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Record Information

Version

5.0

Status

Expected but not Quantified

Creation Date

2012-09-12 02:14:01 UTC

Update Date

2022-03-07 02:56:41 UTC

HMDB ID

HMDB0040664

Secondary Accession Numbers

HMDB40664

Metabolite Identification

Common Name

Veranisatin B

Description

Veranisatin B belongs to the class of organic compounds known as terpene lactones. These are prenol lipids containing a lactone ring. Based on a literature review a significant number of articles have been published on Veranisatin B.

Structure

MOL 3D MOL SDF 3D SDF PDB 3D PDB SMILES InChI

HMDB0040664
     RDKit          3D
Veranisatin B
 45 48  0  0  0  0  0  0  0  0999 V2000
    5.1433    0.3736    0.7236 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.9701    0.4932   -0.0513 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.6982    0.3221    0.4150 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.5555    0.0334    1.6389 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.4935    0.4646   -0.4665 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.9751    0.7862   -1.7591 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.7408    1.6631    0.0012 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4157    1.3356    0.8631 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3627    0.3924    0.1060 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3911   -0.0438    1.0549 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.7255    0.5658    1.0406 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5339   -1.5673    0.8806 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0254   -1.8822    0.8475 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6438   -0.8813   -0.2601 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3353   -1.4018   -1.3841 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.7823   -0.8071   -0.5103 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.5328   -1.9603    0.1726 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.1207   -2.7548   -0.9059 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.2001   -1.6252   -1.7073 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4733   -1.3036   -2.8727 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.8000    1.0486   -1.1621 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.1293    1.4378   -1.1788 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9894    2.2238   -1.5496 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4906    3.0608   -2.3269 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.2919    2.4397   -1.0948 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.0005   -0.3723    1.5532 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.4801    1.3529    1.1056 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.9413   -0.0110    0.0508 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.8366    0.3223   -1.8502 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.4190    2.3503    0.5888 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9648    2.2141    1.1880 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1143    0.7675    1.7782 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0018    0.0356    2.1180 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.3695    0.0933    0.2591 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.2388    0.2602    2.0054 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.7426    1.6534    1.0545 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0124   -2.0184    1.7498 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.9841   -1.8190   -0.0889 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8267   -2.9095    0.5598 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6425   -1.5687    1.8250 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7721   -1.4719   -2.1671 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.6443   -1.7954    0.1209 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.1737   -2.2210    1.1664 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7065    0.3489   -2.0505 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.2543    2.3757   -1.4817 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  1  0
  3  4  2  0
  3  5  1  0
  5  6  1  0
  5  7  1  0
  7  8  1  0
  8  9  1  0
  9 10  1  0
 10 11  1  0
 10 12  1  0
 12 13  1  0
 13 14  1  0
 14 15  1  0
 14 16  1  0
 16 17  1  0
 17 18  1  0
 18 19  1  0
 19 20  2  0
  9 21  1  0
 21 22  1  0
 21 23  1  0
 23 24  2  0
 23 25  1  0
 16  5  1  0
 25  7  1  0
 14  9  1  0
 19 16  1  0
  1 26  1  0
  1 27  1  0
  1 28  1  0
  6 29  1  0
  7 30  1  0
  8 31  1  0
  8 32  1  0
 10 33  1  0
 11 34  1  0
 11 35  1  0
 11 36  1  0
 12 37  1  0
 12 38  1  0
 13 39  1  0
 13 40  1  0
 15 41  1  0
 17 42  1  0
 17 43  1  0
 21 44  1  0
 22 45  1  0
M  END

  Mrv0541 05061312012D          

 25 28  0  0  0  0            999 V2000
   -0.3026    1.7516    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.3186   -2.8618    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.1531    1.7775    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.7555    1.2158    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.5241   -0.2111    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.4380    0.3189    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.4275    1.3732    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.5467   -0.9733    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3678    0.4284    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7917   -0.3219    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.4256   -0.8439    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.2482   -1.7827    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.5184    0.5225    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.8505   -0.2562    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.3958    0.4718    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4013   -0.9749    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8193    1.1157    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6130   -0.3601    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.4170   -1.6661    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.8712   -2.3193    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.2168    0.5162    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.8147   -1.3332    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.4718   -2.0539    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.0133   -0.2686    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3075   -1.0192    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  4  3  1  0  0  0  0
  7  1  1  0  0  0  0
  7  3  1  0  0  0  0
  8  5  1  0  0  0  0
 10  9  1  0  0  0  0
 13  5  1  0  0  0  0
 13  7  1  0  0  0  0
 13  9  1  0  0  0  0
 14  6  1  0  0  0  0
 14 11  1  0  0  0  0
 15  4  1  0  0  0  0
 15 13  1  0  0  0  0
 15 14  1  0  0  0  0
 16  8  1  0  0  0  0
 16 12  1  0  0  0  0
 16 14  1  0  0  0  0
 17  9  1  0  0  0  0
 18 10  2  0  0  0  0
 19 11  2  0  0  0  0
 20 12  2  0  0  0  0
 21 15  1  0  0  0  0
 22 16  1  0  0  0  0
 23  2  1  0  0  0  0
 23 12  1  0  0  0  0
 24  6  1  0  0  0  0
 24 11  1  0  0  0  0
 25  8  1  0  0  0  0
 25 10  1  0  0  0  0
M  END
> <DATABASE_ID>
HMDB0040664

