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Record Information
Version5.0
StatusExpected but not Quantified
Creation Date2012-09-11 22:00:49 UTC
Update Date2022-03-07 02:55:05 UTC
HMDB IDHMDB0036835
Secondary Accession Numbers
  • HMDB36835
Metabolite Identification
Common NameSagittariol
DescriptionSagittariol belongs to the class of organic compounds known as colensane and clerodane diterpenoids. These are diterpenoids with a structure based on the clerodane or the colensane skeleton. Clerodanes arise from labdanes by two methyl migrations. Based on a literature review a small amount of articles have been published on Sagittariol.
Structure
Data?1563862935
SynonymsNot Available
Chemical FormulaC20H34O2
Average Molecular Weight306.4828
Monoisotopic Molecular Weight306.255880332
IUPAC Name5-[5-(hydroxymethyl)-1,2,4a-trimethyl-1,2,3,4,4a,7,8,8a-octahydronaphthalen-1-yl]-3-methylpent-1-en-3-ol
Traditional Name5-[5-(hydroxymethyl)-1,2,4a-trimethyl-2,3,4,7,8,8a-hexahydronaphthalen-1-yl]-3-methylpent-1-en-3-ol
CAS Registry Number56497-92-8
SMILES
CC1CCC2(C)C(CCC=C2CO)C1(C)CCC(C)(O)C=C
InChI Identifier
InChI=1S/C20H34O2/c1-6-18(3,22)12-13-19(4)15(2)10-11-20(5)16(14-21)8-7-9-17(19)20/h6,8,15,17,21-22H,1,7,9-14H2,2-5H3
InChI KeyVAQFTHFEFSWPGQ-UHFFFAOYSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as colensane and clerodane diterpenoids. These are diterpenoids with a structure based on the clerodane or the colensane skeleton. Clerodanes arise from labdanes by two methyl migrations.
KingdomOrganic compounds
Super ClassLipids and lipid-like molecules
ClassPrenol lipids
Sub ClassDiterpenoids
Direct ParentColensane and clerodane diterpenoids
Alternative Parents
Substituents
  • Clerodane diterpenoid
  • Tertiary alcohol
  • Organic oxygen compound
  • Hydrocarbon derivative
  • Primary alcohol
  • Organooxygen compound
  • Alcohol
  • Aliphatic homopolycyclic compound
Molecular FrameworkAliphatic homopolycyclic compounds
External DescriptorsNot Available
Ontology
Physiological effectNot Available
Disposition
Process
Role
Physical Properties
StateSolid
Experimental Molecular Properties
PropertyValueReference
Melting Point109 °CNot Available
Boiling PointNot AvailableNot Available
Water Solubility0.092 mg/L @ 25 °C (est)The Good Scents Company Information System
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
Water Solubility0.0052 g/LALOGPS
logP4.71ALOGPS
logP3.97ChemAxon
logS-4.8ALOGPS
pKa (Strongest Acidic)17.5ChemAxon
pKa (Strongest Basic)-1.2ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count2ChemAxon
Hydrogen Donor Count2ChemAxon
Polar Surface Area40.46 ŲChemAxon
Rotatable Bond Count5ChemAxon
Refractivity93.93 m³·mol⁻¹ChemAxon
Polarizability37.11 ųChemAxon
Number of Rings2ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterYesChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DarkChem[M+H]+173.69231661259
DarkChem[M-H]-168.16631661259
DeepCCS[M+H]+176.96730932474
DeepCCS[M-H]-174.60930932474
DeepCCS[M-2H]-207.49530932474
DeepCCS[M+Na]+183.0630932474
AllCCS[M+H]+177.932859911
AllCCS[M+H-H2O]+174.932859911
AllCCS[M+NH4]+180.632859911
AllCCS[M+Na]+181.432859911
AllCCS[M-H]-183.932859911
AllCCS[M+Na-2H]-184.732859911
AllCCS[M+HCOO]-185.732859911

Predicted Kovats Retention Indices

Underivatized

MetaboliteSMILESKovats RI ValueColumn TypeReference
SagittariolCC1CCC2(C)C(CCC=C2CO)C1(C)CCC(C)(O)C=C2407.6Standard polar33892256
SagittariolCC1CCC2(C)C(CCC=C2CO)C1(C)CCC(C)(O)C=C2327.3Standard non polar33892256
SagittariolCC1CCC2(C)C(CCC=C2CO)C1(C)CCC(C)(O)C=C2372.0Semi standard non polar33892256

