Hmdb loader
Record Information
Version5.0
StatusExpected but not Quantified
Creation Date2012-09-11 21:56:03 UTC
Update Date2022-03-07 02:55:03 UTC
HMDB IDHMDB0036760
Secondary Accession Numbers
  • HMDB36760
Metabolite Identification
Common Name(ent-16betaOH)-16,17-Dihydroxy-9(11)-kauren-19-oic acid
DescriptionVerimol D belongs to the class of organic compounds known as stilbenes. These are organic compounds containing a 1,2-diphenylethylene moiety. Stilbenes (C6-C2-C6 ) are derived from the common phenylpropene (C6-C3) skeleton building block. The introduction of one or more hydroxyl groups to a phenyl ring lead to stilbenoids. Verimol D is an extremely weak basic (essentially neutral) compound (based on its pKa). Outside of the human body, Verimol D has been detected, but not quantified in, fruits. This could make verimol D a potential biomarker for the consumption of these foods.
Structure
Data?1563862922
Synonyms
ValueSource
1,2-Bis(4-methoxyphenyl)-1,3-butanediol, 9ciHMDB
14-Hydroxy-14-(hydroxymethyl)-5,9-dimethyltetracyclo[11.2.1.0¹,¹⁰.0⁴,⁹]hexadec-10-ene-5-carboxylateGenerator
(ent-16BetaOH)-16,17-dihydroxy-9(11)-kauren-19-OateGenerator
Chemical FormulaC20H30O4
Average Molecular Weight334.4498
Monoisotopic Molecular Weight334.214409448
IUPAC Name14-hydroxy-14-(hydroxymethyl)-5,9-dimethyltetracyclo[11.2.1.0¹,¹⁰.0⁴,⁹]hexadec-10-ene-5-carboxylic acid
Traditional Name14-hydroxy-14-(hydroxymethyl)-5,9-dimethyltetracyclo[11.2.1.0¹,¹⁰.0⁴,⁹]hexadec-10-ene-5-carboxylic acid
CAS Registry Number55483-24-4
SMILES
CC1(CCCC2(C)C1CCC13CC(CC=C21)C(O)(CO)C3)C(O)=O
InChI Identifier
InChI=1S/C20H30O4/c1-17-7-3-8-18(2,16(22)23)14(17)6-9-19-10-13(4-5-15(17)19)20(24,11-19)12-21/h5,13-14,21,24H,3-4,6-12H2,1-2H3,(H,22,23)
InChI KeyQSJIZGQGHYROGD-UHFFFAOYSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as stilbenes. These are organic compounds containing a 1,2-diphenylethylene moiety. Stilbenes (C6-C2-C6 ) are derived from the common phenylpropene (C6-C3) skeleton building block. The introduction of one or more hydroxyl groups to a phenyl ring lead to stilbenoids.
KingdomOrganic compounds
Super ClassPhenylpropanoids and polyketides
ClassStilbenes
Sub ClassNot Available
Direct ParentStilbenes
Alternative Parents
Substituents
  • Stilbene
  • Phenylpropane
  • Phenoxy compound
  • Anisole
  • Methoxybenzene
  • Phenol ether
  • Alkyl aryl ether
  • Monocyclic benzene moiety
  • Benzenoid
  • Secondary alcohol
  • Ether
  • Organic oxygen compound
  • Organooxygen compound
  • Alcohol
  • Hydrocarbon derivative
  • Aromatic alcohol
  • Aromatic homomonocyclic compound
Molecular FrameworkAromatic homomonocyclic compounds
External DescriptorsNot Available
Ontology
Physiological effectNot Available
Disposition
Process
Role
Physical Properties
StateSolid
Experimental Molecular Properties
PropertyValueReference
Melting Point184 - 185 °CNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
Water Solubility0.1 g/LALOGPS
logP3.19ALOGPS
logP2.39ChemAxon
logS-3.5ALOGPS
pKa (Strongest Acidic)4.53ChemAxon
pKa (Strongest Basic)-3.1ChemAxon
Physiological Charge-1ChemAxon
Hydrogen Acceptor Count4ChemAxon
Hydrogen Donor Count3ChemAxon
Polar Surface Area77.76 ŲChemAxon
Rotatable Bond Count2ChemAxon
Refractivity91.66 m³·mol⁻¹ChemAxon
Polarizability37.16 ųChemAxon
Number of Rings4ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterYesChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DarkChem[M+H]+178.30531661259
DarkChem[M-H]-172.44531661259
DeepCCS[M-2H]-211.18130932474
DeepCCS[M+Na]+186.40830932474
AllCCS[M+H]+181.932859911
AllCCS[M+H-H2O]+179.132859911
AllCCS[M+NH4]+184.432859911
AllCCS[M+Na]+185.132859911
AllCCS[M-H]-185.732859911
AllCCS[M+Na-2H]-185.932859911
AllCCS[M+HCOO]-186.332859911

