (HMDB: HMDB0034643)

Process

Naturally occurring process

Biological process

Chemical reaction

Lipid peroxidation (HMDB: HMDB0034643)

Biochemical process

Fatty acid metabolism (HMDB: HMDB0034643)

Cellular process

Cell signaling (HMDB: HMDB0034643)

Biochemical pathway

Lipid metabolism pathway (HMDB: HMDB0034643)

Role

Biological role

Membrane stabilizer (HMDB: HMDB0034643)

Nutrient

Nutrient (HMDB: HMDB0034643)

Industrial application

Manufacturing industry

Material processing agent

Fluid processing agent

Surfactant

Surfactant (HMDB: HMDB0034643)

Emulsifier (HMDB: HMDB0034643)

Physical Properties

State

Solid

Experimental Molecular Properties

Property	Value	Reference
Melting Point	247 - 249 °C	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	0.0031 mg/L @ 25 °C (est)	The Good Scents Company Information System
LogP	Not Available	Not Available

Experimental Chromatographic Properties

Not Available

Predicted Molecular Properties

Property	Value	Source
Water Solubility	0.004 g/L	ALOGPS
logP	5.73	ALOGPS
logP	4.89	ChemAxon
logS	-5.1	ALOGPS
pKa (Strongest Acidic)	14.45	ChemAxon
pKa (Strongest Basic)	-0.84	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	3	ChemAxon
Hydrogen Donor Count	3	ChemAxon
Polar Surface Area	60.69 Å²	ChemAxon
Rotatable Bond Count	1	ChemAxon
Refractivity	135.2 m³·mol⁻¹	ChemAxon
Polarizability	55.87 Å³	ChemAxon
Number of Rings	5	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	Yes	ChemAxon
Ghose Filter	No	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

Predicted Chromatographic Properties

Predicted Collision Cross Sections

Predictor	Adduct Type	CCS Value (Å²)	Reference
DarkChem	[M+H]+	204.233	31661259
DarkChem	[M-H]-	199.895	31661259
DeepCCS	[M-2H]-	250.142	30932474
DeepCCS	[M+Na]+	225.369	30932474
AllCCS	[M+H]+	216.5	32859911
AllCCS	[M+H-H2O]+	214.9	32859911
AllCCS	[M+NH4]+	218.0	32859911
AllCCS	[M+Na]+	218.5	32859911
AllCCS	[M-H]-	210.4	32859911
AllCCS	[M+Na-2H]-	212.5	32859911
AllCCS	[M+HCOO]-	215.0	32859911

Predicted Kovats Retention Indices

Underivatized

Metabolite	SMILES	Kovats RI Value	Column Type	Reference
Longispinogenin	CC1(C)CCC2(CO)C(O)CC3(C)C(=CCC4C5(C)CCC(O)C(C)(C)C5CCC34C)C2C1	2723.7	Standard polar	33892256
Longispinogenin	CC1(C)CCC2(CO)C(O)CC3(C)C(=CCC4C5(C)CCC(O)C(C)(C)C5CCC34C)C2C1	3535.1	Standard non polar	33892256
Longispinogenin	CC1(C)CCC2(CO)C(O)CC3(C)C(=CCC4C5(C)CCC(O)C(C)(C)C5CCC34C)C2C1	3945.7	Semi standard non polar	33892256

