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Record Information
Version5.0
StatusExpected but not Quantified
Creation Date2012-09-11 21:02:07 UTC
Update Date2022-03-07 02:54:43 UTC
HMDB IDHMDB0035977
Secondary Accession Numbers
  • HMDB35977
Metabolite Identification
Common NameGanodermanontriol
DescriptionGanodermanontriol belongs to the class of organic compounds known as triterpenoids. These are terpene molecules containing six isoprene units. Ganodermanontriol is an extremely weak basic (essentially neutral) compound (based on its pKa).
Structure
Data?1563862801
Synonyms
ValueSource
24(S),25,26-Trihydroxy-5alpha-lanosta-7,9(11)-dien-3-oneHMDB
24,25,26-Trihydroxylanosta-7,9(11)-dien-3-oneHMDB
GNDT TriterpeneMeSH
GanodermanontriolMeSH
Chemical FormulaC30H48O4
Average Molecular Weight472.6997
Monoisotopic Molecular Weight472.355260024
IUPAC Name2,6,6,11,15-pentamethyl-14-(5,6,7-trihydroxy-6-methylheptan-2-yl)tetracyclo[8.7.0.0²,⁷.0¹¹,¹⁵]heptadeca-1(17),9-dien-5-one
Traditional Name2,6,6,11,15-pentamethyl-14-(5,6,7-trihydroxy-6-methylheptan-2-yl)tetracyclo[8.7.0.0²,⁷.0¹¹,¹⁵]heptadeca-1(17),9-dien-5-one
CAS Registry Number106518-63-2
SMILES
CC(CCC(O)C(C)(O)CO)C1CCC2(C)C3=CCC4C(C)(C)C(=O)CCC4(C)C3=CCC12C
InChI Identifier
InChI=1S/C30H48O4/c1-19(8-11-25(33)30(7,34)18-31)20-12-16-29(6)22-9-10-23-26(2,3)24(32)14-15-27(23,4)21(22)13-17-28(20,29)5/h9,13,19-20,23,25,31,33-34H,8,10-12,14-18H2,1-7H3
InChI KeyKASALCUNLBTNAA-UHFFFAOYSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as triterpenoids. These are terpene molecules containing six isoprene units.
KingdomOrganic compounds
Super ClassLipids and lipid-like molecules
ClassPrenol lipids
Sub ClassTriterpenoids
Direct ParentTriterpenoids
Alternative Parents
Substituents
  • Triterpenoid
  • 26-hydroxysteroid
  • 25-hydroxysteroid
  • Trihydroxy bile acid, alcohol, or derivatives
  • 24-hydroxysteroid
  • Hydroxy bile acid, alcohol, or derivatives
  • Cholane-skeleton
  • Bile acid, alcohol, or derivatives
  • 3-oxo-delta-7-steroid
  • 3-oxosteroid
  • Oxosteroid
  • Steroid
  • Delta-7-steroid
  • Fatty alcohol
  • Fatty acyl
  • Tertiary alcohol
  • Secondary alcohol
  • Ketone
  • Cyclic ketone
  • Polyol
  • Primary alcohol
  • Organic oxide
  • Hydrocarbon derivative
  • Carbonyl group
  • Organic oxygen compound
  • Organooxygen compound
  • Alcohol
  • Aliphatic homopolycyclic compound
Molecular FrameworkAliphatic homopolycyclic compounds
External DescriptorsNot Available
Ontology
Physiological effectNot Available
Disposition
Process
Role
Physical Properties
StateSolid
Experimental Molecular Properties
PropertyValueReference
Melting Point168 - 170 °CNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
Water Solubility0.0032 g/LALOGPS
logP6.22ALOGPS
logP4.72ChemAxon
logS-5.2ALOGPS
pKa (Strongest Acidic)13.19ChemAxon
pKa (Strongest Basic)-3.1ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count4ChemAxon
Hydrogen Donor Count3ChemAxon
Polar Surface Area77.76 ŲChemAxon
Rotatable Bond Count6ChemAxon
Refractivity138.73 m³·mol⁻¹ChemAxon
Polarizability56.14 ųChemAxon
Number of Rings4ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleYesChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DarkChem[M+H]+210.4431661259
