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Record Information

Version

5.0

Status

Expected but not Quantified

Creation Date

2012-09-11 21:43:36 UTC

Update Date

2022-03-07 02:54:57 UTC

HMDB ID

HMDB0036568

Secondary Accession Numbers

HMDB36568

Metabolite Identification

Common Name

Persenone A

Description

Persenone A belongs to the class of organic compounds known as long-chain fatty alcohols. These are fatty alcohols that have an aliphatic tail of 13 to 21 carbon atoms. Thus, persenone a is considered to be a fatty alcohol. Based on a literature review a significant number of articles have been published on Persenone A.

Structure

MOL 3D MOL SDF 3D SDF PDB 3D PDB SMILES InChI


  Mrv0541 02241212062D          

 27 26  0  0  0  0            999 V2000
   -8.3309   -0.2042    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -7.6170    0.2070    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.9032   -0.2042    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.1893    0.2070    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.4754   -0.2042    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.7616    0.2070    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.9364    0.2070    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.2211   -0.2042    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5059    0.2070    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6808    0.2070    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9654   -0.2042    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2502    0.2070    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.4649   -0.2042    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.1800    0.2070    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.8953   -0.2042    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.6105    0.2070    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.3257   -0.2042    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.0409    0.2070    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.7561   -0.2042    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.0409    1.0322    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.4713    0.2070    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.1866   -0.2042    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.4713    1.0322    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    6.9018    0.2070    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    7.6156   -0.2070    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.3309    0.2042    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.6142   -1.0322    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  1  0  0  0  0
  3  4  1  0  0  0  0
  4  5  1  0  0  0  0
  5  6  1  0  0  0  0
  6  7  2  0  0  0  0
  7  8  1  0  0  0  0
  8  9  1  0  0  0  0
  9 10  2  0  0  0  0
 10 11  1  0  0  0  0
 11 12  1  0  0  0  0
 12 13  1  0  0  0  0
 13 14  1  0  0  0  0
 14 15  1  0  0  0  0
 15 16  1  0  0  0  0
 16 17  2  0  0  0  0
 17 18  1  0  0  0  0
 18 19  1  0  0  0  0
 18 20  2  0  0  0  0
 19 21  1  0  0  0  0
 21 22  1  0  0  0  0
 21 23  1  0  0  0  0
 22 24  1  0  0  0  0
 24 25  1  0  0  0  0
 25 26  1  0  0  0  0
 25 27  2  0  0  0  0
M  END

HMDB0036568
     RDKit          3D
Persenone A
 65 64  0  0  0  0  0  0  0  0999 V2000
   -8.7820    1.1095    0.0668 C   0  0  0  0  0  0  0  0  0  0  0  0
   -7.5394    1.7425   -0.5532 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.6298    2.2018    0.5164 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.1757    1.1311    1.4253 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.3316    0.0232    0.9229 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.8849   -0.8063   -0.1129 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.3119   -0.9774   -1.2747 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.0332   -0.3737   -1.7316 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0659   -1.4311   -2.0511 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9199   -1.5776   -1.4689 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4568   -0.6840   -0.4060 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2005   -1.4663    0.8896 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1590   -2.5243    0.6760 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.1658   -1.9745    0.2317 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.7452   -1.0040    1.2434 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.0415   -0.5045    0.7502 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.2075    0.7770    0.5466 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.4758    1.3092    0.0591 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.5703    2.5524   -0.1182 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.6446    0.4725   -0.2346 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.5281    0.4387    1.0172 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.9266    1.7101    1.3119 O   0  0  0  0  0  0  0  0  0  0  0  0
    7.6708   -0.4944    0.8483 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.5582   -0.1653   -0.1608 O   0  0  0  0  0  0  0  0  0  0  0  0
    9.3836    0.9223   -0.2665 C   0  0  0  0  0  0  0  0  0  0  0  0
   10.2819    1.1416   -1.4336 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.3938    1.7754    0.6487 O   0  0  0  0  0  0  0  0  0  0  0  0
   -8.8283    1.4362    1.1102 H   0  0  0  0  0  0  0  0  0  0  0  0
   -8.7964    0.0117   -0.0222 H   0  0  0  0  0  0  0  0  0  0  0  0
   -9.6564    1.4628   -0.5310 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.8614    2.5984   -1.2280 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.0807    1.0326   -1.2219 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.7104    2.6210    0.0124 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.0861    3.0149    1.1477 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.1125    0.7011    1.9247 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.6851    1.6566    2.3045 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.1512   -0.6589    1.8228 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.3293    0.4682    0.6751 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.8290   -1.3237    0.0779 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.8121   -1.6330   -2.0021 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.3125    0.0669   -2.7600 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.6829    0.4834   -1.1835 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.3294   -2.1555   -2.8448 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2116   -2.3896   -1.7355 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4556   -0.2873   -0.7455 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0899    0.1441   -0.1239 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9279   -0.7560    1.6788 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1239   -1.9784    1.2237 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.0383   -3.0913    1.6190 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4893   -3.2879   -0.0551 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.1762   -1.4912   -0.7443 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.8538   -2.8655    0.1555 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.0561   -0.1497    1.3838 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.8276   -1.4877    2.2529 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.8350   -1.2181    0.5661 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.3905    1.4304    0.7455 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.4420   -0.5645   -0.4939 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.2937    0.9846   -1.0049 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.8444    0.0688    1.8552 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.7442    2.3018    0.5466 H   0  0  0  0  0  0  0  0  0  0  0  0
    8.2278   -0.5443    1.8358 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.2923   -1.5380    0.7199 H   0  0  0  0  0  0  0  0  0  0  0  0
    9.6744    1.0336   -2.3561 H   0  0  0  0  0  0  0  0  0  0  0  0
   10.6591    2.1827   -1.4397 H   0  0  0  0  0  0  0  0  0  0  0  0
   11.1034    0.3972   -1.4551 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  1  0
  3  4  1  0
  4  5  1  0
  5  6  1  0
  6  7  2  0
  7  8  1  0
  8  9  1  0
  9 10  2  0
 10 11  1  0
 11 12  1  0
 12 13  1  0
 13 14  1  0
 14 15  1  0
 15 16  1  0
 16 17  2  0
 17 18  1  0
 18 19  2  0
 18 20  1  0
 20 21  1  0
 21 22  1  0
 21 23  1  0
 23 24  1  0
 24 25  1  0
 25 26  1  0
 25 27  2  0
  1 28  1  0
  1 29  1  0
  1 30  1  0
  2 31  1  0
  2 32  1  0
  3 33  1  0
  3 34  1  0
  4 35  1  0
  4 36  1  0
  5 37  1  0
  5 38  1  0
  6 39  1  0
  7 40  1  0
  8 41  1  0
  8 42  1  0
  9 43  1  0
 10 44  1  0
 11 45  1  0
 11 46  1  0
 12 47  1  0
 12 48  1  0
 13 49  1  0
 13 50  1  0
 14 51  1  0
 14 52  1  0
 15 53  1  0
 15 54  1  0
 16 55  1  0
 17 56  1  0
 20 57  1  0
 20 58  1  0
 21 59  1  0
 22 60  1  0
 23 61  1  0
 23 62  1  0
 26 63  1  0
 26 64  1  0
 26 65  1  0
M  END


