Hmdb loader
Record Information
Version5.0
StatusDetected but not Quantified
Creation Date2019-10-11 17:01:56 UTC
Update Date2022-03-07 03:18:19 UTC
HMDB IDHMDB0240564
Secondary Accession NumbersNone
Metabolite Identification
Common NameUmbelliferone glucuronide
DescriptionUmbelliferone glucuronide, also known as 7-hydroxycoumarin glucuronide, belongs to the class of organic compounds known as coumarin glycosides. These are aromatic compounds containing a carbohydrate moiety glycosidically bound to a coumarin moiety. Based on a literature review very few articles have been published on Umbelliferone glucuronide.
Structure
Thumb
Synonyms
ValueSource
2-oxo-2H-1-Benzopyran-7-yl beta-D-glucopyranosiduronic acidChEBI
7-Hydroxycoumarin glucuronideChEBI
7-Hydroxycoumarin O-glucuronideChEBI
2-oxo-2H-1-Benzopyran-7-yl b-D-glucopyranosiduronateGenerator
2-oxo-2H-1-Benzopyran-7-yl b-D-glucopyranosiduronic acidGenerator
2-oxo-2H-1-Benzopyran-7-yl beta-D-glucopyranosiduronateGenerator
2-oxo-2H-1-Benzopyran-7-yl β-D-glucopyranosiduronateGenerator
2-oxo-2H-1-Benzopyran-7-yl β-D-glucopyranosiduronic acidGenerator
7-Hydroxycoumarin O(7)-glucosiduronateHMDB
Chemical FormulaC15H14O9
Average Molecular Weight338.268
Monoisotopic Molecular Weight338.063782031
IUPAC Name(2S,3S,4S,5R,6S)-3,4,5-trihydroxy-6-[(2-oxo-2H-chromen-7-yl)oxy]oxane-2-carboxylic acid
Traditional Name7-hydroxycoumarin glucuronide
CAS Registry NumberNot Available
SMILES
[H][C@@]1(OC2=CC3=C(C=CC(=O)O3)C=C2)O[C@]([H])(C(O)=O)[C@@]([H])(O)[C@]([H])(O)[C@@]1([H])O
InChI Identifier
InChI=1S/C15H14O9/c16-9-4-2-6-1-3-7(5-8(6)23-9)22-15-12(19)10(17)11(18)13(24-15)14(20)21/h1-5,10-13,15,17-19H,(H,20,21)/t10-,11-,12+,13-,15+/m0/s1
InChI KeyPRYLPCLGPXGILY-DKBOKBLXSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as coumarin glycosides. These are aromatic compounds containing a carbohydrate moiety glycosidically bound to a coumarin moiety.
KingdomOrganic compounds
Super ClassPhenylpropanoids and polyketides
ClassCoumarins and derivatives
Sub ClassCoumarin glycosides
Direct ParentCoumarin glycosides
Alternative Parents
Substituents
  • Coumarin-7-o-glycoside
  • Coumarin o-glycoside
  • Phenolic glycoside
  • 1-o-glucuronide
  • O-glucuronide
  • Glucuronic acid or derivatives
  • O-glycosyl compound
  • Glycosyl compound
  • Benzopyran
  • 1-benzopyran
  • Pyranone
  • Beta-hydroxy acid
  • Benzenoid
  • Pyran
  • Oxane
  • Hydroxy acid
  • Monosaccharide
  • Heteroaromatic compound
  • Secondary alcohol
  • Lactone
  • Oxacycle
  • Organoheterocyclic compound
  • Polyol
  • Carboxylic acid derivative
  • Carboxylic acid
  • Acetal
  • Monocarboxylic acid or derivatives
  • Organic oxygen compound
  • Organic oxide
  • Organooxygen compound
  • Alcohol
  • Carbonyl group
  • Hydrocarbon derivative
  • Aromatic heteropolycyclic compound
Molecular FrameworkAromatic heteropolycyclic compounds
External Descriptors
Ontology
Not AvailableNot Available
Physical Properties
StateNot Available
Experimental Molecular Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
logP-0.5ALOGPS
logP-0.47ChemAxon
logS-1.5ALOGPS
pKa (Strongest Acidic)2.98ChemAxon
pKa (Strongest Basic)-3.7ChemAxon
Physiological Charge-1ChemAxon
Hydrogen Acceptor Count8ChemAxon
Hydrogen Donor Count4ChemAxon
Polar Surface Area142.75 ŲChemAxon
Rotatable Bond Count3ChemAxon
Refractivity75.54 m³·mol⁻¹ChemAxon
Polarizability30.88 ųChemAxon
Number of Rings3ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DeepCCS[M+H]+165.730932474
DeepCCS[M-H]-163.23130932474
DeepCCS[M-2H]-197.49130932474
DeepCCS[M+Na]+172.87830932474
AllCCS[M+H]+176.232859911
AllCCS[M+H-H2O]+173.132859911
AllCCS[M+NH4]+179.132859911
AllCCS[M+Na]+179.932859911
AllCCS[M-H]-172.932859911
AllCCS[M+Na-2H]-172.532859911
AllCCS[M+HCOO]-172.132859911

