Hmdb loader
Record Information
Version5.0
StatusExpected but not Quantified
Creation Date2012-09-11 20:31:11 UTC
Update Date2022-03-07 02:54:32 UTC
HMDB IDHMDB0035510
Secondary Accession Numbers
  • HMDB35510
Metabolite Identification
Common NameTsugaric acid C
DescriptionTsugaric acid C, also known as tsugarate C, belongs to the class of organic compounds known as triterpenoids. These are terpene molecules containing six isoprene units. Tsugaric acid C is an extremely weak basic (essentially neutral) compound (based on its pKa).
Structure
Data?1563862731
Synonyms
ValueSource
Tsugarate CGenerator
2-[5-(Acetyloxy)-2,6,6,11,15-pentamethyltetracyclo[8.7.0.0²,⁷.0¹¹,¹⁵]heptadec-1(10)-en-14-yl]-5-hydroxy-6-methylhept-6-enoateGenerator
Chemical FormulaC32H50O5
Average Molecular Weight514.7364
Monoisotopic Molecular Weight514.36582471
IUPAC Name2-[5-(acetyloxy)-2,6,6,11,15-pentamethyltetracyclo[8.7.0.0²,⁷.0¹¹,¹⁵]heptadec-1(10)-en-14-yl]-5-hydroxy-6-methylhept-6-enoic acid
Traditional Name2-[5-(acetyloxy)-2,6,6,11,15-pentamethyltetracyclo[8.7.0.0²,⁷.0¹¹,¹⁵]heptadec-1(10)-en-14-yl]-5-hydroxy-6-methylhept-6-enoic acid
CAS Registry Number267649-96-7
SMILES
CC(=C)C(O)CCC(C1CCC2(C)C3=C(CCC12C)C1(C)CCC(OC(C)=O)C(C)(C)C1CC3)C(O)=O
InChI Identifier
InChI=1S/C32H50O5/c1-19(2)25(34)11-9-21(28(35)36)22-13-17-32(8)24-10-12-26-29(4,5)27(37-20(3)33)15-16-30(26,6)23(24)14-18-31(22,32)7/h21-22,25-27,34H,1,9-18H2,2-8H3,(H,35,36)
InChI KeyIPHISYDAYNYHSC-UHFFFAOYSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as triterpenoids. These are terpene molecules containing six isoprene units.
KingdomOrganic compounds
Super ClassLipids and lipid-like molecules
ClassPrenol lipids
Sub ClassTriterpenoids
Direct ParentTriterpenoids
Alternative ParentsNot Available
SubstituentsNot Available
Molecular FrameworkAliphatic homopolycyclic compounds
External DescriptorsNot Available
Ontology
Physiological effectNot Available
Disposition
Process
Role
Physical Properties
StateSolid
Experimental Molecular Properties
PropertyValueReference
Melting Point213 - 215 °CNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
Water Solubility0.0025 g/LALOGPS
logP5.97ALOGPS
logP5.91ChemAxon
logS-5.3ALOGPS
pKa (Strongest Acidic)4.75ChemAxon
pKa (Strongest Basic)-1.5ChemAxon
Physiological Charge-1ChemAxon
Hydrogen Acceptor Count4ChemAxon
Hydrogen Donor Count2ChemAxon
Polar Surface Area83.83 ŲChemAxon
Rotatable Bond Count8ChemAxon
Refractivity145.83 m³·mol⁻¹ChemAxon
Polarizability60.83 ųChemAxon
Number of Rings4ChemAxon
BioavailabilityNoChemAxon
Rule of FiveNoChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleYesChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DarkChem[M+H]+217.80431661259
DarkChem[M-H]-211.04631661259
DeepCCS[M-2H]-252.56230932474
DeepCCS[M+Na]+228.32930932474
AllCCS[M+H]+226.432859911
AllCCS[M+H-H2O]+225.032859911
AllCCS[M+NH4]+227.732859911
AllCCS[M+Na]+228.032859911
AllCCS[M-H]-221.932859911
AllCCS[M+Na-2H]-225.032859911
AllCCS[M+HCOO]-228.632859911

Predicted Kovats Retention Indices

Underivatized

MetaboliteSMILESKovats RI ValueColumn TypeReference
Tsugaric acid CCC(=C)C(O)CCC(C1CCC2(C)C3=C(CCC12C)C1(C)CCC(OC(C)=O)C(C)(C)C1CC3)C(O)=O3803.6Standard polar33892256
Tsugaric acid CCC(=C)C(O)CCC(C1CCC2(C)C3=C(CCC12C)C1(C)CCC(OC(C)=O)C(C)(C)C1CC3)C(O)=O3498.2Standard non polar33892256
Tsugaric acid CCC(=C)C(O)CCC(C1CCC2(C)C3=C(CCC12C)C1(C)CCC(OC(C)=O)C(C)(C)C1CC3)C(O)=O3896.5Semi standard non polar33892256