  Mrv0541 02241212062D          

 27 26  0  0  0  0            999 V2000
   -8.3309   -0.2042    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -7.6170    0.2070    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.9032   -0.2042    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.1893    0.2070    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.4754   -0.2042    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.7616    0.2070    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.9364    0.2070    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.2211   -0.2042    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5059    0.2070    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6808    0.2070    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9654   -0.2042    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2502    0.2070    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.4649   -0.2042    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.1800    0.2070    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.8953   -0.2042    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.6105    0.2070    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.3257   -0.2042    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.0409    0.2070    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.7561   -0.2042    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.0409    1.0322    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.4713    0.2070    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.1866   -0.2042    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.4713    1.0322    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    6.9018    0.2070    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    7.6156   -0.2070    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.3309    0.2042    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.6142   -1.0322    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  1  0  0  0  0
  3  4  1  0  0  0  0
  4  5  1  0  0  0  0
  5  6  1  0  0  0  0
  6  7  2  0  0  0  0
  7  8  1  0  0  0  0
  8  9  1  0  0  0  0
  9 10  2  0  0  0  0
 10 11  1  0  0  0  0
 11 12  1  0  0  0  0
 12 13  1  0  0  0  0
 13 14  1  0  0  0  0
 14 15  1  0  0  0  0
 15 16  1  0  0  0  0
 16 17  2  0  0  0  0
 17 18  1  0  0  0  0
 18 19  1  0  0  0  0
 18 20  2  0  0  0  0
 19 21  1  0  0  0  0
 21 22  1  0  0  0  0
 21 23  1  0  0  0  0
 22 24  1  0  0  0  0
 24 25  1  0  0  0  0
 25 26  1  0  0  0  0
 25 27  2  0  0  0  0
M  END
> <DATABASE_ID>
HMDB0036568

> <DATABASE_NAME>
hmdb

> <SMILES>
CCCCC\C=C/C\C=C/CCCCC\C=C\C(=O)CC(O)COC(C)=O

> <INCHI_IDENTIFIER>
InChI=1S/C23H38O4/c1-3-4-5-6-7-8-9-10-11-12-13-14-15-16-17-18-22(25)19-23(26)20-27-21(2)24/h7-8,10-11,17-18,23,26H,3-6,9,12-16,19-20H2,1-2H3/b8-7-,11-10-,18-17+

> <INCHI_KEY>
YLWJMUPPJKELEC-GQQAEKEGSA-N

> <FORMULA>
C23H38O4

> <MOLECULAR_WEIGHT>
378.5454

> <EXACT_MASS>
378.277009704

> <JCHEM_ACCEPTOR_COUNT>
3

> <JCHEM_AVERAGE_POLARIZABILITY>
45.512510303263284

> <JCHEM_BIOAVAILABILITY>
0

> <JCHEM_DONOR_COUNT>
1

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
0

> <JCHEM_IUPAC>
(5E,12Z,15Z)-2-hydroxy-4-oxohenicosa-5,12,15-trien-1-yl acetate

> <ALOGPS_LOGP>
6.04

> <JCHEM_LOGP>
5.979880965333335

> <ALOGPS_LOGS>
-6.12

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
0

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA>
16.967565454654192

> <JCHEM_PKA_STRONGEST_ACIDIC>
14.246538581306584

> <JCHEM_PKA_STRONGEST_BASIC>
-3.1247225451344747

> <JCHEM_POLAR_SURFACE_AREA>
63.6

> <JCHEM_REFRACTIVITY>
114.67879999999997

> <JCHEM_ROTATABLE_BOND_COUNT>
18

> <JCHEM_RULE_OF_FIVE>
0

> <ALOGPS_SOLUBILITY>
2.88e-04 g/l

> <JCHEM_TRADITIONAL_IUPAC>
(5E,12Z,15Z)-2-hydroxy-4-oxohenicosa-5,12,15-trien-1-yl acetate

