Hmdb loader
Record Information
Version5.0
StatusExpected but not Quantified
Creation Date2012-09-11 21:56:22 UTC
Update Date2022-03-07 02:55:03 UTC
HMDB IDHMDB0036765
Secondary Accession Numbers
  • HMDB36765
Metabolite Identification
Common NameRomucosine D
DescriptionRomucosine D belongs to the class of organic compounds known as aporphines. These are quinoline alkaloids containing the dibenzo[de,g]quinoline ring system or a dehydrogenated derivative thereof. Romucosine D is an extremely weak basic (essentially neutral) compound (based on its pKa). Outside of the human body, romucosine D has been detected, but not quantified in, alcoholic beverages and fruits. This could make romucosine D a potential biomarker for the consumption of these foods.
Structure
Data?1563862923
Synonyms
ValueSource
(+)-Romucosine DHMDB
Methyl 4,15,16-trimethoxy-10-azatetracyclo[7.7.1.0²,⁷.0¹³,¹⁷]heptadeca-1(17),2(7),3,5,13,15-hexaene-10-carboxylic acidGenerator
Chemical FormulaC21H23NO5
Average Molecular Weight369.411
Monoisotopic Molecular Weight369.157622851
IUPAC Namemethyl 4,15,16-trimethoxy-10-azatetracyclo[7.7.1.0²,⁷.0¹³,¹⁷]heptadeca-1(17),2(7),3,5,13,15-hexaene-10-carboxylate
Traditional Namemethyl 4,15,16-trimethoxy-10-azatetracyclo[7.7.1.0²,⁷.0¹³,¹⁷]heptadeca-1(17),2(7),3,5,13,15-hexaene-10-carboxylate
CAS Registry Number356048-26-5
SMILES
COC(=O)N1CCC2=CC(OC)=C(OC)C3=C2C1CC1=C3C=C(OC)C=C1
InChI Identifier
InChI=1S/C21H23NO5/c1-24-14-6-5-12-9-16-18-13(7-8-22(16)21(23)27-4)10-17(25-2)20(26-3)19(18)15(12)11-14/h5-6,10-11,16H,7-9H2,1-4H3
InChI KeyGIUSYZFFMYWEAY-UHFFFAOYSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as aporphines. These are quinoline alkaloids containing the dibenzo[de,g]quinoline ring system or a dehydrogenated derivative thereof.
KingdomOrganic compounds
Super ClassAlkaloids and derivatives
ClassAporphines
Sub ClassNot Available
Direct ParentAporphines
Alternative ParentsNot Available
SubstituentsNot Available
Molecular FrameworkAromatic heteropolycyclic compounds
External DescriptorsNot Available
Ontology
Physiological effectNot Available
Disposition
ProcessNot Available
Role
Physical Properties
StateNot Available
Experimental Molecular Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
Water Solubility0.029 g/LALOGPS
logP3.34ALOGPS
logP3.07ChemAxon
logS-4.1ALOGPS
pKa (Strongest Basic)-4.4ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count4ChemAxon
Hydrogen Donor Count0ChemAxon
Polar Surface Area57.23 ŲChemAxon
Rotatable Bond Count4ChemAxon
Refractivity101.31 m³·mol⁻¹ChemAxon
Polarizability39.66 ųChemAxon
Number of Rings4ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterYesChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DarkChem[M+H]+186.1531661259
DarkChem[M-H]-184.73731661259
DeepCCS[M+H]+190.15630932474
DeepCCS[M-H]-187.79830932474
DeepCCS[M-2H]-221.87230932474
DeepCCS[M+Na]+197.130932474
AllCCS[M+H]+188.232859911
AllCCS[M+H-H2O]+185.332859911
AllCCS[M+NH4]+190.932859911
AllCCS[M+Na]+191.732859911
AllCCS[M-H]-194.532859911
AllCCS[M+Na-2H]-194.332859911
AllCCS[M+HCOO]-194.332859911

Predicted Kovats Retention Indices

Underivatized

MetaboliteSMILESKovats RI ValueColumn TypeReference
Romucosine DCOC(=O)N1CCC2=CC(OC)=C(OC)C3=C2C1CC1=C3C=C(OC)C=C14348.7Standard polar33892256
Romucosine DCOC(=O)N1CCC2=CC(OC)=C(OC)C3=C2C1CC1=C3C=C(OC)C=C13055.8Standard non polar33892256
Romucosine DCOC(=O)N1CCC2=CC(OC)=C(OC)C3=C2C1CC1=C3C=C(OC)C=C13078.5Semi standard non polar33892256
Spectra

GC-MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted GC-MSPredicted GC-MS Spectrum - Romucosine D GC-MS (Non-derivatized) - 70eV, Positivesplash10-0ug0-0029000000-e2d1965e4275da374c402017-09-01Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Romucosine D GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Romucosine D 10V, Positive-QTOFsplash10-00di-0009000000-2c058335ded230264e6b2015-04-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Romucosine D 20V, Positive-QTOFsplash10-000i-0019000000-cc289bba3da7f7cf2bb42015-04-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Romucosine D 40V, Positive-QTOFsplash10-0h0u-0092000000-86f5146154ac31694b1c2015-04-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Romucosine D 10V, Negative-QTOFsplash10-014r-0009000000-4e7f8b643361815041322015-04-25Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Romucosine D 20V, Negative-QTOFsplash10-000i-0009000000-77f50113f86cd1c525fe2015-04-25Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Romucosine D 40V, Negative-QTOFsplash10-00di-2049000000-5998ebc75370b77a90062015-04-25Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Romucosine D 10V, Negative-QTOFsplash10-014i-0009000000-7fb18f76427dfc094ae42021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Romucosine D 20V, Negative-QTOFsplash10-0006-0092000000-aea3583735a1b8afde1a2021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Romucosine D 40V, Negative-QTOFsplash10-0006-4094000000-3d18402e2a6ef6ac6f042021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Romucosine D 10V, Positive-QTOFsplash10-00di-0009000000-cb20214e55840252e9f12021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Romucosine D 20V, Positive-QTOFsplash10-01w1-0029000000-a65dafd6d1feb613c33d2021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Romucosine D 40V, Positive-QTOFsplash10-02aj-0094000000-885a254209ff2329714c2021-09-22Wishart LabView Spectrum
Biological Properties
Cellular Locations
  • Membrane
Biospecimen LocationsNot Available
Tissue LocationsNot Available
Pathways
Normal Concentrations
Not Available
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDFDB015706
KNApSAcK IDC00037748
Chemspider IDNot Available
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound85102142
PDB IDNot Available
ChEBI IDNot Available
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDNot Available
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General References
  1. (). Yannai, Shmuel. (2004) Dictionary of food compounds with CD-ROM: Additives, flavors, and ingredients. Boca Raton: Chapman & Hall/CRC.. .