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Record Information

Version

5.0

Status

Expected but not Quantified

Creation Date

2012-09-12 03:16:27 UTC

Update Date

2022-03-07 02:57:05 UTC

HMDB ID

HMDB0041581

Secondary Accession Numbers

HMDB41581

Metabolite Identification

Common Name

Cucurbitachrome 1

Description

Cucurbitachrome 1 belongs to the class of organic compounds known as xanthophylls. These are carotenoids containing an oxygenated carotene backbone. Carotenes are characterized by the presence of two end-groups (mostly cyclohexene rings, but also cyclopentene rings or acyclic groups) linked by a long branched alkyl chain. Carotenes belonging form a subgroup of the carotenoids family. Xanthophylls arise by oxygenation of the carotene backbone. Based on a literature review a significant number of articles have been published on Cucurbitachrome 1.

Structure

MOL 3D MOL SDF 3D SDF PDB 3D PDB SMILES InChI


  Mrv0541 02241209502D          

 44 47  0  0  0  0            999 V2000
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M  END

HMDB0041581
     RDKit          3D
Cucurbitachrome 1
100103  0  0  0  0  0  0  0  0999 V2000
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M  END


  Mrv0541 02241209502D          

 44 47  0  0  0  0            999 V2000
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M  END
> <DATABASE_ID>
HMDB0041581

> <DATABASE_NAME>
hmdb

> <SMILES>
C\C(\C=C\C=C(/C)\C=C\C12OC(CC1(C)C)CC2(C)O)=C/C=C/C=C(\C)/C=C/C=C(\C)C1OC2(C)CC(O)CC(C)(C)C2=C1

> <INCHI_IDENTIFIER>
InChI=1S/C40H56O4/c1-28(17-13-18-30(3)21-22-40-37(7,8)26-33(43-40)27-39(40,10)42)15-11-12-16-29(2)19-14-20-31(4)34-23-35-36(5,6)24-32(41)25-38(35,9)44-34/h11-23,32-34,41-42H,24-27H2,1-10H3/b12-11+,17-13+,19-14+,22-21+,28-15+,29-16+,30-18+,31-20+

> <INCHI_KEY>
YMNKXGQZDVGTFM-OMSIYMKDSA-N

> <FORMULA>
C40H56O4

> <MOLECULAR_WEIGHT>
600.8702

> <EXACT_MASS>
600.41786028

> <JCHEM_ACCEPTOR_COUNT>
4

> <JCHEM_AVERAGE_POLARIZABILITY>
73.854816915595

> <JCHEM_BIOAVAILABILITY>
0

> <JCHEM_DONOR_COUNT>
2

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
0

> <JCHEM_IUPAC>
2-[(2E,4E,6E,8E,10E,12E,14E,16E)-17-{2-hydroxy-2,6,6-trimethyl-7-oxabicyclo[2.2.1]heptan-1-yl}-6,11,15-trimethylheptadeca-2,4,6,8,10,12,14,16-octaen-2-yl]-4,4,7a-trimethyl-2,4,5,6,7,7a-hexahydro-1-benzofuran-6-ol

> <ALOGPS_LOGP>
8.15

> <JCHEM_LOGP>
6.986384524

> <ALOGPS_LOGS>
-6.05

> <JCHEM_MDDR_LIKE_RULE>
1

> <JCHEM_NUMBER_OF_RINGS>
4

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA>
15.145138452398253

> <JCHEM_PKA_STRONGEST_ACIDIC>
13.69207575130897

> <JCHEM_PKA_STRONGEST_BASIC>
-2.7423933654223616

> <JCHEM_POLAR_SURFACE_AREA>
58.92

> <JCHEM_REFRACTIVITY>
192.20180000000008

> <JCHEM_ROTATABLE_BOND_COUNT>
9

> <JCHEM_RULE_OF_FIVE>
0

> <ALOGPS_SOLUBILITY>
5.38e-04 g/l

> <JCHEM_TRADITIONAL_IUPAC>
2-[(2E,4E,6E,8E,10E,12E,14E,16E)-17-{2-hydroxy-2,6,6-trimethyl-7-oxabicyclo[2.2.1]heptan-1-yl}-6,11,15-trimethylheptadeca-2,4,6,8,10,12,14,16-octaen-2-yl]-4,4,7a-trimethyl-2,5,6,7-tetrahydro-1-benzofuran-6-ol

> <JCHEM_VEBER_RULE>
0

$$$$

HMDB0041581
     RDKit          3D
Cucurbitachrome 1
100103  0  0  0  0  0  0  0  0999 V2000
    0.3290   -3.6821   -1.2534 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4374   -2.9049   -1.5268 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.5961   -2.1375   -1.8211 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.6879   -2.8172   -2.3599 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.9267   -2.0713   -2.6457 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.9207   -2.8413   -3.2077 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.7470   -4.2338   -3.5231 C   0  0  0  0  0  0  0  0  0  0  0  0
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    9.7219   -2.5035   -3.6557 C   0  0  0  0  0  0  0  0  0  0  0  0
   10.2312   -3.1561   -2.4237 O   0  0  0  0  0  0  0  0  0  0  0  0
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   -7.1380    2.9590    4.9025 O   0  0  0  0  0  0  0  0  0  0  0  0
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  3  4  2  0
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  9 10  1  0
 10 11  1  0
 11 12  1  0
 12 13  1  0
 13 14  1  0
 14 15  1  0
 14 16  1  0
 12 17  1  0
 17 18  1  0
 18 19  1  0
 18 20  1  0
  2 21  2  0
 21 22  1  0
 22 23  2  0
 23 24  1  0
 24 25  2  0
 25 26  1  0
 25 27  1  0
 27 28  2  0
 28 29  1  0
 29 30  2  0
 30 31  1  0
 30 32  1  0
 32 33  1  0
 33 34  2  0
 34 35  1  0
 35 36  1  0
 35 37  1  0
 35 38  1  0
 38 39  1  0
 39 40  1  0
 39 41  1  0
 41 42  1  0
 42 43  1  0
 42 44  1  0
 14 10  1  0
 44 32  1  0
 18 10  1  0
 42 34  1  0
  1 45  1  0
  1 46  1  0
  1 47  1  0
  3 48  1  0
  4 49  1  0
  5 50  1  0
  7 51  1  0
  7 52  1  0
  7 53  1  0
  8 54  1  0
  9 55  1  0
 12 56  1  0
 13 57  1  0
 13 58  1  0
 15 59  1  0
 15 60  1  0
 15 61  1  0
 16 62  1  0
 16 63  1  0
 16 64  1  0
 17 65  1  0
 17 66  1  0
 19 67  1  0
 19 68  1  0
 19 69  1  0
 20 70  1  0
 21 71  1  0
 22 72  1  0
 23 73  1  0
 24 74  1  0
 26 75  1  0
 26 76  1  0
 26 77  1  0
 27 78  1  0
 28 79  1  0
 29 80  1  0
 31 81  1  0
 31 82  1  0
 31 83  1  0
 32 84  1  0
 33 85  1  0
 36 86  1  0
 36 87  1  0
 36 88  1  0
 37 89  1  0
 37 90  1  0
 37 91  1  0
 38 92  1  0
 38 93  1  0
 39 94  1  0
 40 95  1  0
 41 96  1  0
 41 97  1  0
 43 98  1  0
 43 99  1  0
 43100  1  0
M  END