> <JCHEM_VEBER_RULE>
0

$$$$

HMDB0036568
     RDKit          3D
Persenone A
 65 64  0  0  0  0  0  0  0  0999 V2000
   -8.7820    1.1095    0.0668 C   0  0  0  0  0  0  0  0  0  0  0  0
   -7.5394    1.7425   -0.5532 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.6298    2.2018    0.5164 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.1757    1.1311    1.4253 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.3316    0.0232    0.9229 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.8849   -0.8063   -0.1129 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.3119   -0.9774   -1.2747 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.0332   -0.3737   -1.7316 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0659   -1.4311   -2.0511 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9199   -1.5776   -1.4689 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4568   -0.6840   -0.4060 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2005   -1.4663    0.8896 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1590   -2.5243    0.6760 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.1658   -1.9745    0.2317 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.7452   -1.0040    1.2434 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.0415   -0.5045    0.7502 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.2075    0.7770    0.5466 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.4758    1.3092    0.0591 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.5703    2.5524   -0.1182 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.6446    0.4725   -0.2346 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.5281    0.4387    1.0172 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.9266    1.7101    1.3119 O   0  0  0  0  0  0  0  0  0  0  0  0
    7.6708   -0.4944    0.8483 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.5582   -0.1653   -0.1608 O   0  0  0  0  0  0  0  0  0  0  0  0
    9.3836    0.9223   -0.2665 C   0  0  0  0  0  0  0  0  0  0  0  0
   10.2819    1.1416   -1.4336 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.3938    1.7754    0.6487 O   0  0  0  0  0  0  0  0  0  0  0  0
   -8.8283    1.4362    1.1102 H   0  0  0  0  0  0  0  0  0  0  0  0
   -8.7964    0.0117   -0.0222 H   0  0  0  0  0  0  0  0  0  0  0  0
   -9.6564    1.4628   -0.5310 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.8614    2.5984   -1.2280 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.0807    1.0326   -1.2219 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.7104    2.6210    0.0124 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.0861    3.0149    1.1477 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.1125    0.7011    1.9247 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.6851    1.6566    2.3045 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.1512   -0.6589    1.8228 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.3293    0.4682    0.6751 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.8290   -1.3237    0.0779 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.8121   -1.6330   -2.0021 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.3125    0.0669   -2.7600 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.6829    0.4834   -1.1835 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.3294   -2.1555   -2.8448 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2116   -2.3896   -1.7355 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4556   -0.2873   -0.7455 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0899    0.1441   -0.1239 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9279   -0.7560    1.6788 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1239   -1.9784    1.2237 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.0383   -3.0913    1.6190 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4893   -3.2879   -0.0551 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.1762   -1.4912   -0.7443 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.8538   -2.8655    0.1555 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.0561   -0.1497    1.3838 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.8276   -1.4877    2.2529 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.8350   -1.2181    0.5661 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.3905    1.4304    0.7455 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.4420   -0.5645   -0.4939 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.2937    0.9846   -1.0049 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.8444    0.0688    1.8552 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.7442    2.3018    0.5466 H   0  0  0  0  0  0  0  0  0  0  0  0
    8.2278   -0.5443    1.8358 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.2923   -1.5380    0.7199 H   0  0  0  0  0  0  0  0  0  0  0  0
    9.6744    1.0336   -2.3561 H   0  0  0  0  0  0  0  0  0  0  0  0
   10.6591    2.1827   -1.4397 H   0  0  0  0  0  0  0  0  0  0  0  0
   11.1034    0.3972   -1.4551 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  1  0
  3  4  1  0
  4  5  1  0
  5  6  1  0
  6  7  2  0
  7  8  1  0
  8  9  1  0
  9 10  2  0
 10 11  1  0
 11 12  1  0
 12 13  1  0
 13 14  1  0
 14 15  1  0
 15 16  1  0
 16 17  2  0
 17 18  1  0
 18 19  2  0
 18 20  1  0
 20 21  1  0
 21 22  1  0
 21 23  1  0
 23 24  1  0
 24 25  1  0
 25 26  1  0
 25 27  2  0
  1 28  1  0
  1 29  1  0
  1 30  1  0
  2 31  1  0
  2 32  1  0
  3 33  1  0
  3 34  1  0
  4 35  1  0
  4 36  1  0
  5 37  1  0
  5 38  1  0
  6 39  1  0
  7 40  1  0
  8 41  1  0
  8 42  1  0
  9 43  1  0
 10 44  1  0
 11 45  1  0
 11 46  1  0
 12 47  1  0
 12 48  1  0
 13 49  1  0
 13 50  1  0
 14 51  1  0
 14 52  1  0
 15 53  1  0
 15 54  1  0
 16 55  1  0
 17 56  1  0
 20 57  1  0
 20 58  1  0
 21 59  1  0
 22 60  1  0
 23 61  1  0
 23 62  1  0
 26 63  1  0
 26 64  1  0
 26 65  1  0
M  END

