Hmdb loader
Record Information
Version5.0
StatusExpected but not Quantified
Creation Date2012-09-11 20:47:55 UTC
Update Date2022-03-07 02:54:37 UTC
HMDB IDHMDB0035777
Secondary Accession Numbers
  • HMDB35777
Metabolite Identification
Common NameBetulafolienetriol
DescriptionProtopanaxadiol is found in tea. Sapogenin of Ginsenosides Rb1, Rb2 and Re from Panax ginseng (ginseng) Protopanaxadiol (PPD) is an organic coumpound characterizing a group of ginsenosides. It is a dammarane-type tetracyclic terpene sapogenin found in ginseng (Panax ginseng) and in notoginseng (Panax pseudoginseng)
Structure
Data?1563862770
Synonyms
ValueSource
ArmillarizinHMDB
(3alpha,12beta)-Dammar-24-ene-3,12,20-triolHMDB
3-EpibetulafolientriolHMDB
BetulafolientriolHMDB
Betulafolientriol, 3-epimerHMDB
Protopanaxadiol, (3beta,12beta)-isomerMeSH, HMDB
20(S)-ProtopanaxadiolMeSH, HMDB
Chemical FormulaC30H52O3
Average Molecular Weight460.7321
Monoisotopic Molecular Weight460.39164553
IUPAC Name14-(2-hydroxy-6-methylhept-5-en-2-yl)-2,6,6,10,11-pentamethyltetracyclo[8.7.0.0²,⁷.0¹¹,¹⁵]heptadecane-5,16-diol
Traditional Name14-(2-hydroxy-6-methylhept-5-en-2-yl)-2,6,6,10,11-pentamethyltetracyclo[8.7.0.0²,⁷.0¹¹,¹⁵]heptadecane-5,16-diol
CAS Registry NumberNot Available
SMILES
CC(C)=CCCC(C)(O)C1CCC2(C)C1C(O)CC1C3(C)CCC(O)C(C)(C)C3CCC21C
InChI Identifier
InChI=1S/C30H52O3/c1-19(2)10-9-14-30(8,33)20-11-16-29(7)25(20)21(31)18-23-27(5)15-13-24(32)26(3,4)22(27)12-17-28(23,29)6/h10,20-25,31-33H,9,11-18H2,1-8H3
InChI KeyPYXFVCFISTUSOO-UHFFFAOYSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as diterpenoids. These are terpene compounds formed by four isoprene units.
KingdomOrganic compounds
Super ClassLipids and lipid-like molecules
ClassPrenol lipids
Sub ClassDiterpenoids
Direct ParentDiterpenoids
Alternative Parents
Substituents
  • Diterpenoid
  • P-hydroxybenzoic acid alkyl ester
  • P-hydroxybenzoic acid ester
  • O-hydroxybenzoic acid ester
  • Dihydroxybenzoic acid
  • Benzoate ester
  • Salicylic acid or derivatives
  • Benzoic acid or derivatives
  • P-cresol
  • Benzoyl
  • Resorcinol
  • O-cresol
  • 1-hydroxy-2-unsubstituted benzenoid
  • Phenol
  • Toluene
  • Benzenoid
  • Monocyclic benzene moiety
  • Vinylogous acid
  • Cyclic alcohol
  • Tertiary alcohol
  • Secondary alcohol
  • Cyclobutanol
  • Carboxylic acid ester
  • Carboxylic acid derivative
  • Monocarboxylic acid or derivatives
  • Organic oxygen compound
  • Alcohol
  • Hydrocarbon derivative
  • Organic oxide
  • Organooxygen compound
  • Primary alcohol
  • Aromatic homopolycyclic compound
Molecular FrameworkAromatic homopolycyclic compounds
External DescriptorsNot Available
Ontology
Physiological effectNot Available
Disposition
ProcessNot Available
RoleNot Available
Physical Properties
StateSolid
Experimental Molecular Properties
PropertyValueReference
Melting Point236 - 238 °CNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
Water Solubility0.0035 g/LALOGPS
logP5.36ALOGPS
logP5.53ChemAxon
logS-5.1ALOGPS
pKa (Strongest Acidic)14.53ChemAxon
pKa (Strongest Basic)-0.84ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count3ChemAxon
Hydrogen Donor Count3ChemAxon
Polar Surface Area60.69 ŲChemAxon
Rotatable Bond Count4ChemAxon
Refractivity137.24 m³·mol⁻¹ChemAxon
Polarizability57.16 ųChemAxon
Number of Rings4ChemAxon
BioavailabilityYesChemAxon
Rule of FiveNoChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DarkChem[M+H]+210.53131661259
DarkChem[M-H]-203.7931661259
DeepCCS[M-2H]-246.00730932474
DeepCCS[M+Na]+221.23530932474
AllCCS[M+H]+218.132859911
AllCCS[M+H-H2O]+216.532859911
AllCCS[M+NH4]+219.732859911
AllCCS[M+Na]+220.132859911
AllCCS[M-H]-215.332859911
AllCCS[M+Na-2H]-218.032859911
AllCCS[M+HCOO]-221.132859911