> <DATABASE_NAME>
hmdb

> <SMILES>
COC(=O)C1(O)C2CC3(C(C)CCC3(O)C11COC1=O)C(O)C(=O)O2

> <INCHI_IDENTIFIER>
InChI=1S/C16H20O9/c1-7-3-4-15(21)13(7)5-8(25-10(18)9(13)17)16(22,12(20)23-2)14(15)6-24-11(14)19/h7-9,17,21-22H,3-6H2,1-2H3

> <INCHI_KEY>
BPDHZCGFGOWILW-UHFFFAOYSA-N

> <FORMULA>
C16H20O9

> <MOLECULAR_WEIGHT>
356.3246

> <EXACT_MASS>
356.110732238

> <JCHEM_ACCEPTOR_COUNT>
6

> <JCHEM_AVERAGE_POLARIZABILITY>
32.35848070667916

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
3

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
0

> <JCHEM_IUPAC>
methyl 5',7',11'-trihydroxy-2'-methyl-4,10'-dioxo-9'-oxaspiro[oxetane-3,6'-tricyclo[6.3.1.0¹,⁵]dodecane]-7'-carboxylate

> <ALOGPS_LOGP>
-0.54

> <JCHEM_LOGP>
-1.4116249570000003

> <ALOGPS_LOGS>
-1.25

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
4

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA>
12.17789390051883

> <JCHEM_PKA_STRONGEST_ACIDIC>
10.712948988312338

> <JCHEM_PKA_STRONGEST_BASIC>
-3.466088983612128

> <JCHEM_POLAR_SURFACE_AREA>
139.59

> <JCHEM_REFRACTIVITY>
76.80609999999999

> <JCHEM_ROTATABLE_BOND_COUNT>
2

> <JCHEM_RULE_OF_FIVE>
1

> <ALOGPS_SOLUBILITY>
2.03e+01 g/l

> <JCHEM_TRADITIONAL_IUPAC>
methyl 5',7',11'-trihydroxy-2'-methyl-4,10'-dioxo-9'-oxaspiro[oxetane-3,6'-tricyclo[6.3.1.0¹,⁵]dodecane]-7'-carboxylate

> <JCHEM_VEBER_RULE>
0

$$$$

HMDB0040664
     RDKit          3D
Veranisatin B
 45 48  0  0  0  0  0  0  0  0999 V2000
    5.1433    0.3736    0.7236 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.9701    0.4932   -0.0513 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.6982    0.3221    0.4150 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.5555    0.0334    1.6389 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.4935    0.4646   -0.4665 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.9751    0.7862   -1.7591 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.7408    1.6631    0.0012 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4157    1.3356    0.8631 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3627    0.3924    0.1060 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3911   -0.0438    1.0549 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.7255    0.5658    1.0406 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5339   -1.5673    0.8806 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0254   -1.8822    0.8475 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6438   -0.8813   -0.2601 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3353   -1.4018   -1.3841 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.7823   -0.8071   -0.5103 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.5328   -1.9603    0.1726 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.1207   -2.7548   -0.9059 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.2001   -1.6252   -1.7073 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4733   -1.3036   -2.8727 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.8000    1.0486   -1.1621 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.1293    1.4378   -1.1788 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9894    2.2238   -1.5496 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4906    3.0608   -2.3269 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.2919    2.4397   -1.0948 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.0005   -0.3723    1.5532 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.4801    1.3529    1.1056 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.9413   -0.0110    0.0508 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.8366    0.3223   -1.8502 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.4190    2.3503    0.5888 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9648    2.2141    1.1880 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1143    0.7675    1.7782 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0018    0.0356    2.1180 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.3695    0.0933    0.2591 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.2388    0.2602    2.0054 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.7426    1.6534    1.0545 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0124   -2.0184    1.7498 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.9841   -1.8190   -0.0889 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8267   -2.9095    0.5598 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6425   -1.5687    1.8250 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7721   -1.4719   -2.1671 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.6443   -1.7954    0.1209 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.1737   -2.2210    1.1664 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7065    0.3489   -2.0505 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.2543    2.3757   -1.4817 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  1  0
  3  4  2  0
  3  5  1  0
  5  6  1  0
  5  7  1  0
  7  8  1  0
  8  9  1  0
  9 10  1  0
 10 11  1  0
 10 12  1  0
 12 13  1  0
 13 14  1  0
 14 15  1  0
 14 16  1  0
 16 17  1  0
 17 18  1  0
 18 19  1  0
 19 20  2  0
  9 21  1  0
 21 22  1  0
 21 23  1  0
 23 24  2  0
 23 25  1  0
 16  5  1  0
 25  7  1  0
 14  9  1  0
 19 16  1  0
  1 26  1  0
  1 27  1  0
  1 28  1  0
  6 29  1  0
  7 30  1  0
  8 31  1  0
  8 32  1  0
 10 33  1  0
 11 34  1  0
 11 35  1  0
 11 36  1  0
 12 37  1  0
 12 38  1  0
 13 39  1  0
 13 40  1  0
 15 41  1  0
 17 42  1  0
 17 43  1  0
 21 44  1  0
 22 45  1  0
M  END

