Record Information |
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Version | 5.0 |
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Status | Expected but not Quantified |
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Creation Date | 2017-03-16 03:42:36 UTC |
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Update Date | 2022-03-07 03:17:52 UTC |
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HMDB ID | HMDB0062310 |
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Secondary Accession Numbers | |
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Metabolite Identification |
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Common Name | 1-(7Z,10Z,13Z,16Z-docosatetraenoyl)-glycero-3-phosphate |
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Description | 1-(7Z,10Z,13Z,16Z-docosatetraenoyl)-glycero-3-phosphate is classified as a member of the 1-acylglycerol-3-phosphates. 1-acylglycerol-3-phosphates are lysophosphatidic acids where the glycerol is esterified with a fatty acid at O-1 position. 1-(7Z,10Z,13Z,16Z-docosatetraenoyl)-glycero-3-phosphate is considered to be practically insoluble (in water) and acidic. 1-(7Z,10Z,13Z,16Z-docosatetraenoyl)-glycero-3-phosphate is a glycerophosphate lipid molecule |
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Structure | [H]\C(CCCCC)=C(/[H])C\C([H])=C(\[H])C\C([H])=C(\[H])C\C([H])=C(\[H])CCCCCC(=O)OC[C@@]([H])(O)COP(O)(O)=O InChI=1S/C25H43O7P/c1-2-3-4-5-6-7-8-9-10-11-12-13-14-15-16-17-18-19-20-21-25(27)31-22-24(26)23-32-33(28,29)30/h6-7,9-10,12-13,15-16,24,26H,2-5,8,11,14,17-23H2,1H3,(H2,28,29,30)/b7-6-,10-9-,13-12-,16-15-/t24-/m1/s1 |
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Synonyms | Value | Source |
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1-(7Z,10Z,13Z,16Z-Docosatetraenoyl)-glycero-3-phosphoric acid | Generator |
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Chemical Formula | C25H43O7P |
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Average Molecular Weight | 486.586 |
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Monoisotopic Molecular Weight | 486.274640723 |
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IUPAC Name | [(2R)-3-[(7Z,10Z,13Z,16Z)-docosa-7,10,13,16-tetraenoyloxy]-2-hydroxypropoxy]phosphonic acid |
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Traditional Name | (2R)-3-[(7Z,10Z,13Z,16Z)-docosa-7,10,13,16-tetraenoyloxy]-2-hydroxypropoxyphosphonic acid |
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CAS Registry Number | Not Available |
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SMILES | [H]\C(CCCCC)=C(/[H])C\C([H])=C(\[H])C\C([H])=C(\[H])C\C([H])=C(\[H])CCCCCC(=O)OC[C@@]([H])(O)COP(O)(O)=O |
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InChI Identifier | InChI=1S/C25H43O7P/c1-2-3-4-5-6-7-8-9-10-11-12-13-14-15-16-17-18-19-20-21-25(27)31-22-24(26)23-32-33(28,29)30/h6-7,9-10,12-13,15-16,24,26H,2-5,8,11,14,17-23H2,1H3,(H2,28,29,30)/b7-6-,10-9-,13-12-,16-15-/t24-/m1/s1 |
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InChI Key | KSDVXYAHZXLGDS-XSQXPFHXSA-N |
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Chemical Taxonomy |
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Description | Belongs to the class of organic compounds known as 1-acylglycerol-3-phosphates. These are lysophosphatidic acids where the glycerol is esterified with a fatty acid at O-1 position. |
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Kingdom | Organic compounds |
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Super Class | Lipids and lipid-like molecules |
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Class | Glycerophospholipids |
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Sub Class | Glycerophosphates |
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Direct Parent | 1-acylglycerol-3-phosphates |
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Alternative Parents | |
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Substituents | - 1-acylglycerol-3-phosphate
- Fatty acid ester
- Monoalkyl phosphate
- Fatty acyl
- Alkyl phosphate
- Phosphoric acid ester
- Organic phosphoric acid derivative
- Carboxylic acid ester
- Secondary alcohol
- Carboxylic acid derivative
- Monocarboxylic acid or derivatives
- Hydrocarbon derivative
- Organic oxide
- Organic oxygen compound
- Carbonyl group
- Alcohol
- Organooxygen compound
- Aliphatic acyclic compound
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Molecular Framework | Aliphatic acyclic compounds |
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External Descriptors | |
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Ontology |
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Physiological effect | Not Available |
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Disposition | |
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Process | Not Available |
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Role | Not Available |
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Physical Properties |
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State | Not Available |
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Experimental Molecular Properties | Property | Value | Reference |
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Melting Point | Not Available | Not Available | Boiling Point | Not Available | Not Available | Water Solubility | 0.0014 g/l | ALOGPS | LogP | 5.67 | ALOGPS |
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Experimental Chromatographic Properties | Not Available |
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Predicted Molecular Properties | | Show more...