DarkChem[M-H]-207.07531661259
DeepCCS[M-2H]-245.42530932474
DeepCCS[M+Na]+220.65330932474
AllCCS[M+H]+217.432859911
AllCCS[M+H-H2O]+215.732859911
AllCCS[M+NH4]+218.932859911
AllCCS[M+Na]+219.432859911
AllCCS[M-H]-215.232859911
AllCCS[M+Na-2H]-217.832859911
AllCCS[M+HCOO]-220.932859911

Predicted Kovats Retention Indices

Underivatized

MetaboliteSMILESKovats RI ValueColumn TypeReference
GanodermanontriolCC(CCC(O)C(C)(O)CO)C1CCC2(C)C3=CCC4C(C)(C)C(=O)CCC4(C)C3=CCC12C4309.6Standard polar33892256
GanodermanontriolCC(CCC(O)C(C)(O)CO)C1CCC2(C)C3=CCC4C(C)(C)C(=O)CCC4(C)C3=CCC12C3732.9Standard non polar33892256
GanodermanontriolCC(CCC(O)C(C)(O)CO)C1CCC2(C)C3=CCC4C(C)(C)C(=O)CCC4(C)C3=CCC12C3970.5Semi standard non polar33892256

Derivatized

Derivative Name / StructureSMILESKovats RI ValueColumn TypeReference
Ganodermanontriol,1TMS,isomer #1CC(CCC(O[Si](C)(C)C)C(C)(O)CO)C1CCC2(C)C3=CCC4C(C)(C)C(=O)CCC4(C)C3=CCC12C3883.3Semi standard non polar33892256
Ganodermanontriol,1TMS,isomer #2CC(CCC(O)C(C)(CO)O[Si](C)(C)C)C1CCC2(C)C3=CCC4C(C)(C)C(=O)CCC4(C)C3=CCC12C3897.2Semi standard non polar33892256
Ganodermanontriol,1TMS,isomer #3CC(CCC(O)C(C)(O)CO[Si](C)(C)C)C1CCC2(C)C3=CCC4C(C)(C)C(=O)CCC4(C)C3=CCC12C3881.1Semi standard non polar33892256
Ganodermanontriol,1TMS,isomer #4CC(CCC(O)C(C)(O)CO)C1CCC2(C)C3=CCC4C(C)(C)C(O[Si](C)(C)C)=CCC4(C)C3=CCC12C3841.2Semi standard non polar33892256
Ganodermanontriol,2TMS,isomer #1CC(CCC(O[Si](C)(C)C)C(C)(CO)O[Si](C)(C)C)C1CCC2(C)C3=CCC4C(C)(C)C(=O)CCC4(C)C3=CCC12C3856.1Semi standard non polar33892256
Ganodermanontriol,2TMS,isomer #2CC(CCC(O[Si](C)(C)C)C(C)(O)CO[Si](C)(C)C)C1CCC2(C)C3=CCC4C(C)(C)C(=O)CCC4(C)C3=CCC12C3843.9Semi standard non polar33892256
Ganodermanontriol,2TMS,isomer #3CC(CCC(O[Si](C)(C)C)C(C)(O)CO)C1CCC2(C)C3=CCC4C(C)(C)C(O[Si](C)(C)C)=CCC4(C)C3=CCC12C3761.9Semi standard non polar33892256
Ganodermanontriol,2TMS,isomer #4CC(CCC(O)C(C)(CO[Si](C)(C)C)O[Si](C)(C)C)C1CCC2(C)C3=CCC4C(C)(C)C(=O)CCC4(C)C3=CCC12C3875.5Semi standard non polar33892256
Ganodermanontriol,2TMS,isomer #5CC(CCC(O)C(C)(CO)O[Si](C)(C)C)C1CCC2(C)C3=CCC4C(C)(C)C(O[Si](C)(C)C)=CCC4(C)C3=CCC12C3761.4Semi standard non polar33892256
Ganodermanontriol,2TMS,isomer #6CC(CCC(O)C(C)(O)CO[Si](C)(C)C)C1CCC2(C)C3=CCC4C(C)(C)C(O[Si](C)(C)C)=CCC4(C)C3=CCC12C3744.9Semi standard non polar33892256
Ganodermanontriol,3TMS,isomer #1CC(CCC(O[Si](C)(C)C)C(C)(CO[Si](C)(C)C)O[Si](C)(C)C)C1CCC2(C)C3=CCC4C(C)(C)C(=O)CCC4(C)C3=CCC12C3890.8Semi standard non polar33892256
Ganodermanontriol,3TMS,isomer #2CC(CCC(O[Si](C)(C)C)C(C)(CO)O[Si](C)(C)C)C1CCC2(C)C3=CCC4C(C)(C)C(O[Si](C)(C)C)=CCC4(C)C3=CCC12C3729.0Semi standard non polar33892256
Ganodermanontriol,3TMS,isomer #3CC(CCC(O[Si](C)(C)C)C(C)(O)CO[Si](C)(C)C)C1CCC2(C)C3=CCC4C(C)(C)C(O[Si](C)(C)C)=CCC4(C)C3=CCC12C3710.3Semi standard non polar33892256
Ganodermanontriol,3TMS,isomer #4CC(CCC(O)C(C)(CO[Si](C)(C)C)O[Si](C)(C)C)C1CCC2(C)C3=CCC4C(C)(C)C(O[Si](C)(C)C)=CCC4(C)C3=CCC12C3758.0Semi standard non polar33892256
Ganodermanontriol,4TMS,isomer #1CC(CCC(O[Si](C)(C)C)C(C)(CO[Si](C)(C)C)O[Si](C)(C)C)C1CCC2(C)C3=CCC4C(C)(C)C(O[Si](C)(C)C)=CCC4(C)C3=CCC12C3764.2Semi standard non polar33892256