Predicted Kovats Retention Indices

Underivatized

MetaboliteSMILESKovats RI ValueColumn TypeReference
BetulafolienetriolCC(C)=CCCC(C)(O)C1CCC2(C)C1C(O)CC1C3(C)CCC(O)C(C)(C)C3CCC21C2644.8Standard polar33892256
BetulafolienetriolCC(C)=CCCC(C)(O)C1CCC2(C)C1C(O)CC1C3(C)CCC(O)C(C)(C)C3CCC21C3163.4Standard non polar33892256
BetulafolienetriolCC(C)=CCCC(C)(O)C1CCC2(C)C1C(O)CC1C3(C)CCC(O)C(C)(C)C3CCC21C3712.7Semi standard non polar33892256

Derivatized

Derivative Name / StructureSMILESKovats RI ValueColumn TypeReference
Betulafolienetriol,1TMS,isomer #1CC(C)=CCCC(C)(O[Si](C)(C)C)C1CCC2(C)C1C(O)CC1C3(C)CCC(O)C(C)(C)C3CCC12C3738.2Semi standard non polar33892256
Betulafolienetriol,1TMS,isomer #2CC(C)=CCCC(C)(O)C1CCC2(C)C1C(O[Si](C)(C)C)CC1C3(C)CCC(O)C(C)(C)C3CCC12C3741.6Semi standard non polar33892256
Betulafolienetriol,1TMS,isomer #3CC(C)=CCCC(C)(O)C1CCC2(C)C1C(O)CC1C3(C)CCC(O[Si](C)(C)C)C(C)(C)C3CCC12C3757.0Semi standard non polar33892256
Betulafolienetriol,2TMS,isomer #1CC(C)=CCCC(C)(O[Si](C)(C)C)C1CCC2(C)C1C(O[Si](C)(C)C)CC1C3(C)CCC(O)C(C)(C)C3CCC12C3716.5Semi standard non polar33892256
Betulafolienetriol,2TMS,isomer #2CC(C)=CCCC(C)(O[Si](C)(C)C)C1CCC2(C)C1C(O)CC1C3(C)CCC(O[Si](C)(C)C)C(C)(C)C3CCC12C3713.1Semi standard non polar33892256
Betulafolienetriol,2TMS,isomer #3CC(C)=CCCC(C)(O)C1CCC2(C)C1C(O[Si](C)(C)C)CC1C3(C)CCC(O[Si](C)(C)C)C(C)(C)C3CCC12C3617.7Semi standard non polar33892256
Betulafolienetriol,3TMS,isomer #1CC(C)=CCCC(C)(O[Si](C)(C)C)C1CCC2(C)C1C(O[Si](C)(C)C)CC1C3(C)CCC(O[Si](C)(C)C)C(C)(C)C3CCC12C3601.5Semi standard non polar33892256
Betulafolienetriol,1TBDMS,isomer #1CC(C)=CCCC(C)(O[Si](C)(C)C(C)(C)C)C1CCC2(C)C1C(O)CC1C3(C)CCC(O)C(C)(C)C3CCC12C3959.1Semi standard non polar33892256
Betulafolienetriol,1TBDMS,isomer #2CC(C)=CCCC(C)(O)C1CCC2(C)C1C(O[Si](C)(C)C(C)(C)C)CC1C3(C)CCC(O)C(C)(C)C3CCC12C3961.3Semi standard non polar33892256
Betulafolienetriol,1TBDMS,isomer #3CC(C)=CCCC(C)(O)C1CCC2(C)C1C(O)CC1C3(C)CCC(O[Si](C)(C)C(C)(C)C)C(C)(C)C3CCC12C3977.5Semi standard non polar33892256
Betulafolienetriol,2TBDMS,isomer #1CC(C)=CCCC(C)(O[Si](C)(C)C(C)(C)C)C1CCC2(C)C1C(O[Si](C)(C)C(C)(C)C)CC1C3(C)CCC(O)C(C)(C)C3CCC12C4164.5Semi standard non polar33892256
Betulafolienetriol,2TBDMS,isomer #2CC(C)=CCCC(C)(O[Si](C)(C)C(C)(C)C)C1CCC2(C)C1C(O)CC1C3(C)CCC(O[Si](C)(C)C(C)(C)C)C(C)(C)C3CCC12C4158.6Semi standard non polar33892256
Betulafolienetriol,2TBDMS,isomer #3CC(C)=CCCC(C)(O)C1CCC2(C)C1C(O[Si](C)(C)C(C)(C)C)CC1C3(C)CCC(O[Si](C)(C)C(C)(C)C)C(C)(C)C3CCC12C4059.6Semi standard non polar33892256
Betulafolienetriol,3TBDMS,isomer #1CC(C)=CCCC(C)(O[Si](C)(C)C(C)(C)C)C1CCC2(C)C1C(O[Si](C)(C)C(C)(C)C)CC1C3(C)CCC(O[Si](C)(C)C(C)(C)C)C(C)(C)C3CCC12C4265.7Semi standard non polar33892256
Spectra

