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Record Information
Version5.0
StatusExpected but not Quantified
Creation Date2012-09-12 02:23:03 UTC
Update Date2022-03-07 02:56:44 UTC
HMDB IDHMDB0040799
Secondary Accession Numbers
  • HMDB40799
Metabolite Identification
Common Name11-Hydroxytubotaiwine
Description11-Hydroxytubotaiwine belongs to the class of organic compounds known as strychnos alkaloids. These are alkaloids having a core structure based on the strychnan, stemmadenine (seco-curan), or the akuammicine (curan) skeleton. 11-Hydroxytubotaiwine is a very strong basic compound (based on its pKa). 11-Hydroxytubotaiwine is an alkaloid from cultured cells of Aspidosperma quebracho-blanco (quebracho).
Structure
Data?1563863589
Synonyms
ValueSource
Methyl 18-ethyl-5-hydroxy-8,14-diazapentacyclo[9.5.2.0¹,⁹.0²,⁷.0¹⁴,¹⁷]octadeca-2(7),3,5,9-tetraene-10-carboxylic acidGenerator
Chemical FormulaC20H24N2O3
Average Molecular Weight340.4162
Monoisotopic Molecular Weight340.178692644
IUPAC Namemethyl 18-ethyl-5-hydroxy-8,14-diazapentacyclo[9.5.2.0¹,⁹.0²,⁷.0¹⁴,¹⁷]octadeca-2(7),3,5,9-tetraene-10-carboxylate
Traditional Namemethyl 18-ethyl-5-hydroxy-8,14-diazapentacyclo[9.5.2.0¹,⁹.0²,⁷.0¹⁴,¹⁷]octadeca-2(7),3,5,9-tetraene-10-carboxylate
CAS Registry NumberNot Available
SMILES
CCC1C2N3CCC22C(NC4=C2C=CC(O)=C4)=C(C1CC3)C(=O)OC
InChI Identifier
InChI=1S/C20H24N2O3/c1-3-12-13-6-8-22-9-7-20(18(12)22)14-5-4-11(23)10-15(14)21-17(20)16(13)19(24)25-2/h4-5,10,12-13,18,21,23H,3,6-9H2,1-2H3
InChI KeyILEBWSZOKJHVSX-UHFFFAOYSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as strychnos alkaloids. These are alkaloids having a core structure based on the strychnan, stemmadenine (seco-curan), or the akuammicine (curan) skeleton.
KingdomOrganic compounds
Super ClassAlkaloids and derivatives
ClassStrychnos alkaloids
Sub ClassNot Available
Direct ParentStrychnos alkaloids
Alternative ParentsNot Available
SubstituentsNot Available
Molecular FrameworkAromatic heteropolycyclic compounds
External DescriptorsNot Available
Ontology
Physiological effectNot Available
Disposition
ProcessNot Available
Role
Physical Properties
StateNot Available
Experimental Molecular Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
Water Solubility0.51 g/LALOGPS
logP2.85ALOGPS
logP0.52ChemAxon
logS-2.8ALOGPS
pKa (Strongest Acidic)7.16ChemAxon
pKa (Strongest Basic)12.63ChemAxon
Physiological Charge1ChemAxon
Hydrogen Acceptor Count4ChemAxon
Hydrogen Donor Count2ChemAxon
Polar Surface Area61.8 ŲChemAxon
Rotatable Bond Count3ChemAxon
Refractivity97.82 m³·mol⁻¹ChemAxon
Polarizability37.4 ųChemAxon
Number of Rings5ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterYesChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DarkChem[M+H]+180.69631661259
DarkChem[M-H]-177.831661259
DeepCCS[M-2H]-217.00730932474
DeepCCS[M+Na]+192.29730932474
AllCCS[M+H]+181.332859911
AllCCS[M+H-H2O]+178.332859911
AllCCS[M+NH4]+184.132859911
AllCCS[M+Na]+184.932859911
AllCCS[M-H]-188.632859911
AllCCS[M+Na-2H]-188.432859911
AllCCS[M+HCOO]-188.332859911

Predicted Kovats Retention Indices

Underivatized

MetaboliteSMILESKovats RI ValueColumn TypeReference
11-HydroxytubotaiwineCCC1C2N3CCC22C(NC4=C2C=CC(O)=C4)=C(C1CC3)C(=O)OC4265.4Standard polar33892256
11-HydroxytubotaiwineCCC1C2N3CCC22C(NC4=C2C=CC(O)=C4)=C(C1CC3)C(=O)OC2897.6Standard non polar33892256
11-HydroxytubotaiwineCCC1C2N3CCC22C(NC4=C2C=CC(O)=C4)=C(C1CC3)C(=O)OC3062.1Semi standard non polar33892256

