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Record Information
Version5.0
StatusExpected but not Quantified
Creation Date2012-09-11 19:42:41 UTC
Update Date2022-03-07 02:54:14 UTC
HMDB IDHMDB0034787
Secondary Accession Numbers
  • HMDB34787
Metabolite Identification
Common NameNeoacrimarine J
DescriptionNeoacrimarine J belongs to the class of organic compounds known as acridones. These are acridines containing a ketone group attached to the C9 carbon atom of the acridine moiety. Neoacrimarine J has been detected, but not quantified in, citrus. This could make neoacrimarine J a potential biomarker for the consumption of these foods. Based on a literature review very few articles have been published on Neoacrimarine J.
Structure
Data?1563862618
Synonyms
ValueSource
(-)-Neoacrimarine-JHMDB
Chemical FormulaC28H23NO9
Average Molecular Weight517.4835
Monoisotopic Molecular Weight517.137281339
IUPAC Name1,6-dihydroxy-5-({13-hydroxy-12,12-dimethyl-4-oxo-3,11-dioxatricyclo[8.4.0.0²,⁷]tetradeca-1(10),2(7),5,8-tetraen-14-yl}oxy)-3-methoxy-9,10-dihydroacridin-9-one
Traditional Name1,6-dihydroxy-5-({13-hydroxy-12,12-dimethyl-4-oxo-3,11-dioxatricyclo[8.4.0.0²,⁷]tetradeca-1(10),2(7),5,8-tetraen-14-yl}oxy)-3-methoxy-10H-acridin-9-one
CAS Registry Number217199-08-1
SMILES
COC1=CC2=C(C(O)=C1)C(=O)C1=C(N2)C(OC2C(O)C(C)(C)OC3=C2C2=C(C=CC(=O)O2)C=C3)=C(O)C=C1
InChI Identifier
InChI=1S/C28H23NO9/c1-28(2)27(34)26(21-18(38-28)8-4-12-5-9-19(32)36-24(12)21)37-25-16(30)7-6-14-22(25)29-15-10-13(35-3)11-17(31)20(15)23(14)33/h4-11,26-27,30-31,34H,1-3H3,(H,29,33)
InChI KeyLCGFAZIBUURPDA-UHFFFAOYSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as acridones. These are acridines containing a ketone group attached to the C9 carbon atom of the acridine moiety.
KingdomOrganic compounds
Super ClassOrganoheterocyclic compounds
ClassQuinolines and derivatives
Sub ClassBenzoquinolines
Direct ParentAcridones
Alternative Parents
Substituents
  • Acridone
  • Pyranocoumarin
  • Angular pyranocoumarin
  • Pyranochromene
  • 2,2-dimethyl-1-benzopyran
  • Coumarin
  • Dihydroquinolone
  • Chromane
  • Benzopyran
  • Dihydroquinoline
  • 1-benzopyran
  • Anisole
  • Pyranone
  • 1-hydroxy-4-unsubstituted benzenoid
  • 1-hydroxy-2-unsubstituted benzenoid
  • Alkyl aryl ether
  • Benzenoid
  • Pyridine
  • Pyran
  • Vinylogous acid
  • Heteroaromatic compound
  • Vinylogous amide
  • Secondary alcohol
  • Lactone
  • Oxacycle
  • Azacycle
  • Ether
  • Hydrocarbon derivative
  • Organonitrogen compound
  • Organooxygen compound
  • Alcohol
  • Organic nitrogen compound
  • Organic oxygen compound
  • Organopnictogen compound
  • Organic oxide
  • Aromatic heteropolycyclic compound
Molecular FrameworkAromatic heteropolycyclic compounds
External DescriptorsNot Available
