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Record Information
Version5.0
StatusExpected but not Quantified
Creation Date2012-09-11 20:39:03 UTC
Update Date2022-03-07 02:54:35 UTC
HMDB IDHMDB0035640
Secondary Accession Numbers
  • HMDB35640
Metabolite Identification
Common NameSintaxanthin
DescriptionSintaxanthin belongs to the class of organic compounds known as triterpenoids. These are terpene molecules containing six isoprene units. Based on a literature review a small amount of articles have been published on Sintaxanthin.
Structure
Data?1563862749
Synonyms
ValueSource
7',8'-dihydro-7'-apo-b-Caroten-8'-oneHMDB
7',8'-dihydro-7'-apo-beta-Caroten-8'-oneHMDB
7'-apo-b-Caroten-8'-oneHMDB
Chemical FormulaC31H42O
Average Molecular Weight430.6646
Monoisotopic Molecular Weight430.323565966
IUPAC Name(3E,5E,7E,9Z,11E,13E,15Z,17E)-3,7,12,16-tetramethyl-18-(2,6,6-trimethylcyclohex-1-en-1-yl)octadeca-3,5,7,9,11,13,15,17-octaen-2-one
Traditional Name(3E,5E,7E,9Z,11E,13E,15Z,17E)-3,7,12,16-tetramethyl-18-(2,6,6-trimethylcyclohex-1-en-1-yl)octadeca-3,5,7,9,11,13,15,17-octaen-2-one
CAS Registry Number4586-97-4
SMILES
CC(=O)C(\C)=C\C=C\C(\C)=C\C=C/C=C(\C)/C=C/C=C(/C)\C=C\C1=C(C)CCCC1(C)C
InChI Identifier
InChI=1S/C31H42O/c1-24(14-9-10-15-25(2)18-12-19-27(4)29(6)32)16-11-17-26(3)21-22-30-28(5)20-13-23-31(30,7)8/h9-12,14-19,21-22H,13,20,23H2,1-8H3/b10-9-,16-11+,18-12+,22-21+,24-14+,25-15+,26-17-,27-19+
InChI KeySLQHGWZKKZPZEK-ZQFWBWLTSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as triterpenoids. These are terpene molecules containing six isoprene units.
KingdomOrganic compounds
Super ClassLipids and lipid-like molecules
ClassPrenol lipids
Sub ClassTriterpenoids
Direct ParentTriterpenoids
Alternative Parents
Substituents
  • Triterpenoid
  • Alpha-branched alpha,beta-unsaturated-ketone
  • Alpha,beta-unsaturated ketone
  • Enone
  • Acryloyl-group
  • Ketone
  • Organic oxygen compound
  • Organic oxide
  • Hydrocarbon derivative
  • Organooxygen compound
  • Carbonyl group
  • Aliphatic homomonocyclic compound
Molecular FrameworkAliphatic homomonocyclic compounds
External DescriptorsNot Available
Ontology
Physiological effectNot Available
Disposition
Process
Role
Physical Properties
StateSolid
Experimental Molecular Properties
PropertyValueReference
Melting Point144 - 145 °CNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
Water Solubility0.00071 g/LALOGPS
logP8.11ALOGPS
logP8.09ChemAxon
logS-5.8ALOGPS
pKa (Strongest Acidic)19.6ChemAxon
pKa (Strongest Basic)-4.5ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count1ChemAxon
Hydrogen Donor Count0ChemAxon
Polar Surface Area17.07 ŲChemAxon
Rotatable Bond Count9ChemAxon
Refractivity151.26 m³·mol⁻¹ChemAxon
Polarizability55.63 ųChemAxon
Number of Rings1ChemAxon
BioavailabilityYesChemAxon
Rule of FiveNoChemAxon
Ghose FilterNoChemAxon
Veber's RuleYesChemAxon
MDDR-like RuleNoChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DeepCCS[M+H]+225.82830932474
DeepCCS[M-H]-223.43330932474
DeepCCS[M-2H]-256.31730932474
DeepCCS[M+Na]+231.74130932474
AllCCS[M+H]+217.732859911
AllCCS[M+H-H2O]+215.432859911
AllCCS[M+NH4]+219.832859911
AllCCS[M+Na]+220.432859911
AllCCS[M-H]-206.232859911
AllCCS[M+Na-2H]-208.332859911
AllCCS[M+HCOO]-210.732859911

Predicted Kovats Retention Indices

Underivatized

MetaboliteSMILESKovats RI ValueColumn TypeReference
SintaxanthinCC(=O)C(\C)=C\C=C\C(\C)=C\C=C/C=C(\C)/C=C/C=C(/C)\C=C\C1=C(C)CCCC1(C)C4400.9Standard polar33892256
SintaxanthinCC(=O)C(\C)=C\C=C\C(\C)=C\C=C/C=C(\C)/C=C/C=C(/C)\C=C\C1=C(C)CCCC1(C)C3692.7Standard non polar33892256
SintaxanthinCC(=O)C(\C)=C\C=C\C(\C)=C\C=C/C=C(\C)/C=C/C=C(/C)\C=C\C1=C(C)CCCC1(C)C3644.2Semi standard non polar33892256

