Record Information |
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Version | 5.0 |
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Status | Expected but not Quantified |
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Creation Date | 2017-03-23 06:13:49 UTC |
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Update Date | 2023-02-21 17:31:09 UTC |
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HMDB ID | HMDB0062773 |
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Secondary Accession Numbers | |
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Metabolite Identification |
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Common Name | 10-hydroxy-(2E,8E)-decadien-4-ynoic Acid |
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Description | 10-hydroxy-(2E,8E)-decadien-4-ynoic acid belongs to the class of organic compounds known as medium-chain fatty acids. These are fatty acids with an aliphatic tail that contains between 4 and 12 carbon atoms. 10-hydroxy-(2E,8E)-decadien-4-ynoic acid is an extremely weak basic (essentially neutral) compound (based on its pKa). |
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Structure | [H]\C(CO)=C(\[H])CCC#C\C([H])=C(/[H])C(O)=O InChI=1S/C10H12O3/c11-9-7-5-3-1-2-4-6-8-10(12)13/h5-8,11H,1,3,9H2,(H,12,13)/b7-5+,8-6+ |
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Synonyms | Value | Source |
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10-Hydroxy-2E,8E-decadien-4-ynoic acid | ChEBI | 10-Hydroxy-2E,8E-decadien-4-ynoate | Generator | 10-Hydroxy-(2E,8E)-decadien-4-ynoate | Generator |
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Chemical Formula | C10H12O3 |
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Average Molecular Weight | 180.203 |
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Monoisotopic Molecular Weight | 180.078644246 |
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IUPAC Name | (2E,8E)-10-hydroxydeca-2,8-dien-4-ynoic acid |
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Traditional Name | (2E,8E)-10-hydroxydeca-2,8-dien-4-ynoic acid |
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CAS Registry Number | Not Available |
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SMILES | [H]\C(CO)=C(\[H])CCC#C\C([H])=C(/[H])C(O)=O |
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InChI Identifier | InChI=1S/C10H12O3/c11-9-7-5-3-1-2-4-6-8-10(12)13/h5-8,11H,1,3,9H2,(H,12,13)/b7-5+,8-6+ |
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InChI Key | YKLIFQPPZZVFPR-KQQUZDAGSA-N |
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Chemical Taxonomy |
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Description | Belongs to the class of organic compounds known as medium-chain fatty acids. These are fatty acids with an aliphatic tail that contains between 4 and 12 carbon atoms. |
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Kingdom | Organic compounds |
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Super Class | Lipids and lipid-like molecules |
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Class | Fatty Acyls |
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Sub Class | Fatty acids and conjugates |
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Direct Parent | Medium-chain fatty acids |
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Alternative Parents | |
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Substituents | - Medium-chain fatty acid
- Hydroxy fatty acid
- Unsaturated fatty acid
- Straight chain fatty acid
- Monocarboxylic acid or derivatives
- Carboxylic acid
- Carboxylic acid derivative
- Organic oxygen compound
- Organic oxide
- Hydrocarbon derivative
- Primary alcohol
- Organooxygen compound
- Carbonyl group
- Alcohol
- Aliphatic acyclic compound
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Molecular Framework | Aliphatic acyclic compounds |
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External Descriptors | |
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Ontology |
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Physiological effect | Not Available |
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Disposition | |
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Process | Not Available |
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Role | Not Available |
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Physical Properties |
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State | Not Available |
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Experimental Molecular Properties | Property | Value | Reference |
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Melting Point | Not Available | Not Available | Boiling Point | Not Available | Not Available | Water Solubility | 0.12 g/l | ALOGPS | LogP | 1.68 | ALOGPS |
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Experimental Chromatographic Properties | Not Available |
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Predicted Molecular Properties | | Show more...