HEADER    PROTEIN                                 06-MAY-13   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   06-MAY-13         0                                  
HETATM    1  C   UNK     0      -0.565   3.270   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0       0.595  -5.342   0.000  0.00  0.00           C+0
HETATM    3  C   UNK     0       2.152   3.318   0.000  0.00  0.00           C+0
HETATM    4  C   UNK     0       3.277   2.269   0.000  0.00  0.00           C+0
HETATM    5  C   UNK     0       0.978  -0.394   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0       4.551   0.595   0.000  0.00  0.00           C+0
HETATM    7  C   UNK     0       0.798   2.563   0.000  0.00  0.00           C+0
HETATM    8  C   UNK     0       1.020  -1.817   0.000  0.00  0.00           C+0
HETATM    9  C   UNK     0      -0.687   0.800   0.000  0.00  0.00           C+0
HETATM   10  C   UNK     0      -1.478  -0.601   0.000  0.00  0.00           C+0
HETATM   11  C   UNK     0       4.528  -1.575   0.000  0.00  0.00           C+0
HETATM   12  C   UNK     0       2.330  -3.328   0.000  0.00  0.00           C+0
HETATM   13  C   UNK     0       0.968   0.975   0.000  0.00  0.00           C+0
HETATM   14  C   UNK     0       3.454  -0.478   0.000  0.00  0.00           C+0
HETATM   15  C   UNK     0       2.605   0.881   0.000  0.00  0.00           C+0
HETATM   16  C   UNK     0       2.616  -1.820   0.000  0.00  0.00           C+0
HETATM   17  O   UNK     0      -1.529   2.083   0.000  0.00  0.00           O+0
HETATM   18  O   UNK     0      -3.011  -0.672   0.000  0.00  0.00           O+0
HETATM   19  O   UNK     0       4.512  -3.110   0.000  0.00  0.00           O+0
HETATM   20  O   UNK     0       3.493  -4.329   0.000  0.00  0.00           O+0
HETATM   21  O   UNK     0       4.138   0.964   0.000  0.00  0.00           O+0
HETATM   22  O   UNK     0       3.387  -2.489   0.000  0.00  0.00           O+0
HETATM   23  O   UNK     0       0.881  -3.834   0.000  0.00  0.00           O+0
HETATM   24  O   UNK     0       5.625  -0.501   0.000  0.00  0.00           O+0
HETATM   25  O   UNK     0      -0.574  -1.903   0.000  0.00  0.00           O+0
CONECT    1    7                                                            
CONECT    2   23                                                            
CONECT    3    4    7                                                       
CONECT    4    3   15                                                       
CONECT    5    8   13                                                       
CONECT    6   14   24                                                       
CONECT    7    1    3   13                                                  
CONECT    8    5   16   25                                                  
CONECT    9   10   13   17                                                  
CONECT   10    9   18   25                                                  
CONECT   11   14   19   24                                                  
CONECT   12   16   20   23                                                  
CONECT   13    5    7    9   15                                             
CONECT   14    6   11   15   16                                             
CONECT   15    4   13   14   21                                             
CONECT   16    8   12   14   22                                             
CONECT   17    9                                                            
CONECT   18   10                                                            
CONECT   19   11                                                            
CONECT   20   12                                                            
CONECT   21   15                                                            
CONECT   22   16                                                            
CONECT   23    2   12                                                       
CONECT   24    6   11                                                       
CONECT   25    8   10                                                       
MASTER        0    0    0    0    0    0    0    0   25    0   56    0
END