HEADER    PROTEIN                                 24-FEB-12   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   24-FEB-12         0                                  
HETATM    1  C   UNK     0     -15.551  -0.381   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0     -14.218   0.386   0.000  0.00  0.00           C+0
HETATM    3  C   UNK     0     -12.886  -0.381   0.000  0.00  0.00           C+0
HETATM    4  C   UNK     0     -11.553   0.386   0.000  0.00  0.00           C+0
HETATM    5  C   UNK     0     -10.221  -0.381   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0      -8.888   0.386   0.000  0.00  0.00           C+0
HETATM    7  C   UNK     0      -7.348   0.386   0.000  0.00  0.00           C+0
HETATM    8  C   UNK     0      -6.013  -0.381   0.000  0.00  0.00           C+0
HETATM    9  C   UNK     0      -4.678   0.386   0.000  0.00  0.00           C+0
HETATM   10  C   UNK     0      -3.137   0.386   0.000  0.00  0.00           C+0
HETATM   11  C   UNK     0      -1.802  -0.381   0.000  0.00  0.00           C+0
HETATM   12  C   UNK     0      -0.467   0.386   0.000  0.00  0.00           C+0
HETATM   13  C   UNK     0       0.868  -0.381   0.000  0.00  0.00           C+0
HETATM   14  C   UNK     0       2.203   0.386   0.000  0.00  0.00           C+0
HETATM   15  C   UNK     0       3.538  -0.381   0.000  0.00  0.00           C+0
HETATM   16  C   UNK     0       4.873   0.386   0.000  0.00  0.00           C+0
HETATM   17  C   UNK     0       6.208  -0.381   0.000  0.00  0.00           C+0
HETATM   18  C   UNK     0       7.543   0.386   0.000  0.00  0.00           C+0
HETATM   19  C   UNK     0       8.878  -0.381   0.000  0.00  0.00           C+0
HETATM   20  O   UNK     0       7.543   1.927   0.000  0.00  0.00           O+0
HETATM   21  C   UNK     0      10.213   0.386   0.000  0.00  0.00           C+0
HETATM   22  C   UNK     0      11.548  -0.381   0.000  0.00  0.00           C+0
HETATM   23  O   UNK     0      10.213   1.927   0.000  0.00  0.00           O+0
HETATM   24  O   UNK     0      12.883   0.386   0.000  0.00  0.00           O+0
HETATM   25  C   UNK     0      14.216  -0.386   0.000  0.00  0.00           C+0
HETATM   26  C   UNK     0      15.551   0.381   0.000  0.00  0.00           C+0
HETATM   27  O   UNK     0      14.213  -1.927   0.000  0.00  0.00           O+0
CONECT    1    2                                                            
CONECT    2    1    3                                                       
CONECT    3    2    4                                                       
CONECT    4    3    5                                                       
CONECT    5    4    6                                                       
CONECT    6    5    7                                                       
CONECT    7    6    8                                                       
CONECT    8    7    9                                                       
CONECT    9    8   10                                                       
CONECT   10    9   11                                                       
CONECT   11   10   12                                                       
CONECT   12   11   13                                                       
CONECT   13   12   14                                                       
CONECT   14   13   15                                                       
CONECT   15   14   16                                                       
CONECT   16   15   17                                                       
CONECT   17   16   18                                                       
CONECT   18   17   19   20                                                  
CONECT   19   18   21                                                       
CONECT   20   18                                                            
CONECT   21   19   22   23                                                  
CONECT   22   21   24                                                       
CONECT   23   21                                                            
CONECT   24   22   25                                                       
CONECT   25   24   26   27                                                  
CONECT   26   25                                                            
CONECT   27   25                                                            
MASTER        0    0    0    0    0    0    0    0   27    0   52    0
END