Predicted Kovats Retention Indices

Underivatized

MetaboliteSMILESKovats RI ValueColumn TypeReference
Umbelliferone glucuronide[H][C@@]1(OC2=CC3=C(C=CC(=O)O3)C=C2)O[C@]([H])(C(O)=O)[C@@]([H])(O)[C@]([H])(O)[C@@]1([H])O4264.5Standard polar33892256
Umbelliferone glucuronide[H][C@@]1(OC2=CC3=C(C=CC(=O)O3)C=C2)O[C@]([H])(C(O)=O)[C@@]([H])(O)[C@]([H])(O)[C@@]1([H])O2833.6Standard non polar33892256
Umbelliferone glucuronide[H][C@@]1(OC2=CC3=C(C=CC(=O)O3)C=C2)O[C@]([H])(C(O)=O)[C@@]([H])(O)[C@]([H])(O)[C@@]1([H])O3284.2Semi standard non polar33892256

Derivatized

Derivative Name / StructureSMILESKovats RI ValueColumn TypeReference
Umbelliferone glucuronide,1TMS,isomer #1C[Si](C)(C)OC(=O)[C@H]1O[C@@H](OC2=CC=C3C=CC(=O)OC3=C2)[C@H](O)[C@@H](O)[C@@H]1O3062.7Semi standard non polar33892256
Umbelliferone glucuronide,1TMS,isomer #2C[Si](C)(C)O[C@@H]1[C@@H](C(=O)O)O[C@@H](OC2=CC=C3C=CC(=O)OC3=C2)[C@H](O)[C@H]1O3053.6Semi standard non polar33892256
Umbelliferone glucuronide,1TMS,isomer #3C[Si](C)(C)O[C@@H]1[C@@H](O)[C@H](OC2=CC=C3C=CC(=O)OC3=C2)O[C@H](C(=O)O)[C@H]1O3056.8Semi standard non polar33892256
Umbelliferone glucuronide,1TMS,isomer #4C[Si](C)(C)O[C@H]1[C@H](OC2=CC=C3C=CC(=O)OC3=C2)O[C@H](C(=O)O)[C@@H](O)[C@@H]1O3071.1Semi standard non polar33892256
Umbelliferone glucuronide,2TMS,isomer #1C[Si](C)(C)OC(=O)[C@H]1O[C@@H](OC2=CC=C3C=CC(=O)OC3=C2)[C@H](O[Si](C)(C)C)[C@@H](O)[C@@H]1O3005.8Semi standard non polar33892256
Umbelliferone glucuronide,2TMS,isomer #2C[Si](C)(C)OC(=O)[C@H]1O[C@@H](OC2=CC=C3C=CC(=O)OC3=C2)[C@H](O)[C@@H](O[Si](C)(C)C)[C@@H]1O3001.7Semi standard non polar33892256
Umbelliferone glucuronide,2TMS,isomer #3C[Si](C)(C)OC(=O)[C@H]1O[C@@H](OC2=CC=C3C=CC(=O)OC3=C2)[C@H](O)[C@@H](O)[C@@H]1O[Si](C)(C)C3010.1Semi standard non polar33892256
Umbelliferone glucuronide,2TMS,isomer #4C[Si](C)(C)O[C@@H]1[C@@H](C(=O)O)O[C@@H](OC2=CC=C3C=CC(=O)OC3=C2)[C@H](O[Si](C)(C)C)[C@H]1O3023.5Semi standard non polar33892256
Umbelliferone glucuronide,2TMS,isomer #5C[Si](C)(C)O[C@@H]1[C@@H](C(=O)O)O[C@@H](OC2=CC=C3C=CC(=O)OC3=C2)[C@H](O)[C@H]1O[Si](C)(C)C3007.0Semi standard non polar33892256
Umbelliferone glucuronide,2TMS,isomer #6C[Si](C)(C)O[C@H]1[C@H](O)[C@@H](C(=O)O)O[C@@H](OC2=CC=C3C=CC(=O)OC3=C2)[C@@H]1O[Si](C)(C)C3010.8Semi standard non polar33892256
Umbelliferone glucuronide,3TMS,isomer #1C[Si](C)(C)OC(=O)[C@H]1O[C@@H](OC2=CC=C3C=CC(=O)OC3=C2)[C@H](O[Si](C)(C)C)[C@@H](O[Si](C)(C)C)[C@@H]1O3037.8Semi standard non polar33892256
Umbelliferone glucuronide,3TMS,isomer #2C[Si](C)(C)OC(=O)[C@H]1O[C@@H](OC2=CC=C3C=CC(=O)OC3=C2)[C@H](O[Si](C)(C)C)[C@@H](O)[C@@H]1O[Si](C)(C)C3055.9Semi standard non polar33892256
Umbelliferone glucuronide,3TMS,isomer #3C[Si](C)(C)OC(=O)[C@H]1O[C@@H](OC2=CC=C3C=CC(=O)OC3=C2)[C@H](O)[C@@H](O[Si](C)(C)C)[C@@H]1O[Si](C)(C)C3038.4Semi standard non polar33892256
Umbelliferone glucuronide,3TMS,isomer #4C[Si](C)(C)O[C@@H]1[C@@H](O[Si](C)(C)C)[C@H](OC2=CC=C3C=CC(=O)OC3=C2)O[C@H](C(=O)O)[C@H]1O[Si](C)(C)C3044.1Semi standard non polar33892256