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Predicted Chromatographic Properties | Predicted Collision Cross SectionsPredicted Kovats Retention IndicesUnderivatizedDerivatizedDerivative Name / Structure | SMILES | Kovats RI Value | Column Type | Reference |
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1-(7Z,10Z,13Z,16Z-docosatetraenoyl)-glycero-3-phosphate,1TMS,isomer #1 | CCCCC/C=C\C/C=C\C/C=C\C/C=C\CCCCCC(=O)OC[C@H](COP(=O)(O)O)O[Si](C)(C)C | 3685.9 | Semi standard non polar | 33892256 | 1-(7Z,10Z,13Z,16Z-docosatetraenoyl)-glycero-3-phosphate,1TMS,isomer #2 | CCCCC/C=C\C/C=C\C/C=C\C/C=C\CCCCCC(=O)OC[C@@H](O)COP(=O)(O)O[Si](C)(C)C | 3648.0 | Semi standard non polar | 33892256 | 1-(7Z,10Z,13Z,16Z-docosatetraenoyl)-glycero-3-phosphate,2TMS,isomer #1 | CCCCC/C=C\C/C=C\C/C=C\C/C=C\CCCCCC(=O)OC[C@H](COP(=O)(O)O[Si](C)(C)C)O[Si](C)(C)C | 3658.9 | Semi standard non polar | 33892256 | 1-(7Z,10Z,13Z,16Z-docosatetraenoyl)-glycero-3-phosphate,2TMS,isomer #1 | CCCCC/C=C\C/C=C\C/C=C\C/C=C\CCCCCC(=O)OC[C@H](COP(=O)(O)O[Si](C)(C)C)O[Si](C)(C)C | 3347.4 | Standard non polar | 33892256 | 1-(7Z,10Z,13Z,16Z-docosatetraenoyl)-glycero-3-phosphate,2TMS,isomer #1 | CCCCC/C=C\C/C=C\C/C=C\C/C=C\CCCCCC(=O)OC[C@H](COP(=O)(O)O[Si](C)(C)C)O[Si](C)(C)C | 4108.8 | Standard polar | 33892256 | 1-(7Z,10Z,13Z,16Z-docosatetraenoyl)-glycero-3-phosphate,2TMS,isomer #2 | CCCCC/C=C\C/C=C\C/C=C\C/C=C\CCCCCC(=O)OC[C@@H](O)COP(=O)(O[Si](C)(C)C)O[Si](C)(C)C | 3626.3 | Semi standard non polar | 33892256 | 1-(7Z,10Z,13Z,16Z-docosatetraenoyl)-glycero-3-phosphate,2TMS,isomer #2 | CCCCC/C=C\C/C=C\C/C=C\C/C=C\CCCCCC(=O)OC[C@@H](O)COP(=O)(O[Si](C)(C)C)O[Si](C)(C)C | 3353.0 | Standard non polar | 33892256 | 1-(7Z,10Z,13Z,16Z-docosatetraenoyl)-glycero-3-phosphate,2TMS,isomer #2 | CCCCC/C=C\C/C=C\C/C=C\C/C=C\CCCCCC(=O)OC[C@@H](O)COP(=O)(O[Si](C)(C)C)O[Si](C)(C)C | 3867.8 | Standard polar | 33892256 | 1-(7Z,10Z,13Z,16Z-docosatetraenoyl)-glycero-3-phosphate,3TMS,isomer #1 | CCCCC/C=C\C/C=C\C/C=C\C/C=C\CCCCCC(=O)OC[C@H](COP(=O)(O[Si](C)(C)C)O[Si](C)(C)C)O[Si](C)(C)C | 3649.5 | Semi standard non polar | 33892256 | 1-(7Z,10Z,13Z,16Z-docosatetraenoyl)-glycero-3-phosphate,3TMS,isomer #1 | CCCCC/C=C\C/C=C\C/C=C\C/C=C\CCCCCC(=O)OC[C@H](COP(=O)(O[Si](C)(C)C)O[Si](C)(C)C)O[Si](C)(C)C | 3363.6 | Standard non polar | 33892256 | 1-(7Z,10Z,13Z,16Z-docosatetraenoyl)-glycero-3-phosphate,3TMS,isomer #1 | CCCCC/C=C\C/C=C\C/C=C\C/C=C\CCCCCC(=O)OC[C@H](COP(=O)(O[Si](C)(C)C)O[Si](C)(C)C)O[Si](C)(C)C | 3530.3 | Standard polar | 33892256 | 1-(7Z,10Z,13Z,16Z-docosatetraenoyl)-glycero-3-phosphate,1TBDMS,isomer #1 | CCCCC/C=C\C/C=C\C/C=C\C/C=C\CCCCCC(=O)OC[C@H](COP(=O)(O)O)O[Si](C)(C)C(C)(C)C | 3920.2 | Semi standard non polar | 33892256 | 1-(7Z,10Z,13Z,16Z-docosatetraenoyl)-glycero-3-phosphate,1TBDMS,isomer #2 | CCCCC/C=C\C/C=C\C/C=C\C/C=C\CCCCCC(=O)OC[C@@H](O)COP(=O)(O)O[Si](C)(C)C(C)(C)C | 3861.2 | Semi standard non polar | 33892256 | 1-(7Z,10Z,13Z,16Z-docosatetraenoyl)-glycero-3-phosphate,2TBDMS,isomer #1 | CCCCC/C=C\C/C=C\C/C=C\C/C=C\CCCCCC(=O)OC[C@H](COP(=O)(O)O[Si](C)(C)C(C)(C)C)O[Si](C)(C)C(C)(C)C | 4099.6 | Semi standard non polar | 33892256 | 1-(7Z,10Z,13Z,16Z-docosatetraenoyl)-glycero-3-phosphate,2TBDMS,isomer #1 | CCCCC/C=C\C/C=C\C/C=C\C/C=C\CCCCCC(=O)OC[C@H](COP(=O)(O)O[Si](C)(C)C(C)(C)C)O[Si](C)(C)C(C)(C)C | 3663.3 | Standard non polar | 33892256 | 1-(7Z,10Z,13Z,16Z-docosatetraenoyl)-glycero-3-phosphate,2TBDMS,isomer #1 | CCCCC/C=C\C/C=C\C/C=C\C/C=C\CCCCCC(=O)OC[C@H](COP(=O)(O)O[Si](C)(C)C(C)(C)C)O[Si](C)(C)C(C)(C)C | 4116.5 | Standard polar | 33892256 | 1-(7Z,10Z,13Z,16Z-docosatetraenoyl)-glycero-3-phosphate,2TBDMS,isomer #2 | CCCCC/C=C\C/C=C\C/C=C\C/C=C\CCCCCC(=O)OC[C@@H](O)COP(=O)(O[Si](C)(C)C(C)(C)C)O[Si](C)(C)C(C)(C)C | 4066.6 | Semi standard non polar | 33892256 | 1-(7Z,10Z,13Z,16Z-docosatetraenoyl)-glycero-3-phosphate,2TBDMS,isomer #2 | CCCCC/C=C\C/C=C\C/C=C\C/C=C\CCCCCC(=O)OC[C@@H](O)COP(=O)(O[Si](C)(C)C(C)(C)C)O[Si](C)(C)C(C)(C)C | 3638.2 | Standard non polar | 33892256 | 1-(7Z,10Z,13Z,16Z-docosatetraenoyl)-glycero-3-phosphate,2TBDMS,isomer #2 | CCCCC/C=C\C/C=C\C/C=C\C/C=C\CCCCCC(=O)OC[C@@H](O)COP(=O)(O[Si](C)(C)C(C)(C)C)O[Si](C)(C)C(C)(C)C | 3951.8 | Standard polar | 33892256 | 1-(7Z,10Z,13Z,16Z-docosatetraenoyl)-glycero-3-phosphate,3TBDMS,isomer #1 | CCCCC/C=C\C/C=C\C/C=C\C/C=C\CCCCCC(=O)OC[C@H](COP(=O)(O[Si](C)(C)C(C)(C)C)O[Si](C)(C)C(C)(C)C)O[Si](C)(C)C(C)(C)C | 4285.2 | Semi standard non polar | 33892256 | 1-(7Z,10Z,13Z,16Z-docosatetraenoyl)-glycero-3-phosphate,3TBDMS,isomer #1 | CCCCC/C=C\C/C=C\C/C=C\C/C=C\CCCCCC(=O)OC[C@H](COP(=O)(O[Si](C)(C)C(C)(C)C)O[Si](C)(C)C(C)(C)C)O[Si](C)(C)C(C)(C)C | 3750.4 | Standard non polar | 33892256 | 1-(7Z,10Z,13Z,16Z-docosatetraenoyl)-glycero-3-phosphate,3TBDMS,isomer #1 | CCCCC/C=C\C/C=C\C/C=C\C/C=C\CCCCCC(=O)OC[C@H](COP(=O)(O[Si](C)(C)C(C)(C)C)O[Si](C)(C)C(C)(C)C)O[Si](C)(C)C(C)(C)C | 3662.2 | Standard polar | 33892256 |
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Spectra |
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| GC-MS SpectraSpectrum Type | Description | Splash Key | Deposition Date | Source | View |
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Predicted GC-MS | Predicted GC-MS Spectrum - 1-(7Z,10Z,13Z,16Z-docosatetraenoyl)-glycero-3-phosphate GC-MS (1 TMS) - 70eV, Positive | splash10-01p2-9241000000-7b5965b27f9cb6ef4b2d | 2017-10-06 | Wishart Lab | View Spectrum | Predicted GC-MS | Predicted GC-MS Spectrum - 1-(7Z,10Z,13Z,16Z-docosatetraenoyl)-glycero-3-phosphate GC-MS (Non-derivatized) - 70eV, Positive | Not Available | 2021-10-12 | Wishart Lab | View Spectrum | Predicted GC-MS | Predicted GC-MS Spectrum - 1-(7Z,10Z,13Z,16Z-docosatetraenoyl)-glycero-3-phosphate GC-MS (Non-derivatized) - 70eV, Positive | Not Available | 2021-10-12 | Wishart Lab | View Spectrum |