HEADER    PROTEIN                                 24-FEB-12   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   24-FEB-12         0                                  
HETATM    1  C   UNK     0     -15.196  -1.193   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0     -15.196  -2.734   0.000  0.00  0.00           C+0
HETATM    3  C   UNK     0     -13.864  -3.505   0.000  0.00  0.00           C+0
HETATM    4  C   UNK     0     -12.532  -2.734   0.000  0.00  0.00           C+0
HETATM    5  C   UNK     0     -12.532  -1.193   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0     -13.864  -0.425   0.000  0.00  0.00           C+0
HETATM    7  C   UNK     0     -11.201  -0.425   0.000  0.00  0.00           C+0
HETATM    8  C   UNK     0      -9.866  -1.193   0.000  0.00  0.00           C+0
HETATM    9  C   UNK     0      -8.534  -0.425   0.000  0.00  0.00           C+0
HETATM   10  C   UNK     0      -7.199  -1.193   0.000  0.00  0.00           C+0
HETATM   11  C   UNK     0      -5.867  -0.425   0.000  0.00  0.00           C+0
HETATM   12  C   UNK     0      -4.532  -1.193   0.000  0.00  0.00           C+0
HETATM   13  C   UNK     0      -3.200  -0.425   0.000  0.00  0.00           C+0
HETATM   14  C   UNK     0      -1.865  -1.193   0.000  0.00  0.00           C+0
HETATM   15  C   UNK     0      -0.533  -0.425   0.000  0.00  0.00           C+0
HETATM   16  C   UNK     0       0.801  -1.193   0.000  0.00  0.00           C+0
HETATM   17  C   UNK     0       2.133  -0.425   0.000  0.00  0.00           C+0
HETATM   18  C   UNK     0       3.468  -1.193   0.000  0.00  0.00           C+0
HETATM   19  C   UNK     0       4.800  -0.425   0.000  0.00  0.00           C+0
HETATM   20  C   UNK     0       6.135  -1.193   0.000  0.00  0.00           C+0
HETATM   21  C   UNK     0       7.467  -0.425   0.000  0.00  0.00           C+0
HETATM   22  C   UNK     0       8.802  -1.193   0.000  0.00  0.00           C+0
HETATM   23  C   UNK     0      -8.534   1.116   0.000  0.00  0.00           C+0
HETATM   24  C   UNK     0      -3.200   1.116   0.000  0.00  0.00           C+0
HETATM   25  C   UNK     0       3.468  -2.734   0.000  0.00  0.00           C+0
HETATM   26  C   UNK     0       8.802  -2.734   0.000  0.00  0.00           C+0
HETATM   27  C   UNK     0     -10.991  -2.734   0.000  0.00  0.00           C+0
HETATM   28  O   UNK     0     -12.135  -4.227   0.000  0.00  0.00           O+0
HETATM   29  C   UNK     0     -14.262   1.064   0.000  0.00  0.00           C+0
HETATM   30  C   UNK     0     -13.094   0.910   0.000  0.00  0.00           C+0
HETATM   31  O   UNK     0     -14.425  -1.400   0.000  0.00  0.00           O+0
HETATM   32  C   UNK     0      10.137  -0.422   0.000  0.00  0.00           C+0
HETATM   33  C   UNK     0      11.536  -1.060   0.000  0.00  0.00           C+0
HETATM   34  C   UNK     0      12.572   0.074   0.000  0.00  0.00           C+0
HETATM   35  C   UNK     0      11.811   1.409   0.000  0.00  0.00           C+0
HETATM   36  O   UNK     0      10.303   1.097   0.000  0.00  0.00           O+0
HETATM   37  C   UNK     0      14.105   0.074   0.000  0.00  0.00           C+0
HETATM   38  C   UNK     0      14.876   1.409   0.000  0.00  0.00           C+0
HETATM   39  C   UNK     0      14.105   2.738   0.000  0.00  0.00           C+0
HETATM   40  C   UNK     0      12.572   2.738   0.000  0.00  0.00           C+0
HETATM   41  C   UNK     0      11.040   2.744   0.000  0.00  0.00           C+0
HETATM   42  O   UNK     0      14.503   4.227   0.000  0.00  0.00           O+0
HETATM   43  C   UNK     0      14.105  -1.467   0.000  0.00  0.00           C+0
HETATM   44  C   UNK     0      15.196  -1.017   0.000  0.00  0.00           C+0
CONECT    1    2    6                                                       
CONECT    2    1    3   31                                                  
CONECT    3    2    4                                                       
CONECT    4    3    5   27   28                                             
CONECT    5    4    6    7   31                                             
CONECT    6    1    5   29   30                                             
CONECT    7    5    8                                                       
CONECT    8    7    9                                                       
CONECT    9    8   10   23                                                  
CONECT   10    9   11                                                       
CONECT   11   10   12                                                       
CONECT   12   11   13                                                       
CONECT   13   12   14   24                                                  
CONECT   14   13   15                                                       
CONECT   15   14   16                                                       
CONECT   16   15   17                                                       
CONECT   17   16   18                                                       
CONECT   18   17   19   25                                                  
CONECT   19   18   20                                                       
CONECT   20   19   21                                                       
CONECT   21   20   22                                                       
CONECT   22   21   26   32                                                  
CONECT   23    9                                                            
CONECT   24   13                                                            
CONECT   25   18                                                            
CONECT   26   22                                                            
CONECT   27    4                                                            
CONECT   28    4                                                            
CONECT   29    6                                                            
CONECT   30    6                                                            
CONECT   31    2    5                                                       
CONECT   32   22   33   36                                                  
CONECT   33   32   34                                                       
CONECT   34   33   35   37                                                  
CONECT   35   34   36   40   41                                             
CONECT   36   32   35                                                       
CONECT   37   34   38   43   44                                             
CONECT   38   37   39                                                       
CONECT   39   38   40   42                                                  
CONECT   40   35   39                                                       
CONECT   41   35                                                            
CONECT   42   39                                                            
CONECT   43   37                                                            
CONECT   44   37                                                            
MASTER        0    0    0    0    0    0    0    0   44    0   94    0
END