GC-MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted GC-MSPredicted GC-MS Spectrum - Betulafolienetriol GC-MS (Non-derivatized) - 70eV, Positivesplash10-05ow-1244900000-c1cf3b2da297bff331df2017-09-01Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Betulafolienetriol GC-MS (3 TMS) - 70eV, Positivesplash10-03di-2120139000-d6a8fd222409cacdd9222017-10-06Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Betulafolienetriol GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Betulafolienetriol GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Betulafolienetriol GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Betulafolienetriol GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Betulafolienetriol GC-MS (TMS_1_1) - 70eV, PositiveNot Available2021-11-03Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Betulafolienetriol GC-MS (TMS_1_3) - 70eV, PositiveNot Available2021-11-03Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Betulafolienetriol GC-MS (TMS_2_1) - 70eV, PositiveNot Available2021-11-03Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Betulafolienetriol GC-MS (TMS_2_2) - 70eV, PositiveNot Available2021-11-03Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Betulafolienetriol GC-MS (TMS_2_3) - 70eV, PositiveNot Available2021-11-03Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Betulafolienetriol GC-MS (TBDMS_2_2) - 70eV, PositiveNot Available2021-11-03Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Betulafolienetriol GC-MS (TBDMS_2_3) - 70eV, PositiveNot Available2021-11-03Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Betulafolienetriol GC-MS (TBDMS_3_1) - 70eV, PositiveNot Available2021-11-03Wishart LabView Spectrum