MS/MS SpectraSpectrum Type | Description | Splash Key | Deposition Date | Source | View |
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Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - 1-(7Z,10Z,13Z,16Z-docosatetraenoyl)-glycero-3-phosphate 10V, Positive-QTOF | splash10-000i-0000900000-601aafd57da011fd1be4 | 2021-09-22 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - 1-(7Z,10Z,13Z,16Z-docosatetraenoyl)-glycero-3-phosphate 20V, Positive-QTOF | splash10-000i-0000900000-601aafd57da011fd1be4 | 2021-09-22 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - 1-(7Z,10Z,13Z,16Z-docosatetraenoyl)-glycero-3-phosphate 40V, Positive-QTOF | splash10-01b9-0905700000-6bafdd5f860494d6ad2c | 2021-09-22 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - 1-(7Z,10Z,13Z,16Z-docosatetraenoyl)-glycero-3-phosphate 10V, Negative-QTOF | splash10-000i-0000900000-292b722796d315e5d3dc | 2021-09-22 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - 1-(7Z,10Z,13Z,16Z-docosatetraenoyl)-glycero-3-phosphate 20V, Negative-QTOF | splash10-000i-0000900000-292b722796d315e5d3dc | 2021-09-22 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - 1-(7Z,10Z,13Z,16Z-docosatetraenoyl)-glycero-3-phosphate 40V, Negative-QTOF | splash10-0uei-2905600000-9fe63f94338559adab71 | 2021-09-22 | Wishart Lab | View Spectrum |
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Biological Properties |
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Cellular Locations | Not Available |
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Biospecimen Locations | Not Available |
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Tissue Locations | Not Available |
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Pathways | |
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Normal Concentrations |
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Abnormal Concentrations |
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Associated Disorders and Diseases |
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Disease References | None |
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Associated OMIM IDs | None |
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External Links |
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DrugBank ID | Not Available |
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Phenol Explorer Compound ID | Not Available |
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FooDB ID | Not Available |
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KNApSAcK ID | Not Available |
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Chemspider ID | Not Available |
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KEGG Compound ID | Not Available |
