Hmdb loader
Record Information
Version5.0
StatusExpected but not Quantified
Creation Date2017-03-23 04:38:38 UTC
Update Date2022-03-07 03:17:57 UTC
HMDB IDHMDB0062604
Secondary Accession Numbers
  • HMDB62604
Metabolite Identification
Common Name3,5-dimethyloctane
Description3,5-dimethyloctane belongs to the class of organic compounds known as branched alkanes. These are acyclic branched hydrocarbons having the general formula CnH2n+2. 3,5-dimethyloctane is possibly neutral.
Structure
Data?1563866335
SynonymsNot Available
Chemical FormulaC10H22
Average Molecular Weight142.286
Monoisotopic Molecular Weight142.172150708
IUPAC Name3,5-dimethyloctane
Traditional Nameoctane, 3,5-dimethyl-
CAS Registry Number15869-93-9
SMILES
CCCC(C)CC(C)CC
InChI Identifier
InChI=1S/C10H22/c1-5-7-10(4)8-9(3)6-2/h9-10H,5-8H2,1-4H3
InChI KeyVRHRGVJOUHJULC-UHFFFAOYSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as branched alkanes. These are acyclic branched hydrocarbons having the general formula CnH2n+2.
KingdomOrganic compounds
Super ClassHydrocarbons
ClassSaturated hydrocarbons
Sub ClassAlkanes
Direct ParentBranched alkanes
Alternative ParentsNot Available
Substituents
  • Branched alkane
  • Aliphatic acyclic compound
Molecular FrameworkAliphatic acyclic compounds
External Descriptors
Ontology
Physiological effectNot Available
DispositionNot Available
ProcessNot Available
RoleNot Available
Physical Properties
StateNot Available
Experimental Molecular Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water Solubility0.00098 g/lALOGPS
LogP5.74ALOGPS
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
logP5.74ALOGPS
logP4.59ChemAxon
logS-5.2ALOGPS
Physiological Charge0ChemAxon
Hydrogen Acceptor Count0ChemAxon
Hydrogen Donor Count0ChemAxon
Polar Surface Area0 ŲChemAxon
Rotatable Bond Count5ChemAxon
Refractivity47.71 m³·mol⁻¹ChemAxon
Polarizability19.8 ųChemAxon
Number of Rings0ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterNoChemAxon
Veber's RuleYesChemAxon
MDDR-like RuleNoChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DeepCCS[M+H]+144.60930932474
DeepCCS[M-H]-141.73930932474
DeepCCS[M-2H]-178.35930932474
DeepCCS[M+Na]+153.78630932474
AllCCS[M+H]+137.832859911
AllCCS[M+H-H2O]+133.832859911
AllCCS[M+NH4]+141.632859911
AllCCS[M+Na]+142.732859911
AllCCS[M-H]-143.032859911
AllCCS[M+Na-2H]-145.632859911
AllCCS[M+HCOO]-148.532859911

Predicted Kovats Retention Indices

Underivatized

MetaboliteSMILESKovats RI ValueColumn TypeReference
3,5-dimethyloctaneCCCC(C)CC(C)CC900.1Standard polar33892256
3,5-dimethyloctaneCCCC(C)CC(C)CC923.6Standard non polar33892256
3,5-dimethyloctaneCCCC(C)CC(C)CC931.7Semi standard non polar33892256
Spectra

GC-MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted GC-MSPredicted GC-MS Spectrum - 3,5-Dimethyl octane GC-MS (Non-derivatized) - 70eV, Positivesplash10-05i0-9200000000-a7451d82877399d8d8812017-09-20Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - 3,5-Dimethyl octane GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 3,5-dimethyloctane 10V, Positive-QTOFsplash10-0006-1900000000-5f43cfa1d87031687a252017-10-06Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 3,5-dimethyloctane 20V, Positive-QTOFsplash10-006x-9600000000-f7b43e24b0adf68f5f4c2017-10-06Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 3,5-dimethyloctane 40V, Positive-QTOFsplash10-0a4l-9000000000-404e5d3928b961a7a3922017-10-06Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 3,5-dimethyloctane 10V, Negative-QTOFsplash10-0006-0900000000-d0f2deb46da1deb1f6952017-10-06Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 3,5-dimethyloctane 20V, Negative-QTOFsplash10-0006-0900000000-7b223a20bd27f248570c2017-10-06Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 3,5-dimethyloctane 40V, Negative-QTOFsplash10-0adl-9800000000-b75048fb3c685d80da562017-10-06Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 3,5-dimethyloctane 10V, Negative-QTOFsplash10-0006-0900000000-13ee864c22c4eb290bec2021-09-23Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 3,5-dimethyloctane 20V, Negative-QTOFsplash10-0006-0900000000-32bd86a661cc222324562021-09-23Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 3,5-dimethyloctane 40V, Negative-QTOFsplash10-00ke-9500000000-3dec5463d25b0cbcb82f2021-09-23Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 3,5-dimethyloctane 10V, Positive-QTOFsplash10-00dl-9000000000-1c841bb2c25614537f032021-09-25Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 3,5-dimethyloctane 20V, Positive-QTOFsplash10-0596-9000000000-9b87fd121c1f190240ef2021-09-25Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 3,5-dimethyloctane 40V, Positive-QTOFsplash10-052f-9000000000-9d9e9e1992024e10e7b42021-09-25Wishart LabView Spectrum
Biological Properties
Cellular LocationsNot Available
Biospecimen LocationsNot Available
Tissue LocationsNot Available
Pathways
Normal Concentrations
Not Available
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDNot Available
KNApSAcK IDNot Available
Chemspider IDNot Available
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound139989
PDB IDNot Available
ChEBI ID84237
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDNot Available
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General ReferencesNot Available