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Record Information
Version5.0
StatusExpected but not Quantified
Creation Date2012-09-11 20:04:41 UTC
Update Date2022-03-07 02:54:22 UTC
HMDB IDHMDB0035134
Secondary Accession Numbers
  • HMDB35134
Metabolite Identification
Common NameArmillaridin
DescriptionArmillaridin belongs to the class of organic compounds known as melleolides and analogues. Melleolides and analogues are compounds with a structure characterized by the presence of a 2-hydroxy-4-methoxy-6-methylbenzoic acid derivative linked to a 3,6,6,7b-tetramethyl-cyclobuta[e]indene moiety. Based on a literature review a small amount of articles have been published on Armillaridin.
Structure
Data?1563862671
Synonyms
ValueSource
3-Formyl-2a-hydroxy-6,6,7b-trimethyl-1H,2H,2ah,4ah,5H,6H,7H,7ah,7BH-cyclobuta[e]inden-2-yl 3-chloro-6-hydroxy-4-methoxy-2-methylbenzoic acidHMDB
ArmillaridinMeSH
Chemical FormulaC24H29ClO6
Average Molecular Weight448.936
Monoisotopic Molecular Weight448.165266367
IUPAC Name3-formyl-2a-hydroxy-6,6,7b-trimethyl-1H,2H,2aH,4aH,5H,6H,7H,7aH,7bH-cyclobuta[e]inden-2-yl 3-chloro-6-hydroxy-4-methoxy-2-methylbenzoate
Traditional Name3-formyl-2a-hydroxy-6,6,7b-trimethyl-1H,2H,4aH,5H,7H,7aH-cyclobuta[e]inden-2-yl 3-chloro-6-hydroxy-4-methoxy-2-methylbenzoate
CAS Registry Number96684-80-9
SMILES
COC1=C(Cl)C(C)=C(C(=O)OC2CC3(C)C4CC(C)(C)CC4C=C(C=O)C23O)C(O)=C1
InChI Identifier
InChI=1S/C24H29ClO6/c1-12-19(16(27)7-17(30-5)20(12)25)21(28)31-18-10-23(4)15-9-22(2,3)8-13(15)6-14(11-26)24(18,23)29/h6-7,11,13,15,18,27,29H,8-10H2,1-5H3
InChI KeyQETHRCCHQRWBIJ-UHFFFAOYSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as melleolides and analogues. Melleolides and analogues are compounds with a structure characterized by the presence of a 2-hydroxy-4-methoxy-6-methylbenzoic acid derivative linked to a 3,6,6,7b-tetramethyl-cyclobuta[e]indene moiety.
KingdomOrganic compounds
Super ClassLipids and lipid-like molecules
ClassPrenol lipids
Sub ClassSesquiterpenoids
Direct ParentMelleolides and analogues
Alternative Parents
Substituents
  • Melleolide-skeleton
  • O-hydroxybenzoic acid ester
  • P-methoxybenzoic acid or derivatives
  • Methoxyphenol
  • Benzoate ester
  • Salicylic acid or derivatives
  • 3-halobenzoic acid or derivatives
  • Halobenzoic acid or derivatives
  • Benzoic acid or derivatives
  • Benzoyl
  • 4-halophenol
  • Phenoxy compound
  • M-cresol
  • Anisole
  • 4-chlorophenol
  • Phenol ether
  • Methoxybenzene
  • Chlorobenzene
  • Halobenzene
  • Alkyl aryl ether
  • 1-hydroxy-2-unsubstituted benzenoid
  • Phenol
  • Toluene
  • Aryl halide
  • Monocyclic benzene moiety
  • Aryl chloride
  • Benzenoid
  • Tertiary alcohol
  • Vinylogous acid
  • Cyclobutanol
  • Carboxylic acid ester
  • Monocarboxylic acid or derivatives
  • Ether
  • Carboxylic acid derivative
  • Alcohol
  • Organohalogen compound
  • Organochloride
  • Organooxygen compound
  • Hydrocarbon derivative
  • Organic oxide
  • Aldehyde
  • Carbonyl group
  • Organic oxygen compound
  • Aromatic homopolycyclic compound
Molecular FrameworkAromatic homopolycyclic compounds
External DescriptorsNot Available
Ontology
Physiological effectNot Available
Disposition
Process
Role
Physical Properties
StateSolid
Experimental Molecular Properties
PropertyValueReference
Melting Point132 - 134 °CNot Available
Boiling PointNot AvailableNot Available
Water Solubility0.47 mg/L @ 25 °C (est)The Good Scents Company Information System
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
Water Solubility0.0036 g/LALOGPS
logP4.35ALOGPS
logP4.86ChemAxon
logS-5.1ALOGPS
pKa (Strongest Acidic)9.33ChemAxon
pKa (Strongest Basic)-3.8ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count5ChemAxon
Hydrogen Donor Count2ChemAxon
Polar Surface Area93.06 ŲChemAxon
Rotatable Bond Count5ChemAxon
Refractivity117.33 m³·mol⁻¹ChemAxon
Polarizability47.52 ųChemAxon
Number of Rings4ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterYesChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DeepCCS[M-2H]-238.3930932474
DeepCCS[M+Na]+213.87130932474
AllCCS[M+H]+204.232859911
AllCCS[M+H-H2O]+202.232859911
AllCCS[M+NH4]+206.032859911
AllCCS[M+Na]+206.532859911
AllCCS[M-H]-206.632859911
AllCCS[M+Na-2H]-207.132859911
AllCCS[M+HCOO]-207.932859911