COMPND    HMDB0040664
HETATM    1  C1  UNL     1       5.143   0.374   0.724  1.00  0.00           C  
HETATM    2  O1  UNL     1       3.970   0.493  -0.051  1.00  0.00           O  
HETATM    3  C2  UNL     1       2.698   0.322   0.415  1.00  0.00           C  
HETATM    4  O2  UNL     1       2.556   0.033   1.639  1.00  0.00           O  
HETATM    5  C3  UNL     1       1.493   0.465  -0.466  1.00  0.00           C  
HETATM    6  O3  UNL     1       1.975   0.786  -1.759  1.00  0.00           O  
HETATM    7  C4  UNL     1       0.741   1.663   0.001  1.00  0.00           C  
HETATM    8  C5  UNL     1      -0.416   1.336   0.863  1.00  0.00           C  
HETATM    9  C6  UNL     1      -1.363   0.392   0.106  1.00  0.00           C  
HETATM   10  C7  UNL     1      -2.391  -0.044   1.055  1.00  0.00           C  
HETATM   11  C8  UNL     1      -3.725   0.566   1.041  1.00  0.00           C  
HETATM   12  C9  UNL     1      -2.534  -1.567   0.881  1.00  0.00           C  
HETATM   13  C10 UNL     1      -1.025  -1.882   0.848  1.00  0.00           C  
HETATM   14  C11 UNL     1      -0.644  -0.881  -0.260  1.00  0.00           C  
HETATM   15  O4  UNL     1      -1.335  -1.402  -1.384  1.00  0.00           O  
HETATM   16  C12 UNL     1       0.782  -0.807  -0.510  1.00  0.00           C  
HETATM   17  C13 UNL     1       1.533  -1.960   0.173  1.00  0.00           C  
HETATM   18  O5  UNL     1       1.121  -2.755  -0.906  1.00  0.00           O  
HETATM   19  C14 UNL     1       1.200  -1.625  -1.707  1.00  0.00           C  
HETATM   20  O6  UNL     1       1.473  -1.304  -2.873  1.00  0.00           O  
HETATM   21  C15 UNL     1      -1.800   1.049  -1.162  1.00  0.00           C  
HETATM   22  O7  UNL     1      -3.129   1.438  -1.179  1.00  0.00           O  
HETATM   23  C16 UNL     1      -0.989   2.224  -1.550  1.00  0.00           C  
HETATM   24  O8  UNL     1      -1.491   3.061  -2.327  1.00  0.00           O  
HETATM   25  O9  UNL     1       0.292   2.440  -1.095  1.00  0.00           O  
HETATM   26  H1  UNL     1       5.001  -0.372   1.553  1.00  0.00           H  
HETATM   27  H2  UNL     1       5.480   1.353   1.106  1.00  0.00           H  
HETATM   28  H3  UNL     1       5.941  -0.011   0.051  1.00  0.00           H  
HETATM   29  H4  UNL     1       2.837   0.322  -1.850  1.00  0.00           H  
HETATM   30  H5  UNL     1       1.419   2.350   0.589  1.00  0.00           H  
HETATM   31  H6  UNL     1      -0.965   2.214   1.188  1.00  0.00           H  
HETATM   32  H7  UNL     1      -0.114   0.768   1.778  1.00  0.00           H  
HETATM   33  H8  UNL     1      -2.002   0.036   2.118  1.00  0.00           H  
HETATM   34  H9  UNL     1      -4.370   0.093   0.259  1.00  0.00           H  
HETATM   35  H10 UNL     1      -4.239   0.260   2.005  1.00  0.00           H  
HETATM   36  H11 UNL     1      -3.743   1.653   1.054  1.00  0.00           H  
HETATM   37  H12 UNL     1      -3.012  -2.018   1.750  1.00  0.00           H  
HETATM   38  H13 UNL     1      -2.984  -1.819  -0.089  1.00  0.00           H  
HETATM   39  H14 UNL     1      -0.827  -2.909   0.560  1.00  0.00           H  
HETATM   40  H15 UNL     1      -0.642  -1.569   1.825  1.00  0.00           H  
HETATM   41  H16 UNL     1      -0.772  -1.472  -2.167  1.00  0.00           H  
HETATM   42  H17 UNL     1       2.644  -1.795   0.121  1.00  0.00           H  
HETATM   43  H18 UNL     1       1.174  -2.221   1.166  1.00  0.00           H  
HETATM   44  H19 UNL     1      -1.706   0.349  -2.051  1.00  0.00           H  
HETATM   45  H20 UNL     1      -3.254   2.376  -1.482  1.00  0.00           H  
CONECT    1    2   26   27   28
CONECT    2    3
CONECT    3    4    4    5
CONECT    5    6    7   16
CONECT    6   29
CONECT    7    8   25   30
CONECT    8    9   31   32
CONECT    9   10   14   21
CONECT   10   11   12   33
CONECT   11   34   35   36
CONECT   12   13   37   38
CONECT   13   14   39   40
CONECT   14   15   16
CONECT   15   41
CONECT   16   17   19
CONECT   17   18   42   43
CONECT   18   19
CONECT   19   20   20
CONECT   21   22   23   44
CONECT   22   45
CONECT   23   24   24   25
END