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BioCyc ID | Not Available |
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BiGG ID | Not Available |
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Wikipedia Link | Not Available |
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METLIN ID | Not Available |
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PubChem Compound | 52929754 |
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PDB ID | Not Available |
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ChEBI ID | Not Available |
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Food Biomarker Ontology | Not Available |
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VMH ID | Not Available |
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MarkerDB ID | Not Available |
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Good Scents ID | Not Available |
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References |
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Synthesis Reference | Not Available |
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Material Safety Data Sheet (MSDS) | Not Available |
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General References | - Moritz A, De Graan PN, Gispen WH, Wirtz KW: Phosphatidic acid is a specific activator of phosphatidylinositol-4-phosphate kinase. J Biol Chem. 1992 Apr 15;267(11):7207-10. [PubMed:1313792 ]
- Simons K, Toomre D: Lipid rafts and signal transduction. Nat Rev Mol Cell Biol. 2000 Oct;1(1):31-9. [PubMed:11413487 ]
- Watson AD: Thematic review series: systems biology approaches to metabolic and cardiovascular disorders. Lipidomics: a global approach to lipid analysis in biological systems. J Lipid Res. 2006 Oct;47(10):2101-11. Epub 2006 Aug 10. [PubMed:16902246 ]
- Sethi JK, Vidal-Puig AJ: Thematic review series: adipocyte biology. Adipose tissue function and plasticity orchestrate nutritional adaptation. J Lipid Res. 2007 Jun;48(6):1253-62. Epub 2007 Mar 20. [PubMed:17374880 ]
- Lingwood D, Simons K: Lipid rafts as a membrane-organizing principle. Science. 2010 Jan 1;327(5961):46-50. doi: 10.1126/science.1174621. [PubMed:20044567 ]
- Divecha N, Irvine RF: Phospholipid signaling. Cell. 1995 Jan 27;80(2):269-78. [PubMed:7834746 ]
- Moolenaar WH, Kruijer W, Tilly BC, Verlaan I, Bierman AJ, de Laat SW: Growth factor-like action of phosphatidic acid. Nature. 1986 Sep 11-17;323(6084):171-3. [PubMed:3748188 ]
- Yang CY, Frohman MA: Mitochondria: signaling with phosphatidic acid. Int J Biochem Cell Biol. 2012 Aug;44(8):1346-50. doi: 10.1016/j.biocel.2012.05.006. Epub 2012 May 15. [PubMed:22609101 ]
- Cevc, Gregor (1993). Phospholipids Handbook. Marcel Dekker.
- Gunstone, Frank D., John L. Harwood, and Albert J. Dijkstra (2007). The lipid handbook with CD-ROM. CRC Press.
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