Predicted Kovats Retention Indices

Underivatized

MetaboliteSMILESKovats RI ValueColumn TypeReference
ArmillaridinCOC1=C(Cl)C(C)=C(C(=O)OC2CC3(C)C4CC(C)(C)CC4C=C(C=O)C23O)C(O)=C14341.4Standard polar33892256
ArmillaridinCOC1=C(Cl)C(C)=C(C(=O)OC2CC3(C)C4CC(C)(C)CC4C=C(C=O)C23O)C(O)=C13082.3Standard non polar33892256
ArmillaridinCOC1=C(Cl)C(C)=C(C(=O)OC2CC3(C)C4CC(C)(C)CC4C=C(C=O)C23O)C(O)=C13181.7Semi standard non polar33892256

Derivatized

Derivative Name / StructureSMILESKovats RI ValueColumn TypeReference
Armillaridin,1TMS,isomer #1COC1=CC(O)=C(C(=O)OC2CC3(C)C4CC(C)(C)CC4C=C(C=O)C23O[Si](C)(C)C)C(C)=C1Cl3421.2Semi standard non polar33892256
Armillaridin,1TMS,isomer #2COC1=CC(O[Si](C)(C)C)=C(C(=O)OC2CC3(C)C4CC(C)(C)CC4C=C(C=O)C23O)C(C)=C1Cl3459.5Semi standard non polar33892256
Armillaridin,2TMS,isomer #1COC1=CC(O[Si](C)(C)C)=C(C(=O)OC2CC3(C)C4CC(C)(C)CC4C=C(C=O)C23O[Si](C)(C)C)C(C)=C1Cl3411.4Semi standard non polar33892256
Armillaridin,1TBDMS,isomer #1COC1=CC(O)=C(C(=O)OC2CC3(C)C4CC(C)(C)CC4C=C(C=O)C23O[Si](C)(C)C(C)(C)C)C(C)=C1Cl3657.1Semi standard non polar33892256
Armillaridin,1TBDMS,isomer #2COC1=CC(O[Si](C)(C)C(C)(C)C)=C(C(=O)OC2CC3(C)C4CC(C)(C)CC4C=C(C=O)C23O)C(C)=C1Cl3681.0Semi standard non polar33892256
Armillaridin,2TBDMS,isomer #1COC1=CC(O[Si](C)(C)C(C)(C)C)=C(C(=O)OC2CC3(C)C4CC(C)(C)CC4C=C(C=O)C23O[Si](C)(C)C(C)(C)C)C(C)=C1Cl3859.7Semi standard non polar33892256
Spectra

