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Record Information
Version5.0
StatusExpected but not Quantified
Creation Date2012-09-12 01:54:57 UTC
Update Date2022-03-07 02:56:34 UTC
HMDB IDHMDB0040387
Secondary Accession Numbers
  • HMDB40387
Metabolite Identification
Common NameAcrimarine I
DescriptionAcrimarine I belongs to the class of organic compounds known as acridones. These are acridines containing a ketone group attached to the C9 carbon atom of the acridine moiety. Acrimarine I has been detected, but not quantified in, citrus. This could make acrimarine I a potential biomarker for the consumption of these foods. Based on a literature review very few articles have been published on Acrimarine I.
Structure
Data?1563863545
Synonyms
ValueSource
2-(4-oxo-4-Phenylbutyl)-1-indanoneHMDB
Chemical FormulaC34H31NO7
Average Molecular Weight565.6124
Monoisotopic Molecular Weight565.210052351
IUPAC Name6,11-dihydroxy-12-[1-(7-methoxy-2-oxo-2H-chromen-6-yl)-3-methylbut-2-en-1-yl]-2,2,5-trimethyl-5,10-dihydro-2H-1-oxa-5-azatetraphen-10-one
Traditional Name6,11-dihydroxy-12-[1-(7-methoxy-2-oxochromen-6-yl)-3-methylbut-2-en-1-yl]-2,2,5-trimethyl-1-oxa-5-azatetraphen-10-one
CAS Registry Number147395-89-9
SMILES
COC1=C(C=C2C=CC(=O)OC2=C1)C(C=C(C)C)C1=C(O)C2=C(N(C)C3=C(C=CC=C3O)C2=O)C2=C1OC(C)(C)C=C2
InChI Identifier
InChI=1S/C34H31NO7/c1-17(2)14-22(21-15-18-10-11-26(37)41-24(18)16-25(21)40-6)27-32(39)28-30(20-12-13-34(3,4)42-33(20)27)35(5)29-19(31(28)38)8-7-9-23(29)36/h7-16,22,36,39H,1-6H3
InChI KeyGSUYTELQWICLMF-UHFFFAOYSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as acridones. These are acridines containing a ketone group attached to the C9 carbon atom of the acridine moiety.
KingdomOrganic compounds
Super ClassOrganoheterocyclic compounds
ClassQuinolines and derivatives
Sub ClassBenzoquinolines
Direct ParentAcridones
Alternative Parents
Substituents
  • Acridone
  • Chromenopyridine
  • 2,2-dimethyl-1-benzopyran
  • Coumarin
  • Dihydroquinolone
  • 8-hydroxyquinoline
  • Benzopyran
  • Dihydroquinoline
  • 1-benzopyran
  • Anisole
  • 1-hydroxy-4-unsubstituted benzenoid
  • 1-hydroxy-2-unsubstituted benzenoid
  • Alkyl aryl ether
  • Pyranone
  • Pyridine
  • Pyran
  • Benzenoid
  • Vinylogous amide
  • Vinylogous acid
  • Heteroaromatic compound
  • Lactone
  • Azacycle
  • Ether
  • Oxacycle
  • Organic oxide
  • Organic oxygen compound
  • Organonitrogen compound
  • Hydrocarbon derivative
  • Organic nitrogen compound
  • Organooxygen compound
  • Organopnictogen compound
  • Aromatic heteropolycyclic compound
Molecular FrameworkAromatic heteropolycyclic compounds
External DescriptorsNot Available
Ontology
Physiological effectNot Available
Disposition
ProcessNot Available
Role
Physical Properties
StateNot Available
Experimental Molecular Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
Water Solubility0.0016 g/LALOGPS
logP5.52ALOGPS
logP6.87ChemAxon
logS-5.6ALOGPS
pKa (Strongest Acidic)9.1ChemAxon
pKa (Strongest Basic)-4.2ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count7ChemAxon
Hydrogen Donor Count2ChemAxon
Polar Surface Area105.53 ŲChemAxon
Rotatable Bond Count4ChemAxon
Refractivity163.15 m³·mol⁻¹ChemAxon
Polarizability60.66 ųChemAxon
Number of Rings6ChemAxon
BioavailabilityNoChemAxon
Rule of FiveNoChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DarkChem[M+H]+231.04631661259
DarkChem[M-H]-228.70431661259
DeepCCS[M+H]+229.95630932474
DeepCCS[M-H]-228.05330932474
DeepCCS[M-2H]-261.29430932474
DeepCCS[M+Na]+235.69630932474
AllCCS[M+H]+234.432859911
AllCCS[M+H-H2O]+232.632859911
AllCCS[M+NH4]+236.032859911
AllCCS[M+Na]+236.532859911
AllCCS[M-H]-221.132859911
AllCCS[M+Na-2H]-221.932859911
AllCCS[M+HCOO]-223.032859911

Predicted Kovats Retention Indices

Underivatized

MetaboliteSMILESKovats RI ValueColumn TypeReference
Acrimarine ICOC1=C(C=C2C=CC(=O)OC2=C1)C(C=C(C)C)C1=C(O)C2=C(N(C)C3=C(C=CC=C3O)C2=O)C2=C1OC(C)(C)C=C25982.4Standard polar33892256
Acrimarine ICOC1=C(C=C2C=CC(=O)OC2=C1)C(C=C(C)C)C1=C(O)C2=C(N(C)C3=C(C=CC=C3O)C2=O)C2=C1OC(C)(C)C=C23675.0Standard non polar33892256
Acrimarine ICOC1=C(C=C2C=CC(=O)OC2=C1)C(C=C(C)C)C1=C(O)C2=C(N(C)C3=C(C=CC=C3O)C2=O)C2=C1OC(C)(C)C=C24821.8Semi standard non polar33892256

