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Record Information
Version5.0
StatusDetected but not Quantified
Creation Date2006-05-22 14:17:40 UTC
Update Date2022-03-07 02:49:13 UTC
HMDB IDHMDB0002193
Secondary Accession Numbers
  • HMDB02193
Metabolite Identification
Common NameE,e-Carotene-3,3'-dione
DescriptionCarotene-3,3'-dione is a carotenoid found in human fluids. Carotenoids are isoprenoid molecules that are widespread in nature and are typically seen as pigments in fruits, flowers, birds and crustacea. Animals are unable to synthesise carotenoids de novo, and rely upon the diet as a source of these compounds. Over recent years there has been considerable interest in dietary carotenoids with respect to their potential in alleviating age-related diseases in humans. This attention has been mirrored by significant advances in cloning most of the carotenoid genes and in the genetic manipulation of crop plants with the intention of increasing levels in the diet. Studies have shown an inverse relationship between the consumption of certain fruits and vegetables and the risk of epithelial cancer. Since carotenoids are among the micronutrients found in cancer preventive foods, detailed qualitative and quantitative determination of these compounds, particularly in fruits and vegetables and in human plasma, have recently become increasingly important. (PMID: 1416048 , 15003396 ).
Structure
Data?1582752234
SynonymsNot Available
Chemical FormulaC40H52O2
Average Molecular Weight564.8397
Monoisotopic Molecular Weight564.396730908
IUPAC Name3,5,5-trimethyl-4-[(1E,3E,5E,7E,9E,11E,13E,15E,17E)-3,7,12,16-tetramethyl-18-(2,6,6-trimethyl-4-oxocyclohex-2-en-1-yl)octadeca-1,3,5,7,9,11,13,15,17-nonaen-1-yl]cyclohex-2-en-1-one
Traditional Namee,e-carotene-3,3'-dione
CAS Registry Number28840-14-4
SMILES
C\C(\C=C\C=C(/C)\C=C\C1C(C)=CC(=O)CC1(C)C)=C/C=C/C=C(\C)/C=C/C=C(\C)/C=C/C1C(C)=CC(=O)CC1(C)C
InChI Identifier
InChI=1S/C40H52O2/c1-29(17-13-19-31(3)21-23-37-33(5)25-35(41)27-39(37,7)8)15-11-12-16-30(2)18-14-20-32(4)22-24-38-34(6)26-36(42)28-40(38,9)10/h11-26,37-38H,27-28H2,1-10H3/b12-11+,17-13+,18-14+,23-21+,24-22+,29-15+,30-16+,31-19+,32-20+
InChI KeyIMFOMPZKWQBDLQ-DKLMTRRASA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as xanthophylls. These are carotenoids containing an oxygenated carotene backbone. Carotenes are characterized by the presence of two end-groups (mostly cyclohexene rings, but also cyclopentene rings or acyclic groups) linked by a long branched alkyl chain. Carotenes belonging form a subgroup of the carotenoids family. Xanthophylls arise by oxygenation of the carotene backbone.
KingdomOrganic compounds
Super ClassLipids and lipid-like molecules
ClassPrenol lipids
Sub ClassTetraterpenoids
Direct ParentXanthophylls
Alternative Parents
Substituents
  • Xanthophyll
  • Cyclohexenone
  • Cyclic ketone
  • Ketone
  • Organic oxygen compound
  • Organic oxide
  • Hydrocarbon derivative
  • Organooxygen compound
  • Carbonyl group
  • Aliphatic homomonocyclic compound
Molecular FrameworkAliphatic homomonocyclic compounds
External DescriptorsNot Available
Ontology
Physiological effectNot Available
Disposition
ProcessNot Available
RoleNot Available
Physical Properties
StateSolid
Experimental Molecular Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
Water Solubility0.0005 g/LALOGPS
logP8.49ALOGPS
logP9.57ChemAxon
logS-6ALOGPS
pKa (Strongest Basic)-4.5ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count2ChemAxon
Hydrogen Donor Count0ChemAxon
Polar Surface Area34.14 ŲChemAxon
Rotatable Bond Count10ChemAxon
Refractivity193.38 m³·mol⁻¹ChemAxon
Polarizability71.63 ųChemAxon
Number of Rings2ChemAxon
BioavailabilityNoChemAxon
Rule of FiveNoChemAxon
Ghose FilterNoChemAxon
Veber's RuleYesChemAxon
MDDR-like RuleNoChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DarkChem[M+H]+249.12931661259
DarkChem[M-H]-247.13231661259
DeepCCS[M+H]+257.22430932474
DeepCCS[M-H]-255.39930932474
DeepCCS[M-2H]-288.64230932474
DeepCCS[M+Na]+262.8330932474
AllCCS[M+H]+254.932859911
AllCCS[M+H-H2O]+253.132859911
AllCCS[M+NH4]+256.632859911
AllCCS[M+Na]+257.132859911
AllCCS[M-H]-224.332859911
AllCCS[M+Na-2H]-227.532859911
AllCCS[M+HCOO]-231.132859911