Derivatized

Derivative Name / StructureSMILESKovats RI ValueColumn TypeReference
Tsugaric acid C,1TMS,isomer #1C=C(C)C(CCC(C(=O)O)C1CCC2(C)C3=C(CCC12C)C1(C)CCC(OC(C)=O)C(C)(C)C1CC3)O[Si](C)(C)C3905.4Semi standard non polar33892256
Tsugaric acid C,1TMS,isomer #2C=C(C)C(O)CCC(C(=O)O[Si](C)(C)C)C1CCC2(C)C3=C(CCC12C)C1(C)CCC(OC(C)=O)C(C)(C)C1CC33799.4Semi standard non polar33892256
Tsugaric acid C,2TMS,isomer #1C=C(C)C(CCC(C(=O)O[Si](C)(C)C)C1CCC2(C)C3=C(CCC12C)C1(C)CCC(OC(C)=O)C(C)(C)C1CC3)O[Si](C)(C)C3798.8Semi standard non polar33892256
Tsugaric acid C,1TBDMS,isomer #1C=C(C)C(CCC(C(=O)O)C1CCC2(C)C3=C(CCC12C)C1(C)CCC(OC(C)=O)C(C)(C)C1CC3)O[Si](C)(C)C(C)(C)C4160.9Semi standard non polar33892256
Tsugaric acid C,1TBDMS,isomer #2C=C(C)C(O)CCC(C(=O)O[Si](C)(C)C(C)(C)C)C1CCC2(C)C3=C(CCC12C)C1(C)CCC(OC(C)=O)C(C)(C)C1CC34054.5Semi standard non polar33892256
Tsugaric acid C,2TBDMS,isomer #1C=C(C)C(CCC(C(=O)O[Si](C)(C)C(C)(C)C)C1CCC2(C)C3=C(CCC12C)C1(C)CCC(OC(C)=O)C(C)(C)C1CC3)O[Si](C)(C)C(C)(C)C4286.7Semi standard non polar33892256
Spectra

GC-MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted GC-MSPredicted GC-MS Spectrum - Tsugaric acid C GC-MS (Non-derivatized) - 70eV, Positivesplash10-0075-4003900000-232c04a70214c72c10352017-09-01Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Tsugaric acid C GC-MS (2 TMS) - 70eV, Positivesplash10-0006-3101069000-0d4255bc3315f178a3a52017-10-06Wishart LabView Spectrum

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Tsugaric acid C 10V, Positive-QTOFsplash10-066s-0000910000-e7f419cd41dbeafec2e02016-08-02Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Tsugaric acid C 20V, Positive-QTOFsplash10-0aba-2002900000-51965181a80638b10a052016-08-02Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Tsugaric acid C 40V, Positive-QTOFsplash10-059w-5019600000-f5c316753b23c3b5ea3d2016-08-02Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Tsugaric acid C 10V, Negative-QTOFsplash10-03di-1000950000-85457e8671a8d355ed852016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Tsugaric acid C 20V, Negative-QTOFsplash10-106r-2100910000-4e5a68ad520c440734172016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Tsugaric acid C 40V, Negative-QTOFsplash10-0a6r-8202900000-842f735959de643510962016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Tsugaric acid C 10V, Negative-QTOFsplash10-0bt9-9000170000-d90d9c308dab8eb3a5c42021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Tsugaric acid C 20V, Negative-QTOFsplash10-0a4i-9000400000-f89ea46bc1c9fc6196032021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Tsugaric acid C 40V, Negative-QTOFsplash10-014i-9001100000-e7f4157faf840761b1fa2021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Tsugaric acid C 10V, Positive-QTOFsplash10-05n0-0001910000-63e85fee215681aebafc2021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Tsugaric acid C 20V, Positive-QTOFsplash10-0f6x-4925500000-7a26ce1a6cdad671beeb2021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Tsugaric acid C 40V, Positive-QTOFsplash10-0006-9525000000-df60f40e808aca9425412021-09-22Wishart LabView Spectrum
Biological Properties
Cellular Locations
  • Extracellular
Biospecimen LocationsNot Available
Tissue LocationsNot Available
Pathways
Normal Concentrations
Not Available
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDFDB014200
KNApSAcK IDNot Available
Chemspider IDNot Available
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound73798969
PDB IDNot Available
ChEBI IDNot Available
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDNot Available
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General References
  1. Simons K, Toomre D: Lipid rafts and signal transduction. Nat Rev Mol Cell Biol. 2000 Oct;1(1):31-9. [PubMed:11413487 ]
  2. Watson AD: Thematic review series: systems biology approaches to metabolic and cardiovascular disorders. Lipidomics: a global approach to lipid analysis in biological systems. J Lipid Res. 2006 Oct;47(10):2101-11. Epub 2006 Aug 10. [PubMed:16902246 ]
  3. Sethi JK, Vidal-Puig AJ: Thematic review series: adipocyte biology. Adipose tissue function and plasticity orchestrate nutritional adaptation. J Lipid Res. 2007 Jun;48(6):1253-62. Epub 2007 Mar 20. [PubMed:17374880 ]
  4. Lingwood D, Simons K: Lipid rafts as a membrane-organizing principle. Science. 2010 Jan 1;327(5961):46-50. doi: 10.1126/science.1174621. [PubMed:20044567 ]
  5. (). Yannai, Shmuel. (2004) Dictionary of food compounds with CD-ROM: Additives, flavors, and ingredients. Boca Raton: Chapman & Hall/CRC.. .
  6. Gunstone, Frank D., John L. Harwood, and Albert J. Dijkstra (2007). The lipid handbook with CD-ROM. CRC Press.