Umbelliferone glucuronide,4TMS,isomer #1C[Si](C)(C)OC(=O)[C@H]1O[C@@H](OC2=CC=C3C=CC(=O)OC3=C2)[C@H](O[Si](C)(C)C)[C@@H](O[Si](C)(C)C)[C@@H]1O[Si](C)(C)C3118.5Semi standard non polar33892256
Umbelliferone glucuronide,1TBDMS,isomer #1CC(C)(C)[Si](C)(C)OC(=O)[C@H]1O[C@@H](OC2=CC=C3C=CC(=O)OC3=C2)[C@H](O)[C@@H](O)[C@@H]1O3362.4Semi standard non polar33892256
Umbelliferone glucuronide,1TBDMS,isomer #2CC(C)(C)[Si](C)(C)O[C@@H]1[C@@H](C(=O)O)O[C@@H](OC2=CC=C3C=CC(=O)OC3=C2)[C@H](O)[C@H]1O3339.0Semi standard non polar33892256
Umbelliferone glucuronide,1TBDMS,isomer #3CC(C)(C)[Si](C)(C)O[C@@H]1[C@@H](O)[C@H](OC2=CC=C3C=CC(=O)OC3=C2)O[C@H](C(=O)O)[C@H]1O3354.9Semi standard non polar33892256
Umbelliferone glucuronide,1TBDMS,isomer #4CC(C)(C)[Si](C)(C)O[C@H]1[C@H](OC2=CC=C3C=CC(=O)OC3=C2)O[C@H](C(=O)O)[C@@H](O)[C@@H]1O3368.8Semi standard non polar33892256
Umbelliferone glucuronide,2TBDMS,isomer #1CC(C)(C)[Si](C)(C)OC(=O)[C@H]1O[C@@H](OC2=CC=C3C=CC(=O)OC3=C2)[C@H](O[Si](C)(C)C(C)(C)C)[C@@H](O)[C@@H]1O3598.9Semi standard non polar33892256
Umbelliferone glucuronide,2TBDMS,isomer #2CC(C)(C)[Si](C)(C)OC(=O)[C@H]1O[C@@H](OC2=CC=C3C=CC(=O)OC3=C2)[C@H](O)[C@@H](O[Si](C)(C)C(C)(C)C)[C@@H]1O3577.1Semi standard non polar33892256
Umbelliferone glucuronide,2TBDMS,isomer #3CC(C)(C)[Si](C)(C)OC(=O)[C@H]1O[C@@H](OC2=CC=C3C=CC(=O)OC3=C2)[C@H](O)[C@@H](O)[C@@H]1O[Si](C)(C)C(C)(C)C3598.0Semi standard non polar33892256
Umbelliferone glucuronide,2TBDMS,isomer #4CC(C)(C)[Si](C)(C)O[C@@H]1[C@@H](C(=O)O)O[C@@H](OC2=CC=C3C=CC(=O)OC3=C2)[C@H](O[Si](C)(C)C(C)(C)C)[C@H]1O3580.2Semi standard non polar33892256
Umbelliferone glucuronide,2TBDMS,isomer #5CC(C)(C)[Si](C)(C)O[C@@H]1[C@@H](C(=O)O)O[C@@H](OC2=CC=C3C=CC(=O)OC3=C2)[C@H](O)[C@H]1O[Si](C)(C)C(C)(C)C3565.9Semi standard non polar33892256
Umbelliferone glucuronide,2TBDMS,isomer #6CC(C)(C)[Si](C)(C)O[C@H]1[C@H](O)[C@@H](C(=O)O)O[C@@H](OC2=CC=C3C=CC(=O)OC3=C2)[C@@H]1O[Si](C)(C)C(C)(C)C3586.4Semi standard non polar33892256
Umbelliferone glucuronide,3TBDMS,isomer #1CC(C)(C)[Si](C)(C)OC(=O)[C@H]1O[C@@H](OC2=CC=C3C=CC(=O)OC3=C2)[C@H](O[Si](C)(C)C(C)(C)C)[C@@H](O[Si](C)(C)C(C)(C)C)[C@@H]1O3783.0Semi standard non polar33892256
Umbelliferone glucuronide,3TBDMS,isomer #2CC(C)(C)[Si](C)(C)OC(=O)[C@H]1O[C@@H](OC2=CC=C3C=CC(=O)OC3=C2)[C@H](O[Si](C)(C)C(C)(C)C)[C@@H](O)[C@@H]1O[Si](C)(C)C(C)(C)C3820.4Semi standard non polar33892256
Umbelliferone glucuronide,3TBDMS,isomer #3CC(C)(C)[Si](C)(C)OC(=O)[C@H]1O[C@@H](OC2=CC=C3C=CC(=O)OC3=C2)[C@H](O)[C@@H](O[Si](C)(C)C(C)(C)C)[C@@H]1O[Si](C)(C)C(C)(C)C3778.7Semi standard non polar33892256
Umbelliferone glucuronide,3TBDMS,isomer #4CC(C)(C)[Si](C)(C)O[C@@H]1[C@@H](O[Si](C)(C)C(C)(C)C)[C@H](OC2=CC=C3C=CC(=O)OC3=C2)O[C@H](C(=O)O)[C@H]1O[Si](C)(C)C(C)(C)C3790.7Semi standard non polar33892256
Umbelliferone glucuronide,4TBDMS,isomer #1CC(C)(C)[Si](C)(C)OC(=O)[C@H]1O[C@@H](OC2=CC=C3C=CC(=O)OC3=C2)[C@H](O[Si](C)(C)C(C)(C)C)[C@@H](O[Si](C)(C)C(C)(C)C)[C@@H]1O[Si](C)(C)C(C)(C)C3999.4Semi standard non polar33892256
Spectra