Derivatized

Derivative Name / StructureSMILESKovats RI ValueColumn TypeReference
Sagittariol,1TMS,isomer #1C=CC(C)(O)CCC1(C)C(C)CCC2(C)C(CO[Si](C)(C)C)=CCCC212412.9Semi standard non polar33892256
Sagittariol,1TMS,isomer #2C=CC(C)(CCC1(C)C(C)CCC2(C)C(CO)=CCCC21)O[Si](C)(C)C2462.3Semi standard non polar33892256
Sagittariol,2TMS,isomer #1C=CC(C)(CCC1(C)C(C)CCC2(C)C(CO[Si](C)(C)C)=CCCC21)O[Si](C)(C)C2442.6Semi standard non polar33892256
Sagittariol,1TBDMS,isomer #1C=CC(C)(O)CCC1(C)C(C)CCC2(C)C(CO[Si](C)(C)C(C)(C)C)=CCCC212658.4Semi standard non polar33892256
Sagittariol,1TBDMS,isomer #2C=CC(C)(CCC1(C)C(C)CCC2(C)C(CO)=CCCC21)O[Si](C)(C)C(C)(C)C2713.0Semi standard non polar33892256
Sagittariol,2TBDMS,isomer #1C=CC(C)(CCC1(C)C(C)CCC2(C)C(CO[Si](C)(C)C(C)(C)C)=CCCC21)O[Si](C)(C)C(C)(C)C2914.1Semi standard non polar33892256
Spectra

GC-MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted GC-MSPredicted GC-MS Spectrum - Sagittariol GC-MS (Non-derivatized) - 70eV, Positivesplash10-00fu-3090000000-82f484023dc15794492e2017-09-01Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Sagittariol GC-MS (2 TMS) - 70eV, Positivesplash10-000i-4302900000-f70625b46e562828b2e32017-10-06Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Sagittariol GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Sagittariol 10V, Positive-QTOFsplash10-052r-0092000000-bc93e34c599630bd96a82016-06-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Sagittariol 20V, Positive-QTOFsplash10-00y0-2090000000-bdb0f0f19d40012e5d2b2016-06-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Sagittariol 40V, Positive-QTOFsplash10-0fri-7980000000-9336b248a06fa3dc6cc72016-06-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Sagittariol 10V, Negative-QTOFsplash10-0a4i-0059000000-7c11f67d0812aad7b2a32016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Sagittariol 20V, Negative-QTOFsplash10-0a4r-0093000000-ed8ee62f23935baebcf92016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Sagittariol 40V, Negative-QTOFsplash10-05n1-5090000000-f163bd158132e9ee26852016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Sagittariol 10V, Negative-QTOFsplash10-0a4i-0019000000-55e8bf9e579211f078a62021-09-23Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Sagittariol 20V, Negative-QTOFsplash10-0a4i-5019000000-bc3ba83ac6100240530d2021-09-23Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Sagittariol 40V, Negative-QTOFsplash10-0udi-5097000000-2bfb9e53d1e314867d702021-09-23Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Sagittariol 10V, Positive-QTOFsplash10-00y0-3291000000-f38f3b017a6ffd1852652021-09-25Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Sagittariol 20V, Positive-QTOFsplash10-000i-1920000000-4bec9c21dd63b0321a492021-09-25Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Sagittariol 40V, Positive-QTOFsplash10-014i-9300000000-936c03df114f8984abaa2021-09-25Wishart LabView Spectrum
Biological Properties
Cellular Locations
  • Extracellular
  • Membrane
Biospecimen LocationsNot Available
Tissue LocationsNot Available
Pathways
Normal Concentrations
Not Available
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDFDB015786
KNApSAcK IDNot Available
Chemspider ID35014268
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound101603339
PDB IDNot Available
ChEBI ID170117
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDrw1857431
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General References
  1. Simons K, Toomre D: Lipid rafts and signal transduction. Nat Rev Mol Cell Biol. 2000 Oct;1(1):31-9. [PubMed:11413487 ]
  2. Watson AD: Thematic review series: systems biology approaches to metabolic and cardiovascular disorders. Lipidomics: a global approach to lipid analysis in biological systems. J Lipid Res. 2006 Oct;47(10):2101-11. Epub 2006 Aug 10. [PubMed:16902246 ]
  3. Sethi JK, Vidal-Puig AJ: Thematic review series: adipocyte biology. Adipose tissue function and plasticity orchestrate nutritional adaptation. J Lipid Res. 2007 Jun;48(6):1253-62. Epub 2007 Mar 20. [PubMed:17374880 ]
  4. Lingwood D, Simons K: Lipid rafts as a membrane-organizing principle. Science. 2010 Jan 1;327(5961):46-50. doi: 10.1126/science.1174621. [PubMed:20044567 ]
  5. (). Yannai, Shmuel. (2004) Dictionary of food compounds with CD-ROM: Additives, flavors, and ingredients. Boca Raton: Chapman & Hall/CRC.. .
  6. Gunstone, Frank D., John L. Harwood, and Albert J. Dijkstra (2007). The lipid handbook with CD-ROM. CRC Press.