Ontology
Physiological effectNot Available
Disposition
ProcessNot Available
Role
Physical Properties
StateNot Available
Experimental Molecular Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
Water Solubility0.034 g/LALOGPS
logP4.45ALOGPS
logP5.26ChemAxon
logS-4.2ALOGPS
pKa (Strongest Acidic)8.42ChemAxon
pKa (Strongest Basic)-3.7ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count9ChemAxon
Hydrogen Donor Count4ChemAxon
Polar Surface Area143.78 ŲChemAxon
Rotatable Bond Count3ChemAxon
Refractivity135.24 m³·mol⁻¹ChemAxon
Polarizability50.83 ųChemAxon
Number of Rings6ChemAxon
BioavailabilityNoChemAxon
Rule of FiveNoChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DeepCCS[M+H]+218.34530932474
DeepCCS[M-H]-216.44930932474
DeepCCS[M-2H]-249.68930932474
DeepCCS[M+Na]+224.19330932474
AllCCS[M+H]+219.732859911
AllCCS[M+H-H2O]+217.832859911
AllCCS[M+NH4]+221.532859911
AllCCS[M+Na]+222.032859911
AllCCS[M-H]-215.932859911
AllCCS[M+Na-2H]-216.132859911
AllCCS[M+HCOO]-216.432859911

Predicted Kovats Retention Indices

Underivatized

MetaboliteSMILESKovats RI ValueColumn TypeReference
Neoacrimarine JCOC1=CC2=C(C(O)=C1)C(=O)C1=C(N2)C(OC2C(O)C(C)(C)OC3=C2C2=C(C=CC(=O)O2)C=C3)=C(O)C=C15650.5Standard polar33892256
Neoacrimarine JCOC1=CC2=C(C(O)=C1)C(=O)C1=C(N2)C(OC2C(O)C(C)(C)OC3=C2C2=C(C=CC(=O)O2)C=C3)=C(O)C=C14183.8Standard non polar33892256
Neoacrimarine JCOC1=CC2=C(C(O)=C1)C(=O)C1=C(N2)C(OC2C(O)C(C)(C)OC3=C2C2=C(C=CC(=O)O2)C=C3)=C(O)C=C14923.2Semi standard non polar33892256

Derivatized

Derivative Name / StructureSMILESKovats RI ValueColumn TypeReference
Neoacrimarine J,1TMS,isomer #1COC1=CC(O[Si](C)(C)C)=C2C(=O)C3=CC=C(O)C(OC4C5=C6OC(=O)C=CC6=CC=C5OC(C)(C)C4O)=C3[NH]C2=C14800.7Semi standard non polar33892256
Neoacrimarine J,1TMS,isomer #2COC1=CC(O)=C2C(=O)C3=CC=C(O)C(OC4C5=C6OC(=O)C=CC6=CC=C5OC(C)(C)C4O[Si](C)(C)C)=C3[NH]C2=C14774.8Semi standard non polar33892256
Neoacrimarine J,1TMS,isomer #3COC1=CC(O)=C2C(=O)C3=CC=C(O[Si](C)(C)C)C(OC4C5=C6OC(=O)C=CC6=CC=C5OC(C)(C)C4O)=C3[NH]C2=C14775.9Semi standard non polar33892256
Neoacrimarine J,1TMS,isomer #4COC1=CC(O)=C2C(=O)C3=CC=C(O)C(OC4C5=C6OC(=O)C=CC6=CC=C5OC(C)(C)C4O)=C3N([Si](C)(C)C)C2=C14875.2Semi standard non polar33892256
Neoacrimarine J,2TMS,isomer #1COC1=CC(O[Si](C)(C)C)=C2C(=O)C3=CC=C(O[Si](C)(C)C)C(OC4C5=C6OC(=O)C=CC6=CC=C5OC(C)(C)C4O)=C3[NH]C2=C14631.3Semi standard non polar33892256
Neoacrimarine J,2TMS,isomer #2COC1=CC(O[Si](C)(C)C)=C2C(=O)C3=CC=C(O)C(OC4C5=C6OC(=O)C=CC6=CC=C5OC(C)(C)C4O[Si](C)(C)C)=C3[NH]C2=C14637.1Semi standard non polar33892256
Neoacrimarine J,2TMS,isomer #3COC1=CC(O[Si](C)(C)C)=C2C(=O)C3=CC=C(O)C(OC4C5=C6OC(=O)C=CC6=CC=C5OC(C)(C)C4O)=C3N([Si](C)(C)C)C2=C14722.5Semi standard non polar33892256