COMPND    HMDB0036568
HETATM    1  C1  UNL     1      -8.782   1.110   0.067  1.00  0.00           C  
HETATM    2  C2  UNL     1      -7.539   1.742  -0.553  1.00  0.00           C  
HETATM    3  C3  UNL     1      -6.630   2.202   0.516  1.00  0.00           C  
HETATM    4  C4  UNL     1      -6.176   1.131   1.425  1.00  0.00           C  
HETATM    5  C5  UNL     1      -5.332   0.023   0.923  1.00  0.00           C  
HETATM    6  C6  UNL     1      -5.885  -0.806  -0.113  1.00  0.00           C  
HETATM    7  C7  UNL     1      -5.312  -0.977  -1.275  1.00  0.00           C  
HETATM    8  C8  UNL     1      -4.033  -0.374  -1.732  1.00  0.00           C  
HETATM    9  C9  UNL     1      -3.066  -1.431  -2.051  1.00  0.00           C  
HETATM   10  C10 UNL     1      -1.920  -1.578  -1.469  1.00  0.00           C  
HETATM   11  C11 UNL     1      -1.457  -0.684  -0.406  1.00  0.00           C  
HETATM   12  C12 UNL     1      -1.200  -1.466   0.890  1.00  0.00           C  
HETATM   13  C13 UNL     1      -0.159  -2.524   0.676  1.00  0.00           C  
HETATM   14  C14 UNL     1       1.166  -1.975   0.232  1.00  0.00           C  
HETATM   15  C15 UNL     1       1.745  -1.004   1.243  1.00  0.00           C  
HETATM   16  C16 UNL     1       3.041  -0.504   0.750  1.00  0.00           C  
HETATM   17  C17 UNL     1       3.208   0.777   0.547  1.00  0.00           C  
HETATM   18  C18 UNL     1       4.476   1.309   0.059  1.00  0.00           C  
HETATM   19  O1  UNL     1       4.570   2.552  -0.118  1.00  0.00           O  
HETATM   20  C19 UNL     1       5.645   0.472  -0.235  1.00  0.00           C  
HETATM   21  C20 UNL     1       6.528   0.439   1.017  1.00  0.00           C  
HETATM   22  O2  UNL     1       6.927   1.710   1.312  1.00  0.00           O  
HETATM   23  C21 UNL     1       7.671  -0.494   0.848  1.00  0.00           C  
HETATM   24  O3  UNL     1       8.558  -0.165  -0.161  1.00  0.00           O  
HETATM   25  C22 UNL     1       9.384   0.922  -0.266  1.00  0.00           C  
HETATM   26  C23 UNL     1      10.282   1.142  -1.434  1.00  0.00           C  
HETATM   27  O4  UNL     1       9.394   1.775   0.649  1.00  0.00           O  
HETATM   28  H1  UNL     1      -8.828   1.436   1.110  1.00  0.00           H  
HETATM   29  H2  UNL     1      -8.796   0.012  -0.022  1.00  0.00           H  
HETATM   30  H3  UNL     1      -9.656   1.463  -0.531  1.00  0.00           H  
HETATM   31  H4  UNL     1      -7.861   2.598  -1.228  1.00  0.00           H  
HETATM   32  H5  UNL     1      -7.081   1.033  -1.222  1.00  0.00           H  
HETATM   33  H6  UNL     1      -5.710   2.621   0.012  1.00  0.00           H  
HETATM   34  H7  UNL     1      -7.086   3.015   1.148  1.00  0.00           H  
HETATM   35  H8  UNL     1      -7.113   0.701   1.925  1.00  0.00           H  
HETATM   36  H9  UNL     1      -5.685   1.657   2.304  1.00  0.00           H  
HETATM   37  H10 UNL     1      -5.151  -0.659   1.823  1.00  0.00           H  
HETATM   38  H11 UNL     1      -4.329   0.468   0.675  1.00  0.00           H  
HETATM   39  H12 UNL     1      -6.829  -1.324   0.078  1.00  0.00           H  
HETATM   40  H13 UNL     1      -5.812  -1.633  -2.002  1.00  0.00           H  
HETATM   41  H14 UNL     1      -4.312   0.067  -2.760  1.00  0.00           H  
HETATM   42  H15 UNL     1      -3.683   0.483  -1.183  1.00  0.00           H  
HETATM   43  H16 UNL     1      -3.329  -2.155  -2.845  1.00  0.00           H  
HETATM   44  H17 UNL     1      -1.212  -2.390  -1.735  1.00  0.00           H  
HETATM   45  H18 UNL     1      -0.456  -0.287  -0.746  1.00  0.00           H  
HETATM   46  H19 UNL     1      -2.090   0.144  -0.124  1.00  0.00           H  
HETATM   47  H20 UNL     1      -0.928  -0.756   1.679  1.00  0.00           H  
HETATM   48  H21 UNL     1      -2.124  -1.978   1.224  1.00  0.00           H  
HETATM   49  H22 UNL     1       0.038  -3.091   1.619  1.00  0.00           H  
HETATM   50  H23 UNL     1      -0.489  -3.288  -0.055  1.00  0.00           H  
HETATM   51  H24 UNL     1       1.176  -1.491  -0.744  1.00  0.00           H  
HETATM   52  H25 UNL     1       1.854  -2.866   0.155  1.00  0.00           H  
HETATM   53  H26 UNL     1       1.056  -0.150   1.384  1.00  0.00           H  
HETATM   54  H27 UNL     1       1.828  -1.488   2.253  1.00  0.00           H  
HETATM   55  H28 UNL     1       3.835  -1.218   0.566  1.00  0.00           H  
HETATM   56  H29 UNL     1       2.390   1.430   0.746  1.00  0.00           H  
HETATM   57  H30 UNL     1       5.442  -0.564  -0.494  1.00  0.00           H  
HETATM   58  H31 UNL     1       6.294   0.985  -1.005  1.00  0.00           H  
HETATM   59  H32 UNL     1       5.844   0.069   1.855  1.00  0.00           H  
HETATM   60  H33 UNL     1       6.744   2.302   0.547  1.00  0.00           H  
HETATM   61  H34 UNL     1       8.228  -0.544   1.836  1.00  0.00           H  
HETATM   62  H35 UNL     1       7.292  -1.538   0.720  1.00  0.00           H  
HETATM   63  H36 UNL     1       9.674   1.034  -2.356  1.00  0.00           H  
HETATM   64  H37 UNL     1      10.659   2.183  -1.440  1.00  0.00           H  
HETATM   65  H38 UNL     1      11.103   0.397  -1.455  1.00  0.00           H  
CONECT    1    2   28   29   30
CONECT    2    3   31   32
CONECT    3    4   33   34
CONECT    4    5   35   36
CONECT    5    6   37   38
CONECT    6    7    7   39
CONECT    7    8   40
CONECT    8    9   41   42
CONECT    9   10   10   43
CONECT   10   11   44
CONECT   11   12   45   46
CONECT   12   13   47   48
CONECT   13   14   49   50
CONECT   14   15   51   52
CONECT   15   16   53   54
CONECT   16   17   17   55
CONECT   17   18   56
CONECT   18   19   19   20
CONECT   20   21   57   58
CONECT   21   22   23   59
CONECT   22   60
CONECT   23   24   61   62
CONECT   24   25
CONECT   25   26   27   27
CONECT   26   63   64   65
END

