Hmdb loader
Record Information
Version5.0
StatusDetected but not Quantified
Creation Date2017-09-13 08:54:29 UTC
Update Date2020-11-09 23:30:23 UTC
HMDB IDHMDB0126639
Secondary Accession NumbersNone
Metabolite Identification
Common Name3,5-dihydroxy-4-(sulfooxy)benzoic acid
Description3,5-dihydroxy-4-(sulfooxy)benzoic acid belongs to the class of organic compounds known as gallic acid and derivatives. Gallic acid and derivatives are compounds containing a 3,4,5-trihydroxybenzoic acid moiety. 3,5-dihydroxy-4-(sulfooxy)benzoic acid is a predicted metabolite generated by BioTransformer¹ that is produced by the metabolism of 3,4,5-trihydroxybenzoic acid. 3,5-dihydroxy-4-(sulfooxy)benzoic acid is an extremely weak basic (essentially neutral) compound (based on its pKa). This -4-O-sulfation-of-phenolic-compound occurs in humans. It is generated by Sulfotransferase 1A3 (P0DMM9) and Sulfotransferase enzymes via a -4-O-sulfation-of-phenolic-compound reaction.
Structure
Data?1563875142
Synonyms
ValueSource
3,5-Dihydroxy-4-(sulfooxy)benzoateGenerator
3,5-Dihydroxy-4-(sulphooxy)benzoateGenerator
3,5-Dihydroxy-4-(sulphooxy)benzoic acidGenerator
Chemical FormulaC7H6O8S
Average Molecular Weight250.18
Monoisotopic Molecular Weight249.978338327
IUPAC Name3,5-dihydroxy-4-(sulfooxy)benzoic acid
Traditional Name3,5-dihydroxy-4-(sulfooxy)benzoic acid
CAS Registry NumberNot Available
SMILES
OC(=O)C1=CC(O)=C(OS(O)(=O)=O)C(O)=C1
InChI Identifier
InChI=1S/C7H6O8S/c8-4-1-3(7(10)11)2-5(9)6(4)15-16(12,13)14/h1-2,8-9H,(H,10,11)(H,12,13,14)
InChI KeyDMNOQQUULVKPTE-UHFFFAOYSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as gallic acid and derivatives. Gallic acid and derivatives are compounds containing a 3,4,5-trihydroxybenzoic acid moiety.
KingdomOrganic compounds
Super ClassBenzenoids
ClassBenzene and substituted derivatives
Sub ClassBenzoic acids and derivatives
Direct ParentGallic acid and derivatives
Alternative Parents
Substituents
  • Gallic acid or derivatives
  • Phenylsulfate
  • Arylsulfate
  • Benzoic acid
  • Benzoyl
  • Phenoxy compound
  • Resorcinol
  • 1-hydroxy-2-unsubstituted benzenoid
  • Phenol
  • 1-hydroxy-4-unsubstituted benzenoid
  • Sulfuric acid ester
  • Sulfate-ester
  • Sulfuric acid monoester
  • Organic sulfuric acid or derivatives
  • Carboxylic acid
  • Carboxylic acid derivative
  • Organooxygen compound
  • Hydrocarbon derivative
  • Organic oxygen compound
  • Organic oxide
  • Aromatic homomonocyclic compound
Molecular FrameworkAromatic homomonocyclic compounds
External DescriptorsNot Available
Ontology
Physiological effectNot Available
Disposition
ProcessNot Available
RoleNot Available
Physical Properties
StateNot Available
Experimental Molecular Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
logP-0.5ALOGPS
logP1.54ChemAxon
logS-1.8ALOGPS
pKa (Strongest Acidic)-2.8ChemAxon
pKa (Strongest Basic)-4.2ChemAxon
Physiological Charge-2ChemAxon
Hydrogen Acceptor Count7ChemAxon
Hydrogen Donor Count4ChemAxon
Polar Surface Area141.36 ŲChemAxon
Rotatable Bond Count3ChemAxon
Refractivity49.25 m³·mol⁻¹ChemAxon
Polarizability19.86 ųChemAxon
Number of Rings1ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterYesChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DarkChem[M+H]+154.87531661259
DarkChem[M-H]-151.99131661259
DeepCCS[M+H]+156.59730932474
DeepCCS[M-H]-154.21330932474
DeepCCS[M-2H]-187.37130932474
DeepCCS[M+Na]+162.66430932474
AllCCS[M+H]+152.132859911
AllCCS[M+H-H2O]+148.432859911
AllCCS[M+NH4]+155.632859911
AllCCS[M+Na]+156.632859911
AllCCS[M-H]-143.232859911
AllCCS[M+Na-2H]-143.532859911
AllCCS[M+HCOO]-143.832859911

