| Record Information |
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| Version | 5.0 |
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| Status | Detected but not Quantified |
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| Creation Date | 2005-11-16 15:48:42 UTC |
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| Update Date | 2023-02-21 17:15:00 UTC |
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| HMDB ID | HMDB0000624 |
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| Secondary Accession Numbers | |
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| Metabolite Identification |
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| Common Name | D-Leucic acid |
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| Description | D-Leucic acid is an alpha-hydroxycarboxylic acid present in patients affected with Short-bowel syndrome (an Inborn errors of metabolism, OMIM 175200 ) (PMID 9766851 ), and in Maple Syrup Urine Disease (MSUD, an autosomal recessive inherited metabolic disorder of branched-chain amino acid) (PMID 9766851 ). |
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| Structure | InChI=1S/C6H12O3/c1-4(2)3-5(7)6(8)9/h4-5,7H,3H2,1-2H3,(H,8,9)/t5-/m1/s1 |
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| Synonyms | | Value | Source |
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| (R)-2-Hydroxy-4-methylvaleric acid | ChEBI | | (R)-2-Hydroxyisocaproic acid | ChEBI | | (R)-Leucic acid | ChEBI | | 2-Hydroxy-4-methyl-D-valeric acid | ChEBI | | alpha-Hydroxyisocaproic acid | ChEBI | | D-2-Hydroxy-4-methylpentanoic acid | ChEBI | | D-2-Hydroxy-4-methylvaleric acid | ChEBI | | D-2-Hydroxyisocaproic acid | ChEBI | | delta-Leucic acid | ChEBI | | Leucic acid | ChEBI | | D-2-Hydroxyisocaproate | Kegg | | (R)-2-Hydroxy-4-methylpentanoate | Kegg | | D-Leucate | Kegg | | (R)-2-Hydroxy-4-methylvalerate | Generator | | (R)-2-Hydroxyisocaproate | Generator | | (R)-Leucate | Generator | | 2-Hydroxy-4-methyl-D-valerate | Generator | | a-Hydroxyisocaproate | Generator | | a-Hydroxyisocaproic acid | Generator | | alpha-Hydroxyisocaproate | Generator | | Α-hydroxyisocaproate | Generator | | Α-hydroxyisocaproic acid | Generator | | D-2-Hydroxy-4-methylpentanoate | Generator | | D-2-Hydroxy-4-methylvalerate | Generator | | delta-Leucate | Generator | | Δ-leucate | Generator | | Δ-leucic acid | Generator | | Leucate | Generator | | (R)-2-Hydroxy-4-methylpentanoic acid | Generator | | (-)-2-Hydroxyisocaproate | HMDB | | (-)-2-Hydroxyisocaproic acid | HMDB | | (-)-a-Hydroxyisocaproate | HMDB | | (-)-a-Hydroxyisocaproic acid | HMDB | | (-)-alpha-Hydroxyisocaproate | HMDB | | (-)-alpha-Hydroxyisocaproic acid | HMDB | | (R)-2-Hydroxy-4-methyl-pentanoate | HMDB | | (R)-2-Hydroxy-4-methyl-pentanoic acid | HMDB | | 2-Hydroxy-4-methyl-delta-valerate | HMDB | | 2-Hydroxy-4-methyl-delta-valeric acid | HMDB | | D-a-Hydroxyisocaproate | HMDB | | D-a-Hydroxyisocaproic acid | HMDB | | delta-2-Hydroxy-4-methylpentanoate | HMDB | | delta-2-Hydroxy-4-methylpentanoic acid | HMDB | | delta-2-Hydroxy-4-methylvalerate | HMDB | | delta-2-Hydroxy-4-methylvaleric acid | HMDB | | delta-2-Hydroxyisocaproate | HMDB | | delta-2-Hydroxyisocaproic acid | HMDB | | delta-alpha-Hydroxyisocaproate | HMDB | | delta-alpha-Hydroxyisocaproic acid | HMDB |
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| Chemical Formula | C6H12O3 |
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| Average Molecular Weight | 132.1577 |
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| Monoisotopic Molecular Weight | 132.07864425 |
