Hmdb loader
Record Information
Version5.0
StatusDetected but not Quantified
Creation Date2012-09-11 23:29:14 UTC
Update Date2022-03-07 02:55:40 UTC
HMDB IDHMDB0038207
Secondary Accession Numbers
  • HMDB38207
Metabolite Identification
Common Namegamma-Cadinene
Descriptiongamma-Cadinene, also known as γ-cadinene, belongs to the class of organic compounds known as sesquiterpenoids. These are terpenes with three consecutive isoprene units. Based on a literature review a significant number of articles have been published on gamma-Cadinene.
Structure
Data?1601237995
Synonyms
ValueSource
g-CadineneGenerator
Γ-cadineneGenerator
(-)-g-CadineneHMDB
(-)-Γ-cadineneHMDB
gamma-Cadinene, (+)-gamma(1)-isomerHMDB
gamma-Cadinene, (-)-isomerHMDB
gamma-Cadinene, (+)-isomerHMDB
1beta,6alpha,7BetaH-cadina-4,10(15)-dieneHMDB
1Β,6α,7βh-cadina-4,10(15)-dieneHMDB
1beta,6alpha,7ΒH-cadina-4,10(15)-dieneHMDB
(-)-gamma-CadineneHMDB
(±)-cadina-4,10(15)-dieneHMDB
(±)-gamma-cadineneHMDB
(±)-γ-cadineneHMDB
gamma-CardineneHMDB
Γ-cardineneHMDB
gamma-CadineneChEBI
Chemical FormulaC15H24
Average Molecular Weight204.357
Monoisotopic Molecular Weight204.187800773
IUPAC Name(1R,4aS,8aS)-7-methyl-4-methylidene-1-(propan-2-yl)-1,2,3,4,4a,5,6,8a-octahydronaphthalene
Traditional Namegamma-cadinene
CAS Registry Number39029-41-9
SMILES
[H][C@]12CCC(C)=C[C@]1([H])[C@H](CCC2=C)C(C)C
InChI Identifier
InChI=1S/C15H24/c1-10(2)13-8-6-12(4)14-7-5-11(3)9-15(13)14/h9-10,13-15H,4-8H2,1-3H3/t13-,14-,15-/m1/s1
InChI KeyWRHGORWNJGOVQY-RBSFLKMASA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as sesquiterpenoids. These are terpenes with three consecutive isoprene units.
KingdomOrganic compounds
Super ClassLipids and lipid-like molecules
ClassPrenol lipids
Sub ClassSesquiterpenoids
Direct ParentSesquiterpenoids
Alternative Parents
Substituents
  • Sesquiterpenoid
  • Cadinane sesquiterpenoid
  • Branched unsaturated hydrocarbon
  • Polycyclic hydrocarbon
  • Cyclic olefin
  • Unsaturated aliphatic hydrocarbon
  • Unsaturated hydrocarbon
  • Olefin
  • Hydrocarbon
  • Aliphatic homopolycyclic compound
Molecular FrameworkAliphatic homopolycyclic compounds
External Descriptors
Ontology
Physiological effect
Disposition
ProcessNot Available
RoleNot Available
Physical Properties
StateLiquid
Experimental Molecular Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling Point271.00 to 276.00 °C. @ 760.00 mm HgThe Good Scents Company Information System
Water Solubility0.054 mg/L @ 25 °C (est)The Good Scents Company Information System
LogP6.352 (est)The Good Scents Company Information System
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
Water Solubility0.0059 g/LALOGPS
logP4.48ALOGPS
logP4.51ChemAxon
logS-4.5ALOGPS
Physiological Charge0ChemAxon
Hydrogen Acceptor Count0ChemAxon
Hydrogen Donor Count0ChemAxon
Polar Surface Area0 ŲChemAxon
Rotatable Bond Count1ChemAxon
Refractivity67.53 m³·mol⁻¹ChemAxon
Polarizability26.38 ųChemAxon
Number of Rings2ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterYesChemAxon
Veber's RuleYesChemAxon
MDDR-like RuleNoChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DeepCCS[M-2H]-186.35630932474
DeepCCS[M+Na]+161.37530932474
AllCCS[M+H]+147.632859911
AllCCS[M+H-H2O]+143.632859911
AllCCS[M+NH4]+151.332859911
AllCCS[M+Na]+152.432859911
AllCCS[M-H]-156.432859911
AllCCS[M+Na-2H]-157.032859911
AllCCS[M+HCOO]-157.732859911