Predicted Kovats Retention Indices

Underivatized

MetaboliteSMILESKovats RI ValueColumn TypeReference
E,e-Carotene-3,3'-dioneC\C(\C=C\C=C(/C)\C=C\C1C(C)=CC(=O)CC1(C)C)=C/C=C/C=C(\C)/C=C/C=C(\C)/C=C/C1C(C)=CC(=O)CC1(C)C6114.6Standard polar33892256
E,e-Carotene-3,3'-dioneC\C(\C=C\C=C(/C)\C=C\C1C(C)=CC(=O)CC1(C)C)=C/C=C/C=C(\C)/C=C/C=C(\C)/C=C/C1C(C)=CC(=O)CC1(C)C4562.3Standard non polar33892256
E,e-Carotene-3,3'-dioneC\C(\C=C\C=C(/C)\C=C\C1C(C)=CC(=O)CC1(C)C)=C/C=C/C=C(\C)/C=C/C=C(\C)/C=C/C1C(C)=CC(=O)CC1(C)C4650.0Semi standard non polar33892256

Derivatized

Derivative Name / StructureSMILESKovats RI ValueColumn TypeReference
E,e-Carotene-3,3'-dione,1TMS,isomer #1CC1=CC(O[Si](C)(C)C)=CC(C)(C)C1/C=C/C(C)=C/C=C/C(C)=C/C=C/C=C(C)/C=C/C=C(C)/C=C/C1C(C)=CC(=O)CC1(C)C4830.2Semi standard non polar33892256
E,e-Carotene-3,3'-dione,1TMS,isomer #1CC1=CC(O[Si](C)(C)C)=CC(C)(C)C1/C=C/C(C)=C/C=C/C(C)=C/C=C/C=C(C)/C=C/C=C(C)/C=C/C1C(C)=CC(=O)CC1(C)C4431.6Standard non polar33892256
E,e-Carotene-3,3'-dione,1TMS,isomer #1CC1=CC(O[Si](C)(C)C)=CC(C)(C)C1/C=C/C(C)=C/C=C/C(C)=C/C=C/C=C(C)/C=C/C=C(C)/C=C/C1C(C)=CC(=O)CC1(C)C4645.6Standard polar33892256
E,e-Carotene-3,3'-dione,2TMS,isomer #1CC1=CC(O[Si](C)(C)C)=CC(C)(C)C1/C=C/C(C)=C/C=C/C(C)=C/C=C/C=C(C)/C=C/C=C(C)/C=C/C1C(C)=CC(O[Si](C)(C)C)=CC1(C)C4686.9Semi standard non polar33892256
E,e-Carotene-3,3'-dione,2TMS,isomer #1CC1=CC(O[Si](C)(C)C)=CC(C)(C)C1/C=C/C(C)=C/C=C/C(C)=C/C=C/C=C(C)/C=C/C=C(C)/C=C/C1C(C)=CC(O[Si](C)(C)C)=CC1(C)C4447.5Standard non polar33892256
E,e-Carotene-3,3'-dione,2TMS,isomer #1CC1=CC(O[Si](C)(C)C)=CC(C)(C)C1/C=C/C(C)=C/C=C/C(C)=C/C=C/C=C(C)/C=C/C=C(C)/C=C/C1C(C)=CC(O[Si](C)(C)C)=CC1(C)C4683.0Standard polar33892256
E,e-Carotene-3,3'-dione,1TBDMS,isomer #1CC1=CC(O[Si](C)(C)C(C)(C)C)=CC(C)(C)C1/C=C/C(C)=C/C=C/C(C)=C/C=C/C=C(C)/C=C/C=C(C)/C=C/C1C(C)=CC(=O)CC1(C)C5029.9Semi standard non polar33892256
E,e-Carotene-3,3'-dione,1TBDMS,isomer #1CC1=CC(O[Si](C)(C)C(C)(C)C)=CC(C)(C)C1/C=C/C(C)=C/C=C/C(C)=C/C=C/C=C(C)/C=C/C=C(C)/C=C/C1C(C)=CC(=O)CC1(C)C4631.7Standard non polar33892256
E,e-Carotene-3,3'-dione,1TBDMS,isomer #1CC1=CC(O[Si](C)(C)C(C)(C)C)=CC(C)(C)C1/C=C/C(C)=C/C=C/C(C)=C/C=C/C=C(C)/C=C/C=C(C)/C=C/C1C(C)=CC(=O)CC1(C)C4713.2Standard polar33892256
E,e-Carotene-3,3'-dione,2TBDMS,isomer #1CC1=CC(O[Si](C)(C)C(C)(C)C)=CC(C)(C)C1/C=C/C(C)=C/C=C/C(C)=C/C=C/C=C(C)/C=C/C=C(C)/C=C/C1C(C)=CC(O[Si](C)(C)C(C)(C)C)=CC1(C)C5101.7Semi standard non polar33892256
E,e-Carotene-3,3'-dione,2TBDMS,isomer #1CC1=CC(O[Si](C)(C)C(C)(C)C)=CC(C)(C)C1/C=C/C(C)=C/C=C/C(C)=C/C=C/C=C(C)/C=C/C=C(C)/C=C/C1C(C)=CC(O[Si](C)(C)C(C)(C)C)=CC1(C)C4839.5Standard non polar33892256
E,e-Carotene-3,3'-dione,2TBDMS,isomer #1CC1=CC(O[Si](C)(C)C(C)(C)C)=CC(C)(C)C1/C=C/C(C)=C/C=C/C(C)=C/C=C/C=C(C)/C=C/C=C(C)/C=C/C1C(C)=CC(O[Si](C)(C)C(C)(C)C)=CC1(C)C4786.4Standard polar33892256
Spectra