COMPND    HMDB0041581
HETATM    1  C1  UNL     1       0.329  -3.682  -1.253  1.00  0.00           C  
HETATM    2  C2  UNL     1       1.437  -2.905  -1.527  1.00  0.00           C  
HETATM    3  C3  UNL     1       2.596  -2.138  -1.821  1.00  0.00           C  
HETATM    4  C4  UNL     1       3.688  -2.817  -2.360  1.00  0.00           C  
HETATM    5  C5  UNL     1       4.927  -2.071  -2.646  1.00  0.00           C  
HETATM    6  C6  UNL     1       5.921  -2.841  -3.208  1.00  0.00           C  
HETATM    7  C7  UNL     1       5.747  -4.234  -3.523  1.00  0.00           C  
HETATM    8  C8  UNL     1       7.273  -2.231  -3.123  1.00  0.00           C  
HETATM    9  C9  UNL     1       8.298  -2.860  -3.624  1.00  0.00           C  
HETATM   10  C10 UNL     1       9.722  -2.504  -3.656  1.00  0.00           C  
HETATM   11  O1  UNL     1      10.231  -3.156  -2.424  1.00  0.00           O  
HETATM   12  C11 UNL     1      11.589  -2.984  -2.698  1.00  0.00           C  
HETATM   13  C12 UNL     1      11.752  -1.558  -3.129  1.00  0.00           C  
HETATM   14  C13 UNL     1      10.240  -1.205  -3.361  1.00  0.00           C  
HETATM   15  C14 UNL     1       9.842  -0.682  -2.000  1.00  0.00           C  
HETATM   16  C15 UNL     1      10.104  -0.069  -4.324  1.00  0.00           C  
HETATM   17  C16 UNL     1      11.667  -3.877  -3.927  1.00  0.00           C  
HETATM   18  C17 UNL     1      10.473  -3.353  -4.656  1.00  0.00           C  
HETATM   19  C18 UNL     1      10.690  -2.784  -5.998  1.00  0.00           C  
HETATM   20  O2  UNL     1       9.621  -4.486  -4.836  1.00  0.00           O  
HETATM   21  C19 UNL     1       0.695  -1.604  -1.036  1.00  0.00           C  
HETATM   22  C20 UNL     1      -0.606  -1.563  -0.511  1.00  0.00           C  
HETATM   23  C21 UNL     1      -1.079  -0.303  -0.198  1.00  0.00           C  
HETATM   24  C22 UNL     1      -2.376  -0.196   0.385  1.00  0.00           C  
HETATM   25  C23 UNL     1      -2.795   1.069   0.590  1.00  0.00           C  
HETATM   26  C24 UNL     1      -2.042   2.237   0.226  1.00  0.00           C  
HETATM   27  C25 UNL     1      -3.902   1.187   1.601  1.00  0.00           C  
HETATM   28  C26 UNL     1      -4.403   2.327   1.910  1.00  0.00           C  
HETATM   29  C27 UNL     1      -5.438   2.645   2.864  1.00  0.00           C  
HETATM   30  C28 UNL     1      -5.882   3.859   3.065  1.00  0.00           C  
HETATM   31  C29 UNL     1      -5.411   5.036   2.361  1.00  0.00           C  
HETATM   32  C30 UNL     1      -7.043   4.021   4.056  1.00  0.00           C  
HETATM   33  C31 UNL     1      -8.277   4.011   3.192  1.00  0.00           C  
HETATM   34  C32 UNL     1      -8.997   2.969   3.562  1.00  0.00           C  
HETATM   35  C33 UNL     1     -10.327   2.385   3.087  1.00  0.00           C  
HETATM   36  C34 UNL     1     -10.937   3.463   2.163  1.00  0.00           C  
HETATM   37  C35 UNL     1     -10.016   1.250   2.167  1.00  0.00           C  
HETATM   38  C36 UNL     1     -11.158   2.081   4.265  1.00  0.00           C  
HETATM   39  C37 UNL     1     -10.764   2.869   5.504  1.00  0.00           C  
HETATM   40  O3  UNL     1     -11.110   4.191   5.406  1.00  0.00           O  
HETATM   41  C38 UNL     1      -9.341   2.753   5.916  1.00  0.00           C  
HETATM   42  C39 UNL     1      -8.375   2.388   4.765  1.00  0.00           C  
HETATM   43  C40 UNL     1      -8.222   0.903   4.818  1.00  0.00           C  
HETATM   44  O4  UNL     1      -7.138   2.959   4.902  1.00  0.00           O  
HETATM   45  H1  UNL     1       0.526  -4.825  -1.421  1.00  0.00           H  
HETATM   46  H2  UNL     1      -0.555  -3.517  -1.883  1.00  0.00           H  
HETATM   47  H3  UNL     1      -0.031  -3.730  -0.181  1.00  0.00           H  
HETATM   48  H4  UNL     1       2.879  -1.122  -1.748  1.00  0.00           H  
HETATM   49  H5  UNL     1       3.533  -3.846  -2.510  1.00  0.00           H  
HETATM   50  H6  UNL     1       5.097  -1.062  -2.457  1.00  0.00           H  
HETATM   51  H7  UNL     1       6.570  -4.872  -3.056  1.00  0.00           H  
HETATM   52  H8  UNL     1       4.789  -4.712  -3.388  1.00  0.00           H  
HETATM   53  H9  UNL     1       5.940  -4.369  -4.660  1.00  0.00           H  
HETATM   54  H10 UNL     1       7.398  -1.309  -2.628  1.00  0.00           H  
HETATM   55  H11 UNL     1       8.044  -3.806  -4.138  1.00  0.00           H  
HETATM   56  H12 UNL     1      12.218  -3.314  -1.845  1.00  0.00           H  
HETATM   57  H13 UNL     1      12.264  -1.366  -4.039  1.00  0.00           H  
