Hmdb loader
Record Information
Version5.0
StatusExpected but not Quantified
Creation Date2012-09-11 20:31:57 UTC
Update Date2022-03-07 02:54:32 UTC
HMDB IDHMDB0035522
Secondary Accession Numbers
  • HMDB35522
Metabolite Identification
Common NameGinsenoyne M
DescriptionGinsenoyne M belongs to the class of organic compounds known as epoxides. Epoxides are compounds containing a cyclic ether with three ring atoms(one oxygen and two carbon atoms). Ginsenoyne M has been detected, but not quantified in, several different foods, such as black tea, green tea, herbal tea, red tea, and teas (Camellia sinensis). This could make ginsenoyne m a potential biomarker for the consumption of these foods. Based on a literature review very few articles have been published on Ginsenoyne M.
Structure
Data?1563862733
SynonymsNot Available
Chemical FormulaC32H46O2
Average Molecular Weight462.7064
Monoisotopic Molecular Weight462.349780716
IUPAC Name(7Z)-14-[5-(3-heptyloxiran-2-yl)penta-1,3-diyn-1-yl]-1,5,5,8-tetramethyl-15-oxatricyclo[9.4.0.0⁴,⁷]pentadeca-7,13-diene
Traditional Name(7Z)-14-[5-(3-heptyloxiran-2-yl)penta-1,3-diyn-1-yl]-1,5,5,8-tetramethyl-15-oxatricyclo[9.4.0.0⁴,⁷]pentadeca-7,13-diene
CAS Registry NumberNot Available
SMILES
CCCCCCCC1OC1CC#CC#CC1=CCC2CC\C(C)=C3\CC(C)(C)C3CCC2(C)O1
InChI Identifier
InChI=1S/C32H46O2/c1-6-7-8-9-12-15-29-30(33-29)16-13-10-11-14-26-20-19-25-18-17-24(2)27-23-31(3,4)28(27)21-22-32(25,5)34-26/h20,25,28-30H,6-9,12,15-19,21-23H2,1-5H3/b27-24-
InChI KeyUZINSQVBXBQDEQ-PNHLSOANSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as epoxides. Epoxides are compounds containing a cyclic ether with three ring atoms(one oxygen and two carbon atoms).
KingdomOrganic compounds
Super ClassOrganoheterocyclic compounds
ClassEpoxides
Sub ClassNot Available
Direct ParentEpoxides
Alternative Parents
Substituents
  • Oxacycle
  • Ether
  • Oxirane
  • Dialkyl ether
  • Organic oxygen compound
  • Hydrocarbon derivative
  • Organooxygen compound
  • Aliphatic heteropolycyclic compound
Molecular FrameworkAliphatic heteropolycyclic compounds
External DescriptorsNot Available
Ontology
Physiological effectNot Available
Disposition
Process
Role
Physical Properties
StateNot Available
Experimental Molecular Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
Water Solubility0.0012 g/LALOGPS
logP8.3ALOGPS
logP8.38ChemAxon
logS-5.6ALOGPS
pKa (Strongest Acidic)18.63ChemAxon
pKa (Strongest Basic)-4.1ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count2ChemAxon
Hydrogen Donor Count0ChemAxon
Polar Surface Area21.76 ŲChemAxon
Rotatable Bond Count10ChemAxon
Refractivity145 m³·mol⁻¹ChemAxon
Polarizability60.21 ųChemAxon
Number of Rings4ChemAxon
BioavailabilityYesChemAxon
Rule of FiveNoChemAxon
Ghose FilterNoChemAxon
Veber's RuleYesChemAxon
MDDR-like RuleYesChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DarkChem[M+H]+215.39631661259
DarkChem[M-H]-218.55731661259
DeepCCS[M+H]+218.91130932474
DeepCCS[M-H]-216.55330932474
DeepCCS[M-2H]-250.77130932474
DeepCCS[M+Na]+225.99930932474
AllCCS[M+H]+222.832859911
AllCCS[M+H-H2O]+220.832859911
AllCCS[M+NH4]+224.532859911
AllCCS[M+Na]+225.132859911
AllCCS[M-H]-223.332859911
AllCCS[M+Na-2H]-226.632859911
AllCCS[M+HCOO]-230.432859911

Predicted Kovats Retention Indices

Underivatized

MetaboliteSMILESKovats RI ValueColumn TypeReference
Ginsenoyne MCCCCCCCC1OC1CC#CC#CC1=CCC2CC\C(C)=C3\CC(C)(C)C3CCC2(C)O15080.9Standard polar33892256
Ginsenoyne MCCCCCCCC1OC1CC#CC#CC1=CCC2CC\C(C)=C3\CC(C)(C)C3CCC2(C)O13627.1Standard non polar33892256
Ginsenoyne MCCCCCCCC1OC1CC#CC#CC1=CCC2CC\C(C)=C3\CC(C)(C)C3CCC2(C)O13671.5Semi standard non polar33892256
Spectra

GC-MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted GC-MSPredicted GC-MS Spectrum - Ginsenoyne M GC-MS (Non-derivatized) - 70eV, Positivesplash10-053r-6223900000-775413d0e4d9993122802017-09-01Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Ginsenoyne M GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Ginsenoyne M 10V, Positive-QTOFsplash10-03di-1122900000-8b47e579c79ccd40737a2016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Ginsenoyne M 20V, Positive-QTOFsplash10-001a-7696200000-0daf22cea87a965c796b2016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Ginsenoyne M 40V, Positive-QTOFsplash10-0ka6-9580000000-3defae1867d0ef1f1d6a2016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Ginsenoyne M 10V, Negative-QTOFsplash10-03di-0111900000-53050895c8a956baa7262016-08-04Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Ginsenoyne M 20V, Negative-QTOFsplash10-03e9-0983700000-b3c96114a14cbd22389a2016-08-04Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Ginsenoyne M 40V, Negative-QTOFsplash10-0006-8953300000-b9c2f997e816eb47c2ea2016-08-04Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Ginsenoyne M 10V, Negative-QTOFsplash10-03di-0000900000-a09d75024f62f6c4e97a2021-09-21Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Ginsenoyne M 20V, Negative-QTOFsplash10-03di-0103900000-0fe9b6caf72bd004e31b2021-09-21Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Ginsenoyne M 40V, Negative-QTOFsplash10-0089-0009200000-809553bd4cd96ed377752021-09-21Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Ginsenoyne M 10V, Positive-QTOFsplash10-03di-0001900000-0b293e24536b61cf09072021-09-25Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Ginsenoyne M 20V, Positive-QTOFsplash10-0a4i-1014900000-8d50426d8925d277b51c2021-09-25Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Ginsenoyne M 40V, Positive-QTOFsplash10-0abc-7019100000-9285b5490bfa7567bf682021-09-25Wishart LabView Spectrum
Biological Properties
Cellular Locations
  • Extracellular
  • Membrane
Biospecimen LocationsNot Available
Tissue LocationsNot Available
Pathways
Normal Concentrations
Not Available
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDFDB014214
KNApSAcK IDNot Available
Chemspider ID35013945
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound10595178
PDB IDNot Available
ChEBI IDNot Available
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDNot Available
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General References
  1. (). Yannai, Shmuel. (2004) Dictionary of food compounds with CD-ROM: Additives, flavors, and ingredients. Boca Raton: Chapman & Hall/CRC.. .