Predicted Kovats Retention Indices

Underivatized

MetaboliteSMILESKovats RI ValueColumn TypeReference
(ent-16betaOH)-16,17-Dihydroxy-9(11)-kauren-19-oic acidCC1(CCCC2(C)C1CCC13CC(CC=C21)C(O)(CO)C3)C(O)=O3149.2Standard polar33892256
(ent-16betaOH)-16,17-Dihydroxy-9(11)-kauren-19-oic acidCC1(CCCC2(C)C1CCC13CC(CC=C21)C(O)(CO)C3)C(O)=O2709.9Standard non polar33892256
(ent-16betaOH)-16,17-Dihydroxy-9(11)-kauren-19-oic acidCC1(CCCC2(C)C1CCC13CC(CC=C21)C(O)(CO)C3)C(O)=O2870.7Semi standard non polar33892256

Derivatized

Derivative Name / StructureSMILESKovats RI ValueColumn TypeReference
(ent-16betaOH)-16,17-Dihydroxy-9(11)-kauren-19-oic acid,1TMS,isomer #1CC1(C(=O)O)CCCC2(C)C3=CCC4CC3(CCC12)CC4(CO)O[Si](C)(C)C2923.4Semi standard non polar33892256
(ent-16betaOH)-16,17-Dihydroxy-9(11)-kauren-19-oic acid,1TMS,isomer #2CC1(C(=O)O)CCCC2(C)C3=CCC4CC3(CCC12)CC4(O)CO[Si](C)(C)C2933.5Semi standard non polar33892256
(ent-16betaOH)-16,17-Dihydroxy-9(11)-kauren-19-oic acid,1TMS,isomer #3CC1(C(=O)O[Si](C)(C)C)CCCC2(C)C3=CCC4CC3(CCC12)CC4(O)CO2833.7Semi standard non polar33892256
(ent-16betaOH)-16,17-Dihydroxy-9(11)-kauren-19-oic acid,2TMS,isomer #1CC1(C(=O)O[Si](C)(C)C)CCCC2(C)C3=CCC4CC3(CCC12)CC4(CO)O[Si](C)(C)C2793.5Semi standard non polar33892256
(ent-16betaOH)-16,17-Dihydroxy-9(11)-kauren-19-oic acid,2TMS,isomer #2CC1(C(=O)O)CCCC2(C)C3=CCC4CC3(CCC12)CC4(CO[Si](C)(C)C)O[Si](C)(C)C2898.3Semi standard non polar33892256
(ent-16betaOH)-16,17-Dihydroxy-9(11)-kauren-19-oic acid,2TMS,isomer #3CC1(C(=O)O[Si](C)(C)C)CCCC2(C)C3=CCC4CC3(CCC12)CC4(O)CO[Si](C)(C)C2799.6Semi standard non polar33892256
(ent-16betaOH)-16,17-Dihydroxy-9(11)-kauren-19-oic acid,3TMS,isomer #1CC1(C(=O)O[Si](C)(C)C)CCCC2(C)C3=CCC4CC3(CCC12)CC4(CO[Si](C)(C)C)O[Si](C)(C)C2787.0Semi standard non polar33892256
(ent-16betaOH)-16,17-Dihydroxy-9(11)-kauren-19-oic acid,1TBDMS,isomer #1CC1(C(=O)O)CCCC2(C)C3=CCC4CC3(CCC12)CC4(CO)O[Si](C)(C)C(C)(C)C3176.3Semi standard non polar33892256
(ent-16betaOH)-16,17-Dihydroxy-9(11)-kauren-19-oic acid,1TBDMS,isomer #2CC1(C(=O)O)CCCC2(C)C3=CCC4CC3(CCC12)CC4(O)CO[Si](C)(C)C(C)(C)C3190.2Semi standard non polar33892256
(ent-16betaOH)-16,17-Dihydroxy-9(11)-kauren-19-oic acid,1TBDMS,isomer #3CC1(C(=O)O[Si](C)(C)C(C)(C)C)CCCC2(C)C3=CCC4CC3(CCC12)CC4(O)CO3110.0Semi standard non polar33892256
(ent-16betaOH)-16,17-Dihydroxy-9(11)-kauren-19-oic acid,2TBDMS,isomer #1CC1(C(=O)O[Si](C)(C)C(C)(C)C)CCCC2(C)C3=CCC4CC3(CCC12)CC4(CO)O[Si](C)(C)C(C)(C)C3298.9Semi standard non polar33892256
(ent-16betaOH)-16,17-Dihydroxy-9(11)-kauren-19-oic acid,2TBDMS,isomer #2CC1(C(=O)O)CCCC2(C)C3=CCC4CC3(CCC12)CC4(CO[Si](C)(C)C(C)(C)C)O[Si](C)(C)C(C)(C)C3398.5Semi standard non polar33892256
(ent-16betaOH)-16,17-Dihydroxy-9(11)-kauren-19-oic acid,2TBDMS,isomer #3CC1(C(=O)O[Si](C)(C)C(C)(C)C)CCCC2(C)C3=CCC4CC3(CCC12)CC4(O)CO[Si](C)(C)C(C)(C)C3302.0Semi standard non polar33892256
(ent-16betaOH)-16,17-Dihydroxy-9(11)-kauren-19-oic acid,3TBDMS,isomer #1CC1(C(=O)O[Si](C)(C)C(C)(C)C)CCCC2(C)C3=CCC4CC3(CCC12)CC4(CO[Si](C)(C)C(C)(C)C)O[Si](C)(C)C(C)(C)C3511.3Semi standard non polar33892256
Spectra