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| IUPAC Name | (2R)-2-hydroxy-4-methylpentanoic acid |
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| Traditional Name | (-)-α-hydroxyisocaproate |
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| CAS Registry Number | 20312-37-2 |
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| SMILES | CC(C)C[C@@H](O)C(O)=O |
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| InChI Identifier | InChI=1S/C6H12O3/c1-4(2)3-5(7)6(8)9/h4-5,7H,3H2,1-2H3,(H,8,9)/t5-/m1/s1 |
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| InChI Key | LVRFTAZAXQPQHI-RXMQYKEDSA-N |
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| Chemical Taxonomy |
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| Description | Belongs to the class of organic compounds known as hydroxy fatty acids. These are fatty acids in which the chain bears a hydroxyl group. |
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| Kingdom | Organic compounds |
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| Super Class | Lipids and lipid-like molecules |
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| Class | Fatty Acyls |
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| Sub Class | Fatty acids and conjugates |
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| Direct Parent | Hydroxy fatty acids |
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| Alternative Parents | |
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| Substituents | - Branched fatty acid
- Hydroxy fatty acid
- Methyl-branched fatty acid
- Alpha-hydroxy acid
- Hydroxy acid
- Secondary alcohol
- Monocarboxylic acid or derivatives
- Carboxylic acid
- Carboxylic acid derivative
- Organooxygen compound
- Carbonyl group
- Alcohol
- Hydrocarbon derivative
- Organic oxide
- Organic oxygen compound
- Aliphatic acyclic compound
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| Molecular Framework | Aliphatic acyclic compounds |
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| External Descriptors | |
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| Ontology |
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| Physiological effect | Not Available |
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| Disposition | |
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| Process | |
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| Role | |
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| Physical Properties |
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| State | Solid |
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| Experimental Molecular Properties | |
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| Experimental Chromatographic Properties | Not Available |
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| Predicted Molecular Properties | |
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| Predicted Chromatographic Properties | Predicted Collision Cross SectionsPredicted Retention Times Underivatized| Chromatographic Method | Retention Time | Reference |