HMDB0036568
     RDKit          3D
Persenone A
 65 64  0  0  0  0  0  0  0  0999 V2000
   -8.7820    1.1095    0.0668 C   0  0  0  0  0  0  0  0  0  0  0  0
   -7.5394    1.7425   -0.5532 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.6298    2.2018    0.5164 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.1757    1.1311    1.4253 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.3316    0.0232    0.9229 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.8849   -0.8063   -0.1129 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.3119   -0.9774   -1.2747 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.0332   -0.3737   -1.7316 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0659   -1.4311   -2.0511 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9199   -1.5776   -1.4689 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4568   -0.6840   -0.4060 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2005   -1.4663    0.8896 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1590   -2.5243    0.6760 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.1658   -1.9745    0.2317 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.7452   -1.0040    1.2434 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.0415   -0.5045    0.7502 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.2075    0.7770    0.5466 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.4758    1.3092    0.0591 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.5703    2.5524   -0.1182 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.6446    0.4725   -0.2346 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.5281    0.4387    1.0172 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.9266    1.7101    1.3119 O   0  0  0  0  0  0  0  0  0  0  0  0
    7.6708   -0.4944    0.8483 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.5582   -0.1653   -0.1608 O   0  0  0  0  0  0  0  0  0  0  0  0
    9.3836    0.9223   -0.2665 C   0  0  0  0  0  0  0  0  0  0  0  0
   10.2819    1.1416   -1.4336 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.3938    1.7754    0.6487 O   0  0  0  0  0  0  0  0  0  0  0  0
   -8.8283    1.4362    1.1102 H   0  0  0  0  0  0  0  0  0  0  0  0
   -8.7964    0.0117   -0.0222 H   0  0  0  0  0  0  0  0  0  0  0  0
   -9.6564    1.4628   -0.5310 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.8614    2.5984   -1.2280 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.0807    1.0326   -1.2219 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.7104    2.6210    0.0124 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.0861    3.0149    1.1477 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.1125    0.7011    1.9247 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.6851    1.6566    2.3045 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.1512   -0.6589    1.8228 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.3293    0.4682    0.6751 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.8290   -1.3237    0.0779 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.8121   -1.6330   -2.0021 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.3125    0.0669   -2.7600 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.6829    0.4834   -1.1835 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.3294   -2.1555   -2.8448 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2116   -2.3896   -1.7355 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4556   -0.2873   -0.7455 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0899    0.1441   -0.1239 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9279   -0.7560    1.6788 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1239   -1.9784    1.2237 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.0383   -3.0913    1.6190 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4893   -3.2879   -0.0551 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.1762   -1.4912   -0.7443 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.8538   -2.8655    0.1555 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.0561   -0.1497    1.3838 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.8276   -1.4877    2.2529 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.8350   -1.2181    0.5661 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.3905    1.4304    0.7455 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.4420   -0.5645   -0.4939 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.2937    0.9846   -1.0049 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.8444    0.0688    1.8552 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.7442    2.3018    0.5466 H   0  0  0  0  0  0  0  0  0  0  0  0
    8.2278   -0.5443    1.8358 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.2923   -1.5380    0.7199 H   0  0  0  0  0  0  0  0  0  0  0  0
    9.6744    1.0336   -2.3561 H   0  0  0  0  0  0  0  0  0  0  0  0
   10.6591    2.1827   -1.4397 H   0  0  0  0  0  0  0  0  0  0  0  0
   11.1034    0.3972   -1.4551 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  1  0
  3  4  1  0
  4  5  1  0
  5  6  1  0
  6  7  2  0
  7  8  1  0
  8  9  1  0
  9 10  2  0
 10 11  1  0
 11 12  1  0
 12 13  1  0
 13 14  1  0
 14 15  1  0
 15 16  1  0
 16 17  2  0
 17 18  1  0
 18 19  2  0
 18 20  1  0
 20 21  1  0
 21 22  1  0
 21 23  1  0
 23 24  1  0
 24 25  1  0
 25 26  1  0
 25 27  2  0
  1 28  1  0
  1 29  1  0
  1 30  1  0
  2 31  1  0
  2 32  1  0
  3 33  1  0
  3 34  1  0
  4 35  1  0
  4 36  1  0
  5 37  1  0
  5 38  1  0
  6 39  1  0
  7 40  1  0
  8 41  1  0
  8 42  1  0
  9 43  1  0
 10 44  1  0
 11 45  1  0
 11 46  1  0
 12 47  1  0
 12 48  1  0
 13 49  1  0
 13 50  1  0
 14 51  1  0
 14 52  1  0
 15 53  1  0
 15 54  1  0
 16 55  1  0
 17 56  1  0
 20 57  1  0
 20 58  1  0
 21 59  1  0
 22 60  1  0
 23 61  1  0
 23 62  1  0
 26 63  1  0
 26 64  1  0
 26 65  1  0
M  END

View in JSmol View Stereo Labels

Synonyms

Value	Source
5,6-Didehydropersin	HMDB

Chemical Formula

C₂₃H₃₈O₄

Average Molecular Weight

378.5454

Monoisotopic Molecular Weight

378.277009704

IUPAC Name

(5E,12Z,15Z)-2-hydroxy-4-oxohenicosa-5,12,15-trien-1-yl acetate

Traditional Name

(5E,12Z,15Z)-2-hydroxy-4-oxohenicosa-5,12,15-trien-1-yl acetate

CAS Registry Number

Not Available

SMILES

CCCCC\C=C/C\C=C/CCCCC\C=C\C(=O)CC(O)COC(C)=O

InChI Identifier

InChI=1S/C23H38O4/c1-3-4-5-6-7-8-9-10-11-12-13-14-15-16-17-18-22(25)19-23(26)20-27-21(2)24/h7-8,10-11,17-18,23,26H,3-6,9,12-16,19-20H2,1-2H3/b8-7-,11-10-,18-17+

InChI Key

YLWJMUPPJKELEC-GQQAEKEGSA-N

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as long-chain fatty alcohols. These are fatty alcohols that have an aliphatic tail of 13 to 21 carbon atoms.

Kingdom

Organic compounds

Super Class

Lipids and lipid-like molecules

Class

Fatty Acyls

Sub Class

Fatty alcohols

Direct Parent

Long-chain fatty alcohols

Alternative Parents

Substituents

Long chain fatty alcohol
Fatty alcohol ester
B'-hydroxy-alpha,beta-unsaturated-ketone
Beta-hydroxy ketone
Acryloyl-group
Enone
Alpha,beta-unsaturated ketone
Carboxylic acid ester
Secondary alcohol
Ketone
Carboxylic acid derivative
Monocarboxylic acid or derivatives
Alcohol
Hydrocarbon derivative
Organic oxygen compound
Carbonyl group
Organic oxide
Organooxygen compound
Aliphatic acyclic compound

Molecular Framework

Aliphatic acyclic compounds

External Descriptors

long-chain fatty alcohol (CHEBI:66735 )