HETATM   58  H14 UNL     1      12.126  -0.930  -2.282  1.00  0.00           H  
HETATM   59  H15 UNL     1      10.713  -0.092  -1.562  1.00  0.00           H  
HETATM   60  H16 UNL     1       9.472  -1.438  -1.311  1.00  0.00           H  
HETATM   61  H17 UNL     1       9.045   0.101  -2.160  1.00  0.00           H  
HETATM   62  H18 UNL     1      10.169   0.933  -3.830  1.00  0.00           H  
HETATM   63  H19 UNL     1       9.032  -0.082  -4.706  1.00  0.00           H  
HETATM   64  H20 UNL     1      10.740  -0.216  -5.186  1.00  0.00           H  
HETATM   65  H21 UNL     1      12.617  -3.763  -4.434  1.00  0.00           H  
HETATM   66  H22 UNL     1      11.548  -4.945  -3.603  1.00  0.00           H  
HETATM   67  H23 UNL     1      10.874  -3.675  -6.693  1.00  0.00           H  
HETATM   68  H24 UNL     1       9.766  -2.323  -6.408  1.00  0.00           H  
HETATM   69  H25 UNL     1      11.600  -2.206  -6.095  1.00  0.00           H  
HETATM   70  H26 UNL     1       9.491  -4.672  -5.768  1.00  0.00           H  
HETATM   71  H27 UNL     1       1.272  -0.693  -1.173  1.00  0.00           H  
HETATM   72  H28 UNL     1      -1.286  -2.372  -0.347  1.00  0.00           H  
HETATM   73  H29 UNL     1      -0.433   0.517  -0.408  1.00  0.00           H  
HETATM   74  H30 UNL     1      -2.998  -1.003   0.655  1.00  0.00           H  
HETATM   75  H31 UNL     1      -2.698   3.124  -0.045  1.00  0.00           H  
HETATM   76  H32 UNL     1      -1.550   2.059  -0.789  1.00  0.00           H  
HETATM   77  H33 UNL     1      -1.330   2.607   0.952  1.00  0.00           H  
HETATM   78  H34 UNL     1      -4.301   0.315   2.072  1.00  0.00           H  
HETATM   79  H35 UNL     1      -3.974   3.179   1.339  1.00  0.00           H  
HETATM   80  H36 UNL     1      -5.904   1.863   3.474  1.00  0.00           H  
HETATM   81  H37 UNL     1      -6.218   5.677   1.909  1.00  0.00           H  
HETATM   82  H38 UNL     1      -4.925   5.739   3.112  1.00  0.00           H  
HETATM   83  H39 UNL     1      -4.716   4.818   1.550  1.00  0.00           H  
HETATM   84  H40 UNL     1      -6.935   4.951   4.562  1.00  0.00           H  
HETATM   85  H41 UNL     1      -8.479   4.719   2.448  1.00  0.00           H  
HETATM   86  H42 UNL     1     -11.863   3.074   1.661  1.00  0.00           H  
HETATM   87  H43 UNL     1     -11.046   4.431   2.631  1.00  0.00           H  
HETATM   88  H44 UNL     1     -10.151   3.541   1.352  1.00  0.00           H  
HETATM   89  H45 UNL     1     -10.279   1.550   1.081  1.00  0.00           H  
HETATM   90  H46 UNL     1      -8.910   1.087   2.063  1.00  0.00           H  
HETATM   91  H47 UNL     1     -10.610   0.358   2.338  1.00  0.00           H  
HETATM   92  H48 UNL     1     -11.235   0.991   4.509  1.00  0.00           H  
HETATM   93  H49 UNL     1     -12.229   2.399   4.044  1.00  0.00           H  
HETATM   94  H50 UNL     1     -11.383   2.446   6.334  1.00  0.00           H  
HETATM   95  H51 UNL     1     -12.086   4.259   5.275  1.00  0.00           H  
HETATM   96  H52 UNL     1      -9.019   3.664   6.436  1.00  0.00           H  
HETATM   97  H53 UNL     1      -9.242   1.910   6.650  1.00  0.00           H  
HETATM   98  H54 UNL     1      -7.151   0.576   4.779  1.00  0.00           H  
HETATM   99  H55 UNL     1      -8.916   0.283   4.252  1.00  0.00           H  
HETATM  100  H56 UNL     1      -8.477   0.594   5.914  1.00  0.00           H  
CONECT    1    2   45   46   47
CONECT    2    3   21   21
CONECT    3    4    4   48
CONECT    4    5   49
CONECT    5    6    6   50
CONECT    6    7    8
CONECT    7   51   52   53
CONECT    8    9    9   54
CONECT    9   10   55
CONECT   10   11   14   18
CONECT   11   12
CONECT   12   13   17   56
CONECT   13   14   57   58
CONECT   14   15   16
CONECT   15   59   60   61
CONECT   16   62   63   64
CONECT   17   18   65   66
CONECT   18   19   20
CONECT   19   67   68   69
CONECT   20   70
CONECT   21   22   71
CONECT   22   23   23   72
CONECT   23   24   73
CONECT   24   25   25   74
CONECT   25   26   27
CONECT   26   75   76   77
CONECT   27   28   28   78
CONECT   28   29   79
CONECT   29   30   30   80
CONECT   30   31   32
CONECT   31   81   82   83
CONECT   32   33   44   84
CONECT   33   34   34   85
CONECT   34   35   42
CONECT   35   36   37   38
CONECT   36   86   87   88
CONECT   37   89   90   91
CONECT   38   39   92   93
CONECT   39   40   41   94
CONECT   40   95
CONECT   41   42   96   97
CONECT   42   43   44
CONECT   43   98   99  100
END