Derivatized

Derivative Name / StructureSMILESKovats RI ValueColumn TypeReference
11-Hydroxytubotaiwine,1TMS,isomer #1CCC1C2CCN3CCC4(C(=C2C(=O)OC)NC2=CC(O[Si](C)(C)C)=CC=C24)C132926.7Semi standard non polar33892256
11-Hydroxytubotaiwine,1TMS,isomer #2CCC1C2CCN3CCC4(C(=C2C(=O)OC)N([Si](C)(C)C)C2=CC(O)=CC=C24)C132819.8Semi standard non polar33892256
11-Hydroxytubotaiwine,2TMS,isomer #1CCC1C2CCN3CCC4(C(=C2C(=O)OC)N([Si](C)(C)C)C2=CC(O[Si](C)(C)C)=CC=C24)C132865.4Semi standard non polar33892256
11-Hydroxytubotaiwine,2TMS,isomer #1CCC1C2CCN3CCC4(C(=C2C(=O)OC)N([Si](C)(C)C)C2=CC(O[Si](C)(C)C)=CC=C24)C132882.0Standard non polar33892256
11-Hydroxytubotaiwine,1TBDMS,isomer #1CCC1C2CCN3CCC4(C(=C2C(=O)OC)NC2=CC(O[Si](C)(C)C(C)(C)C)=CC=C24)C133126.9Semi standard non polar33892256
11-Hydroxytubotaiwine,1TBDMS,isomer #2CCC1C2CCN3CCC4(C(=C2C(=O)OC)N([Si](C)(C)C(C)(C)C)C2=CC(O)=CC=C24)C133017.7Semi standard non polar33892256
11-Hydroxytubotaiwine,2TBDMS,isomer #1CCC1C2CCN3CCC4(C(=C2C(=O)OC)N([Si](C)(C)C(C)(C)C)C2=CC(O[Si](C)(C)C(C)(C)C)=CC=C24)C133253.5Semi standard non polar33892256
11-Hydroxytubotaiwine,2TBDMS,isomer #1CCC1C2CCN3CCC4(C(=C2C(=O)OC)N([Si](C)(C)C(C)(C)C)C2=CC(O[Si](C)(C)C(C)(C)C)=CC=C24)C133372.3Standard non polar33892256
Spectra

GC-MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted GC-MSPredicted GC-MS Spectrum - 11-Hydroxytubotaiwine GC-MS (Non-derivatized) - 70eV, Positivesplash10-0400-2169000000-426dc92a36a4349a04422017-09-01Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - 11-Hydroxytubotaiwine GC-MS (1 TMS) - 70eV, Positivesplash10-001j-1019000000-a0cb0c0ddbd64676da932017-10-06Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - 11-Hydroxytubotaiwine GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 11-Hydroxytubotaiwine 10V, Positive-QTOFsplash10-0006-0009000000-6b10e1a580d1efdba6d22017-09-01Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 11-Hydroxytubotaiwine 20V, Positive-QTOFsplash10-0536-0039000000-ad8097ec6e6d6226d0762017-09-01Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 11-Hydroxytubotaiwine 40V, Positive-QTOFsplash10-0gir-0290000000-4da506b083a0d61741492017-09-01Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 11-Hydroxytubotaiwine 10V, Negative-QTOFsplash10-000i-0019000000-c20cbe31aa7e393ce65d2017-09-01Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 11-Hydroxytubotaiwine 20V, Negative-QTOFsplash10-0019-0059000000-791c85e68729835da8be2017-09-01Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 11-Hydroxytubotaiwine 40V, Negative-QTOFsplash10-0ue9-0090000000-5b140cf38f837962a67b2017-09-01Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 11-Hydroxytubotaiwine 10V, Negative-QTOFsplash10-052r-0009000000-437d0197c047eb2cc7202021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 11-Hydroxytubotaiwine 20V, Negative-QTOFsplash10-000i-0009000000-035d42d01b5221877b992021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 11-Hydroxytubotaiwine 40V, Negative-QTOFsplash10-000i-0059000000-72216c1022f0fe4e98a02021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 11-Hydroxytubotaiwine 10V, Positive-QTOFsplash10-0006-0009000000-3b43e0643b1819424eeb2021-09-23Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 11-Hydroxytubotaiwine 20V, Positive-QTOFsplash10-0006-0019000000-2ba77f2622a02ac512a62021-09-23Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 11-Hydroxytubotaiwine 40V, Positive-QTOFsplash10-00m0-0095000000-01a6f2f8eecca4c6877a2021-09-23Wishart LabView Spectrum
Biological Properties
Cellular Locations
  • Membrane
Biospecimen LocationsNot Available
Tissue LocationsNot Available
Pathways
Normal Concentrations
Not Available
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDFDB020615
KNApSAcK IDNot Available
Chemspider IDNot Available
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound131752942
PDB IDNot Available
ChEBI IDNot Available
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDNot Available
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General References
  1. (). Yannai, Shmuel. (2004) Dictionary of food compounds with CD-ROM: Additives, flavors, and ingredients. Boca Raton: Chapman & Hall/CRC.. .