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Record Information
Version5.0
StatusExpected but not Quantified
Creation Date2012-09-11 23:56:36 UTC
Update Date2022-03-07 02:55:51 UTC
HMDB IDHMDB0038614
Secondary Accession Numbers
  • HMDB38614
Metabolite Identification
Common Namegamma-L-Glutamyl-L-pipecolic acid
Descriptiongamma-L-Glutamyl-L-pipecolic acid, also known as g-L-glutamyl-L-pipecolate, belongs to the class of organic compounds known as dipeptides. These are organic compounds containing a sequence of exactly two alpha-amino acids joined by a peptide bond. gamma-L-Glutamyl-L-pipecolic acid has been detected, but not quantified in, green vegetables. This could make gamma-L-glutamyl-L-pipecolic acid a potential biomarker for the consumption of these foods. Based on a literature review very few articles have been published on gamma-L-Glutamyl-L-pipecolic acid.
Structure
Data?1563863227
Synonyms
ValueSource
g-L-Glutamyl-L-pipecolateGenerator
g-L-Glutamyl-L-pipecolic acidGenerator
gamma-L-Glutamyl-L-pipecolateGenerator
Γ-L-glutamyl-L-pipecolateGenerator
Γ-L-glutamyl-L-pipecolic acidGenerator
1-(4-Amino-4-carboxybutanoyl)piperidine-2-carboxylateGenerator
Chemical FormulaC11H18N2O5
Average Molecular Weight258.271
Monoisotopic Molecular Weight258.121571696
IUPAC Name1-(4-amino-4-carboxybutanoyl)piperidine-2-carboxylic acid
Traditional Name1-(4-amino-4-carboxybutanoyl)piperidine-2-carboxylic acid
CAS Registry NumberNot Available
SMILES
NC(CCC(=O)N1CCCCC1C(O)=O)C(O)=O
InChI Identifier
InChI=1S/C11H18N2O5/c12-7(10(15)16)4-5-9(14)13-6-2-1-3-8(13)11(17)18/h7-8H,1-6,12H2,(H,15,16)(H,17,18)
InChI KeyMNEBDCWSYIPUDZ-UHFFFAOYSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as dipeptides. These are organic compounds containing a sequence of exactly two alpha-amino acids joined by a peptide bond.
KingdomOrganic compounds
Super ClassOrganic acids and derivatives
ClassCarboxylic acids and derivatives
Sub ClassAmino acids, peptides, and analogues
Direct ParentDipeptides
Alternative Parents
Substituents
  • Alpha-dipeptide
  • Gamma-glutamyl alpha-amino acid
  • Glutamine or derivatives
  • Alpha-amino acid
  • Alpha-amino acid or derivatives
  • N-acyl-piperidine
  • Piperidinecarboxylic acid
  • Heterocyclic fatty acid
  • Dicarboxylic acid or derivatives
  • Fatty acyl
  • Fatty acid
  • Piperidine
  • Tertiary carboxylic acid amide
  • Amino acid or derivatives
  • Carboxamide group
  • Amino acid
  • Carboxylic acid
  • Azacycle
  • Organoheterocyclic compound
  • Primary aliphatic amine
  • Organic oxygen compound
  • Organic nitrogen compound
  • Hydrocarbon derivative
  • Organic oxide
  • Carbonyl group
  • Organopnictogen compound
  • Amine
  • Primary amine
  • Organonitrogen compound
  • Organooxygen compound
  • Aliphatic heteromonocyclic compound
Molecular FrameworkAliphatic heteromonocyclic compounds
External DescriptorsNot Available
Ontology
Physiological effectNot Available
Disposition
ProcessNot Available
Role
Physical Properties
StateNot Available
Experimental Molecular Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
Water Solubility17 g/LALOGPS
logP-2.9ALOGPS
logP-3.1ChemAxon
logS-1.2ALOGPS
pKa (Strongest Acidic)2.04ChemAxon
pKa (Strongest Basic)9.31ChemAxon
Physiological Charge-1ChemAxon
Hydrogen Acceptor Count6ChemAxon
Hydrogen Donor Count3ChemAxon
Polar Surface Area120.93 ŲChemAxon
Rotatable Bond Count5ChemAxon
Refractivity60.88 m³·mol⁻¹ChemAxon
Polarizability25.98 ųChemAxon
Number of Rings1ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DarkChem[M+H]+159.57631661259
DarkChem[M-H]-153.97431661259
DeepCCS[M+H]+155.60930932474
DeepCCS[M-H]-152.96530932474
DeepCCS[M-2H]-188.23830932474
DeepCCS[M+Na]+164.08930932474
AllCCS[M+H]+156.632859911
AllCCS[M+H-H2O]+153.332859911
AllCCS[M+NH4]+159.732859911
AllCCS[M+Na]+160.632859911
AllCCS[M-H]-158.132859911
AllCCS[M+Na-2H]-158.232859911
AllCCS[M+HCOO]-158.432859911