Ganodermanontriol,4TMS,isomer #1CC(CCC(O[Si](C)(C)C)C(C)(CO[Si](C)(C)C)O[Si](C)(C)C)C1CCC2(C)C3=CCC4C(C)(C)C(O[Si](C)(C)C)=CCC4(C)C3=CCC12C3702.1Standard non polar33892256
Ganodermanontriol,1TBDMS,isomer #1CC(CCC(O[Si](C)(C)C(C)(C)C)C(C)(O)CO)C1CCC2(C)C3=CCC4C(C)(C)C(=O)CCC4(C)C3=CCC12C4113.4Semi standard non polar33892256
Ganodermanontriol,1TBDMS,isomer #2CC(CCC(O)C(C)(CO)O[Si](C)(C)C(C)(C)C)C1CCC2(C)C3=CCC4C(C)(C)C(=O)CCC4(C)C3=CCC12C4117.4Semi standard non polar33892256
Ganodermanontriol,1TBDMS,isomer #3CC(CCC(O)C(C)(O)CO[Si](C)(C)C(C)(C)C)C1CCC2(C)C3=CCC4C(C)(C)C(=O)CCC4(C)C3=CCC12C4103.2Semi standard non polar33892256
Ganodermanontriol,1TBDMS,isomer #4CC(CCC(O)C(C)(O)CO)C1CCC2(C)C3=CCC4C(C)(C)C(O[Si](C)(C)C(C)(C)C)=CCC4(C)C3=CCC12C4056.9Semi standard non polar33892256
Ganodermanontriol,2TBDMS,isomer #1CC(CCC(O[Si](C)(C)C(C)(C)C)C(C)(CO)O[Si](C)(C)C(C)(C)C)C1CCC2(C)C3=CCC4C(C)(C)C(=O)CCC4(C)C3=CCC12C4335.0Semi standard non polar33892256
Ganodermanontriol,2TBDMS,isomer #2CC(CCC(O[Si](C)(C)C(C)(C)C)C(C)(O)CO[Si](C)(C)C(C)(C)C)C1CCC2(C)C3=CCC4C(C)(C)C(=O)CCC4(C)C3=CCC12C4323.5Semi standard non polar33892256
Ganodermanontriol,2TBDMS,isomer #3CC(CCC(O[Si](C)(C)C(C)(C)C)C(C)(O)CO)C1CCC2(C)C3=CCC4C(C)(C)C(O[Si](C)(C)C(C)(C)C)=CCC4(C)C3=CCC12C4213.7Semi standard non polar33892256
Ganodermanontriol,2TBDMS,isomer #4CC(CCC(O)C(C)(CO[Si](C)(C)C(C)(C)C)O[Si](C)(C)C(C)(C)C)C1CCC2(C)C3=CCC4C(C)(C)C(=O)CCC4(C)C3=CCC12C4343.0Semi standard non polar33892256
Ganodermanontriol,2TBDMS,isomer #5CC(CCC(O)C(C)(CO)O[Si](C)(C)C(C)(C)C)C1CCC2(C)C3=CCC4C(C)(C)C(O[Si](C)(C)C(C)(C)C)=CCC4(C)C3=CCC12C4206.6Semi standard non polar33892256
Ganodermanontriol,2TBDMS,isomer #6CC(CCC(O)C(C)(O)CO[Si](C)(C)C(C)(C)C)C1CCC2(C)C3=CCC4C(C)(C)C(O[Si](C)(C)C(C)(C)C)=CCC4(C)C3=CCC12C4193.6Semi standard non polar33892256
Ganodermanontriol,3TBDMS,isomer #1CC(CCC(O[Si](C)(C)C(C)(C)C)C(C)(CO[Si](C)(C)C(C)(C)C)O[Si](C)(C)C(C)(C)C)C1CCC2(C)C3=CCC4C(C)(C)C(=O)CCC4(C)C3=CCC12C4577.3Semi standard non polar33892256
Ganodermanontriol,3TBDMS,isomer #2CC(CCC(O[Si](C)(C)C(C)(C)C)C(C)(CO)O[Si](C)(C)C(C)(C)C)C1CCC2(C)C3=CCC4C(C)(C)C(O[Si](C)(C)C(C)(C)C)=CCC4(C)C3=CCC12C4412.3Semi standard non polar33892256
Ganodermanontriol,3TBDMS,isomer #3CC(CCC(O[Si](C)(C)C(C)(C)C)C(C)(O)CO[Si](C)(C)C(C)(C)C)C1CCC2(C)C3=CCC4C(C)(C)C(O[Si](C)(C)C(C)(C)C)=CCC4(C)C3=CCC12C4374.3Semi standard non polar33892256
Ganodermanontriol,3TBDMS,isomer #4CC(CCC(O)C(C)(CO[Si](C)(C)C(C)(C)C)O[Si](C)(C)C(C)(C)C)C1CCC2(C)C3=CCC4C(C)(C)C(O[Si](C)(C)C(C)(C)C)=CCC4(C)C3=CCC12C4437.5Semi standard non polar33892256
Spectra

GC-MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted GC-MSPredicted GC-MS Spectrum - Ganodermanontriol GC-MS (Non-derivatized) - 70eV, Positivesplash10-0a6u-6005900000-69446f324bcf491ad8d32017-09-01Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Ganodermanontriol GC-MS (3 TMS) - 70eV, Positivesplash10-00di-1021129000-b72e474cb72ef9c40a4f2017-10-06Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Ganodermanontriol GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Ganodermanontriol GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Ganodermanontriol 