Ontology

Physiological effect

Not Available

Disposition

Biological location

Cytoplasm (HMDB: HMDB0036568)
Cell membrane (HMDB: HMDB0036568)

Biofluid or Excreta

Urine (HMDB: HMDB0036568)

Cellular substructure

Extracellular (HMDB: HMDB0036568)
Membrane (HMDB: HMDB0036568)

Route of exposure

Enteral

Ingestion (HMDB: HMDB0036568)

Source

Endogenous

Endogenous (HMDB: HMDB0036568)

Plant

Plant (HMDB: HMDB0036568)

Animal

Animal (HMDB: HMDB0036568)

Exogenous

Food

Food (HMDB: HMDB0036568)

Fruit

Fruits (FooDB: FOOD00871)

Process

Naturally occurring process

Biological process

Chemical reaction

Lipid peroxidation (HMDB: HMDB0036568)

Biochemical process

Fatty acid metabolism (HMDB: HMDB0036568)

Cellular process

Cell signaling (HMDB: HMDB0036568)

Biochemical pathway

Lipid metabolism pathway (HMDB: HMDB0036568)

Role

Biological role

Membrane stabilizer (HMDB: HMDB0036568)

Nutrient

Nutrient (HMDB: HMDB0036568)

Industrial application

Manufacturing industry

Material processing agent

Fluid processing agent

Surfactant

Surfactant (HMDB: HMDB0036568)

Emulsifier (HMDB: HMDB0036568)

Physical Properties

State

Not Available

Experimental Molecular Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Experimental Chromatographic Properties

Not Available

Predicted Molecular Properties

Property	Value	Source
Water Solubility	0.00029 g/L	ALOGPS
logP	6.04	ALOGPS
logP	5.98	ChemAxon
logS	-6.1	ALOGPS
pKa (Strongest Acidic)	14.25	ChemAxon
pKa (Strongest Basic)	-3.1	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	3	ChemAxon
Hydrogen Donor Count	1	ChemAxon
Polar Surface Area	63.6 Å²	ChemAxon
Rotatable Bond Count	18	ChemAxon
Refractivity	114.68 m³·mol⁻¹	ChemAxon
Polarizability	45.51 Å³	ChemAxon
Number of Rings	0	ChemAxon
Bioavailability	No	ChemAxon
Rule of Five	No	ChemAxon
Ghose Filter	No	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

Predicted Chromatographic Properties

Predicted Collision Cross Sections

Predictor	Adduct Type	CCS Value (Å²)	Reference
DeepCCS	[M+H]+	204.284	30932474
DeepCCS	[M-H]-	201.733	30932474
DeepCCS	[M-2H]-	235.615	30932474
DeepCCS	[M+Na]+	210.967	30932474
AllCCS	[M+H]+	202.9	32859911
AllCCS	[M+H-H2O]+	200.5	32859911
AllCCS	[M+NH4]+	205.2	32859911
AllCCS	[M+Na]+	205.8	32859911
AllCCS	[M-H]-	199.0	32859911
AllCCS	[M+Na-2H]-	201.6	32859911
AllCCS	[M+HCOO]-	204.6	32859911

Predicted Kovats Retention Indices

Underivatized

Metabolite	SMILES	Kovats RI Value	Column Type	Reference
Persenone A	CCCCC\C=C/C\C=C/CCCCC\C=C\C(=O)CC(O)COC(C)=O	3744.6	Standard polar	33892256
Persenone A	CCCCC\C=C/C\C=C/CCCCC\C=C\C(=O)CC(O)COC(C)=O	2592.5	Standard non polar	33892256
Persenone A	CCCCC\C=C/C\C=C/CCCCC\C=C\C(=O)CC(O)COC(C)=O	2831.4	Semi standard non polar	33892256

Derivatized

Derivative Name / Structure	SMILES	Kovats RI Value	Column Type	Reference
Persenone A,1TMS,isomer #1	CCCCC/C=C\C/C=C\CCCCC/C=C/C(=O)CC(COC(C)=O)O[Si](C)(C)C	2841.4	Semi standard non polar	33892256
Persenone A,1TMS,isomer #2	CCCCC/C=C\C/C=C\CCCCC/C=C/C(=CC(O)COC(C)=O)O[Si](C)(C)C	2970.5	Semi standard non polar	33892256
Persenone A,2TMS,isomer #1	CCCCC/C=C\C/C=C\CCCCC/C=C/C(=CC(COC(C)=O)O[Si](C)(C)C)O[Si](C)(C)C	2980.7	Semi standard non polar	33892256
Persenone A,2TMS,isomer #1	CCCCC/C=C\C/C=C\CCCCC/C=C/C(=CC(COC(C)=O)O[Si](C)(C)C)O[Si](C)(C)C	2862.1	Standard non polar	33892256
Persenone A,1TBDMS,isomer #1	CCCCC/C=C\C/C=C\CCCCC/C=C/C(=O)CC(COC(C)=O)O[Si](C)(C)C(C)(C)C	3076.2	Semi standard non polar	33892256
Persenone A,1TBDMS,isomer #2	CCCCC/C=C\C/C=C\CCCCC/C=C/C(=CC(O)COC(C)=O)O[Si](C)(C)C(C)(C)C	3210.8	Semi standard non polar	33892256
Persenone A,2TBDMS,isomer #1	CCCCC/C=C\C/C=C\CCCCC/C=C/C(=CC(COC(C)=O)O[Si](C)(C)C(C)(C)C)O[Si](C)(C)C(C)(C)C	3461.0	Semi standard non polar	33892256
Persenone A,2TBDMS,isomer #1	CCCCC/C=C\C/C=C\CCCCC/C=C/C(=CC(COC(C)=O)O[Si](C)(C)C(C)(C)C)O[Si](C)(C)C(C)(C)C	3221.5	Standard non polar	33892256