GC-MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted GC-MSPredicted GC-MS Spectrum - E,e-Carotene-3,3'-dione GC-MS (Non-derivatized) - 70eV, Positivesplash10-0002-9313370000-589e472f03c0920eb5032017-09-01Wishart LabView Spectrum

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - E,e-Carotene-3,3'-dione 10V, Positive-QTOFsplash10-014i-0222390000-6ae994395029f382f3982017-09-01Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - E,e-Carotene-3,3'-dione 20V, Positive-QTOFsplash10-03dj-0586930000-2a209a7e354b1a6d24ca2017-09-01Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - E,e-Carotene-3,3'-dione 40V, Positive-QTOFsplash10-0002-1376910000-fade15ac03834455d1dd2017-09-01Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - E,e-Carotene-3,3'-dione 10V, Negative-QTOFsplash10-03di-0000090000-1319b532b991390aac3e2017-09-01Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - E,e-Carotene-3,3'-dione 20V, Negative-QTOFsplash10-03di-0000090000-3f76a4a1a487715d7f822017-09-01Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - E,e-Carotene-3,3'-dione 40V, Negative-QTOFsplash10-0002-0222590000-a4c220a5309e1cb6372b2017-09-01Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - E,e-Carotene-3,3'-dione 10V, Positive-QTOFsplash10-00ns-0252920000-538d069861271a55bd352021-09-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - E,e-Carotene-3,3'-dione 20V, Positive-QTOFsplash10-000m-0033910000-a9c946dca619c90defcc2021-09-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - E,e-Carotene-3,3'-dione 40V, Positive-QTOFsplash10-01p2-0169300000-3ef4b11663ead67d30792021-09-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - E,e-Carotene-3,3'-dione 10V, Negative-QTOFsplash10-03di-0002090000-d636f866de4f9d9a2f3f2021-09-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - E,e-Carotene-3,3'-dione 20V, Negative-QTOFsplash10-03dr-0728390000-4f87f0f3cc43c53e99e62021-09-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - E,e-Carotene-3,3'-dione 40V, Negative-QTOFsplash10-006t-0529100000-e303b2ad8a2994f6fdd52021-09-24Wishart LabView Spectrum
Biological Properties
Cellular Locations
  • Extracellular
  • Membrane
Biospecimen Locations
  • Blood
  • Breast Milk
Tissue LocationsNot Available
Pathways
Normal Concentrations
BiospecimenStatusValueAgeSexConditionReferenceDetails
BloodDetected but not QuantifiedNot QuantifiedAdult (>18 years old)FemaleNormal details
Breast MilkDetected but not QuantifiedNot QuantifiedAdult (>18 years old)FemaleNormal details
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDFDB112205
KNApSAcK IDNot Available
Chemspider ID4581802
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound5471691
PDB IDNot Available
ChEBI ID145971
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDNot Available
References
Synthesis ReferenceSliwka, Hans-Richard; Liaaen-Jensen, Synnove. Selenium carotenoids. 2 Synthesis of e,e-carotene-3,3'-dione from rhodoxanthin. Acta Chemica Scandinavica (1995), 49(11), 856-7.
Material Safety Data Sheet (MSDS)Not Available
General References
  1. Khachik F, Beecher GR, Goli MB, Lusby WR, Smith JC Jr: Separation and identification of carotenoids and their oxidation products in the extracts of human plasma. Anal Chem. 1992 Sep 15;64(18):2111-22. [PubMed:1416048 ]
  2. Fraser PD, Bramley PM: The biosynthesis and nutritional uses of carotenoids. Prog Lipid Res. 2004 May;43(3):228-65. [PubMed:15003396 ]