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Betulafolienetriol 10V, Positive-QTOFsplash10-002f-0000900000-1a87a9c1164f963f96462015-04-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Betulafolienetriol 20V, Positive-QTOFsplash10-00ou-2018900000-ddf6dab620a31407c0f92015-04-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Betulafolienetriol 40V, Positive-QTOFsplash10-014i-4429300000-5eb2f2adf06738c41b5e2015-04-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Betulafolienetriol 10V, Positive-QTOFsplash10-002f-0000900000-1a87a9c1164f963f96462015-04-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Betulafolienetriol 20V, Positive-QTOFsplash10-00ou-2018900000-ddf6dab620a31407c0f92015-04-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Betulafolienetriol 40V, Positive-QTOFsplash10-014i-4429300000-5eb2f2adf06738c41b5e2015-04-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Betulafolienetriol 10V, Positive-QTOFsplash10-002f-0000900000-1a87a9c1164f963f96462015-04-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Betulafolienetriol 20V, Positive-QTOFsplash10-00ou-2018900000-ddf6dab620a31407c0f92015-04-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Betulafolienetriol 40V, Positive-QTOFsplash10-014i-4429300000-5eb2f2adf06738c41b5e2015-04-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Betulafolienetriol 10V, Negative-QTOFsplash10-0a4i-0000900000-1d85361d5b6e65f360292015-04-25Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Betulafolienetriol 20V, Negative-QTOFsplash10-052f-0001900000-00ab80a687797db61b9f2015-04-25Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Betulafolienetriol 40V, Negative-QTOFsplash10-00nf-1109400000-572104a23946aba52db52015-04-25Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Betulafolienetriol 10V, Negative-QTOFsplash10-0a4i-0000900000-1d85361d5b6e65f360292015-04-25Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Betulafolienetriol 20V, Negative-QTOFsplash10-052f-0001900000-00ab80a687797db61b9f2015-04-25Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Betulafolienetriol 40V, Negative-QTOFsplash10-00nf-1109400000-572104a23946aba52db52015-04-25Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Betulafolienetriol 10V, Negative-QTOFsplash10-0a4i-0000900000-1d85361d5b6e65f360292015-04-25Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Betulafolienetriol 20V, Negative-QTOFsplash10-052f-0001900000-00ab80a687797db61b9f2015-04-25Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Betulafolienetriol 40V, Negative-QTOFsplash10-00nf-1109400000-572104a23946aba52db52015-04-25Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Betulafolienetriol 10V, Positive-QTOFsplash10-01r6-0104900000-5e50bfccc2e89570c3422021-09-23Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Betulafolienetriol 20V, Positive-QTOFsplash10-03di-8977200000-d5add23e11abf5e80ebe2021-09-23Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Betulafolienetriol 40V, Positive-QTOFsplash10-014i-9100000000-88255e567669bda562a32021-09-23Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Betulafolienetriol 10V, Negative-QTOFsplash10-0a4i-0000900000-3a7889e1c147f4c4662b2021-09-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Betulafolienetriol 20V, Negative-QTOFsplash10-0a4i-0000900000-19939855b0ed3232a3232021-09-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Betulafolienetriol 40V, Negative-QTOFsplash10-0a4i-0003900000-63c3a27ad3a67300c87f2021-09-24Wishart LabView Spectrum
Biological Properties
Cellular Locations
  • Extracellular
  • Membrane
Biospecimen LocationsNot Available
Tissue LocationsNot Available
Pathways
Normal Concentrations
Not Available
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDFDB014526
KNApSAcK IDC00021458
Chemspider IDNot Available
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound131751864
PDB IDNot Available
ChEBI IDNot Available
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDNot Available
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General References
  1. Simons K, Toomre D: Lipid rafts and signal transduction. Nat Rev Mol Cell Biol. 2000 Oct;1(1):31-9. [PubMed:11413487 ]
  2. Watson AD: Thematic review series: systems biology approaches to metabolic and cardiovascular disorders. Lipidomics: a global approach to lipid analysis in biological systems. J Lipid Res. 2006 Oct;47(10):2101-11. Epub 2006 Aug 10. [PubMed:16902246 ]
  3. Sethi JK, Vidal-Puig AJ: Thematic review series: adipocyte biology. Adipose tissue function and plasticity orchestrate nutritional adaptation. J Lipid Res. 2007 Jun;48(6):1253-62. Epub 2007 Mar 20. [PubMed:17374880 ]
  4. Lingwood D, Simons K: Lipid rafts as a membrane-organizing principle. Science. 2010 Jan 1;327(5961):46-50. doi: 10.1126/science.1174621. [PubMed:20044567 ]
  5. (). Yannai, Shmuel. (2004) Dictionary of food compounds with CD-ROM: Additives, flavors, and ingredients. Boca Raton: Chapman & Hall/CRC.. .
  6. Gunstone, Frank D., John L. Harwood, and Albert J. Dijkstra (2007). The lipid handbook with CD-ROM. CRC Press.