Derivatized

Derivative Name / Structure	SMILES	Kovats RI Value	Column Type	Reference
Longispinogenin,1TMS,isomer #1	CC1(C)CCC2(CO[Si](C)(C)C)C(O)CC3(C)C(=CCC4C5(C)CCC(O)C(C)(C)C5CCC43C)C2C1	3820.7	Semi standard non polar	33892256
Longispinogenin,1TMS,isomer #2	CC1(C)CCC2(CO)C(O[Si](C)(C)C)CC3(C)C(=CCC4C5(C)CCC(O)C(C)(C)C5CCC43C)C2C1	3846.6	Semi standard non polar	33892256
Longispinogenin,1TMS,isomer #3	CC1(C)CCC2(CO)C(O)CC3(C)C(=CCC4C5(C)CCC(O[Si](C)(C)C)C(C)(C)C5CCC43C)C2C1	3850.6	Semi standard non polar	33892256
Longispinogenin,2TMS,isomer #1	CC1(C)CCC2(CO[Si](C)(C)C)C(O[Si](C)(C)C)CC3(C)C(=CCC4C5(C)CCC(O)C(C)(C)C5CCC43C)C2C1	3842.8	Semi standard non polar	33892256
Longispinogenin,2TMS,isomer #2	CC1(C)CCC2(CO[Si](C)(C)C)C(O)CC3(C)C(=CCC4C5(C)CCC(O[Si](C)(C)C)C(C)(C)C5CCC43C)C2C1	3853.3	Semi standard non polar	33892256
Longispinogenin,2TMS,isomer #3	CC1(C)CCC2(CO)C(O[Si](C)(C)C)CC3(C)C(=CCC4C5(C)CCC(O[Si](C)(C)C)C(C)(C)C5CCC43C)C2C1	3797.3	Semi standard non polar	33892256
Longispinogenin,3TMS,isomer #1	CC1(C)CCC2(CO[Si](C)(C)C)C(O[Si](C)(C)C)CC3(C)C(=CCC4C5(C)CCC(O[Si](C)(C)C)C(C)(C)C5CCC43C)C2C1	3714.8	Semi standard non polar	33892256
Longispinogenin,1TBDMS,isomer #1	CC1(C)CCC2(CO[Si](C)(C)C(C)(C)C)C(O)CC3(C)C(=CCC4C5(C)CCC(O)C(C)(C)C5CCC43C)C2C1	4061.3	Semi standard non polar	33892256
Longispinogenin,1TBDMS,isomer #2	CC1(C)CCC2(CO)C(O[Si](C)(C)C(C)(C)C)CC3(C)C(=CCC4C5(C)CCC(O)C(C)(C)C5CCC43C)C2C1	4065.6	Semi standard non polar	33892256
Longispinogenin,1TBDMS,isomer #3	CC1(C)CCC2(CO)C(O)CC3(C)C(=CCC4C5(C)CCC(O[Si](C)(C)C(C)(C)C)C(C)(C)C5CCC43C)C2C1	4070.8	Semi standard non polar	33892256
Longispinogenin,2TBDMS,isomer #1	CC1(C)CCC2(CO[Si](C)(C)C(C)(C)C)C(O[Si](C)(C)C(C)(C)C)CC3(C)C(=CCC4C5(C)CCC(O)C(C)(C)C5CCC43C)C2C1	4272.0	Semi standard non polar	33892256
Longispinogenin,2TBDMS,isomer #2	CC1(C)CCC2(CO[Si](C)(C)C(C)(C)C)C(O)CC3(C)C(=CCC4C5(C)CCC(O[Si](C)(C)C(C)(C)C)C(C)(C)C5CCC43C)C2C1	4297.5	Semi standard non polar	33892256
Longispinogenin,2TBDMS,isomer #3	CC1(C)CCC2(CO)C(O[Si](C)(C)C(C)(C)C)CC3(C)C(=CCC4C5(C)CCC(O[Si](C)(C)C(C)(C)C)C(C)(C)C5CCC43C)C2C1	4221.8	Semi standard non polar	33892256
Longispinogenin,3TBDMS,isomer #1	CC1(C)CCC2(CO[Si](C)(C)C(C)(C)C)C(O[Si](C)(C)C(C)(C)C)CC3(C)C(=CCC4C5(C)CCC(O[Si](C)(C)C(C)(C)C)C(C)(C)C5CCC43C)C2C1	4373.0	Semi standard non polar	33892256

Spectra

GC-MS Spectra

Spectrum Type	Description	Splash Key	Deposition Date	Source	View
Predicted GC-MS	Predicted GC-MS Spectrum - Longispinogenin GC-MS (Non-derivatized) - 70eV, Positive	splash10-01r6-0002900000-7729e7cc70ae23969170	2017-09-01	Wishart Lab	View Spectrum
Predicted GC-MS	Predicted GC-MS Spectrum - Longispinogenin GC-MS (3 TMS) - 70eV, Positive	splash10-08fr-1010029000-a4529a734502598d78d7	2017-10-06	Wishart Lab	View Spectrum
Predicted GC-MS	Predicted GC-MS Spectrum - Longispinogenin GC-MS (Non-derivatized) - 70eV, Positive	Not Available	2021-10-12	Wishart Lab	View Spectrum