Predicted Kovats Retention Indices

Underivatized

MetaboliteSMILESKovats RI ValueColumn TypeReference
gamma-L-Glutamyl-L-pipecolic acidNC(CCC(=O)N1CCCCC1C(O)=O)C(O)=O3243.4Standard polar33892256
gamma-L-Glutamyl-L-pipecolic acidNC(CCC(=O)N1CCCCC1C(O)=O)C(O)=O2060.1Standard non polar33892256
gamma-L-Glutamyl-L-pipecolic acidNC(CCC(=O)N1CCCCC1C(O)=O)C(O)=O2493.3Semi standard non polar33892256

Derivatized

Derivative Name / StructureSMILESKovats RI ValueColumn TypeReference
gamma-L-Glutamyl-L-pipecolic acid,1TMS,isomer #1C[Si](C)(C)OC(=O)C1CCCCN1C(=O)CCC(N)C(=O)O2326.8Semi standard non polar33892256
gamma-L-Glutamyl-L-pipecolic acid,1TMS,isomer #2C[Si](C)(C)OC(=O)C(N)CCC(=O)N1CCCCC1C(=O)O2320.3Semi standard non polar33892256
gamma-L-Glutamyl-L-pipecolic acid,1TMS,isomer #3C[Si](C)(C)NC(CCC(=O)N1CCCCC1C(=O)O)C(=O)O2385.6Semi standard non polar33892256
gamma-L-Glutamyl-L-pipecolic acid,2TMS,isomer #1C[Si](C)(C)OC(=O)C(N)CCC(=O)N1CCCCC1C(=O)O[Si](C)(C)C2312.0Semi standard non polar33892256
gamma-L-Glutamyl-L-pipecolic acid,2TMS,isomer #2C[Si](C)(C)NC(CCC(=O)N1CCCCC1C(=O)O[Si](C)(C)C)C(=O)O2376.4Semi standard non polar33892256
gamma-L-Glutamyl-L-pipecolic acid,2TMS,isomer #3C[Si](C)(C)NC(CCC(=O)N1CCCCC1C(=O)O)C(=O)O[Si](C)(C)C2387.5Semi standard non polar33892256
gamma-L-Glutamyl-L-pipecolic acid,2TMS,isomer #4C[Si](C)(C)N(C(CCC(=O)N1CCCCC1C(=O)O)C(=O)O)[Si](C)(C)C2506.2Semi standard non polar33892256
gamma-L-Glutamyl-L-pipecolic acid,3TMS,isomer #1C[Si](C)(C)NC(CCC(=O)N1CCCCC1C(=O)O[Si](C)(C)C)C(=O)O[Si](C)(C)C2371.1Semi standard non polar33892256
gamma-L-Glutamyl-L-pipecolic acid,3TMS,isomer #1C[Si](C)(C)NC(CCC(=O)N1CCCCC1C(=O)O[Si](C)(C)C)C(=O)O[Si](C)(C)C2362.3Standard non polar33892256
gamma-L-Glutamyl-L-pipecolic acid,3TMS,isomer #2C[Si](C)(C)OC(=O)C1CCCCN1C(=O)CCC(C(=O)O)N([Si](C)(C)C)[Si](C)(C)C2509.9Semi standard non polar33892256
gamma-L-Glutamyl-L-pipecolic acid,3TMS,isomer #2C[Si](C)(C)OC(=O)C1CCCCN1C(=O)CCC(C(=O)O)N([Si](C)(C)C)[Si](C)(C)C2436.3Standard non polar33892256
gamma-L-Glutamyl-L-pipecolic acid,3TMS,isomer #3C[Si](C)(C)OC(=O)C(CCC(=O)N1CCCCC1C(=O)O)N([Si](C)(C)C)[Si](C)(C)C2511.6Semi standard non polar33892256
gamma-L-Glutamyl-L-pipecolic acid,3TMS,isomer #3C[Si](C)(C)OC(=O)C(CCC(=O)N1CCCCC1C(=O)O)N([Si](C)(C)C)[Si](C)(C)C2429.0Standard non polar33892256
gamma-L-Glutamyl-L-pipecolic acid,4TMS,isomer #1C[Si](C)(C)OC(=O)C1CCCCN1C(=O)CCC(C(=O)O[Si](C)(C)C)N([Si](C)(C)C)[Si](C)(C)C2516.6Semi standard non polar33892256
gamma-L-Glutamyl-L-pipecolic acid,4TMS,isomer #1C[Si](C)(C)OC(=O)C1CCCCN1C(=O)CCC(C(=O)O[Si](C)(C)C)N([Si](C)(C)C)[Si](C)(C)C2474.7Standard non polar33892256