HMDB0040664
     RDKit          3D
Veranisatin B
 45 48  0  0  0  0  0  0  0  0999 V2000
    5.1433    0.3736    0.7236 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.9701    0.4932   -0.0513 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.6982    0.3221    0.4150 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.5555    0.0334    1.6389 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.4935    0.4646   -0.4665 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.9751    0.7862   -1.7591 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.7408    1.6631    0.0012 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4157    1.3356    0.8631 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3627    0.3924    0.1060 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3911   -0.0438    1.0549 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.7255    0.5658    1.0406 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5339   -1.5673    0.8806 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0254   -1.8822    0.8475 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6438   -0.8813   -0.2601 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3353   -1.4018   -1.3841 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.7823   -0.8071   -0.5103 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.5328   -1.9603    0.1726 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.1207   -2.7548   -0.9059 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.2001   -1.6252   -1.7073 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4733   -1.3036   -2.8727 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.8000    1.0486   -1.1621 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.1293    1.4378   -1.1788 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9894    2.2238   -1.5496 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4906    3.0608   -2.3269 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.2919    2.4397   -1.0948 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.0005   -0.3723    1.5532 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.4801    1.3529    1.1056 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.9413   -0.0110    0.0508 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.8366    0.3223   -1.8502 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.4190    2.3503    0.5888 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9648    2.2141    1.1880 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1143    0.7675    1.7782 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0018    0.0356    2.1180 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.3695    0.0933    0.2591 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.2388    0.2602    2.0054 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.7426    1.6534    1.0545 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0124   -2.0184    1.7498 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.9841   -1.8190   -0.0889 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8267   -2.9095    0.5598 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6425   -1.5687    1.8250 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7721   -1.4719   -2.1671 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.6443   -1.7954    0.1209 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.1737   -2.2210    1.1664 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7065    0.3489   -2.0505 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.2543    2.3757   -1.4817 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  1  0
  3  4  2  0
  3  5  1  0
  5  6  1  0
  5  7  1  0
  7  8  1  0
  8  9  1  0
  9 10  1  0
 10 11  1  0
 10 12  1  0
 12 13  1  0
 13 14  1  0
 14 15  1  0
 14 16  1  0
 16 17  1  0
 17 18  1  0
 18 19  1  0
 19 20  2  0
  9 21  1  0
 21 22  1  0
 21 23  1  0
 23 24  2  0
 23 25  1  0
 16  5  1  0
 25  7  1  0
 14  9  1  0
 19 16  1  0
  1 26  1  0
  1 27  1  0
  1 28  1  0
  6 29  1  0
  7 30  1  0
  8 31  1  0
  8 32  1  0
 10 33  1  0
 11 34  1  0
 11 35  1  0
 11 36  1  0
 12 37  1  0
 12 38  1  0
 13 39  1  0
 13 40  1  0
 15 41  1  0
 17 42  1  0
 17 43  1  0
 21 44  1  0
 22 45  1  0
M  END

View in JSmol View NMR Assignments View Stereo Labels

Synonyms

Value	Source
Methyl 5',7',11'-trihydroxy-2'-methyl-4,10'-dioxo-9'-oxaspiro[oxetane-3,6'-tricyclo[6.3.1.0¹,⁵]dodecane]-7'-carboxylic acid	HMDB
Veranisatin b	MeSH

Chemical Formula

C₁₆H₂₀O₉

Average Molecular Weight

356.3246

Monoisotopic Molecular Weight

356.110732238

IUPAC Name

methyl 5',7',11'-trihydroxy-2'-methyl-4,10'-dioxo-9'-oxaspiro[oxetane-3,6'-tricyclo[6.3.1.0¹,⁵]dodecane]-7'-carboxylate

Traditional Name

methyl 5',7',11'-trihydroxy-2'-methyl-4,10'-dioxo-9'-oxaspiro[oxetane-3,6'-tricyclo[6.3.1.0¹,⁵]dodecane]-7'-carboxylate

CAS Registry Number

153445-93-3

SMILES

COC(=O)C1(O)C2CC3(C(C)CCC3(O)C11COC1=O)C(O)C(=O)O2

InChI Identifier

InChI=1S/C16H20O9/c1-7-3-4-15(21)13(7)5-8(25-10(18)9(13)17)16(22,12(20)23-2)14(15)6-24-11(14)19/h7-9,17,21-22H,3-6H2,1-2H3

InChI Key

BPDHZCGFGOWILW-UHFFFAOYSA-N

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as terpene lactones. These are prenol lipids containing a lactone ring.

Kingdom

Organic compounds

Super Class

Lipids and lipid-like molecules

Class

Prenol lipids

Sub Class

Terpene lactones

Direct Parent

Terpene lactones

Alternative Parents

Substituents

Terpene lactone
Sesquiterpenoid
Prezizaane sesquiterpenoid
Tricarboxylic acid or derivatives
Delta valerolactone
Delta_valerolactone
Oxane
Beta_propiolactone
Cyclic alcohol
Methyl ester
Tertiary alcohol
Secondary alcohol
Oxetane
Lactone
Carboxylic acid ester
Polyol
Carboxylic acid derivative
Oxacycle
Organoheterocyclic compound
Hydrocarbon derivative
Organooxygen compound
Organic oxide
Organic oxygen compound
Alcohol
Carbonyl group
Aliphatic heteropolycyclic compound

Molecular Framework

Aliphatic heteropolycyclic compounds

External Descriptors

Not Available

Ontology

Physiological effect

Not Available

Disposition

Biological location

Cellular substructure

Route of exposure

Enteral

Ingestion (HMDB: HMDB0040664)

Source

Endogenous

Endogenous (HMDB: HMDB0040664)

Plant

Plant (HMDB: HMDB0040664)

Animal

Animal (HMDB: HMDB0040664)

Exogenous

Food

Food (HMDB: HMDB0040664)

Fruit

Fruits (FooDB: FOOD00871)

Exogenous (HMDB: HMDB0040664)

Process

Naturally occurring process

Biological process

Chemical reaction

Lipid Peroxidation (HMDB: HMDB0040664)

Biochemical pathway

Metabolic pathway

Fatty Acid Metabolism (HMDB: HMDB0040664)

Lipid metabolism pathway (HMDB: HMDB0040664)

Cellular process

Cell signaling (HMDB: HMDB0040664)

Biochemical process

Lipid transport (HMDB: HMDB0040664)