HMDB0041581
     RDKit          3D
Cucurbitachrome 1
100103  0  0  0  0  0  0  0  0999 V2000
    0.3290   -3.6821   -1.2534 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4374   -2.9049   -1.5268 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.5961   -2.1375   -1.8211 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.6879   -2.8172   -2.3599 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.9267   -2.0713   -2.6457 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.9207   -2.8413   -3.2077 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.7470   -4.2338   -3.5231 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.2732   -2.2312   -3.1227 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.2984   -2.8597   -3.6237 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.7219   -2.5035   -3.6557 C   0  0  0  0  0  0  0  0  0  0  0  0
   10.2312   -3.1561   -2.4237 O   0  0  0  0  0  0  0  0  0  0  0  0
   11.5893   -2.9844   -2.6978 C   0  0  0  0  0  0  0  0  0  0  0  0
   11.7522   -1.5578   -3.1293 C   0  0  0  0  0  0  0  0  0  0  0  0
   10.2401   -1.2052   -3.3609 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.8421   -0.6824   -2.0003 C   0  0  0  0  0  0  0  0  0  0  0  0
   10.1041   -0.0690   -4.3239 C   0  0  0  0  0  0  0  0  0  0  0  0
   11.6672   -3.8769   -3.9268 C   0  0  0  0  0  0  0  0  0  0  0  0
   10.4732   -3.3531   -4.6563 C   0  0  0  0  0  0  0  0  0  0  0  0
   10.6899   -2.7842   -5.9981 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.6211   -4.4858   -4.8365 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.6949   -1.6039   -1.0358 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6060   -1.5628   -0.5105 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0790   -0.3030   -0.1979 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3765   -0.1962    0.3854 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7952    1.0691    0.5902 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0424    2.2373    0.2261 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.9021    1.1867    1.6015 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.4025    2.3266    1.9101 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.4385    2.6447    2.8644 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.8817    3.8592    3.0648 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.4111    5.0362    2.3609 C   0  0  0  0  0  0  0  0  0  0  0  0
   -7.0425    4.0207    4.0564 C   0  0  0  0  0  0  0  0  0  0  0  0
   -8.2769    4.0107    3.1925 C   0  0  0  0  0  0  0  0  0  0  0  0
   -8.9967    2.9694    3.5615 C   0  0  0  0  0  0  0  0  0  0  0  0
  -10.3267    2.3851    3.0866 C   0  0  0  0  0  0  0  0  0  0  0  0
  -10.9369    3.4625    2.1629 C   0  0  0  0  0  0  0  0  0  0  0  0
  -10.0158    1.2503    2.1669 C   0  0  0  0  0  0  0  0  0  0  0  0
  -11.1580    2.0809    4.2647 C   0  0  0  0  0  0  0  0  0  0  0  0
  -10.7643    2.8690    5.5037 C   0  0  0  0  0  0  0  0  0  0  0  0
  -11.1096    4.1909    5.4063 O   0  0  0  0  0  0  0  0  0  0  0  0
   -9.3412    2.7531    5.9157 C   0  0  0  0  0  0  0  0  0  0  0  0
   -8.3753    2.3881    4.7649 C   0  0  0  0  0  0  0  0  0  0  0  0
   -8.2224    0.9030    4.8180 C   0  0  0  0  0  0  0  0  0  0  0  0
   -7.1380    2.9590    4.9025 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.5262   -4.8254   -1.4208 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5552   -3.5169   -1.8833 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0306   -3.7299   -0.1810 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.8793   -1.1217   -1.7482 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.5328   -3.8464   -2.5097 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.0967   -1.0625   -2.4570 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.5701   -4.8715   -3.0555 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.7888   -4.7124   -3.3881 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.9398   -4.3690   -4.6597 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.3981   -1.3094   -2.6281 H   0  0  0  0  0  0  0  0  0  0  0  0
    8.0441   -3.8065   -4.1377 H   0  0  0  0  0  0  0  0  0  0  0  0
   12.2180   -3.3138   -1.8446 H   0  0  0  0  0  0  0  0  0  0  0  0
   12.2642   -1.3663   -4.0388 H   0  0  0  0  0  0  0  0  0  0  0  0
   12.1258   -0.9298   -2.2816 H   0  0  0  0  0  0  0  0  0  0  0  0
   10.7130   -0.0925   -1.5616 H   0  0  0  0  0  0  0  0  0  0  0  0
    9.4721   -1.4378   -1.3112 H   0  0  0  0  0  0  0  0  0  0  0  0
    9.0451    0.1007   -2.1601 H   0  0  0  0  0  0  0  0  0  0  0  0
   10.1695    0.9326   -3.8299 H   0  0  0  0  0  0  0  0  0  0  0  0
    9.0323   -0.0823   -4.7062 H   0  0  0  0  0  0  0  0  0  0  0  0
   10.7401   -0.2164   -5.1855 H   0  0  0  0  0  0  0  0  0  0  0  0
   12.6173   -3.7632   -4.4341 H   0  0  0  0  0  0  0  0  0  0  0  0
   11.5484   -4.9452   -3.6027 H   0  0  0  0  0  0  0  0  0  0  0  0
   10.8735   -3.6747   -6.6934 H   0  0  0  0  0  0  0  0  0  0  0  0
    9.7665   -2.3225   -6.4079 H   0  0  0  0  0  0  0  0  0  0  0  0
   11.6003   -2.2064   -6.0954 H   0  0  0  0  0  0  0  0  0  0  0  0
    9.4912   -4.6716   -5.7684 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.2721   -0.6928   -1.1734 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2859   -2.3716   -0.3466 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4328    0.5169   -0.4076 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.9977   -1.0033    0.6552 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.6975    3.1244   -0.0453 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5496    2.0588   -0.7893 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3300    2.6075    0.9517 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.3014    0.3148    2.0721 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.9737    3.1786    1.3395 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.9040    1.8630    3.4737 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.2182    5.6769    1.9085 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.9251    5.7394    3.1120 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.7163    4.8178    1.5499 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.9355    4.9515    4.5622 H   0  0  0  0  0  0  0  0  0  0  0  0
   -8.4785    4.7187    2.4477 H   0  0  0  0  0  0  0  0  0  0  0  0
  -11.8628    3.0736    1.6614 H   0  0  0  0  0  0  0  0  0  0  0  0
  -11.0457    4.4306    2.6310 H   0  0  0  0  0  0  0  0  0  0  0  0
  -10.1513    3.5406    1.3516 H   0  0  0  0  0  0  0  0  0  0  0  0
  -10.2787    1.5503    1.0806 H   0  0  0  0  0  0  0  0  0  0  0  0
   -8.9101    1.0866    2.0635 H   0  0  0  0  0  0  0  0  0  0  0  0
  -10.6101    0.3575    2.3376 H   0  0  0  0  0  0  0  0  0  0  0  0
  -11.2349    0.9906    4.5093 H   0  0  0  0  0  0  0  0  0  0  0  0
  -12.2293    2.3987    4.0442 H   0  0  0  0  0  0  0  0  0  0  0  0
  -11.3833    2.4460    6.3336 H   0  0  0  0  0  0  0  0  0  0  0  0
  -12.0865    4.2589    5.2753 H   0  0  0  0  0  0  0  0  0  0  0  0
   -9.0192    3.6642    6.4365 H   0  0  0  0  0  0  0  0  0  0  0  0
   -9.2417    1.9104    6.6499 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.1514    0.5761    4.7787 H   0  0  0  0  0  0  0  0  0  0  0  0
   -8.9161    0.2825    4.2516 H   0  0  0  0  0  0  0  0  0  0  0  0
   -8.4768    0.5941    5.9136 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  1  0
  3  4  2  0
  4  5  1  0
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  6  7  1  0
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  9 10  1  0
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 43100  1  0
M  END