Predicted Kovats Retention Indices

Underivatized

MetaboliteSMILESKovats RI ValueColumn TypeReference
3,5-dihydroxy-4-(sulfooxy)benzoic acidOC(=O)C1=CC(O)=C(OS(O)(=O)=O)C(O)=C14229.9Standard polar33892256
3,5-dihydroxy-4-(sulfooxy)benzoic acidOC(=O)C1=CC(O)=C(OS(O)(=O)=O)C(O)=C11828.2Standard non polar33892256
3,5-dihydroxy-4-(sulfooxy)benzoic acidOC(=O)C1=CC(O)=C(OS(O)(=O)=O)C(O)=C12089.1Semi standard non polar33892256

Derivatized

Derivative Name / StructureSMILESKovats RI ValueColumn TypeReference
3,5-dihydroxy-4-(sulfooxy)benzoic acid,1TMS,isomer #1C[Si](C)(C)OC(=O)C1=CC(O)=C(OS(=O)(=O)O)C(O)=C12241.1Semi standard non polar33892256
3,5-dihydroxy-4-(sulfooxy)benzoic acid,1TMS,isomer #2C[Si](C)(C)OC1=CC(C(=O)O)=CC(O)=C1OS(=O)(=O)O2244.9Semi standard non polar33892256
3,5-dihydroxy-4-(sulfooxy)benzoic acid,1TMS,isomer #3C[Si](C)(C)OS(=O)(=O)OC1=C(O)C=C(C(=O)O)C=C1O2324.3Semi standard non polar33892256
3,5-dihydroxy-4-(sulfooxy)benzoic acid,2TMS,isomer #1C[Si](C)(C)OC(=O)C1=CC(O)=C(OS(=O)(=O)O)C(O[Si](C)(C)C)=C12229.4Semi standard non polar33892256
3,5-dihydroxy-4-(sulfooxy)benzoic acid,2TMS,isomer #2C[Si](C)(C)OC(=O)C1=CC(O)=C(OS(=O)(=O)O[Si](C)(C)C)C(O)=C12273.7Semi standard non polar33892256
3,5-dihydroxy-4-(sulfooxy)benzoic acid,2TMS,isomer #3C[Si](C)(C)OC1=CC(C(=O)O)=CC(O[Si](C)(C)C)=C1OS(=O)(=O)O2252.6Semi standard non polar33892256
3,5-dihydroxy-4-(sulfooxy)benzoic acid,2TMS,isomer #4C[Si](C)(C)OC1=CC(C(=O)O)=CC(O)=C1OS(=O)(=O)O[Si](C)(C)C2275.0Semi standard non polar33892256
3,5-dihydroxy-4-(sulfooxy)benzoic acid,3TMS,isomer #1C[Si](C)(C)OC(=O)C1=CC(O[Si](C)(C)C)=C(OS(=O)(=O)O)C(O[Si](C)(C)C)=C12254.4Semi standard non polar33892256
3,5-dihydroxy-4-(sulfooxy)benzoic acid,3TMS,isomer #2C[Si](C)(C)OC(=O)C1=CC(O)=C(OS(=O)(=O)O[Si](C)(C)C)C(O[Si](C)(C)C)=C12275.6Semi standard non polar33892256
3,5-dihydroxy-4-(sulfooxy)benzoic acid,3TMS,isomer #3C[Si](C)(C)OC1=CC(C(=O)O)=CC(O[Si](C)(C)C)=C1OS(=O)(=O)O[Si](C)(C)C2292.9Semi standard non polar33892256
3,5-dihydroxy-4-(sulfooxy)benzoic acid,4TMS,isomer #1C[Si](C)(C)OC(=O)C1=CC(O[Si](C)(C)C)=C(OS(=O)(=O)O[Si](C)(C)C)C(O[Si](C)(C)C)=C12334.6Semi standard non polar33892256
3,5-dihydroxy-4-(sulfooxy)benzoic acid,4TMS,isomer #1C[Si](C)(C)OC(=O)C1=CC(O[Si](C)(C)C)=C(OS(=O)(=O)O[Si](C)(C)C)C(O[Si](C)(C)C)=C12627.7Standard non polar33892256