Role

Biological role

Energy source (HMDB: HMDB0040664)

Industrial application

Manufacturing industry

Material processing agent

Fluid processing agent

Surfactant

Surfactant (HMDB: HMDB0040664)

Physical Properties

State

Solid

Experimental Molecular Properties

Property	Value	Reference
Melting Point	212 - 213 °C	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Experimental Chromatographic Properties

Not Available

Predicted Molecular Properties

Property	Value	Source
Water Solubility	20.3 g/L	ALOGPS
logP	-0.54	ALOGPS
logP	-1.4	ChemAxon
logS	-1.2	ALOGPS
pKa (Strongest Acidic)	10.71	ChemAxon
pKa (Strongest Basic)	-3.5	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	6	ChemAxon
Hydrogen Donor Count	3	ChemAxon
Polar Surface Area	139.59 Å²	ChemAxon
Rotatable Bond Count	2	ChemAxon
Refractivity	76.81 m³·mol⁻¹	ChemAxon
Polarizability	32.36 Å³	ChemAxon
Number of Rings	4	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	Yes	ChemAxon
Ghose Filter	No	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

Predicted Chromatographic Properties

Predicted Collision Cross Sections

Predictor	Adduct Type	CCS Value (Å²)	Reference
DarkChem	[M+H]+	181.132	31661259
DarkChem	[M-H]-	175.308	31661259
DeepCCS	[M-2H]-	216.466	30932474
DeepCCS	[M+Na]+	191.694	30932474
AllCCS	[M+H]+	178.1	32859911
AllCCS	[M+H-H2O]+	175.2	32859911
AllCCS	[M+NH4]+	180.7	32859911
AllCCS	[M+Na]+	181.4	32859911
AllCCS	[M-H]-	182.1	32859911
AllCCS	[M+Na-2H]-	181.7	32859911
AllCCS	[M+HCOO]-	181.3	32859911

Predicted Kovats Retention Indices

Underivatized

Metabolite	SMILES	Kovats RI Value	Column Type	Reference
Veranisatin B	COC(=O)C1(O)C2CC3(C(C)CCC3(O)C11COC1=O)C(O)C(=O)O2	3970.4	Standard polar	33892256
Veranisatin B	COC(=O)C1(O)C2CC3(C(C)CCC3(O)C11COC1=O)C(O)C(=O)O2	2306.9	Standard non polar	33892256
Veranisatin B	COC(=O)C1(O)C2CC3(C(C)CCC3(O)C11COC1=O)C(O)C(=O)O2	2820.1	Semi standard non polar	33892256

Derivatized

Derivative Name / Structure	SMILES	Kovats RI Value	Column Type	Reference
Veranisatin B,1TMS,isomer #1	COC(=O)C1(O[Si](C)(C)C)C2CC3(C(C)CCC3(O)C13COC3=O)C(O)C(=O)O2	2725.9	Semi standard non polar	33892256
Veranisatin B,1TMS,isomer #2	COC(=O)C1(O)C2CC3(C(C)CCC3(O[Si](C)(C)C)C13COC3=O)C(O)C(=O)O2	2676.1	Semi standard non polar	33892256
Veranisatin B,1TMS,isomer #3	COC(=O)C1(O)C2CC3(C(C)CCC3(O)C13COC3=O)C(O[Si](C)(C)C)C(=O)O2	2676.0	Semi standard non polar	33892256
Veranisatin B,2TMS,isomer #1	COC(=O)C1(O[Si](C)(C)C)C2CC3(C(C)CCC3(O[Si](C)(C)C)C13COC3=O)C(O)C(=O)O2	2697.5	Semi standard non polar	33892256
Veranisatin B,2TMS,isomer #2	COC(=O)C1(O[Si](C)(C)C)C2CC3(C(C)CCC3(O)C13COC3=O)C(O[Si](C)(C)C)C(=O)O2	2691.7	Semi standard non polar	33892256
Veranisatin B,2TMS,isomer #3	COC(=O)C1(O)C2CC3(C(C)CCC3(O[Si](C)(C)C)C13COC3=O)C(O[Si](C)(C)C)C(=O)O2	2679.6	Semi standard non polar	33892256
Veranisatin B,3TMS,isomer #1	COC(=O)C1(O[Si](C)(C)C)C2CC3(C(C)CCC3(O[Si](C)(C)C)C13COC3=O)C(O[Si](C)(C)C)C(=O)O2	2698.3	Semi standard non polar	33892256
Veranisatin B,1TBDMS,isomer #1	COC(=O)C1(O[Si](C)(C)C(C)(C)C)C2CC3(C(C)CCC3(O)C13COC3=O)C(O)C(=O)O2	2990.4	Semi standard non polar	33892256
Veranisatin B,1TBDMS,isomer #2	COC(=O)C1(O)C2CC3(C(C)CCC3(O[Si](C)(C)C(C)(C)C)C13COC3=O)C(O)C(=O)O2	2918.0	Semi standard non polar	33892256
Veranisatin B,1TBDMS,isomer #3	COC(=O)C1(O)C2CC3(C(C)CCC3(O)C13COC3=O)C(O[Si](C)(C)C(C)(C)C)C(=O)O2	2916.2	Semi standard non polar	33892256
Veranisatin B,2TBDMS,isomer #1	COC(=O)C1(O[Si](C)(C)C(C)(C)C)C2CC3(C(C)CCC3(O[Si](C)(C)C(C)(C)C)C13COC3=O)C(O)C(=O)O2	3175.7	Semi standard non polar	33892256
Veranisatin B,2TBDMS,isomer #2	COC(=O)C1(O[Si](C)(C)C(C)(C)C)C2CC3(C(C)CCC3(O)C13COC3=O)C(O[Si](C)(C)C(C)(C)C)C(=O)O2	3157.9	Semi standard non polar	33892256
Veranisatin B,2TBDMS,isomer #3	COC(=O)C1(O)C2CC3(C(C)CCC3(O[Si](C)(C)C(C)(C)C)C13COC3=O)C(O[Si](C)(C)C(C)(C)C)C(=O)O2	3129.7	Semi standard non polar	33892256
Veranisatin B,3TBDMS,isomer #1	COC(=O)C1(O[Si](C)(C)C(C)(C)C)C2CC3(C(C)CCC3(O[Si](C)(C)C(C)(C)C)C13COC3=O)C(O[Si](C)(C)C(C)(C)C)C(=O)O2	3382.1	Semi standard non polar	33892256