GC-MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted GC-MSPredicted GC-MS Spectrum - Umbelliferone glucuronide GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Umbelliferone glucuronide 10V, Positive-QTOFsplash10-03di-0903000000-4b0f2205dbb542cb7d562021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Umbelliferone glucuronide 20V, Positive-QTOFsplash10-03di-0900000000-5addba3a6ae66254eeb62021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Umbelliferone glucuronide 40V, Positive-QTOFsplash10-03di-1920000000-40b88048789a2d97d3df2021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Umbelliferone glucuronide 10V, Negative-QTOFsplash10-03di-0901000000-0c201de8e73767ab82d42021-09-23Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Umbelliferone glucuronide 20V, Negative-QTOFsplash10-03di-2902000000-495559be14923f1eaf162021-09-23Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Umbelliferone glucuronide 40V, Negative-QTOFsplash10-03xr-2900000000-12637ee626dfa08377872021-09-23Wishart LabView Spectrum

NMR Spectra

Spectrum TypeDescriptionDeposition DateSourceView
Predicted 1D NMR13C NMR Spectrum (1D, 100 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 100 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 1000 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 1000 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 200 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 200 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 300 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 300 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 400 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 400 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 500 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 500 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 600 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 600 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 700 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 700 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 800 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 800 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 900 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 900 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Biological Properties
Cellular LocationsNot Available
Biospecimen Locations
  • Blood
  • Urine
Tissue LocationsNot Available
Pathways
Normal Concentrations
BiospecimenStatusValueAgeSexConditionReferenceDetails
BloodDetected but not QuantifiedNot QuantifiedAdult (>18 years old)BothNormal details
UrineDetected but not QuantifiedNot QuantifiedAdult (>18 years old)BothNormal details
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDFDB093763
KNApSAcK IDNot Available
Chemspider ID111757
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound125641
PDB IDNot Available
ChEBI ID33678
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDNot Available
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General ReferencesNot Available