Derivatized

Derivative Name / StructureSMILESKovats RI ValueColumn TypeReference
Sintaxanthin,1TMS,isomer #1C=C(O[Si](C)(C)C)/C(C)=C/C=C/C(C)=C/C=C\C=C(C)\C=C\C=C(C)/C=C/C1=C(C)CCCC1(C)C3773.7Semi standard non polar33892256
Sintaxanthin,1TMS,isomer #1C=C(O[Si](C)(C)C)/C(C)=C/C=C/C(C)=C/C=C\C=C(C)\C=C\C=C(C)/C=C/C1=C(C)CCCC1(C)C3646.6Standard non polar33892256
Sintaxanthin,1TBDMS,isomer #1C=C(O[Si](C)(C)C(C)(C)C)/C(C)=C/C=C/C(C)=C/C=C\C=C(C)\C=C\C=C(C)/C=C/C1=C(C)CCCC1(C)C3959.6Semi standard non polar33892256
Sintaxanthin,1TBDMS,isomer #1C=C(O[Si](C)(C)C(C)(C)C)/C(C)=C/C=C/C(C)=C/C=C\C=C(C)\C=C\C=C(C)/C=C/C1=C(C)CCCC1(C)C3873.6Standard non polar33892256
Spectra

GC-MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted GC-MSPredicted GC-MS Spectrum - Sintaxanthin GC-MS (Non-derivatized) - 70eV, Positivesplash10-014i-4213900000-a9d1508ad422412c5f6c2017-09-01Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Sintaxanthin GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Sintaxanthin 10V, Positive-QTOFsplash10-001r-1454900000-9702bee7ddf7677635022016-06-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Sintaxanthin 20V, Positive-QTOFsplash10-001c-0595100000-253b559acdefbf1680182016-06-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Sintaxanthin 40V, Positive-QTOFsplash10-0gb9-5964100000-ac842607a1995716c37f2016-06-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Sintaxanthin 10V, Negative-QTOFsplash10-004i-0000900000-bce25ecf638d8319f5372016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Sintaxanthin 20V, Negative-QTOFsplash10-004r-1006900000-32bf052517b73e9ab8992016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Sintaxanthin 40V, Negative-QTOFsplash10-01w0-3539400000-905a61e68b4a35cb38c52016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Sintaxanthin 10V, Positive-QTOFsplash10-003i-1239200000-1bfaed6ab4c9ace3b4472021-09-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Sintaxanthin 20V, Positive-QTOFsplash10-0036-4729000000-aff0c1ffb771e49fea932021-09-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Sintaxanthin 40V, Positive-QTOFsplash10-0541-3940000000-7e593fdc2ec8da3b75f62021-09-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Sintaxanthin 10V, Negative-QTOFsplash10-004i-0001900000-ef02f99053d02badde1d2021-09-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Sintaxanthin 20V, Negative-QTOFsplash10-002r-3419500000-a5d9c69cf5cca51f88e82021-09-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Sintaxanthin 40V, Negative-QTOFsplash10-014l-4219000000-5fbcf5480c254b8f5fa12021-09-24Wishart LabView Spectrum
Biological Properties
Cellular Locations
  • Extracellular
  • Membrane
Biospecimen LocationsNot Available
Tissue LocationsNot Available
Pathways
Normal Concentrations
Not Available
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDFDB014350
KNApSAcK IDC00023107
Chemspider ID30777142
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound131751825
PDB IDNot Available
ChEBI IDNot Available
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDNot Available
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General References
  1. Simons K, Toomre D: Lipid rafts and signal transduction. Nat Rev Mol Cell Biol. 2000 Oct;1(1):31-9. [PubMed:11413487 ]
  2. Watson AD: Thematic review series: systems biology approaches to metabolic and cardiovascular disorders. Lipidomics: a global approach to lipid analysis in biological systems. J Lipid Res. 2006 Oct;47(10):2101-11. Epub 2006 Aug 10. [PubMed:16902246 ]
  3. Sethi JK, Vidal-Puig AJ: Thematic review series: adipocyte biology. Adipose tissue function and plasticity orchestrate nutritional adaptation. J Lipid Res. 2007 Jun;48(6):1253-62. Epub 2007 Mar 20. [PubMed:17374880 ]
  4. Lingwood D, Simons K: Lipid rafts as a membrane-organizing principle. Science. 2010 Jan 1;327(5961):46-50. doi: 10.1126/science.1174621. [PubMed:20044567 ]
  5. (). Yannai, Shmuel. (2004) Dictionary of food compounds with CD-ROM: Additives, flavors, and ingredients. Boca Raton: Chapman & Hall/CRC.. .
  6. Gunstone, Frank D., John L. Harwood, and Albert J. Dijkstra (2007). The lipid handbook with CD-ROM. CRC Press.