Spectra

GC-MS Spectra

Spectrum Type	Description	Splash Key	Deposition Date	Source	View
Predicted GC-MS	Predicted GC-MS Spectrum - Veranisatin B GC-MS (Non-derivatized) - 70eV, Positive	splash10-01td-8269000000-919878ecc53492acb4be	2017-09-01	Wishart Lab	View Spectrum
Predicted GC-MS	Predicted GC-MS Spectrum - Veranisatin B GC-MS (3 TMS) - 70eV, Positive	splash10-03fr-2010190000-0d0a3a085dbe720f3ccd	2017-10-06	Wishart Lab	View Spectrum
Predicted GC-MS	Predicted GC-MS Spectrum - Veranisatin B GC-MS (Non-derivatized) - 70eV, Positive	Not Available	2021-10-12	Wishart Lab	View Spectrum

MS/MS Spectra

Spectrum Type	Description	Splash Key	Deposition Date	Source	View
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - Veranisatin B 10V, Positive-QTOF	splash10-06ri-0029000000-068666dbbfb81cb71f74	2015-04-24	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - Veranisatin B 20V, Positive-QTOF	splash10-0a4r-2039000000-640f441bd7e9d8b6c074	2015-04-24	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - Veranisatin B 40V, Positive-QTOF	splash10-0ufr-5091000000-bcb8aa32857e8517cc0e	2015-04-24	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - Veranisatin B 10V, Negative-QTOF	splash10-03di-0029000000-a9b65f71ed654e435af0	2015-04-25	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - Veranisatin B 20V, Negative-QTOF	splash10-08g0-0039000000-7298100b7b6ebc5020e8	2015-04-25	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - Veranisatin B 40V, Negative-QTOF	splash10-05n0-6090000000-7faa516d76e0c5621782	2015-04-25	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - Veranisatin B 10V, Positive-QTOF	splash10-0a4i-0009000000-792b5173b615b71f3276	2021-09-22	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - Veranisatin B 20V, Positive-QTOF	splash10-0a4i-2049000000-b84e0b91ab819bd659ba	2021-09-22	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - Veranisatin B 40V, Positive-QTOF	splash10-00b9-5139000000-2ee8f0c93bad8500ab89	2021-09-22	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - Veranisatin B 10V, Negative-QTOF	splash10-0a4i-0009000000-99e2854eee3658c543c9	2021-09-23	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - Veranisatin B 20V, Negative-QTOF	splash10-0002-1090000000-a911a6826b1f516eff6f	2021-09-23	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - Veranisatin B 40V, Negative-QTOF	splash10-00kb-5490000000-445d1e7292f759aa9388	2021-09-23	Wishart Lab	View Spectrum