3,5-dihydroxy-4-(sulfooxy)benzoic acid,4TMS,isomer #1C[Si](C)(C)OC(=O)C1=CC(O[Si](C)(C)C)=C(OS(=O)(=O)O[Si](C)(C)C)C(O[Si](C)(C)C)=C12725.0Standard polar33892256
3,5-dihydroxy-4-(sulfooxy)benzoic acid,1TBDMS,isomer #1CC(C)(C)[Si](C)(C)OC(=O)C1=CC(O)=C(OS(=O)(=O)O)C(O)=C12545.4Semi standard non polar33892256
3,5-dihydroxy-4-(sulfooxy)benzoic acid,1TBDMS,isomer #2CC(C)(C)[Si](C)(C)OC1=CC(C(=O)O)=CC(O)=C1OS(=O)(=O)O2538.0Semi standard non polar33892256
3,5-dihydroxy-4-(sulfooxy)benzoic acid,1TBDMS,isomer #3CC(C)(C)[Si](C)(C)OS(=O)(=O)OC1=C(O)C=C(C(=O)O)C=C1O2577.6Semi standard non polar33892256
3,5-dihydroxy-4-(sulfooxy)benzoic acid,2TBDMS,isomer #1CC(C)(C)[Si](C)(C)OC(=O)C1=CC(O)=C(OS(=O)(=O)O)C(O[Si](C)(C)C(C)(C)C)=C12762.6Semi standard non polar33892256
3,5-dihydroxy-4-(sulfooxy)benzoic acid,2TBDMS,isomer #2CC(C)(C)[Si](C)(C)OC(=O)C1=CC(O)=C(OS(=O)(=O)O[Si](C)(C)C(C)(C)C)C(O)=C12798.3Semi standard non polar33892256
3,5-dihydroxy-4-(sulfooxy)benzoic acid,2TBDMS,isomer #3CC(C)(C)[Si](C)(C)OC1=CC(C(=O)O)=CC(O[Si](C)(C)C(C)(C)C)=C1OS(=O)(=O)O2752.9Semi standard non polar33892256
3,5-dihydroxy-4-(sulfooxy)benzoic acid,2TBDMS,isomer #4CC(C)(C)[Si](C)(C)OC1=CC(C(=O)O)=CC(O)=C1OS(=O)(=O)O[Si](C)(C)C(C)(C)C2782.1Semi standard non polar33892256
3,5-dihydroxy-4-(sulfooxy)benzoic acid,3TBDMS,isomer #1CC(C)(C)[Si](C)(C)OC(=O)C1=CC(O[Si](C)(C)C(C)(C)C)=C(OS(=O)(=O)O)C(O[Si](C)(C)C(C)(C)C)=C13001.5Semi standard non polar33892256
3,5-dihydroxy-4-(sulfooxy)benzoic acid,3TBDMS,isomer #2CC(C)(C)[Si](C)(C)OC(=O)C1=CC(O)=C(OS(=O)(=O)O[Si](C)(C)C(C)(C)C)C(O[Si](C)(C)C(C)(C)C)=C12981.7Semi standard non polar33892256
3,5-dihydroxy-4-(sulfooxy)benzoic acid,3TBDMS,isomer #3CC(C)(C)[Si](C)(C)OC1=CC(C(=O)O)=CC(O[Si](C)(C)C(C)(C)C)=C1OS(=O)(=O)O[Si](C)(C)C(C)(C)C3004.7Semi standard non polar33892256
3,5-dihydroxy-4-(sulfooxy)benzoic acid,4TBDMS,isomer #1CC(C)(C)[Si](C)(C)OC(=O)C1=CC(O[Si](C)(C)C(C)(C)C)=C(OS(=O)(=O)O[Si](C)(C)C(C)(C)C)C(O[Si](C)(C)C(C)(C)C)=C13201.2Semi standard non polar33892256
3,5-dihydroxy-4-(sulfooxy)benzoic acid,4TBDMS,isomer #1CC(C)(C)[Si](C)(C)OC(=O)C1=CC(O[Si](C)(C)C(C)(C)C)=C(OS(=O)(=O)O[Si](C)(C)C(C)(C)C)C(O[Si](C)(C)C(C)(C)C)=C13691.3Standard non polar33892256
3,5-dihydroxy-4-(sulfooxy)benzoic acid,4TBDMS,isomer #1CC(C)(C)[Si](C)(C)OC(=O)C1=CC(O[Si](C)(C)C(C)(C)C)=C(OS(=O)(=O)O[Si](C)(C)C(C)(C)C)C(O[Si](C)(C)C(C)(C)C)=C13044.2Standard polar33892256
Spectra