View in JSmol View Stereo Labels

Synonyms

Value	Source
(3S,3's,5R,5'r,6R,8'r)-3,6:5',8'-Diepoxy-5,5',6,8'-tetrahydro-3',5-dihydroxy-beta,beta-carotene	HMDB
Curcurbitachrome 1	HMDB

Chemical Formula

C₄₀H₅₆O₄

Average Molecular Weight

600.8702

Monoisotopic Molecular Weight

600.41786028

IUPAC Name

2-[(2E,4E,6E,8E,10E,12E,14E,16E)-17-{2-hydroxy-2,6,6-trimethyl-7-oxabicyclo[2.2.1]heptan-1-yl}-6,11,15-trimethylheptadeca-2,4,6,8,10,12,14,16-octaen-2-yl]-4,4,7a-trimethyl-2,4,5,6,7,7a-hexahydro-1-benzofuran-6-ol

Traditional Name

CAS Registry Number

181229-73-2

SMILES

C\C(\C=C\C=C(/C)\C=C\C12OC(CC1(C)C)CC2(C)O)=C/C=C/C=C(\C)/C=C/C=C(\C)C1OC2(C)CC(O)CC(C)(C)C2=C1

InChI Identifier

InChI=1S/C40H56O4/c1-28(17-13-18-30(3)21-22-40-37(7,8)26-33(43-40)27-39(40,10)42)15-11-12-16-29(2)19-14-20-31(4)34-23-35-36(5,6)24-32(41)25-38(35,9)44-34/h11-23,32-34,41-42H,24-27H2,1-10H3/b12-11+,17-13+,19-14+,22-21+,28-15+,29-16+,30-18+,31-20+

InChI Key

YMNKXGQZDVGTFM-OMSIYMKDSA-N

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as xanthophylls. These are carotenoids containing an oxygenated carotene backbone. Carotenes are characterized by the presence of two end-groups (mostly cyclohexene rings, but also cyclopentene rings or acyclic groups) linked by a long branched alkyl chain. Carotenes belonging form a subgroup of the carotenoids family. Xanthophylls arise by oxygenation of the carotene backbone.

