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Record Information
Version5.0
StatusExpected but not Quantified
Creation Date2021-08-28 06:36:13 UTC
Update Date2021-08-28 06:36:13 UTC
HMDB IDHMDB0242185
Secondary Accession NumbersNone
Metabolite Identification
Common NameN-Oleoyl-L-Serine
DescriptionN-Oleoyl-L-Serine, also known as N-oleoylserine, belongs to the class of organic compounds known as n-acyl-l-alpha-amino acids. These are n-acylated alpha amino acids which have the L-configuration of the alpha-carbon atom. Thus, N-oleoyl-L-serine is considered to be a fatty amide. N-Oleoyl-L-Serine is a secondary metabolite. Secondary metabolites are metabolically or physiologically non-essential metabolites that may serve a role as defense or signalling molecules. In some cases they are simply molecules that arise from the incomplete metabolism of other secondary metabolites. Based on a literature review a small amount of articles have been published on N-Oleoyl-L-Serine.
Structure
Thumb
Synonyms
ValueSource
(2S)-3-Hydroxy-2-{[(9R)-octadec-9-enoyl]amino}propanoic acidChEBI
N-(9Z-Octadecenoyl)-L-serineChEBI
N-[(9Z)-Octadecenoyl]-L-serineChEBI
N-[(9Z)-Octadecenoyl]serineChEBI
N-OleoylserineChEBI
OleoylserineChEBI
(2S)-3-Hydroxy-2-{[(9R)-octadec-9-enoyl]amino}propanoateGenerator
Chemical FormulaC21H39NO4
Average Molecular Weight369.546
Monoisotopic Molecular Weight369.28790874
IUPAC Name(2S)-3-hydroxy-2-{[(9Z)-1-hydroxyoctadec-9-en-1-ylidene]amino}propanoic acid
Traditional Name(2S)-3-hydroxy-2-{[(9Z)-1-hydroxyoctadec-9-en-1-ylidene]amino}propanoic acid
CAS Registry NumberNot Available
SMILES
[H]\C(CCCCCCCC)=C(/[H])CCCCCCCC(O)=N[C@@]([H])(CO)C(O)=O
InChI Identifier
InChI=1S/C21H39NO4/c1-2-3-4-5-6-7-8-9-10-11-12-13-14-15-16-17-20(24)22-19(18-23)21(25)26/h9-10,19,23H,2-8,11-18H2,1H3,(H,22,24)(H,25,26)/b10-9-/t19-/m0/s1
InChI KeyMBDKGXAMSZIDKF-VJIACCKLSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as n-acyl-l-alpha-amino acids. These are n-acylated alpha amino acids which have the L-configuration of the alpha-carbon atom.
KingdomOrganic compounds
Super ClassOrganic acids and derivatives
ClassCarboxylic acids and derivatives
Sub ClassAmino acids, peptides, and analogues
Direct ParentN-acyl-L-alpha-amino acids
Alternative Parents
Substituents
  • N-acyl-l-alpha-amino acid
  • Serine or derivatives
  • Beta-hydroxy acid
  • Fatty amide
  • Hydroxy acid
  • Fatty acyl
  • N-acyl-amine
  • Carboxamide group
  • Secondary carboxylic acid amide
  • Carboxylic acid
  • Monocarboxylic acid or derivatives
  • Primary alcohol
  • Hydrocarbon derivative
  • Organic oxide
  • Alcohol
  • Organic oxygen compound
  • Carbonyl group
  • Organic nitrogen compound
  • Organonitrogen compound
  • Organooxygen compound
  • Aliphatic acyclic compound
Molecular FrameworkAliphatic acyclic compounds
External DescriptorsNot Available
Ontology
Physiological effectNot Available
DispositionNot Available
ProcessNot Available
RoleNot Available
Physical Properties
StateNot Available
Experimental Molecular Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
logP6.02ChemAxon
pKa (Strongest Acidic)3.92ChemAxon
pKa (Strongest Basic)0.79ChemAxon
Physiological Charge-1ChemAxon
Hydrogen Acceptor Count5ChemAxon
Hydrogen Donor Count3ChemAxon
Polar Surface Area90.12 ŲChemAxon
Rotatable Bond Count18ChemAxon
Refractivity106.76 m³·mol⁻¹ChemAxon
Polarizability45.19 ųChemAxon
Number of Rings0ChemAxon
BioavailabilityNoChemAxon
Rule of FiveNoChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DeepCCS[M+H]+215.02930932474
DeepCCS[M-H]-211.17630932474
DeepCCS[M-2H]-247.55330932474
DeepCCS[M+Na]+223.84430932474

Predicted Kovats Retention Indices

Underivatized

MetaboliteSMILESKovats RI ValueColumn TypeReference
N-Oleoyl-L-Serine[H]\C(CCCCCCCC)=C(/[H])CCCCCCCC(O)=N[C@@]([H])(CO)C(O)=O3755.1Standard polar33892256
N-Oleoyl-L-Serine[H]\C(CCCCCCCC)=C(/[H])CCCCCCCC(O)=N[C@@]([H])(CO)C(O)=O2739.1Standard non polar33892256
N-Oleoyl-L-Serine[H]\C(CCCCCCCC)=C(/[H])CCCCCCCC(O)=N[C@@]([H])(CO)C(O)=O2921.6Semi standard non polar33892256
Spectra

GC-MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted GC-MSPredicted GC-MS Spectrum - N-Oleoyl-L-Serine GC-MS (Non-derivatized) - 70eV, Positivesplash10-0fk9-7975000000-0a853cdca3010984cd192021-09-23Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - N-Oleoyl-L-Serine GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - N-Oleoyl-L-Serine 10V, Positive-QTOFsplash10-05fr-3759000000-f073af72505b4e5efafe2021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - N-Oleoyl-L-Serine 20V, Positive-QTOFsplash10-059i-5971000000-da8522bccd848cb391562021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - N-Oleoyl-L-Serine 40V, Positive-QTOFsplash10-0h9a-6900000000-3f6fe5b65cfc0cf9177d2021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - N-Oleoyl-L-Serine 10V, Negative-QTOFsplash10-0gb9-0249000000-759b41707da64b58272c2021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - N-Oleoyl-L-Serine 20V, Negative-QTOFsplash10-014i-3597000000-3109a7a1dfa93d3a42752021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - N-Oleoyl-L-Serine 40V, Negative-QTOFsplash10-0pbi-9450000000-68937d1badaa3c37f4ed2021-10-12Wishart LabView Spectrum
Biological Properties
Cellular LocationsNot Available
Biospecimen LocationsNot Available
Tissue LocationsNot Available
Pathways
Normal Concentrations
Not Available
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDNot Available
KNApSAcK IDNot Available
Chemspider ID29341560
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound44190514
PDB IDNot Available
ChEBI ID136614
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDNot Available
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General References
  1. Kong SW, Hernandez-Ferrer C: Assessment of coverage for endogenous metabolites and exogenous chemical compounds using an untargeted metabolomics platform. Pac Symp Biocomput. 2020;25:587-598. [PubMed:31797630 ]