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Predicted Chromatographic Properties | Predicted Collision Cross SectionsPredicted Kovats Retention IndicesUnderivatizedDerivatizedDerivative Name / Structure | SMILES | Kovats RI Value | Column Type | Reference |
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10-hydroxy-(2E,8E)-decadien-4-ynoic Acid,1TMS,isomer #1 | C[Si](C)(C)OC/C=C/CCC#C/C=C/C(=O)O | 1848.9 | Semi standard non polar | 33892256 | 10-hydroxy-(2E,8E)-decadien-4-ynoic Acid,1TMS,isomer #2 | C[Si](C)(C)OC(=O)/C=C/C#CCC/C=C/CO | 1772.7 | Semi standard non polar | 33892256 | 10-hydroxy-(2E,8E)-decadien-4-ynoic Acid,2TMS,isomer #1 | C[Si](C)(C)OC/C=C/CCC#C/C=C/C(=O)O[Si](C)(C)C | 1885.7 | Semi standard non polar | 33892256 | 10-hydroxy-(2E,8E)-decadien-4-ynoic Acid,1TBDMS,isomer #1 | CC(C)(C)[Si](C)(C)OC/C=C/CCC#C/C=C/C(=O)O | 2088.4 | Semi standard non polar | 33892256 | 10-hydroxy-(2E,8E)-decadien-4-ynoic Acid,1TBDMS,isomer #2 | CC(C)(C)[Si](C)(C)OC(=O)/C=C/C#CCC/C=C/CO | 2009.9 | Semi standard non polar | 33892256 | 10-hydroxy-(2E,8E)-decadien-4-ynoic Acid,2TBDMS,isomer #1 | CC(C)(C)[Si](C)(C)OC/C=C/CCC#C/C=C/C(=O)O[Si](C)(C)C(C)(C)C | 2323.6 | Semi standard non polar | 33892256 |
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Spectra |
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| GC-MS SpectraSpectrum Type | Description | Splash Key | Deposition Date | Source | View |
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Predicted GC-MS | Predicted GC-MS Spectrum - 10-hydroxy-(2E,8E)-decadien-4-ynoic Acid GC-MS (Non-derivatized) - 70eV, Positive | splash10-0bt9-7900000000-5b42eee11ec8aeaa9ef4 | 2017-09-20 | Wishart Lab | View Spectrum | Predicted GC-MS | Predicted GC-MS Spectrum - 10-hydroxy-(2E,8E)-decadien-4-ynoic Acid GC-MS (2 TMS) - 70eV, Positive | splash10-05br-9551000000-4bfb476dfbfd74d2c637 | 2017-10-06 | Wishart Lab | View Spectrum | Predicted GC-MS | Predicted GC-MS Spectrum - 10-hydroxy-(2E,8E)-decadien-4-ynoic Acid GC-MS (Non-derivatized) - 70eV, Positive | Not Available | 2021-10-12 | Wishart Lab | View Spectrum |
MS/MS SpectraSpectrum Type | Description | Splash Key | Deposition Date | Source | View |
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Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - 10-hydroxy-(2E,8E)-decadien-4-ynoic Acid 10V, Positive-QTOF | splash10-03di-0900000000-830f427f7cd1aa2749fc | 2017-10-06 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - 10-hydroxy-(2E,8E)-decadien-4-ynoic Acid 20V, Positive-QTOF | splash10-03xs-2900000000-9015ab145b27526cac76 | 2017-10-06 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - 10-hydroxy-(2E,8E)-decadien-4-ynoic Acid 40V, Positive-QTOF | splash10-0fvr-9200000000-8f2a5dc505581493f5fa | 2017-10-06 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - 10-hydroxy-(2E,8E)-decadien-4-ynoic Acid 10V, Negative-QTOF | splash10-004i-0900000000-4b0e4fdebb0b17965bbd | 2017-10-06 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - 10-hydroxy-(2E,8E)-decadien-4-ynoic Acid 20V, Negative-QTOF | splash10-03fr-0900000000-3c176e6e76c30a2a0f59 | 2017-10-06 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - 10-hydroxy-(2E,8E)-decadien-4-ynoic Acid 40V, Negative-QTOF | splash10-0006-9500000000-279a4a7e1ec7db44e50a | 2017-10-06 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - 10-hydroxy-(2E,8E)-decadien-4-ynoic Acid 10V, Negative-QTOF | splash10-004i-0900000000-027b40015fbca4f769fe | 2021-09-22 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - 10-hydroxy-(2E,8E)-decadien-4-ynoic Acid 20V, Negative-QTOF | splash10-0670-2900000000-57e42b8312b8dc4a853b | 2021-09-22 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - 10-hydroxy-(2E,8E)-decadien-4-ynoic Acid 40V, Negative-QTOF | splash10-02vi-9400000000-cf641c61294ea4e06889 | 2021-09-22 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - 10-hydroxy-(2E,8E)-decadien-4-ynoic Acid 10V, Positive-QTOF | splash10-03gr-3900000000-165eedb1aa7357938fdf | 2021-09-22 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - 10-hydroxy-(2E,8E)-decadien-4-ynoic Acid 20V, Positive-QTOF | splash10-004l-9100000000-bb44e8b7dbd898c019f9 | 2021-09-22 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - 10-hydroxy-(2E,8E)-decadien-4-ynoic Acid 40V, Positive-QTOF | splash10-004l-9300000000-0b31bba511058ef3035e | 2021-09-22 | Wishart Lab | View Spectrum |
IR SpectraSpectrum Type | Description | Deposition Date | Source | View |