gamma-L-Glutamyl-L-pipecolic acid,1TBDMS,isomer #1CC(C)(C)[Si](C)(C)OC(=O)C1CCCCN1C(=O)CCC(N)C(=O)O2580.5Semi standard non polar33892256
gamma-L-Glutamyl-L-pipecolic acid,1TBDMS,isomer #2CC(C)(C)[Si](C)(C)OC(=O)C(N)CCC(=O)N1CCCCC1C(=O)O2576.6Semi standard non polar33892256
gamma-L-Glutamyl-L-pipecolic acid,1TBDMS,isomer #3CC(C)(C)[Si](C)(C)NC(CCC(=O)N1CCCCC1C(=O)O)C(=O)O2635.1Semi standard non polar33892256
gamma-L-Glutamyl-L-pipecolic acid,2TBDMS,isomer #1CC(C)(C)[Si](C)(C)OC(=O)C(N)CCC(=O)N1CCCCC1C(=O)O[Si](C)(C)C(C)(C)C2765.1Semi standard non polar33892256
gamma-L-Glutamyl-L-pipecolic acid,2TBDMS,isomer #2CC(C)(C)[Si](C)(C)NC(CCC(=O)N1CCCCC1C(=O)O[Si](C)(C)C(C)(C)C)C(=O)O2846.5Semi standard non polar33892256
gamma-L-Glutamyl-L-pipecolic acid,2TBDMS,isomer #3CC(C)(C)[Si](C)(C)NC(CCC(=O)N1CCCCC1C(=O)O)C(=O)O[Si](C)(C)C(C)(C)C2853.8Semi standard non polar33892256
gamma-L-Glutamyl-L-pipecolic acid,2TBDMS,isomer #4CC(C)(C)[Si](C)(C)N(C(CCC(=O)N1CCCCC1C(=O)O)C(=O)O)[Si](C)(C)C(C)(C)C2967.8Semi standard non polar33892256
gamma-L-Glutamyl-L-pipecolic acid,3TBDMS,isomer #1CC(C)(C)[Si](C)(C)NC(CCC(=O)N1CCCCC1C(=O)O[Si](C)(C)C(C)(C)C)C(=O)O[Si](C)(C)C(C)(C)C3018.4Semi standard non polar33892256
gamma-L-Glutamyl-L-pipecolic acid,3TBDMS,isomer #1CC(C)(C)[Si](C)(C)NC(CCC(=O)N1CCCCC1C(=O)O[Si](C)(C)C(C)(C)C)C(=O)O[Si](C)(C)C(C)(C)C2935.6Standard non polar33892256
gamma-L-Glutamyl-L-pipecolic acid,3TBDMS,isomer #2CC(C)(C)[Si](C)(C)OC(=O)C1CCCCN1C(=O)CCC(C(=O)O)N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C3189.6Semi standard non polar33892256
gamma-L-Glutamyl-L-pipecolic acid,3TBDMS,isomer #2CC(C)(C)[Si](C)(C)OC(=O)C1CCCCN1C(=O)CCC(C(=O)O)N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C2990.3Standard non polar33892256
gamma-L-Glutamyl-L-pipecolic acid,3TBDMS,isomer #3CC(C)(C)[Si](C)(C)OC(=O)C(CCC(=O)N1CCCCC1C(=O)O)N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C3222.1Semi standard non polar33892256
gamma-L-Glutamyl-L-pipecolic acid,3TBDMS,isomer #3CC(C)(C)[Si](C)(C)OC(=O)C(CCC(=O)N1CCCCC1C(=O)O)N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C3018.2Standard non polar33892256
gamma-L-Glutamyl-L-pipecolic acid,4TBDMS,isomer #1CC(C)(C)[Si](C)(C)OC(=O)C1CCCCN1C(=O)CCC(C(=O)O[Si](C)(C)C(C)(C)C)N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C3393.5Semi standard non polar33892256
gamma-L-Glutamyl-L-pipecolic acid,4TBDMS,isomer #1CC(C)(C)[Si](C)(C)OC(=O)C1CCCCN1C(=O)CCC(C(=O)O[Si](C)(C)C(C)(C)C)N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C3209.7Standard non polar33892256
Spectra