Derivatized

Derivative Name / StructureSMILESKovats RI ValueColumn TypeReference
Acrimarine I,1TMS,isomer #1COC1=CC2=C(C=CC(=O)O2)C=C1C(C=C(C)C)C1=C2OC(C)(C)C=CC2=C2C(=C1O[Si](C)(C)C)C(=O)C1=CC=CC(O)=C1N2C4693.6Semi standard non polar33892256
Acrimarine I,1TMS,isomer #2COC1=CC2=C(C=CC(=O)O2)C=C1C(C=C(C)C)C1=C2OC(C)(C)C=CC2=C2C(=C1O)C(=O)C1=CC=CC(O[Si](C)(C)C)=C1N2C4652.5Semi standard non polar33892256
Acrimarine I,2TMS,isomer #1COC1=CC2=C(C=CC(=O)O2)C=C1C(C=C(C)C)C1=C2OC(C)(C)C=CC2=C2C(=C1O[Si](C)(C)C)C(=O)C1=CC=CC(O[Si](C)(C)C)=C1N2C4518.1Semi standard non polar33892256
Acrimarine I,1TBDMS,isomer #1COC1=CC2=C(C=CC(=O)O2)C=C1C(C=C(C)C)C1=C2OC(C)(C)C=CC2=C2C(=C1O[Si](C)(C)C(C)(C)C)C(=O)C1=CC=CC(O)=C1N2C4911.0Semi standard non polar33892256
Acrimarine I,1TBDMS,isomer #2COC1=CC2=C(C=CC(=O)O2)C=C1C(C=C(C)C)C1=C2OC(C)(C)C=CC2=C2C(=C1O)C(=O)C1=CC=CC(O[Si](C)(C)C(C)(C)C)=C1N2C4864.1Semi standard non polar33892256
Acrimarine I,2TBDMS,isomer #1COC1=CC2=C(C=CC(=O)O2)C=C1C(C=C(C)C)C1=C2OC(C)(C)C=CC2=C2C(=C1O[Si](C)(C)C(C)(C)C)C(=O)C1=CC=CC(O[Si](C)(C)C(C)(C)C)=C1N2C4919.7Semi standard non polar33892256
Spectra

GC-MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted GC-MSPredicted GC-MS Spectrum - Acrimarine I GC-MS (Non-derivatized) - 70eV, Positivesplash10-0udu-1011090000-68781250e6342d838c682017-09-01Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Acrimarine I GC-MS (1 TMS) - 70eV, Positivesplash10-00di-3040249000-0441578e82848c7ba9452017-10-06Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Acrimarine I GC-MS ("Acrimarine I,1TMS,#1" TMS) - 70eV, PositiveNot Available2021-10-14Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Acrimarine I GC-MS (TMS_1_2) - 70eV, PositiveNot Available2021-10-15Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Acrimarine I GC-MS (TMS_2_1) - 70eV, PositiveNot Available2021-10-15Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Acrimarine I GC-MS (TBDMS_1_1) - 70eV, PositiveNot Available2021-10-15Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Acrimarine I GC-MS (TBDMS_1_2) - 70eV, PositiveNot Available2021-10-15Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Acrimarine I GC-MS (TBDMS_2_1) - 70eV, PositiveNot Available2021-10-15Wishart LabView Spectrum

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Acrimarine I 10V, Positive-QTOFsplash10-014i-0000090000-c109c46f1ec50a9f2b8a2017-09-01Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Acrimarine I 20V, Positive-QTOFsplash10-0avj-2000190000-080b074d4e9ca7d721e82017-09-01Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Acrimarine I 40V, Positive-QTOFsplash10-0api-6004970000-f1ee0847587942bcd4bc2017-09-01Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Acrimarine I 10V, Negative-QTOFsplash10-03di-0000090000-0a6f54a90087f2d3b9572017-09-01Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Acrimarine I 20V, Negative-QTOFsplash10-0229-0103090000-6966811856c705da496e2017-09-01Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Acrimarine I 40V, Negative-QTOFsplash10-00aj-2514890000-603c207997643146a21a2017-09-01Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Acrimarine I 10V, Positive-QTOFsplash10-014i-0203090000-c6bfec69f2d1e9fa44e52021-09-25Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Acrimarine I 20V, Positive-QTOFsplash10-00xr-0102090000-53b1df7fca22da2932bd2021-09-25Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Acrimarine I 40V, Positive-QTOFsplash10-008j-0416090000-cc3c50cc19c4714634592021-09-25Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Acrimarine I 10V, Negative-QTOFsplash10-03di-0001090000-d0c864898870d60a45e32021-09-25Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Acrimarine I 20V, Negative-QTOFsplash10-03k9-0105090000-2b86be63c9ef0a647b192021-09-25Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Acrimarine I 40V, Negative-QTOFsplash10-05ai-0925180000-3e41662dc59e9159cafc2021-09-25Wishart LabView Spectrum
Biological Properties
Cellular Locations
  • Membrane
Biospecimen LocationsNot Available
Tissue LocationsNot Available
Pathways
Normal Concentrations
Not Available
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDFDB020119
KNApSAcK IDC00052075
Chemspider ID35014941
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound102145465
PDB IDNot Available
ChEBI IDNot Available
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDNot Available
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General References
  1. (). Yannai, Shmuel. (2004) Dictionary of food compounds with CD-ROM: Additives, flavors, and ingredients. Boca Raton: Chapman & Hall/CRC.. .