Hmdb loader
Record Information
Version5.0
StatusExpected but not Quantified
Creation Date2012-09-11 20:14:42 UTC
Update Date2022-03-07 02:54:27 UTC
HMDB IDHMDB0035288
Secondary Accession Numbers
  • HMDB35288
Metabolite Identification
Common Name(6b,7b,13R)-6,7-Diacetoxy-8,14-labdadiene-13-ol
Description(6b,7b,13R)-6,7-Diacetoxy-8,14-labdadiene-13-ol belongs to the class of organic compounds known as diterpenoids. These are terpene compounds formed by four isoprene units. Based on a literature review a small amount of articles have been published on (6b,7b,13R)-6,7-Diacetoxy-8,14-labdadiene-13-ol.
Structure
Data?1563862695
Synonyms
ValueSource
1-(Acetyloxy)-4-(3-hydroxy-3-methylpent-4-en-1-yl)-3,4a,8,8-tetramethyl-1,2,4a,5,6,7,8,8a-octahydronaphthalen-2-yl acetic acidHMDB
Chemical FormulaC24H38O5
Average Molecular Weight406.5555
Monoisotopic Molecular Weight406.271924326
IUPAC Name1-(acetyloxy)-4-(3-hydroxy-3-methylpent-4-en-1-yl)-3,4a,8,8-tetramethyl-1,2,4a,5,6,7,8,8a-octahydronaphthalen-2-yl acetate
Traditional Name1-(acetyloxy)-4-(3-hydroxy-3-methylpent-4-en-1-yl)-3,4a,8,8-tetramethyl-1,2,5,6,7,8a-hexahydronaphthalen-2-yl acetate
CAS Registry Number260792-29-8
SMILES
CC(=O)OC1C(OC(C)=O)C(C)=C(CCC(C)(O)C=C)C2(C)CCCC(C)(C)C12
InChI Identifier
InChI=1S/C24H38O5/c1-9-23(7,27)14-11-18-15(2)19(28-16(3)25)20(29-17(4)26)21-22(5,6)12-10-13-24(18,21)8/h9,19-21,27H,1,10-14H2,2-8H3
InChI KeyJVKGUKYXQMTNOK-UHFFFAOYSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as diterpenoids. These are terpene compounds formed by four isoprene units.
KingdomOrganic compounds
Super ClassLipids and lipid-like molecules
ClassPrenol lipids
Sub ClassDiterpenoids
Direct ParentDiterpenoids
Alternative Parents
Substituents
  • Diterpenoid
  • Labdane diterpenoid
  • Dicarboxylic acid or derivatives
  • Tertiary alcohol
  • Carboxylic acid ester
  • Carboxylic acid derivative
  • Organic oxygen compound
  • Organic oxide
  • Hydrocarbon derivative
  • Organooxygen compound
  • Carbonyl group
  • Alcohol
  • Aliphatic homopolycyclic compound
Molecular FrameworkAliphatic homopolycyclic compounds
External DescriptorsNot Available
Ontology
Physiological effectNot Available
Disposition
Process
Role
Physical Properties
StateNot Available
Experimental Molecular Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
Water Solubility0.0015 g/LALOGPS
logP4.66ALOGPS
logP3.86ChemAxon
logS-5.4ALOGPS
pKa (Strongest Acidic)18.37ChemAxon
pKa (Strongest Basic)-1.3ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count3ChemAxon
Hydrogen Donor Count1ChemAxon
Polar Surface Area72.83 ŲChemAxon
Rotatable Bond Count8ChemAxon
Refractivity112.99 m³·mol⁻¹ChemAxon
Polarizability46.01 ųChemAxon
Number of Rings2ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterYesChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DarkChem[M+H]+196.45131661259
DarkChem[M-H]-189.76331661259
DeepCCS[M-2H]-231.79430932474
DeepCCS[M+Na]+207.02230932474
AllCCS[M+H]+200.632859911
AllCCS[M+H-H2O]+198.432859911
AllCCS[M+NH4]+202.632859911
AllCCS[M+Na]+203.232859911
AllCCS[M-H]-205.132859911
AllCCS[M+Na-2H]-206.632859911
AllCCS[M+HCOO]-208.332859911

Predicted Kovats Retention Indices

Underivatized

MetaboliteSMILESKovats RI ValueColumn TypeReference
(6b,7b,13R)-6,7-Diacetoxy-8,14-labdadiene-13-olCC(=O)OC1C(OC(C)=O)C(C)=C(CCC(C)(O)C=C)C2(C)CCCC(C)(C)C123296.2Standard polar33892256
(6b,7b,13R)-6,7-Diacetoxy-8,14-labdadiene-13-olCC(=O)OC1C(OC(C)=O)C(C)=C(CCC(C)(O)C=C)C2(C)CCCC(C)(C)C122433.0Standard non polar33892256
(6b,7b,13R)-6,7-Diacetoxy-8,14-labdadiene-13-olCC(=O)OC1C(OC(C)=O)C(C)=C(CCC(C)(O)C=C)C2(C)CCCC(C)(C)C122525.5Semi standard non polar33892256