GC-MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted GC-MSPredicted GC-MS Spectrum - gamma-L-Glutamyl-L-pipecolic acid GC-MS (Non-derivatized) - 70eV, Positivesplash10-02bf-9430000000-27e1c9d24fd0ba2e4e352017-09-01Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - gamma-L-Glutamyl-L-pipecolic acid GC-MS (2 TMS) - 70eV, Positivesplash10-00n0-7491000000-2abaa5937e009d2c9b522017-10-06Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - gamma-L-Glutamyl-L-pipecolic acid GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - gamma-L-Glutamyl-L-pipecolic acid 10V, Negative-QTOFsplash10-0bt9-0290000000-be81e9ef62a9c1d3f6f22016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - gamma-L-Glutamyl-L-pipecolic acid 20V, Negative-QTOFsplash10-03fr-3980000000-742741e2b5700920d3bd2016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - gamma-L-Glutamyl-L-pipecolic acid 40V, Negative-QTOFsplash10-001l-9700000000-1922eeec95820654479e2016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - gamma-L-Glutamyl-L-pipecolic acid 10V, Negative-QTOFsplash10-002r-0890000000-28abcdf27cae21d8bc412021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - gamma-L-Glutamyl-L-pipecolic acid 20V, Negative-QTOFsplash10-004i-2910000000-7e842f1db0df144160bc2021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - gamma-L-Glutamyl-L-pipecolic acid 40V, Negative-QTOFsplash10-01t9-5900000000-e89ff87cbcb9d2b62bea2021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - gamma-L-Glutamyl-L-pipecolic acid 10V, Positive-QTOFsplash10-08fr-0490000000-13b9a4f079afc7e495fe2016-06-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - gamma-L-Glutamyl-L-pipecolic acid 20V, Positive-QTOFsplash10-03ea-3950000000-c348f2a015f74af016622016-06-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - gamma-L-Glutamyl-L-pipecolic acid 40V, Positive-QTOFsplash10-053r-9500000000-9b2f1bbe09f76d62a52f2016-06-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - gamma-L-Glutamyl-L-pipecolic acid 10V, Positive-QTOFsplash10-0a4i-0190000000-eb1361ed45c731b030b32021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - gamma-L-Glutamyl-L-pipecolic acid 20V, Positive-QTOFsplash10-001i-7930000000-91c7aca764ddf3857ddc2021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - gamma-L-Glutamyl-L-pipecolic acid 40V, Positive-QTOFsplash10-001i-9200000000-e825f8acf2dd895cd8bc2021-09-22Wishart LabView Spectrum

NMR Spectra

Spectrum TypeDescriptionDeposition DateSourceView
Predicted 1D NMR13C NMR Spectrum (1D, 100 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 100 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 1000 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 1000 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 200 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 200 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 300 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 300 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 400 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 400 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 500 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 500 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 600 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 600 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 700 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 700 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 800 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 800 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 900 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 900 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Biological Properties
Cellular Locations
  • Cytoplasm
  • Extracellular
Biospecimen LocationsNot Available
Tissue LocationsNot Available
Pathways
Normal Concentrations
Not Available
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDFDB018008
KNApSAcK IDNot Available
Chemspider ID35014615
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound69247902
PDB IDNot Available
ChEBI ID173838
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDNot Available
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General References
  1. (). Yannai, Shmuel. (2004) Dictionary of food compounds with CD-ROM: Additives, flavors, and ingredients. Boca Raton: Chapman & Hall/CRC.. .