Neoacrimarine J,2TMS,isomer #4COC1=CC(O)=C2C(=O)C3=CC=C(O[Si](C)(C)C)C(OC4C5=C6OC(=O)C=CC6=CC=C5OC(C)(C)C4O[Si](C)(C)C)=C3[NH]C2=C14593.3Semi standard non polar33892256
Neoacrimarine J,2TMS,isomer #5COC1=CC(O)=C2C(=O)C3=CC=C(O)C(OC4C5=C6OC(=O)C=CC6=CC=C5OC(C)(C)C4O[Si](C)(C)C)=C3N([Si](C)(C)C)C2=C14671.7Semi standard non polar33892256
Neoacrimarine J,2TMS,isomer #6COC1=CC(O)=C2C(=O)C3=CC=C(O[Si](C)(C)C)C(OC4C5=C6OC(=O)C=CC6=CC=C5OC(C)(C)C4O)=C3N([Si](C)(C)C)C2=C14664.7Semi standard non polar33892256
Neoacrimarine J,3TMS,isomer #1COC1=CC(O[Si](C)(C)C)=C2C(=O)C3=CC=C(O[Si](C)(C)C)C(OC4C5=C6OC(=O)C=CC6=CC=C5OC(C)(C)C4O[Si](C)(C)C)=C3[NH]C2=C14462.1Semi standard non polar33892256
Neoacrimarine J,3TMS,isomer #2COC1=CC(O[Si](C)(C)C)=C2C(=O)C3=CC=C(O[Si](C)(C)C)C(OC4C5=C6OC(=O)C=CC6=CC=C5OC(C)(C)C4O)=C3N([Si](C)(C)C)C2=C14569.4Semi standard non polar33892256
Neoacrimarine J,3TMS,isomer #3COC1=CC(O[Si](C)(C)C)=C2C(=O)C3=CC=C(O)C(OC4C5=C6OC(=O)C=CC6=CC=C5OC(C)(C)C4O[Si](C)(C)C)=C3N([Si](C)(C)C)C2=C14551.3Semi standard non polar33892256
Neoacrimarine J,3TMS,isomer #4COC1=CC(O)=C2C(=O)C3=CC=C(O[Si](C)(C)C)C(OC4C5=C6OC(=O)C=CC6=CC=C5OC(C)(C)C4O[Si](C)(C)C)=C3N([Si](C)(C)C)C2=C14521.1Semi standard non polar33892256
Neoacrimarine J,4TMS,isomer #1COC1=CC(O[Si](C)(C)C)=C2C(=O)C3=CC=C(O[Si](C)(C)C)C(OC4C5=C6OC(=O)C=CC6=CC=C5OC(C)(C)C4O[Si](C)(C)C)=C3N([Si](C)(C)C)C2=C14447.5Semi standard non polar33892256
Neoacrimarine J,4TMS,isomer #1COC1=CC(O[Si](C)(C)C)=C2C(=O)C3=CC=C(O[Si](C)(C)C)C(OC4C5=C6OC(=O)C=CC6=CC=C5OC(C)(C)C4O[Si](C)(C)C)=C3N([Si](C)(C)C)C2=C14355.4Standard non polar33892256
Neoacrimarine J,1TBDMS,isomer #1COC1=CC(O[Si](C)(C)C(C)(C)C)=C2C(=O)C3=CC=C(O)C(OC4C5=C6OC(=O)C=CC6=CC=C5OC(C)(C)C4O)=C3[NH]C2=C14972.4Semi standard non polar33892256
Neoacrimarine J,1TBDMS,isomer #2COC1=CC(O)=C2C(=O)C3=CC=C(O)C(OC4C5=C6OC(=O)C=CC6=CC=C5OC(C)(C)C4O[Si](C)(C)C(C)(C)C)=C3[NH]C2=C14957.8Semi standard non polar33892256
Neoacrimarine J,1TBDMS,isomer #3COC1=CC(O)=C2C(=O)C3=CC=C(O[Si](C)(C)C(C)(C)C)C(OC4C5=C6OC(=O)C=CC6=CC=C5OC(C)(C)C4O)=C3[NH]C2=C14935.7Semi standard non polar33892256
Neoacrimarine J,1TBDMS,isomer #4COC1=CC(O)=C2C(=O)C3=CC=C(O)C(OC4C5=C6OC(=O)C=CC6=CC=C5OC(C)(C)C4O)=C3N([Si](C)(C)C(C)(C)C)C2=C14937.6Semi standard non polar33892256
Neoacrimarine J,2TBDMS,isomer #1COC1=CC(O[Si](C)(C)C(C)(C)C)=C2C(=O)C3=CC=C(O[Si](C)(C)C(C)(C)C)C(OC4C5=C6OC(=O)C=CC6=CC=C5OC(C)(C)C4O)=C3[NH]C2=C15010.0Semi standard non polar33892256
Neoacrimarine J,2TBDMS,isomer #2COC1=CC(O[Si](C)(C)C(C)(C)C)=C2C(=O)C3=CC=C(O)C(OC4C5=C6OC(=O)C=CC6=CC=C5OC(C)(C)C4O[Si](C)(C)C(C)(C)C)=C3[NH]C2=C15031.8Semi standard non polar33892256
Neoacrimarine J,2TBDMS,isomer #3COC1=CC(O[Si](C)(C)C(C)(C)C)=C2C(=O)C3=CC=C(O)C(OC4C5=C6OC(=O)C=CC6=CC=C5OC(C)(C)C4O)=C3N([Si](C)(C)C(C)(C)C)C2=C15068.7Semi standard non polar33892256