GC-MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted GC-MSPredicted GC-MS Spectrum - 3,5-dihydroxy-4-(sulfooxy)benzoic acid GC-MS (3 TMS) - 70eV, Positivesplash10-00fr-5009200000-41ca014a48e5c78857b82017-10-06Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - 3,5-dihydroxy-4-(sulfooxy)benzoic acid GC-MS (Non-derivatized) - 70eV, Positivesplash10-0fza-2690000000-4f2e126f03831e9424442017-11-06Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - 3,5-dihydroxy-4-(sulfooxy)benzoic acid GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 3,5-dihydroxy-4-(sulfooxy)benzoic acid 10V, Positive-QTOFsplash10-0ue9-0090000000-396db000764087cdb06c2019-02-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 3,5-dihydroxy-4-(sulfooxy)benzoic acid 20V, Positive-QTOFsplash10-0ue9-0790000000-a194f8254fd126cee7ff2019-02-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 3,5-dihydroxy-4-(sulfooxy)benzoic acid 40V, Positive-QTOFsplash10-00kb-9410000000-7333199fd1ebbd40b1a82019-02-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 3,5-dihydroxy-4-(sulfooxy)benzoic acid 10V, Negative-QTOFsplash10-0002-0090000000-d28744219b1ef1803f062019-02-23Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 3,5-dihydroxy-4-(sulfooxy)benzoic acid 20V, Negative-QTOFsplash10-0v6s-0950000000-b2c17741300ae884874b2019-02-23Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 3,5-dihydroxy-4-(sulfooxy)benzoic acid 40V, Negative-QTOFsplash10-00c0-2900000000-08c9e3f8d9f8d39a53952019-02-23Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 3,5-dihydroxy-4-(sulfooxy)benzoic acid 10V, Positive-QTOFsplash10-0udi-0190000000-cdada870e9fc59904acc2021-09-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 3,5-dihydroxy-4-(sulfooxy)benzoic acid 20V, Positive-QTOFsplash10-0gb9-0900000000-66068afc8aa22b49b9862021-09-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 3,5-dihydroxy-4-(sulfooxy)benzoic acid 40V, Positive-QTOFsplash10-0fb9-1900000000-ccfcb239f74c687edaf82021-09-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 3,5-dihydroxy-4-(sulfooxy)benzoic acid 10V, Negative-QTOFsplash10-0002-0090000000-f302efb15f2254b289492021-09-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 3,5-dihydroxy-4-(sulfooxy)benzoic acid 20V, Negative-QTOFsplash10-0002-0290000000-dff4f3382b96ced26bf42021-09-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 3,5-dihydroxy-4-(sulfooxy)benzoic acid 40V, Negative-QTOFsplash10-0uyr-9400000000-bfc233e802e563457d262021-09-24Wishart LabView Spectrum

NMR Spectra

Spectrum TypeDescriptionDeposition DateSourceView
Predicted 1D NMR1H NMR Spectrum (1D, 100 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 100 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 1000 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 1000 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 200 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 200 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 300 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 300 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 400 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 400 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 500 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 500 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 600 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 600 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 700 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 700 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 800 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 800 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 900 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 900 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Biological Properties
Cellular LocationsNot Available
Biospecimen Locations
  • Blood
  • Urine
Tissue LocationsNot Available
Pathways
Normal Concentrations
BiospecimenStatusValueAgeSexConditionReferenceDetails
BloodDetected but not QuantifiedNot QuantifiedAdult (>18 years old)BothNormal details
UrineDetected but not QuantifiedNot QuantifiedAdult (>18 years old)BothNormal details
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDNot Available
KNApSAcK IDNot Available
Chemspider IDNot Available
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound69378631
PDB IDNot Available
ChEBI IDNot Available
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDNot Available
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General References
  1. Djoumbou Feunang, Yannick (2017). Cheminformatics Tools for Enabling Metabolomics, 2017 (PhD thesis). University of Alberta.