NMR Spectra

Spectrum Type	Description	Deposition Date	Source	View
Predicted 1D NMR	¹³C NMR Spectrum (1D, 100 MHz, D₂O, predicted)	2021-09-24	Wishart Lab	View Spectrum
Predicted 1D NMR	¹H NMR Spectrum (1D, 100 MHz, D₂O, predicted)	2021-09-24	Wishart Lab	View Spectrum
Predicted 1D NMR	¹³C NMR Spectrum (1D, 1000 MHz, D₂O, predicted)	2021-09-24	Wishart Lab	View Spectrum
Predicted 1D NMR	¹H NMR Spectrum (1D, 1000 MHz, D₂O, predicted)	2021-09-24	Wishart Lab	View Spectrum
Predicted 1D NMR	¹³C NMR Spectrum (1D, 200 MHz, D₂O, predicted)	2021-09-24	Wishart Lab	View Spectrum
Predicted 1D NMR	¹H NMR Spectrum (1D, 200 MHz, D₂O, predicted)	2021-09-24	Wishart Lab	View Spectrum
Predicted 1D NMR	¹³C NMR Spectrum (1D, 300 MHz, D₂O, predicted)	2021-09-24	Wishart Lab	View Spectrum
Predicted 1D NMR	¹H NMR Spectrum (1D, 300 MHz, D₂O, predicted)	2021-09-24	Wishart Lab	View Spectrum
Predicted 1D NMR	¹³C NMR Spectrum (1D, 400 MHz, D₂O, predicted)	2021-09-24	Wishart Lab	View Spectrum
Predicted 1D NMR	¹H NMR Spectrum (1D, 400 MHz, D₂O, predicted)	2021-09-24	Wishart Lab	View Spectrum
Predicted 1D NMR	¹³C NMR Spectrum (1D, 500 MHz, D₂O, predicted)	2021-09-24	Wishart Lab	View Spectrum
Predicted 1D NMR	¹H NMR Spectrum (1D, 500 MHz, D₂O, predicted)	2021-09-24	Wishart Lab	View Spectrum
Predicted 1D NMR	¹³C NMR Spectrum (1D, 600 MHz, D₂O, predicted)	2021-09-24	Wishart Lab	View Spectrum
Predicted 1D NMR	¹H NMR Spectrum (1D, 600 MHz, D₂O, predicted)	2021-09-24	Wishart Lab	View Spectrum
Predicted 1D NMR	¹³C NMR Spectrum (1D, 700 MHz, D₂O, predicted)	2021-09-24	Wishart Lab	View Spectrum
Predicted 1D NMR	¹H NMR Spectrum (1D, 700 MHz, D₂O, predicted)	2021-09-24	Wishart Lab	View Spectrum
Predicted 1D NMR	¹³C NMR Spectrum (1D, 800 MHz, D₂O, predicted)	2021-09-24	Wishart Lab	View Spectrum
Predicted 1D NMR	¹H NMR Spectrum (1D, 800 MHz, D₂O, predicted)	2021-09-24	Wishart Lab	View Spectrum
Predicted 1D NMR	¹³C NMR Spectrum (1D, 900 MHz, D₂O, predicted)	2021-09-24	Wishart Lab	View Spectrum
Predicted 1D NMR	¹H NMR Spectrum (1D, 900 MHz, D₂O, predicted)	2021-09-24	Wishart Lab	View Spectrum

Biological Properties

Cellular Locations

Cytoplasm
Extracellular
Membrane

Biospecimen Locations

Not Available

Tissue Locations

Not Available

Pathways

Not Available

Name	SMPDB/PathBank	KEGG

Normal Concentrations

Not Available

Abnormal Concentrations

Not Available

Associated Disorders and Diseases

Disease References

None

Associated OMIM IDs

None

External Links

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FooDB ID

FDB020459

KNApSAcK ID

Not Available

Chemspider ID

113410

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

127871

PDB ID

Not Available

ChEBI ID

175569

Food Biomarker Ontology

Not Available

VMH ID

Not Available

MarkerDB ID

Not Available

Good Scents ID

rw1526321

References

Synthesis Reference

Not Available

Material Safety Data Sheet (MSDS)

Not Available

General References

Simons K, Toomre D: Lipid rafts and signal transduction. Nat Rev Mol Cell Biol. 2000 Oct;1(1):31-9. [PubMed:11413487 ]
Watson AD: Thematic review series: systems biology approaches to metabolic and cardiovascular disorders. Lipidomics: a global approach to lipid analysis in biological systems. J Lipid Res. 2006 Oct;47(10):2101-11. Epub 2006 Aug 10. [PubMed:16902246 ]
Sethi JK, Vidal-Puig AJ: Thematic review series: adipocyte biology. Adipose tissue function and plasticity orchestrate nutritional adaptation. J Lipid Res. 2007 Jun;48(6):1253-62. Epub 2007 Mar 20. [PubMed:17374880 ]
Lingwood D, Simons K: Lipid rafts as a membrane-organizing principle. Science. 2010 Jan 1;327(5961):46-50. doi: 10.1126/science.1174621. [PubMed:20044567 ]
(). Yannai, Shmuel. (2004) Dictionary of food compounds with CD-ROM: Additives, flavors, and ingredients. Boca Raton: Chapman & Hall/CRC.. .
Gunstone, Frank D., John L. Harwood, and Albert J. Dijkstra (2007). The lipid handbook with CD-ROM. CRC Press.

Showing metabocard for Veranisatin B (HMDB0040664)

MOL for HMDB0040664 (Veranisatin B)

3D MOL for HMDB0040664 (Veranisatin B)

3D SDF for HMDB0040664 (Veranisatin B)

3D-SDF for HMDB0040664 (Veranisatin B)

PDB for HMDB0040664 (Veranisatin B)

3D PDB for HMDB0040664 (Veranisatin B)

SMILES for HMDB0040664 (Veranisatin B)

INCHI for HMDB0040664 (Veranisatin B)

Structure for HMDB0040664 (Veranisatin B)

3D Structure for HMDB0040664 (Veranisatin B)

Predicted Collision Cross Sections

Predicted Kovats Retention Indices

Underivatized

Derivatized

GC-MS Spectra

MS/MS Spectra

NMR Spectra