Kingdom

Organic compounds

Super Class

Lipids and lipid-like molecules

Class

Prenol lipids

Sub Class

Tetraterpenoids

Direct Parent

Xanthophylls

Alternative Parents

Substituents

Xanthophyll
Benzofuran
Monosaccharide
Cyclic alcohol
Dihydrofuran
Tetrahydrofuran
Tertiary alcohol
Secondary alcohol
Dialkyl ether
Oxacycle
Ether
Organoheterocyclic compound
Alcohol
Organic oxygen compound
Hydrocarbon derivative
Organooxygen compound
Aliphatic heteropolycyclic compound

Molecular Framework

Aliphatic heteropolycyclic compounds

External Descriptors

Not Available

Ontology

Not Available

Physical Properties

State

Not Available

Experimental Molecular Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	3.0e-08 mg/L @ 25 °C (est)	The Good Scents Company Information System
LogP	Not Available	Not Available

Experimental Chromatographic Properties

Not Available

Predicted Molecular Properties

Property	Value	Source
Water Solubility	0.00054 g/L	ALOGPS
logP	8.15	ALOGPS
logP	6.99	ChemAxon
logS	-6	ALOGPS
pKa (Strongest Acidic)	13.69	ChemAxon
pKa (Strongest Basic)	-2.7	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	4	ChemAxon
Hydrogen Donor Count	2	ChemAxon
Polar Surface Area	58.92 Å²	ChemAxon
Rotatable Bond Count	9	ChemAxon
Refractivity	192.2 m³·mol⁻¹	ChemAxon
Polarizability	73.85 Å³	ChemAxon
Number of Rings	4	ChemAxon
Bioavailability	No	ChemAxon
Rule of Five	No	ChemAxon
Ghose Filter	No	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	Yes	ChemAxon

Predicted Chromatographic Properties

Predicted Collision Cross Sections

Predictor	Adduct Type	CCS Value (Å²)	Reference
DarkChem	[M+H]+	248.985	31661259
DarkChem	[M-H]-	248.427	31661259
DeepCCS	[M-2H]-	292.309	30932474
DeepCCS	[M+Na]+	266.496	30932474
AllCCS	[M+H]+	262.5	32859911
AllCCS	[M+H-H2O]+	261.0	32859911
AllCCS	[M+NH4]+	263.9	32859911
AllCCS	[M+Na]+	264.3	32859911
AllCCS	[M-H]-	240.7	32859911
AllCCS	[M+Na-2H]-	245.2	32859911
AllCCS	[M+HCOO]-	250.2	32859911

Predicted Kovats Retention Indices

Underivatized

Metabolite	SMILES	Kovats RI Value	Column Type	Reference
Cucurbitachrome 1	C\C(\C=C\C=C(/C)\C=C\C12OC(CC1(C)C)CC2(C)O)=C/C=C/C=C(\C)/C=C/C=C(\C)C1OC2(C)CC(O)CC(C)(C)C2=C1	5532.6	Standard polar	33892256
Cucurbitachrome 1	C\C(\C=C\C=C(/C)\C=C\C12OC(CC1(C)C)CC2(C)O)=C/C=C/C=C(\C)/C=C/C=C(\C)C1OC2(C)CC(O)CC(C)(C)C2=C1	4450.1	Standard non polar	33892256
Cucurbitachrome 1	C\C(\C=C\C=C(/C)\C=C\C12OC(CC1(C)C)CC2(C)O)=C/C=C/C=C(\C)/C=C/C=C(\C)C1OC2(C)CC(O)CC(C)(C)C2=C1	4476.3	Semi standard non polar	33892256

Derivatized

Derivative Name / Structure	SMILES	Kovats RI Value	Column Type	Reference
Cucurbitachrome 1,1TMS,isomer #1	CC(/C=C/C=C(C)/C=C/C12OC(CC1(C)C)CC2(C)O[Si](C)(C)C)=C\C=C\C=C(C)\C=C\C=C(/C)C1C=C2C(C)(C)CC(O)CC2(C)O1	4371.6	Semi standard non polar	33892256
Cucurbitachrome 1,1TMS,isomer #2	CC(/C=C/C=C(C)/C=C/C12OC(CC1(C)C)CC2(C)O)=C\C=C\C=C(C)\C=C\C=C(/C)C1C=C2C(C)(C)CC(O[Si](C)(C)C)CC2(C)O1	4351.0	Semi standard non polar	33892256
Cucurbitachrome 1,2TMS,isomer #1	CC(/C=C/C=C(C)/C=C/C12OC(CC1(C)C)CC2(C)O[Si](C)(C)C)=C\C=C\C=C(C)\C=C\C=C(/C)C1C=C2C(C)(C)CC(O[Si](C)(C)C)CC2(C)O1	4315.5	Semi standard non polar	33892256
Cucurbitachrome 1,1TBDMS,isomer #1	CC(/C=C/C=C(C)/C=C/C12OC(CC1(C)C)CC2(C)O[Si](C)(C)C(C)(C)C)=C\C=C\C=C(C)\C=C\C=C(/C)C1C=C2C(C)(C)CC(O)CC2(C)O1	4605.9	Semi standard non polar	33892256
Cucurbitachrome 1,1TBDMS,isomer #2	CC(/C=C/C=C(C)/C=C/C12OC(CC1(C)C)CC2(C)O)=C\C=C\C=C(C)\C=C\C=C(/C)C1C=C2C(C)(C)CC(O[Si](C)(C)C(C)(C)C)CC2(C)O1	4590.7	Semi standard non polar	33892256
Cucurbitachrome 1,2TBDMS,isomer #1	CC(/C=C/C=C(C)/C=C/C12OC(CC1(C)C)CC2(C)O[Si](C)(C)C(C)(C)C)=C\C=C\C=C(C)\C=C\C=C(/C)C1C=C2C(C)(C)CC(O[Si](C)(C)C(C)(C)C)CC2(C)O1	4784.8	Semi standard non polar	33892256