Neoacrimarine J,2TBDMS,isomer #4COC1=CC(O)=C2C(=O)C3=CC=C(O[Si](C)(C)C(C)(C)C)C(OC4C5=C6OC(=O)C=CC6=CC=C5OC(C)(C)C4O[Si](C)(C)C(C)(C)C)=C3[NH]C2=C14987.4Semi standard non polar33892256
Neoacrimarine J,2TBDMS,isomer #5COC1=CC(O)=C2C(=O)C3=CC=C(O)C(OC4C5=C6OC(=O)C=CC6=CC=C5OC(C)(C)C4O[Si](C)(C)C(C)(C)C)=C3N([Si](C)(C)C(C)(C)C)C2=C15034.3Semi standard non polar33892256
Neoacrimarine J,2TBDMS,isomer #6COC1=CC(O)=C2C(=O)C3=CC=C(O[Si](C)(C)C(C)(C)C)C(OC4C5=C6OC(=O)C=CC6=CC=C5OC(C)(C)C4O)=C3N([Si](C)(C)C(C)(C)C)C2=C14999.9Semi standard non polar33892256
Neoacrimarine J,3TBDMS,isomer #1COC1=CC(O[Si](C)(C)C(C)(C)C)=C2C(=O)C3=CC=C(O[Si](C)(C)C(C)(C)C)C(OC4C5=C6OC(=O)C=CC6=CC=C5OC(C)(C)C4O[Si](C)(C)C(C)(C)C)=C3[NH]C2=C15069.7Semi standard non polar33892256
Neoacrimarine J,3TBDMS,isomer #2COC1=CC(O[Si](C)(C)C(C)(C)C)=C2C(=O)C3=CC=C(O[Si](C)(C)C(C)(C)C)C(OC4C5=C6OC(=O)C=CC6=CC=C5OC(C)(C)C4O)=C3N([Si](C)(C)C(C)(C)C)C2=C15124.9Semi standard non polar33892256
Neoacrimarine J,3TBDMS,isomer #3COC1=CC(O[Si](C)(C)C(C)(C)C)=C2C(=O)C3=CC=C(O)C(OC4C5=C6OC(=O)C=CC6=CC=C5OC(C)(C)C4O[Si](C)(C)C(C)(C)C)=C3N([Si](C)(C)C(C)(C)C)C2=C15139.3Semi standard non polar33892256
Neoacrimarine J,3TBDMS,isomer #4COC1=CC(O)=C2C(=O)C3=CC=C(O[Si](C)(C)C(C)(C)C)C(OC4C5=C6OC(=O)C=CC6=CC=C5OC(C)(C)C4O[Si](C)(C)C(C)(C)C)=C3N([Si](C)(C)C(C)(C)C)C2=C15096.7Semi standard non polar33892256
Spectra

GC-MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted GC-MSPredicted GC-MS Spectrum - Neoacrimarine J GC-MS (Non-derivatized) - 70eV, Positivesplash10-0f79-0050910000-aeb55b9de1f42b6a43462017-09-01Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Neoacrimarine J GC-MS (2 TMS) - 70eV, Positivesplash10-0udj-1040439000-9174e2d9eb65dba3a2d72017-10-06Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Neoacrimarine J GC-MS (TMS_1_2) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Neoacrimarine J GC-MS (TMS_2_2) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Neoacrimarine J GC-MS (TMS_2_4) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Neoacrimarine J GC-MS (TMS_2_5) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Neoacrimarine J GC-MS (TMS_3_1) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Neoacrimarine J GC-MS (TMS_3_3) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Neoacrimarine J GC-MS (TMS_3_4) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Neoacrimarine J GC-MS (TBDMS_1_2) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Neoacrimarine J GC-MS (TBDMS_2_2) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Neoacrimarine J GC-MS (TBDMS_2_4) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Neoacrimarine J GC-MS (TBDMS_2_5) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Neoacrimarine J GC-MS (TBDMS_2_6) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Neoacrimarine