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| Measured using a Waters Acquity ultraperformance liquid chromatography (UPLC) ethylene-bridged hybrid (BEH) C18 column (100 mm × 2.1 mm; 1.7 μmparticle diameter). Predicted by Afia on May 17, 2022. Predicted by Afia on May 17, 2022. | 2.07 minutes | 32390414 | | Predicted by Siyang on May 30, 2022 | 11.003 minutes | 33406817 | | Predicted by Siyang using ReTip algorithm on June 8, 2022 | 2.24 minutes | 32390414 | | AjsUoB = Accucore 150 Amide HILIC with 10mM Ammonium Formate, 0.1% Formic Acid | 61.2 seconds | 40023050 | | Fem_Long = Waters ACQUITY UPLC HSS T3 C18 with Water:MeOH and 0.1% Formic Acid | 1362.3 seconds | 40023050 | | Fem_Lipids = Ascentis Express C18 with (60:40 water:ACN):(90:10 IPA:ACN) and 10mM NH4COOH + 0.1% Formic Acid | 360.1 seconds | 40023050 | | Life_Old = Waters ACQUITY UPLC BEH C18 with Water:(20:80 acetone:ACN) and 0.1% Formic Acid | 100.7 seconds | 40023050 | | Life_New = RP Waters ACQUITY UPLC HSS T3 C18 with Water:(30:70 MeOH:ACN) and 0.1% Formic Acid | 213.4 seconds | 40023050 | | RIKEN = Waters ACQUITY UPLC BEH C18 with Water:ACN and 0.1% Formic Acid | 82.0 seconds | 40023050 | | Eawag_XBridgeC18 = XBridge C18 3.5u 2.1x50 mm with Water:MeOH and 0.1% Formic Acid | 401.2 seconds | 40023050 | | BfG_NTS_RP1 =Agilent Zorbax Eclipse Plus C18 (2.1 mm x 150 mm, 3.5 um) with Water:ACN and 0.1% Formic Acid | 420.8 seconds | 40023050 | | HILIC_BDD_2 = Merck SeQuant ZIC-HILIC with ACN(0.1% formic acid):water(16 mM ammonium formate) | 98.1 seconds | 40023050 | | UniToyama_Atlantis = RP Waters Atlantis T3 (2.1 x 150 mm, 5 um) with ACN:Water and 0.1% Formic Acid | 768.2 seconds | 40023050 | | BDD_C18 = Hypersil Gold 1.9µm C18 with Water:ACN and 0.1% Formic Acid | 330.8 seconds | 40023050 | | UFZ_Phenomenex = Kinetex Core-Shell C18 2.6 um, 3.0 x 100 mm, Phenomenex with Water:MeOH and 0.1% Formic Acid | 1122.2 seconds | 40023050 | | SNU_RIKEN_POS = Waters ACQUITY UPLC BEH C18 with Water:ACN and 0.1% Formic Acid | 248.5 seconds | 40023050 | | RPMMFDA = Waters ACQUITY UPLC BEH C18 with Water:ACN and 0.1% Formic Acid | 306.7 seconds | 40023050 | | MTBLS87 = Merck SeQuant ZIC-pHILIC column with ACN:Water and :ammonium carbonate | 420.3 seconds | 40023050 | | KI_GIAR_zic_HILIC_pH2_7 = Merck SeQuant ZIC-HILIC with ACN:Water and 0.1% FA | 281.5 seconds | 40023050 | | Meister zic-pHILIC pH9.3 = Merck SeQuant ZIC-pHILIC column with ACN:Water 5mM NH4Ac pH9.3 and 5mM ammonium acetate in water | 131.5 seconds | 40023050 |
Predicted Kovats Retention IndicesUnderivatizedDerivatized| Derivative Name / Structure | SMILES | Kovats RI Value | Column Type | Reference |
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| D-Leucic acid,1TMS,isomer #1 | CC(C)C[C@@H](O[Si](C)(C)C)C(=O)O | 1189.3 | Semi standard non polar | 33892256 | | D-Leucic acid,1TMS,isomer #2 | CC(C)C[C@@H](O)C(=O)O[Si](C)(C)C | 1121.8 | Semi standard non polar | 33892256 | | D-Leucic acid,2TMS,isomer #1 | CC(C)C[C@@H](O[Si](C)(C)C)C(=O)O[Si](C)(C)C | 1237.3 | Semi standard non polar | 33892256 | | D-Leucic acid,1TBDMS,isomer #1 | CC(C)C[C@@H](O[Si](C)(C)C(C)(C)C)C(=O)O | 1404.6 | Semi standard non polar | 33892256 | | D-Leucic acid,1TBDMS,isomer #2 | CC(C)C[C@@H](O)C(=O)O[Si](C)(C)C(C)(C)C | 1356.0 | Semi standard non polar | 33892256 | | D-Leucic acid,2TBDMS,isomer #1 | CC(C)C[C@@H](O[Si](C)(C)C(C)(C)C)C(=O)O[Si](C)(C)C(C)(C)C | 1676.3 | Semi standard non polar | 33892256 |
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| GC-MS Spectra| Spectrum Type | Description | Splash Key | Deposition Date | Source | View |