Spectra

GC-MS Spectra

Spectrum Type	Description	Splash Key	Deposition Date	Source	View
Predicted GC-MS	Predicted GC-MS Spectrum - Persenone A GC-MS (Non-derivatized) - 70eV, Positive	splash10-0mi6-9776000000-cfcc3d9f3d2999b59cfe	2017-09-01	Wishart Lab	View Spectrum
Predicted GC-MS	Predicted GC-MS Spectrum - Persenone A GC-MS (1 TMS) - 70eV, Positive	splash10-002o-9223000000-f89efe834e3e00a09b64	2017-10-06	Wishart Lab	View Spectrum
Predicted GC-MS	Predicted GC-MS Spectrum - Persenone A GC-MS (Non-derivatized) - 70eV, Positive	Not Available	2021-10-12	Wishart Lab	View Spectrum
Predicted GC-MS	Predicted GC-MS Spectrum - Persenone A GC-MS (Non-derivatized) - 70eV, Positive	Not Available	2021-10-12	Wishart Lab	View Spectrum

MS/MS Spectra

Spectrum Type	Description	Splash Key	Deposition Date	Source	View
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - Persenone A 10V, Positive-QTOF	splash10-03fr-1029000000-69d5fdb6bdb49e6383ba	2016-08-03	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - Persenone A 20V, Positive-QTOF	splash10-0i00-3297000000-7918643bdd2bb4278869	2016-08-03	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - Persenone A 40V, Positive-QTOF	splash10-0006-6491000000-fab46c749f7083b486ba	2016-08-03	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - Persenone A 10V, Negative-QTOF	splash10-0a6r-9137000000-a3a61b23ea2a751d02e1	2016-08-03	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - Persenone A 20V, Negative-QTOF	splash10-0a4i-9122000000-4390b6641700c7ead2b9	2016-08-03	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - Persenone A 40V, Negative-QTOF	splash10-0a4i-9020000000-986a54328f69cd27cdda	2016-08-03	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - Persenone A 10V, Positive-QTOF	splash10-01t9-1229000000-f60e6252699222ea36f4	2021-09-24	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - Persenone A 20V, Positive-QTOF	splash10-0159-9718000000-c17e1d02eefa385bc4af	2021-09-24	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - Persenone A 40V, Positive-QTOF	splash10-05o3-9400000000-432d87d9441630ac8cc4	2021-09-24	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - Persenone A 10V, Negative-QTOF	splash10-0a6r-3109000000-9aaf02138b46197c7b3a	2021-09-24	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - Persenone A 20V, Negative-QTOF	splash10-0a4i-9016000000-8e6e4fc3cb878e7547a1	2021-09-24	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - Persenone A 40V, Negative-QTOF	splash10-0a4i-9121000000-3071a10ebf4966ec5b8b	2021-09-24	Wishart Lab	View Spectrum

Biological Properties

Cellular Locations

Extracellular
Membrane

Biospecimen Locations

Not Available

Tissue Locations

Not Available

Pathways

Not Available

Name	SMPDB/PathBank	KEGG

Normal Concentrations

Not Available

Abnormal Concentrations

Not Available

Associated Disorders and Diseases

Disease References

None

Associated OMIM IDs

None

External Links

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FooDB ID

FDB015473

KNApSAcK ID

Not Available

Chemspider ID

8105307

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

9929676

PDB ID

Not Available

ChEBI ID

66735

Food Biomarker Ontology

Not Available

VMH ID

Not Available

MarkerDB ID

Not Available

Good Scents ID

Not Available

References

Synthesis Reference

Not Available

Material Safety Data Sheet (MSDS)

Not Available

General References

Simons K, Toomre D: Lipid rafts and signal transduction. Nat Rev Mol Cell Biol. 2000 Oct;1(1):31-9. [PubMed:11413487 ]
Watson AD: Thematic review series: systems biology approaches to metabolic and cardiovascular disorders. Lipidomics: a global approach to lipid analysis in biological systems. J Lipid Res. 2006 Oct;47(10):2101-11. Epub 2006 Aug 10. [PubMed:16902246 ]
Sethi JK, Vidal-Puig AJ: Thematic review series: adipocyte biology. Adipose tissue function and plasticity orchestrate nutritional adaptation. J Lipid Res. 2007 Jun;48(6):1253-62. Epub 2007 Mar 20. [PubMed:17374880 ]
Lingwood D, Simons K: Lipid rafts as a membrane-organizing principle. Science. 2010 Jan 1;327(5961):46-50. doi: 10.1126/science.1174621. [PubMed:20044567 ]
(). Yannai, Shmuel. (2004) Dictionary of food compounds with CD-ROM: Additives, flavors, and ingredients. Boca Raton: Chapman & Hall/CRC.. .
Gunstone, Frank D., John L. Harwood, and Albert J. Dijkstra (2007). The lipid handbook with CD-ROM. CRC Press.

Showing metabocard for Persenone A (HMDB0036568)

MOL for HMDB0036568 (Persenone A)

3D MOL for HMDB0036568 (Persenone A)

3D SDF for HMDB0036568 (Persenone A)

3D-SDF for HMDB0036568 (Persenone A)

PDB for HMDB0036568 (Persenone A)

3D PDB for HMDB0036568 (Persenone A)

SMILES for HMDB0036568 (Persenone A)

INCHI for HMDB0036568 (Persenone A)

Structure for HMDB0036568 (Persenone A)

3D Structure for HMDB0036568 (Persenone A)

Predicted Collision Cross Sections

Predicted Kovats Retention Indices

Underivatized

Derivatized

GC-MS Spectra

MS/MS Spectra