GC-MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted GC-MSPredicted GC-MS Spectrum - Armillaridin GC-MS (Non-derivatized) - 70eV, Positivesplash10-0a4j-2690000000-d1e2a782cae06dcb00162017-09-01Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Armillaridin GC-MS (2 TMS) - 70eV, Positivesplash10-004i-2090010000-20879ec1fdf21785cd7d2017-10-06Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Armillaridin GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Armillaridin GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Armillaridin 10V, Positive-QTOFsplash10-0002-0340900000-3f3ccad340e6a74edd382016-06-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Armillaridin 20V, Positive-QTOFsplash10-000t-1980400000-3a88f59cdddfd3cb666b2016-06-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Armillaridin 40V, Positive-QTOFsplash10-00kb-2920000000-bdab1fb165eaf2b8a2202016-06-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Armillaridin 10V, Negative-QTOFsplash10-0002-0230900000-72fd4909e00e753b4a0a2016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Armillaridin 20V, Negative-QTOFsplash10-006t-0890800000-a9fab9919d5faa3349432016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Armillaridin 40V, Negative-QTOFsplash10-00di-1940000000-f7446247539fd3204dbe2016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Armillaridin 10V, Negative-QTOFsplash10-0002-0110900000-5414efd65222af1178742021-09-23Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Armillaridin 20V, Negative-QTOFsplash10-00xs-1890600000-85b50da1aad079e7c91a2021-09-23Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Armillaridin 40V, Negative-QTOFsplash10-059t-8920300000-1fbcfdfc74264fa692f02021-09-23Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Armillaridin 10V, Positive-QTOFsplash10-0002-0270900000-6bd11b01d197d22444ea2021-09-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Armillaridin 20V, Positive-QTOFsplash10-0002-1942100000-b8139a5a5531057d9ce32021-09-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Armillaridin 40V, Positive-QTOFsplash10-0002-8983000000-e6a86b002cef7e8982ac2021-09-24Wishart LabView Spectrum
Biological Properties
Cellular Locations
  • Extracellular
  • Membrane
Biospecimen LocationsNot Available
Tissue LocationsNot Available
Pathways
Normal Concentrations
Not Available
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDFDB013770
KNApSAcK IDC00021454
Chemspider ID35013853
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound75629634
PDB IDNot Available
ChEBI IDNot Available
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDrw1847891
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General References
  1. Simons K, Toomre D: Lipid rafts and signal transduction. Nat Rev Mol Cell Biol. 2000 Oct;1(1):31-9. [PubMed:11413487 ]
  2. Watson AD: Thematic review series: systems biology approaches to metabolic and cardiovascular disorders. Lipidomics: a global approach to lipid analysis in biological systems. J Lipid Res. 2006 Oct;47(10):2101-11. Epub 2006 Aug 10. [PubMed:16902246 ]
  3. Sethi JK, Vidal-Puig AJ: Thematic review series: adipocyte biology. Adipose tissue function and plasticity orchestrate nutritional adaptation. J Lipid Res. 2007 Jun;48(6):1253-62. Epub 2007 Mar 20. [PubMed:17374880 ]
  4. Lingwood D, Simons K: Lipid rafts as a membrane-organizing principle. Science. 2010 Jan 1;327(5961):46-50. doi: 10.1126/science.1174621. [PubMed:20044567 ]
  5. (). Yannai, Shmuel. (2004) Dictionary of food compounds with CD-ROM: Additives, flavors, and ingredients. Boca Raton: Chapman & Hall/CRC.. .
  6. Gunstone, Frank D., John L. Harwood, and Albert J. Dijkstra (2007). The lipid handbook with CD-ROM. CRC Press.