Hmdb loader
Record Information
Version5.0
StatusDetected but not Quantified
Creation Date2014-10-08 15:54:31 UTC
Update Date2022-03-07 03:17:46 UTC
HMDB IDHMDB0061787
Secondary Accession Numbers
  • HMDB61787
Metabolite Identification
Common Name(3E,5E)-2,6-Dimethyl-1,3,5,7-octatetraene
Description(3E,5E)-2,6-Dimethyl-1,3,5,7-octatetraene belongs to the class of organic compounds known as alkatetraenes. These are acyclic hydrocarbons that contain exactly four carbon-to-carbon double bonds (3E,5E)-2,6-Dimethyl-1,3,5,7-octatetraene is possibly neutral.
Structure
Data?1563866231
SynonymsNot Available
Chemical FormulaC10H14
Average Molecular Weight134.2182
Monoisotopic Molecular Weight134.109550448
IUPAC Name(3E,5E)-2,6-dimethylocta-1,3,5,7-tetraene
Traditional Name(3E,5E)-2,6-dimethylocta-1,3,5,7-tetraene
CAS Registry NumberNot Available
SMILES
[H]\C(=C(\[H])C(C)=C)\C(\[H])=C(/C)C=C
InChI Identifier
InChI=1S/C10H14/c1-5-10(4)8-6-7-9(2)3/h5-8H,1-2H2,3-4H3/b7-6+,10-8+
InChI KeyHPZWSJQQCJZBBG-LQPGMRSMSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as alkatetraenes. These are acyclic hydrocarbons that contain exactly four carbon-to-carbon double bonds.
KingdomOrganic compounds
Super ClassHydrocarbons
ClassUnsaturated hydrocarbons
Sub ClassOlefins
Direct ParentAlkatetraenes
Alternative Parents
Substituents
  • Alkatetraene
  • Branched unsaturated hydrocarbon
  • Unsaturated aliphatic hydrocarbon
  • Aliphatic acyclic compound
Molecular FrameworkAliphatic acyclic compounds
External DescriptorsNot Available
Ontology
Physiological effectNot Available
Disposition
ProcessNot Available
RoleNot Available
Physical Properties
StateNot Available
Experimental Molecular Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
Water Solubility0.09 g/LALOGPS
logP4.05ALOGPS
logP3.18ChemAxon
logS-3.2ALOGPS
Physiological Charge0ChemAxon
Hydrogen Acceptor Count0ChemAxon
Hydrogen Donor Count0ChemAxon
Polar Surface Area0 ŲChemAxon
Rotatable Bond Count3ChemAxon
Refractivity49.5 m³·mol⁻¹ChemAxon
Polarizability17.23 ųChemAxon
Number of Rings0ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterNoChemAxon
Veber's RuleYesChemAxon
MDDR-like RuleNoChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DarkChem[M+H]+134.04831661259
DarkChem[M-H]-131.63131661259
DeepCCS[M+H]+146.46130932474
DeepCCS[M-H]-144.06530932474
DeepCCS[M-2H]-177.19830932474
DeepCCS[M+Na]+152.37430932474
AllCCS[M+H]+129.032859911
AllCCS[M+H-H2O]+124.632859911
AllCCS[M+NH4]+133.032859911
AllCCS[M+Na]+134.232859911
AllCCS[M-H]-125.932859911
AllCCS[M+Na-2H]-128.032859911
AllCCS[M+HCOO]-130.432859911

Predicted Kovats Retention Indices

Underivatized

MetaboliteSMILESKovats RI ValueColumn TypeReference
(3E,5E)-2,6-Dimethyl-1,3,5,7-octatetraene[H]\C(=C(\[H])C(C)=C)\C(\[H])=C(/C)C=C1348.1Standard polar33892256
(3E,5E)-2,6-Dimethyl-1,3,5,7-octatetraene[H]\C(=C(\[H])C(C)=C)\C(\[H])=C(/C)C=C1037.7Standard non polar33892256
(3E,5E)-2,6-Dimethyl-1,3,5,7-octatetraene[H]\C(=C(\[H])C(C)=C)\C(\[H])=C(/C)C=C1059.0Semi standard non polar33892256
Spectra