Predicted Kovats Retention Indices

Underivatized

MetaboliteSMILESKovats RI ValueColumn TypeReference
gamma-Cadinene[H][C@]12CCC(C)=C[C@]1([H])[C@H](CCC2=C)C(C)C1702.4Standard polar33892256
gamma-Cadinene[H][C@]12CCC(C)=C[C@]1([H])[C@H](CCC2=C)C(C)C1486.5Standard non polar33892256
gamma-Cadinene[H][C@]12CCC(C)=C[C@]1([H])[C@H](CCC2=C)C(C)C1490.3Semi standard non polar33892256
Spectra

GC-MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted GC-MSPredicted GC-MS Spectrum - gamma-Cadinene GC-MS (Non-derivatized) - 70eV, Positivesplash10-01p5-2900000000-9b4c6cbe257f47e9d9fe2017-07-27Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - gamma-Cadinene GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - gamma-Cadinene 10V, Positive-QTOFsplash10-0a4i-0490000000-2e5ae79ecdfa1abff4652017-06-28Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - gamma-Cadinene 20V, Positive-QTOFsplash10-0bta-3920000000-9e57207f76fd77fb69fe2017-06-28Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - gamma-Cadinene 40V, Positive-QTOFsplash10-0gvt-6900000000-1be8491b4d6a6699abcb2017-06-28Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - gamma-Cadinene 10V, Negative-QTOFsplash10-0udi-0090000000-dc85480898a0884141d62017-06-28Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - gamma-Cadinene 20V, Negative-QTOFsplash10-0udi-0190000000-93c533f1913690fe39792017-06-28Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - gamma-Cadinene 40V, Negative-QTOFsplash10-000i-1910000000-cb52feba74ceaddb93602017-06-28Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - gamma-Cadinene 10V, Negative-QTOFsplash10-0udi-0090000000-7ccf03fa1149a1e9f55f2021-09-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - gamma-Cadinene 20V, Negative-QTOFsplash10-0udi-0090000000-7ccf03fa1149a1e9f55f2021-09-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - gamma-Cadinene 40V, Negative-QTOFsplash10-0udi-0590000000-152857a7341cf903230d2021-09-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - gamma-Cadinene 10V, Positive-QTOFsplash10-0a4i-1390000000-dec08090d83090223c292021-09-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - gamma-Cadinene 20V, Positive-QTOFsplash10-0a4i-4930000000-d018d03e18bf9231bbfa2021-09-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - gamma-Cadinene 40V, Positive-QTOFsplash10-0006-9500000000-89d5115efd887002de1b2021-09-24Wishart LabView Spectrum
Biological Properties
Cellular Locations
  • Extracellular
  • Membrane
Biospecimen Locations
  • Saliva
Tissue LocationsNot Available
Pathways
Normal Concentrations
BiospecimenStatusValueAgeSexConditionReferenceDetails
SalivaDetected but not QuantifiedNot QuantifiedAdult (>18 years old)Not SpecifiedNormal details
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDFDB097241
KNApSAcK IDC00030345 C00036278
Chemspider ID83342
KEGG Compound IDC19738
BioCyc IDCPD-12881
BiGG IDNot Available
Wikipedia LinkCadinenes
METLIN IDNot Available
PubChem Compound92313
PDB IDNot Available
ChEBI ID63203
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDrw1595501
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General References
  1. Simons K, Toomre D: Lipid rafts and signal transduction. Nat Rev Mol Cell Biol. 2000 Oct;1(1):31-9. [PubMed:11413487 ]
  2. Watson AD: Thematic review series: systems biology approaches to metabolic and cardiovascular disorders. Lipidomics: a global approach to lipid analysis in biological systems. J Lipid Res. 2006 Oct;47(10):2101-11. Epub 2006 Aug 10. [PubMed:16902246 ]
  3. Sethi JK, Vidal-Puig AJ: Thematic review series: adipocyte biology. Adipose tissue function and plasticity orchestrate nutritional adaptation. J Lipid Res. 2007 Jun;48(6):1253-62. Epub 2007 Mar 20. [PubMed:17374880 ]
  4. Lingwood D, Simons K: Lipid rafts as a membrane-organizing principle. Science. 2010 Jan 1;327(5961):46-50. doi: 10.1126/science.1174621. [PubMed:20044567 ]
  5. (). Yannai, Shmuel. (2004) Dictionary of food compounds with CD-ROM: Additives, flavors, and ingredients. Boca Raton: Chapman & Hall/CRC.. .
  6. Gunstone, Frank D., John L. Harwood, and Albert J. Dijkstra (2007). The lipid handbook with CD-ROM. CRC Press.