GC-MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted GC-MSPredicted GC-MS Spectrum - (ent-16betaOH)-16,17-Dihydroxy-9(11)-kauren-19-oic acid GC-MS (Non-derivatized) - 70eV, Positivesplash10-0cdi-2398000000-db160aa52fa0588c28b12017-09-01Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - (ent-16betaOH)-16,17-Dihydroxy-9(11)-kauren-19-oic acid GC-MS (3 TMS) - 70eV, Positivesplash10-000i-3004490000-bc6803d30a9f1ac81b7b2017-10-06Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - (ent-16betaOH)-16,17-Dihydroxy-9(11)-kauren-19-oic acid GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (ent-16betaOH)-16,17-Dihydroxy-9(11)-kauren-19-oic acid 10V, Positive-QTOFsplash10-000i-0049000000-1d19bb5fd019b04d0f852016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (ent-16betaOH)-16,17-Dihydroxy-9(11)-kauren-19-oic acid 20V, Positive-QTOFsplash10-01bj-0294000000-50cf9b6744e26de796ab2016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (ent-16betaOH)-16,17-Dihydroxy-9(11)-kauren-19-oic acid 40V, Positive-QTOFsplash10-00xr-4691000000-3be672e5dc86cf8aeb712016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (ent-16betaOH)-16,17-Dihydroxy-9(11)-kauren-19-oic acid 10V, Negative-QTOFsplash10-001i-0039000000-7370478cb2b6bf5512592016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (ent-16betaOH)-16,17-Dihydroxy-9(11)-kauren-19-oic acid 20V, Negative-QTOFsplash10-0ka9-0096000000-3c3d8ac7ddd3d2f1e42f2016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (ent-16betaOH)-16,17-Dihydroxy-9(11)-kauren-19-oic acid 40V, Negative-QTOFsplash10-0a4i-0092000000-d96aa01fdbc3ca860b8d2016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (ent-16betaOH)-16,17-Dihydroxy-9(11)-kauren-19-oic acid 10V, Negative-QTOFsplash10-001i-0009000000-fd5cd126f4d2eefd90302021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (ent-16betaOH)-16,17-Dihydroxy-9(11)-kauren-19-oic acid 20V, Negative-QTOFsplash10-001i-0009000000-ff6b61413fede893ddef2021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (ent-16betaOH)-16,17-Dihydroxy-9(11)-kauren-19-oic acid 40V, Negative-QTOFsplash10-001i-1049000000-49d590eef34f9c62c1e92021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (ent-16betaOH)-16,17-Dihydroxy-9(11)-kauren-19-oic acid 10V, Positive-QTOFsplash10-000i-0095000000-f5ab328850da8c4c26832021-09-23Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (ent-16betaOH)-16,17-Dihydroxy-9(11)-kauren-19-oic acid 20V, Positive-QTOFsplash10-01w0-0191000000-2129098f456d4a9d68cc2021-09-23Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (ent-16betaOH)-16,17-Dihydroxy-9(11)-kauren-19-oic acid 40V, Positive-QTOFsplash10-0a5i-2930000000-20e0bac61dc8d2f5d5d42021-09-23Wishart LabView Spectrum
Biological Properties
Cellular Locations
  • Extracellular
  • Membrane
Biospecimen LocationsNot Available
Tissue LocationsNot Available
Pathways
Normal Concentrations
Not Available
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDFDB015422
KNApSAcK IDNot Available
Chemspider IDNot Available
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound73819207
PDB IDNot Available
ChEBI IDNot Available
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDNot Available
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General References
  1. Simons K, Toomre D: Lipid rafts and signal transduction. Nat Rev Mol Cell Biol. 2000 Oct;1(1):31-9. [PubMed:11413487 ]
  2. Watson AD: Thematic review series: systems biology approaches to metabolic and cardiovascular disorders. Lipidomics: a global approach to lipid analysis in biological systems. J Lipid Res. 2006 Oct;47(10):2101-11. Epub 2006 Aug 10. [PubMed:16902246 ]
  3. Sethi JK, Vidal-Puig AJ: Thematic review series: adipocyte biology. Adipose tissue function and plasticity orchestrate nutritional adaptation. J Lipid Res. 2007 Jun;48(6):1253-62. Epub 2007 Mar 20. [PubMed:17374880 ]
  4. Lingwood D, Simons K: Lipid rafts as a membrane-organizing principle. Science. 2010 Jan 1;327(5961):46-50. doi: 10.1126/science.1174621. [PubMed:20044567 ]
  5. (). Yannai, Shmuel. (2004) Dictionary of food compounds with CD-ROM: Additives, flavors, and ingredients. Boca Raton: Chapman & Hall/CRC.. .
  6. Gunstone, Frank D., John L. Harwood, and Albert J. Dijkstra (2007). The lipid handbook with CD-ROM. CRC Press.