J GC-MS (TBDMS_3_1) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Neoacrimarine J GC-MS (TBDMS_3_2) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Neoacrimarine J GC-MS (TBDMS_3_3) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Neoacrimarine J GC-MS (TBDMS_3_4) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Neoacrimarine J GC-MS ("Neoacrimarine J,1TMS,#2" TMS) - 70eV, PositiveNot Available2021-10-14Wishart LabView Spectrum

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Neoacrimarine J 10V, Positive-QTOFsplash10-014i-0000190000-cc043a3e6a1d06967cf82016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Neoacrimarine J 20V, Positive-QTOFsplash10-00kb-1020960000-4ffe5811c819fe4792b82016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Neoacrimarine J 40V, Positive-QTOFsplash10-056s-0490100000-72f98b3c106403a4df912016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Neoacrimarine J 10V, Negative-QTOFsplash10-014i-0010490000-d8a852a34ffd9fa979a42016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Neoacrimarine J 20V, Negative-QTOFsplash10-0gi3-1030940000-6edb04aa4e5c69f4da022016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Neoacrimarine J 40V, Negative-QTOFsplash10-0a4l-1190000000-7c20041ab77610a138db2016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Neoacrimarine J 10V, Positive-QTOFsplash10-014i-0000090000-d07950660615b73645a92021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Neoacrimarine J 20V, Positive-QTOFsplash10-01di-0090360000-c97ac671bbd479bb4bb82021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Neoacrimarine J 40V, Positive-QTOFsplash10-046u-2981540000-d8b8129a186746c706992021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Neoacrimarine J 10V, Negative-QTOFsplash10-014i-0000090000-e7b4d088b1b63985642c2021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Neoacrimarine J 20V, Negative-QTOFsplash10-0gb9-0020690000-0011cdc8f1f2a5f052d52021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Neoacrimarine J 40V, Negative-QTOFsplash10-0a4l-0190500000-eac1b4a0f072fcd1ade22021-09-22Wishart LabView Spectrum
Biological Properties
Cellular Locations
  • Membrane
Biospecimen LocationsNot Available
Tissue LocationsNot Available
Pathways
Normal Concentrations
Not Available
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDFDB013344
KNApSAcK IDC00024220
Chemspider ID8681460
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound10506059
PDB IDNot Available
ChEBI IDNot Available
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDNot Available
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General References
  1. (). Yannai, Shmuel. (2004) Dictionary of food compounds with CD-ROM: Additives, flavors, and ingredients. Boca Raton: Chapman & Hall/CRC.. .