10V, Positive-QTOFsplash10-05fr-0001900000-c747816c847779d411dd2016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Ganodermanontriol 20V, Positive-QTOFsplash10-0a4r-4107900000-800d3235b568b3bb9dea2016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Ganodermanontriol 40V, Positive-QTOFsplash10-056r-9038600000-e74d41091ca3c8d0564e2016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Ganodermanontriol 10V, Negative-QTOFsplash10-00di-1000900000-f21f09593b16ac47afa22016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Ganodermanontriol 20V, Negative-QTOFsplash10-00di-4003900000-894b4d4c46f99d61ff032016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Ganodermanontriol 40V, Negative-QTOFsplash10-00fr-9102300000-21bfeb0ac1490302bf732016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Ganodermanontriol 10V, Positive-QTOFsplash10-000f-0601900000-049d38231df599f962892021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Ganodermanontriol 20V, Positive-QTOFsplash10-000i-9727800000-ba7a6d49d6144800dd902021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Ganodermanontriol 40V, Positive-QTOFsplash10-0gvy-8269000000-e53fa94bc561e8782a5a2021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Ganodermanontriol 10V, Negative-QTOFsplash10-00di-0000900000-2a929ec71135ea4b79472021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Ganodermanontriol 20V, Negative-QTOFsplash10-0fk9-2002900000-a627fc2ad1638e74fe4c2021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Ganodermanontriol 40V, Negative-QTOFsplash10-014r-4007900000-43663594da2b619c1fb32021-09-22Wishart LabView Spectrum
Biological Properties
Cellular Locations
  • Extracellular
Biospecimen LocationsNot Available
Tissue LocationsNot Available
Pathways
Normal Concentrations
Not Available
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDFDB014781
KNApSAcK IDC00023867
Chemspider IDNot Available
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkGanodermanontriol
METLIN IDNot Available
PubChem Compound75596326
PDB IDNot Available
ChEBI IDNot Available
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDNot Available
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General References
  1. Simons K, Toomre D: Lipid rafts and signal transduction. Nat Rev Mol Cell Biol. 2000 Oct;1(1):31-9. [PubMed:11413487 ]
  2. Watson AD: Thematic review series: systems biology approaches to metabolic and cardiovascular disorders. Lipidomics: a global approach to lipid analysis in biological systems. J Lipid Res. 2006 Oct;47(10):2101-11. Epub 2006 Aug 10. [PubMed:16902246 ]
  3. Sethi JK, Vidal-Puig AJ: Thematic review series: adipocyte biology. Adipose tissue function and plasticity orchestrate nutritional adaptation. J Lipid Res. 2007 Jun;48(6):1253-62. Epub 2007 Mar 20. [PubMed:17374880 ]
  4. Lingwood D, Simons K: Lipid rafts as a membrane-organizing principle. Science. 2010 Jan 1;327(5961):46-50. doi: 10.1126/science.1174621. [PubMed:20044567 ]
  5. (). Yannai, Shmuel. (2004) Dictionary of food compounds with CD-ROM: Additives, flavors, and ingredients. Boca Raton: Chapman & Hall/CRC.. .
  6. Gunstone, Frank D., John L. Harwood, and Albert J. Dijkstra (2007). The lipid handbook with CD-ROM. CRC Press.