GC-MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted GC-MSPredicted GC-MS Spectrum - (3E,5E)-2,6-Dimethyl-1,3,5,7-octatetraene GC-MS (Non-derivatized) - 70eV, Positivesplash10-0ge9-9400000000-3231425948a883b9a6652017-09-20Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - (3E,5E)-2,6-Dimethyl-1,3,5,7-octatetraene GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - (3E,5E)-2,6-Dimethyl-1,3,5,7-octatetraene GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (3E,5E)-2,6-Dimethyl-1,3,5,7-octatetraene 10V, Positive-QTOFsplash10-000i-2900000000-c3acac1967fbbef991c92017-10-06Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (3E,5E)-2,6-Dimethyl-1,3,5,7-octatetraene 20V, Positive-QTOFsplash10-0fvr-9300000000-cc93a9b955881c997e112017-10-06Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (3E,5E)-2,6-Dimethyl-1,3,5,7-octatetraene 40V, Positive-QTOFsplash10-0udi-9000000000-e2ebdc9c8c61c190d4b02017-10-06Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (3E,5E)-2,6-Dimethyl-1,3,5,7-octatetraene 10V, Negative-QTOFsplash10-001i-0900000000-5844fcec91a27e2a0f3f2017-10-06Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (3E,5E)-2,6-Dimethyl-1,3,5,7-octatetraene 20V, Negative-QTOFsplash10-001i-0900000000-a75888e8408fee870a7e2017-10-06Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (3E,5E)-2,6-Dimethyl-1,3,5,7-octatetraene 40V, Negative-QTOFsplash10-0159-9800000000-56671560930da69d6a382017-10-06Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (3E,5E)-2,6-Dimethyl-1,3,5,7-octatetraene 10V, Positive-QTOFsplash10-0059-9000000000-ff7f5d6fa230a31e315e2021-09-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (3E,5E)-2,6-Dimethyl-1,3,5,7-octatetraene 20V, Positive-QTOFsplash10-004i-9000000000-bfe1059cb0ae6d6913aa2021-09-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (3E,5E)-2,6-Dimethyl-1,3,5,7-octatetraene 40V, Positive-QTOFsplash10-004i-9000000000-6c542d5b01ed6d6930dd2021-09-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (3E,5E)-2,6-Dimethyl-1,3,5,7-octatetraene 10V, Negative-QTOFsplash10-001i-1900000000-2fcceeb39562a264abf52021-09-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (3E,5E)-2,6-Dimethyl-1,3,5,7-octatetraene 20V, Negative-QTOFsplash10-001i-1900000000-5cc427338ededf7ae6932021-09-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (3E,5E)-2,6-Dimethyl-1,3,5,7-octatetraene 40V, Negative-QTOFsplash10-014i-9000000000-c6d769f155f245cb0bff2021-09-24Wishart LabView Spectrum
Biological Properties
Cellular LocationsNot Available
Biospecimen Locations
  • Saliva
Tissue LocationsNot Available
Pathways
Normal Concentrations
BiospecimenStatusValueAgeSexConditionReferenceDetails
SalivaDetected but not QuantifiedNot QuantifiedAdult (>18 years old)Not SpecifiedNormal details
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDNot Available
KNApSAcK IDNot Available
Chemspider IDNot Available
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound5368451
PDB IDNot Available
ChEBI ID90063
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDNot Available
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General References
  1. Kost C, Tremmel M, Wirth R: Do leaf cutting ants cut undetected? Testing the effect of ant-induced plant defences on foraging decisions in Atta colombica. PLoS One. 2011;6(7):e22340. doi: 10.1371/journal.pone.0022340. Epub 2011 Jul 20. [PubMed:21799831 ]