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Predicted IR Spectrum | IR Ion Spectrum (Predicted IRIS Spectrum, Adduct: [M-H]-) | 2023-02-04 | FELIX lab | View Spectrum | Predicted IR Spectrum | IR Ion Spectrum (Predicted IRIS Spectrum, Adduct: [M+H]+) | 2023-02-04 | FELIX lab | View Spectrum | Predicted IR Spectrum | IR Ion Spectrum (Predicted IRIS Spectrum, Adduct: [M+Na]+) | 2023-02-04 | FELIX lab | View Spectrum |
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Biological Properties |
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Cellular Locations | Not Available |
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Biospecimen Locations | Not Available |
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Tissue Locations | Not Available |
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Pathways | |
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Normal Concentrations |
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| Not Available |
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Abnormal Concentrations |
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| Not Available |
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Associated Disorders and Diseases |
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Disease References | None |
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Associated OMIM IDs | None |
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External Links |
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DrugBank ID | Not Available |
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Phenol Explorer Compound ID | Not Available |
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FooDB ID | Not Available |
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KNApSAcK ID | Not Available |
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Chemspider ID | Not Available |
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KEGG Compound ID | Not Available |
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BioCyc ID | Not Available |
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BiGG ID | Not Available |
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Wikipedia Link | Not Available |
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METLIN ID | Not Available |
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PubChem Compound | 9543616 |
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PDB ID | Not Available |
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ChEBI ID | 72691 |
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Food Biomarker Ontology | Not Available |
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VMH ID | Not Available |
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MarkerDB ID | Not Available |
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Good Scents ID | Not Available |
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References |
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Synthesis Reference | Not Available |
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Material Safety Data Sheet (MSDS) | Not Available |
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General References | - Simons K, Toomre D: Lipid rafts and signal transduction. Nat Rev Mol Cell Biol. 2000 Oct;1(1):31-9. [PubMed:11413487 ]
- Watson AD: Thematic review series: systems biology approaches to metabolic and cardiovascular disorders. Lipidomics: a global approach to lipid analysis in biological systems. J Lipid Res. 2006 Oct;47(10):2101-11. Epub 2006 Aug 10. [PubMed:16902246 ]
- Sethi JK, Vidal-Puig AJ: Thematic review series: adipocyte biology. Adipose tissue function and plasticity orchestrate nutritional adaptation. J Lipid Res. 2007 Jun;48(6):1253-62. Epub 2007 Mar 20. [PubMed:17374880 ]
- Lingwood D, Simons K: Lipid rafts as a membrane-organizing principle. Science. 2010 Jan 1;327(5961):46-50. doi: 10.1126/science.1174621. [PubMed:20044567 ]
- Xiao JF, Varghese RS, Zhou B, Nezami Ranjbar MR, Zhao Y, Tsai TH, Di Poto C, Wang J, Goerlitz D, Luo Y, Cheema AK, Sarhan N, Soliman H, Tadesse MG, Ziada DH, Ressom HW: LC-MS based serum metabolomics for identification of hepatocellular carcinoma biomarkers in Egyptian cohort. J Proteome Res. 2012 Dec 7;11(12):5914-23. doi: 10.1021/pr300673x. Epub 2012 Nov 1. [PubMed:23078175 ]
- Gunstone, Frank D., John L. Harwood, and Albert J. Dijkstra (2007). The lipid handbook with CD-ROM. CRC Press.
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