Derivatized

Derivative Name / StructureSMILESKovats RI ValueColumn TypeReference
(6b,7b,13R)-6,7-Diacetoxy-8,14-labdadiene-13-ol,1TMS,isomer #1C=CC(C)(CCC1=C(C)C(OC(C)=O)C(OC(C)=O)C2C(C)(C)CCCC12C)O[Si](C)(C)C2576.7Semi standard non polar33892256
(6b,7b,13R)-6,7-Diacetoxy-8,14-labdadiene-13-ol,1TBDMS,isomer #1C=CC(C)(CCC1=C(C)C(OC(C)=O)C(OC(C)=O)C2C(C)(C)CCCC12C)O[Si](C)(C)C(C)(C)C2809.7Semi standard non polar33892256
Spectra

GC-MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted GC-MSPredicted GC-MS Spectrum - (6b,7b,13R)-6,7-Diacetoxy-8,14-labdadiene-13-ol GC-MS (Non-derivatized) - 70eV, Positivesplash10-00dl-5019000000-2ef7061198f6e8d128e82017-09-01Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - (6b,7b,13R)-6,7-Diacetoxy-8,14-labdadiene-13-ol GC-MS (1 TMS) - 70eV, Positivesplash10-0296-6202900000-ac4ceb63fbda404dbc942017-10-06Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - (6b,7b,13R)-6,7-Diacetoxy-8,14-labdadiene-13-ol GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (6b,7b,13R)-6,7-Diacetoxy-8,14-labdadiene-13-ol 10V, Positive-QTOFsplash10-05p2-0009100000-f86eceace20fb584e8c02016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (6b,7b,13R)-6,7-Diacetoxy-8,14-labdadiene-13-ol 20V, Positive-QTOFsplash10-00tb-2129000000-13173459acaa033ff9672016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (6b,7b,13R)-6,7-Diacetoxy-8,14-labdadiene-13-ol 40V, Positive-QTOFsplash10-06vi-7294000000-1d331ab4188700da1d852016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (6b,7b,13R)-6,7-Diacetoxy-8,14-labdadiene-13-ol 10V, Negative-QTOFsplash10-0bt9-2009500000-a6421066b767eb4cb4d22016-08-04Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (6b,7b,13R)-6,7-Diacetoxy-8,14-labdadiene-13-ol 20V, Negative-QTOFsplash10-06r2-2009100000-f141f2b991e5d97811092016-08-04Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (6b,7b,13R)-6,7-Diacetoxy-8,14-labdadiene-13-ol 40V, Negative-QTOFsplash10-0a4i-9006000000-f19b95fc64b232806fcc2016-08-04Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (6b,7b,13R)-6,7-Diacetoxy-8,14-labdadiene-13-ol 10V, Negative-QTOFsplash10-0a4i-1003900000-0860aabbbfcb462734ba2021-09-21Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (6b,7b,13R)-6,7-Diacetoxy-8,14-labdadiene-13-ol 20V, Negative-QTOFsplash10-0a4i-9001000000-a618ef321aae255b30df2021-09-21Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (6b,7b,13R)-6,7-Diacetoxy-8,14-labdadiene-13-ol 40V, Negative-QTOFsplash10-0a4j-6069000000-919c1088eb1a87d280762021-09-21Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (6b,7b,13R)-6,7-Diacetoxy-8,14-labdadiene-13-ol 10V, Positive-QTOFsplash10-08i1-0096000000-a02347928d5495295a222021-09-25Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (6b,7b,13R)-6,7-Diacetoxy-8,14-labdadiene-13-ol 20V, Positive-QTOFsplash10-08i1-0129000000-7bfad913bc7f48637d852021-09-25Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (6b,7b,13R)-6,7-Diacetoxy-8,14-labdadiene-13-ol 40V, Positive-QTOFsplash10-0fk9-9386000000-9ed61890bc6d660115792021-09-25Wishart LabView Spectrum
Biological Properties
Cellular Locations
  • Membrane
Biospecimen LocationsNot Available
Tissue LocationsNot Available
Pathways
Normal Concentrations
Not Available
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDFDB013953
KNApSAcK IDNot Available
Chemspider ID13197715
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound18008143
PDB IDNot Available
ChEBI ID171904
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDNot Available
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General References
  1. Simons K, Toomre D: Lipid rafts and signal transduction. Nat Rev Mol Cell Biol. 2000 Oct;1(1):31-9. [PubMed:11413487 ]
  2. Watson AD: Thematic review series: systems biology approaches to metabolic and cardiovascular disorders. Lipidomics: a global approach to lipid analysis in biological systems. J Lipid Res. 2006 Oct;47(10):2101-11. Epub 2006 Aug 10. [PubMed:16902246 ]
  3. Sethi JK, Vidal-Puig AJ: Thematic review series: adipocyte biology. Adipose tissue function and plasticity orchestrate nutritional adaptation. J Lipid Res. 2007 Jun;48(6):1253-62. Epub 2007 Mar 20. [PubMed:17374880 ]
  4. Lingwood D, Simons K: Lipid rafts as a membrane-organizing principle. Science. 2010 Jan 1;327(5961):46-50. doi: 10.1126/science.1174621. [PubMed:20044567 ]
  5. (). Yannai, Shmuel. (2004) Dictionary of food compounds with CD-ROM: Additives, flavors, and ingredients. Boca Raton: Chapman & Hall/CRC.. .
  6. Gunstone, Frank D., John L. Harwood, and Albert J. Dijkstra (2007). The lipid handbook with CD-ROM. CRC Press.