MS/MS Spectra

Spectrum Type	Description	Splash Key	Deposition Date	Source	View
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - Longispinogenin 10V, Negative-QTOF	splash10-0a4i-0000900000-e6bd7b7c25d22a1534e8	2015-04-25	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - Longispinogenin 20V, Negative-QTOF	splash10-0a4r-0000900000-09354d2f21d5e1b28981	2015-04-25	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - Longispinogenin 40V, Negative-QTOF	splash10-08i0-0000900000-101ebe0efe277603ba4b	2015-04-25	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - Longispinogenin 10V, Negative-QTOF	splash10-0a4i-0000900000-e6bd7b7c25d22a1534e8	2015-04-25	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - Longispinogenin 20V, Negative-QTOF	splash10-0a4r-0000900000-09354d2f21d5e1b28981	2015-04-25	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - Longispinogenin 40V, Negative-QTOF	splash10-08i0-0000900000-101ebe0efe277603ba4b	2015-04-25	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - Longispinogenin 10V, Negative-QTOF	splash10-0a4i-0000900000-2e8eabc98b7e3f409adf	2021-09-24	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - Longispinogenin 20V, Negative-QTOF	splash10-0a4i-0000900000-ecc355033085062b1f81	2021-09-24	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - Longispinogenin 40V, Negative-QTOF	splash10-0a70-0200900000-baa178b89b9e1f301de2	2021-09-24	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - Longispinogenin 10V, Positive-QTOF	splash10-006x-0000900000-e5f2e218a8afe51373f9	2015-04-24	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - Longispinogenin 20V, Positive-QTOF	splash10-00dl-0011900000-a9a82a10edec03e026ad	2015-04-24	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - Longispinogenin 40V, Positive-QTOF	splash10-01c3-4297500000-d12454027ab7ac20c196	2015-04-24	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - Longispinogenin 10V, Positive-QTOF	splash10-006x-0000900000-e5f2e218a8afe51373f9	2015-04-24	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - Longispinogenin 20V, Positive-QTOF	splash10-00dl-0011900000-a9a82a10edec03e026ad	2015-04-24	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - Longispinogenin 40V, Positive-QTOF	splash10-01c3-4297500000-d12454027ab7ac20c196	2015-04-24	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - Longispinogenin 10V, Positive-QTOF	splash10-0a4i-0000900000-f79713409d63db1c1850	2021-09-24	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - Longispinogenin 20V, Positive-QTOF	splash10-0aou-0934700000-5c973995cfdd60b2422d	2021-09-24	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - Longispinogenin 40V, Positive-QTOF	splash10-00el-1931000000-69184ed1c3bda3ea7912	2021-09-24	Wishart Lab	View Spectrum

Biological Properties

Cellular Locations

Extracellular
Membrane

Biospecimen Locations

Not Available

Tissue Locations

Not Available

Pathways

Not Available

Name	SMPDB/PathBank	KEGG

Normal Concentrations

Not Available

Abnormal Concentrations

Not Available

Associated Disorders and Diseases

Disease References

None

Associated OMIM IDs

None

External Links

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FooDB ID

FDB013166

KNApSAcK ID

C00051318

Chemspider ID

20058471

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

12305723

PDB ID

Not Available

ChEBI ID

Not Available

Food Biomarker Ontology

Not Available

VMH ID

Not Available

MarkerDB ID

Not Available

Good Scents ID

rw1844771

References

Synthesis Reference

Not Available

Material Safety Data Sheet (MSDS)

Not Available

General References

Simons K, Toomre D: Lipid rafts and signal transduction. Nat Rev Mol Cell Biol. 2000 Oct;1(1):31-9. [PubMed:11413487 ]
Watson AD: Thematic review series: systems biology approaches to metabolic and cardiovascular disorders. Lipidomics: a global approach to lipid analysis in biological systems. J Lipid Res. 2006 Oct;47(10):2101-11. Epub 2006 Aug 10. [PubMed:16902246 ]
Sethi JK, Vidal-Puig AJ: Thematic review series: adipocyte biology. Adipose tissue function and plasticity orchestrate nutritional adaptation. J Lipid Res. 2007 Jun;48(6):1253-62. Epub 2007 Mar 20. [PubMed:17374880 ]
Lingwood D, Simons K: Lipid rafts as a membrane-organizing principle. Science. 2010 Jan 1;327(5961):46-50. doi: 10.1126/science.1174621. [PubMed:20044567 ]
(). Yannai, Shmuel. (2004) Dictionary of food compounds with CD-ROM: Additives, flavors, and ingredients. Boca Raton: Chapman & Hall/CRC.. .
Gunstone, Frank D., John L. Harwood, and Albert J. Dijkstra (2007). The lipid handbook with CD-ROM. CRC Press.

Showing metabocard for Longispinogenin (HMDB0034643)

MOL for HMDB0034643 (Longispinogenin)

3D MOL for HMDB0034643 (Longispinogenin)

3D SDF for HMDB0034643 (Longispinogenin)

3D-SDF for HMDB0034643 (Longispinogenin)

PDB for HMDB0034643 (Longispinogenin)

3D PDB for HMDB0034643 (Longispinogenin)

SMILES for HMDB0034643 (Longispinogenin)

INCHI for HMDB0034643 (Longispinogenin)

Structure for HMDB0034643 (Longispinogenin)

3D Structure for HMDB0034643 (Longispinogenin)

Predicted Collision Cross Sections

Predicted Kovats Retention Indices

Underivatized

Derivatized

GC-MS Spectra

MS/MS Spectra