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| Predicted GC-MS | Predicted GC-MS Spectrum - D-Leucic acid GC-MS (Non-derivatized) - 70eV, Positive | splash10-0006-9000000000-866999574fff80fabad1 | 2017-09-01 | Wishart Lab | View Spectrum | | Predicted GC-MS | Predicted GC-MS Spectrum - D-Leucic acid GC-MS (2 TMS) - 70eV, Positive | splash10-02gc-9440000000-7fffd162011678b17f4a | 2017-10-06 | Wishart Lab | View Spectrum | | Predicted GC-MS | Predicted GC-MS Spectrum - D-Leucic acid GC-MS (Non-derivatized) - 70eV, Positive | Not Available | 2021-10-12 | Wishart Lab | View Spectrum | | Predicted GC-MS | Predicted GC-MS Spectrum - D-Leucic acid GC-MS (TMS_1_1) - 70eV, Positive | Not Available | 2021-11-05 | Wishart Lab | View Spectrum | | Predicted GC-MS | Predicted GC-MS Spectrum - D-Leucic acid GC-MS (TMS_1_2) - 70eV, Positive | Not Available | 2021-11-05 | Wishart Lab | View Spectrum | | Predicted GC-MS | Predicted GC-MS Spectrum - D-Leucic acid GC-MS (TBDMS_1_1) - 70eV, Positive | Not Available | 2021-11-05 | Wishart Lab | View Spectrum | | Predicted GC-MS | Predicted GC-MS Spectrum - D-Leucic acid GC-MS (TBDMS_1_2) - 70eV, Positive | Not Available | 2021-11-05 | Wishart Lab | View Spectrum | | Predicted GC-MS | Predicted GC-MS Spectrum - D-Leucic acid GC-MS (TBDMS_2_1) - 70eV, Positive | Not Available | 2021-11-05 | Wishart Lab | View Spectrum |
MS/MS Spectra| Spectrum Type | Description | Splash Key | Deposition Date | Source | View |
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| Experimental LC-MS/MS | LC-MS/MS Spectrum - D-Leucic acid LC-ESI-QQ , negative-QTOF | splash10-001i-0900000000-74d5e5f39ea37f777aca | 2017-09-14 | HMDB team, MONA | View Spectrum | | Experimental LC-MS/MS | LC-MS/MS Spectrum - D-Leucic acid LC-ESI-QQ , negative-QTOF | splash10-0019-9500000000-7c7c7dc2d6548a20789d | 2017-09-14 | HMDB team, MONA | View Spectrum | | Experimental LC-MS/MS | LC-MS/MS Spectrum - D-Leucic acid LC-ESI-QQ , negative-QTOF | splash10-00kr-9000000000-226ab1053ca4714d6bc1 | 2017-09-14 | HMDB team, MONA | View Spectrum | | Experimental LC-MS/MS | LC-MS/MS Spectrum - D-Leucic acid LC-ESI-QQ , negative-QTOF | splash10-014i-9000000000-027f1c6ebbf703c13661 | 2017-09-14 | HMDB team, MONA | View Spectrum | | Experimental LC-MS/MS | LC-MS/MS Spectrum - D-Leucic acid LC-ESI-QQ , negative-QTOF | splash10-014i-9000000000-6217c9555a8c971b5dee | 2017-09-14 | HMDB team, MONA | View Spectrum | | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - D-Leucic acid 10V, Positive-QTOF | splash10-0159-5900000000-01e9c211c49cea6fc5c6 | 2017-09-01 | Wishart Lab | View Spectrum | | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - D-Leucic acid 20V, Positive-QTOF | splash10-0ap0-9300000000-a1f6fc289aa530d63fd8 | 2017-09-01 | Wishart Lab | View Spectrum | | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - D-Leucic acid 40V, Positive-QTOF | splash10-0a4i-9000000000-eb5a5d102c8e756f6834 | 2017-09-01 | Wishart Lab | View Spectrum | | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - D-Leucic acid 10V, Negative-QTOF | splash10-001i-2900000000-1a66b9767516fbd45630 | 2017-09-01 | Wishart Lab | View Spectrum | | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - D-Leucic acid 20V, Negative-QTOF | splash10-06s9-9400000000-cf71f1c20e2a87bbb2b0 | 2017-09-01 | Wishart Lab | View Spectrum | | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - D-Leucic acid 40V, Negative-QTOF | splash10-0a4i-9000000000-11e049c8df5b1a6268c9 | 2017-09-01 | Wishart Lab | View Spectrum | | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - D-Leucic acid 10V, Negative-QTOF | splash10-0019-9700000000-a7d0b1ce1c211b31bc0d | 2021-09-24 | Wishart Lab | View Spectrum | | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - D-Leucic acid 20V, Negative-QTOF | splash10-00kr-9100000000-504826b66e199a65ef09 | 2021-09-24 | Wishart Lab | View Spectrum | | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - D-Leucic acid 40V, Negative-QTOF | splash10-014l-9000000000-ccecb4a470c359949fec | 2021-09-24 | Wishart Lab | View Spectrum | | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - D-Leucic acid 10V, Positive-QTOF | splash10-014i-9000000000-3019a9d0620e7da01963 | 2021-09-24 | Wishart Lab | View Spectrum | | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - D-Leucic acid 20V, Positive-QTOF | splash10-00kf-9000000000-e587d44396e53f2409fa | 2021-09-24 | Wishart Lab | View Spectrum | | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - D-Leucic acid 40V, Positive-QTOF | splash10-0006-9000000000-457ece1d510dad645c89 | 2021-09-24 | Wishart Lab | View Spectrum |
NMR Spectra| Spectrum Type | Description | Deposition Date | Source | View |
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| Predicted 1D NMR | 13C NMR Spectrum (1D, 100 MHz, D2O, predicted) | 2021-09-16 | Wishart Lab | View Spectrum | | Predicted 1D NMR | 1H NMR Spectrum (1D, 100 MHz, D2O, predicted) | 2021-09-16 | Wishart Lab | View Spectrum | | Predicted 1D NMR | 13C NMR Spectrum (1D, 200 MHz, D2O, predicted) | 2021-09-16 | Wishart Lab | View Spectrum | | Predicted 1D NMR | 1H NMR Spectrum (1D, 200 MHz, D2O, predicted) | 2021-09-16 | Wishart Lab | View Spectrum | | Predicted 1D NMR | 13C NMR Spectrum (1D, 300 MHz, D2O, predicted) | 2021-09-16 | Wishart Lab | View Spectrum | | Predicted 1D NMR | 1H NMR Spectrum (1D, 300 MHz, D2O, predicted) | 2021-09-16 | Wishart Lab | View Spectrum | | Predicted 1D NMR | 13C NMR Spectrum (1D, 400 MHz, D2O, predicted) | 2021-09-16 | Wishart Lab | View Spectrum | | Predicted 1D NMR | 1H NMR Spectrum (1D, 400 MHz, D2O, predicted) | 2021-09-16 | Wishart Lab | View Spectrum | | Predicted 1D NMR | 13C NMR Spectrum (1D, 500 MHz, D2O, predicted) | 2021-09-16 | Wishart Lab | View Spectrum | | Predicted 1D NMR | 1H NMR Spectrum (1D, 500 MHz, D2O, predicted) | 2021-09-16 | Wishart Lab | View Spectrum | | Predicted 1D NMR | 13C NMR Spectrum (1D, 600 MHz, D2O, predicted) | 2021-09-16 | Wishart Lab | View Spectrum | | Predicted 1D NMR | 1H NMR Spectrum (1D, 600 MHz, D2O, predicted) | 2021-09-16 | Wishart Lab | View Spectrum | | Predicted 1D NMR | 13C NMR Spectrum (1D, 700 MHz, D2O, predicted) | 2021-09-16 | Wishart Lab | View Spectrum | | Predicted 1D NMR | 1H NMR Spectrum (1D, 700 MHz, D2O, predicted) | 2021-09-16 | Wishart Lab | View Spectrum | | Predicted 1D NMR | 13C NMR Spectrum (1D, 800 MHz, D2O, predicted) | 2021-09-16 | Wishart Lab | View Spectrum | | Predicted 1D NMR | 1H NMR Spectrum (1D, 800 MHz, D2O, predicted) | 2021-09-16 | Wishart Lab | View Spectrum | | Predicted 1D NMR | 13C NMR Spectrum (1D, 900 MHz, D2O, predicted) | 2021-09-16 | Wishart Lab | View Spectrum | | Predicted 1D NMR | 1H NMR Spectrum (1D, 900 MHz, D2O, predicted) | 2021-09-16 | Wishart Lab | View Spectrum | | Predicted 1D NMR | 13C NMR Spectrum (1D, 1000 MHz, D2O, predicted) | 2021-09-16 | Wishart Lab | View Spectrum | | Predicted 1D NMR | 1H NMR Spectrum (1D, 1000 MHz, D2O, predicted) | 2021-09-16 | Wishart Lab | View Spectrum |
IR Spectra| Spectrum Type | Description | Deposition Date | Source | View |
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| Predicted IR Spectrum | IR Ion Spectrum (Predicted IRIS Spectrum, Adduct: [M-H]-) | 2023-02-03 | FELIX lab | View Spectrum | | Predicted IR Spectrum | IR Ion Spectrum (Predicted IRIS Spectrum, Adduct: [M+H]+) | 2023-02-03 | FELIX lab | View Spectrum | | Predicted IR Spectrum | IR Ion Spectrum (Predicted IRIS Spectrum, Adduct: [M+Na]+) | 2023-02-03 | FELIX lab | View Spectrum |
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