Spectra

GC-MS Spectra

Spectrum Type	Description	Splash Key	Deposition Date	Source	View
Predicted GC-MS	Predicted GC-MS Spectrum - Cucurbitachrome 1 GC-MS (Non-derivatized) - 70eV, Positive	splash10-052r-1300190000-3c6db9a02d1a56719b8f	2017-09-01	Wishart Lab	View Spectrum
Predicted GC-MS	Predicted GC-MS Spectrum - Cucurbitachrome 1 GC-MS (TMS_1_1) - 70eV, Positive	Not Available	2021-10-16	Wishart Lab	View Spectrum
Predicted GC-MS	Predicted GC-MS Spectrum - Cucurbitachrome 1 GC-MS (TMS_1_2) - 70eV, Positive	Not Available	2021-10-16	Wishart Lab	View Spectrum
Predicted GC-MS	Predicted GC-MS Spectrum - Cucurbitachrome 1 GC-MS (TMS_2_1) - 70eV, Positive	Not Available	2021-10-16	Wishart Lab	View Spectrum
Predicted GC-MS	Predicted GC-MS Spectrum - Cucurbitachrome 1 GC-MS (TBDMS_1_1) - 70eV, Positive	Not Available	2021-10-16	Wishart Lab	View Spectrum
Predicted GC-MS	Predicted GC-MS Spectrum - Cucurbitachrome 1 GC-MS (TBDMS_1_2) - 70eV, Positive	Not Available	2021-10-16	Wishart Lab	View Spectrum
Predicted GC-MS	Predicted GC-MS Spectrum - Cucurbitachrome 1 GC-MS (TBDMS_2_1) - 70eV, Positive	Not Available	2021-10-16	Wishart Lab	View Spectrum
Predicted GC-MS	Predicted GC-MS Spectrum - Cucurbitachrome 1 GC-MS ("Cucurbitachrome 1,1TMS,#1" TMS) - 70eV, Positive	Not Available	2021-10-20	Wishart Lab	View Spectrum

MS/MS Spectra

Spectrum Type	Description	Splash Key	Deposition Date	Source	View
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - Cucurbitachrome 1 10V, Positive-QTOF	splash10-001i-0466595000-3b6ef0c88f9f05ebad6e	2017-09-01	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - Cucurbitachrome 1 20V, Positive-QTOF	splash10-02u1-1579220000-ea640d60d8fd31cf8a77	2017-09-01	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - Cucurbitachrome 1 40V, Positive-QTOF	splash10-0002-5944300000-7a964cebb6c328f90df0	2017-09-01	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - Cucurbitachrome 1 10V, Negative-QTOF	splash10-0002-0000190000-004f091b9134d3d91f97	2017-09-01	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - Cucurbitachrome 1 20V, Negative-QTOF	splash10-000t-0310090000-3a7b366b6f19a52bc1f0	2017-09-01	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - Cucurbitachrome 1 40V, Negative-QTOF	splash10-0pc9-1911260000-ec53faeca883a6e706f4	2017-09-01	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - Cucurbitachrome 1 10V, Negative-QTOF	splash10-0002-0110090000-634d42e60990a3a2727d	2021-09-23	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - Cucurbitachrome 1 20V, Negative-QTOF	splash10-002b-0214290000-a399abcd88c29927bf92	2021-09-23	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - Cucurbitachrome 1 40V, Negative-QTOF	splash10-0a4l-5229270000-7b4b4454f257e3014abf	2021-09-23	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - Cucurbitachrome 1 10V, Positive-QTOF	splash10-0udi-1113049000-d0b8514dded11386a6fa	2021-09-24	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - Cucurbitachrome 1 20V, Positive-QTOF	splash10-0pbc-9325081000-eb60005540311b4ee8c4	2021-09-24	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - Cucurbitachrome 1 40V, Positive-QTOF	splash10-03gr-1926000000-53e8b8b581abe041e434	2021-09-24	Wishart Lab	View Spectrum

Biological Properties

Cellular Locations

Extracellular
Membrane

Biospecimen Locations

Not Available

Tissue Locations

Not Available

Pathways

Not Available

Name	SMPDB/PathBank	KEGG

Normal Concentrations

Not Available

Abnormal Concentrations

Not Available

Associated Disorders and Diseases

Disease References

None

Associated OMIM IDs

None

External Links

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FooDB ID

FDB021572

KNApSAcK ID

C00022956

Chemspider ID

35015205

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

131753168

PDB ID

Not Available

ChEBI ID

Not Available

Food Biomarker Ontology

Not Available

VMH ID

Not Available

MarkerDB ID

Not Available

Good Scents ID

rw1893521

References

Synthesis Reference

Not Available

Material Safety Data Sheet (MSDS)

Not Available

General References

Simons K, Toomre D: Lipid rafts and signal transduction. Nat Rev Mol Cell Biol. 2000 Oct;1(1):31-9. [PubMed:11413487 ]
Watson AD: Thematic review series: systems biology approaches to metabolic and cardiovascular disorders. Lipidomics: a global approach to lipid analysis in biological systems. J Lipid Res. 2006 Oct;47(10):2101-11. Epub 2006 Aug 10. [PubMed:16902246 ]
Sethi JK, Vidal-Puig AJ: Thematic review series: adipocyte biology. Adipose tissue function and plasticity orchestrate nutritional adaptation. J Lipid Res. 2007 Jun;48(6):1253-62. Epub 2007 Mar 20. [PubMed:17374880 ]
Lingwood D, Simons K: Lipid rafts as a membrane-organizing principle. Science. 2010 Jan 1;327(5961):46-50. doi: 10.1126/science.1174621. [PubMed:20044567 ]
(). Yannai, Shmuel. (2004) Dictionary of food compounds with CD-ROM: Additives, flavors, and ingredients. Boca Raton: Chapman & Hall/CRC.. .
Gunstone, Frank D., John L. Harwood, and Albert J. Dijkstra (2007). The lipid handbook with CD-ROM. CRC Press.

Showing metabocard for Cucurbitachrome 1 (HMDB0041581)

MOL for HMDB0041581 (Cucurbitachrome 1)

3D MOL for HMDB0041581 (Cucurbitachrome 1)

3D SDF for HMDB0041581 (Cucurbitachrome 1)

3D-SDF for HMDB0041581 (Cucurbitachrome 1)

PDB for HMDB0041581 (Cucurbitachrome 1)

3D PDB for HMDB0041581 (Cucurbitachrome 1)

SMILES for HMDB0041581 (Cucurbitachrome 1)

INCHI for HMDB0041581 (Cucurbitachrome 1)

Structure for HMDB0041581 (Cucurbitachrome 1)

3D Structure for HMDB0041581 (Cucurbitachrome 1)

Predicted Collision Cross Sections

Predicted Kovats Retention Indices

Underivatized

Derivatized

GC-MS Spectra

MS/MS Spectra