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Record Information
Version5.0
StatusDetected but not Quantified
Creation Date2021-09-07 01:18:39 UTC
Update Date2021-09-26 22:50:21 UTC
HMDB IDHMDB0242674
Secondary Accession NumbersNone
Metabolite Identification
Common NameGriseolic acid
DescriptionGriseolic acid, also known as griseolate, belongs to the class of organic compounds known as purine nucleosides. Purine nucleosides are compounds comprising a purine base attached to a ribosyl or deoxyribosyl moiety. Based on a literature review a small amount of articles have been published on Griseolic acid. This compound has been identified in human blood as reported by (PMID: 31557052 ). Griseolic acid is not a naturally occurring metabolite and is only found in those individuals exposed to this compound or its derivatives. Technically Griseolic acid is part of the human exposome. The exposome can be defined as the collection of all the exposures of an individual in a lifetime and how those exposures relate to health. An individual's exposure begins before birth and includes insults from environmental and occupational sources.
Structure
Thumb
Synonyms
ValueSource
GriseolateGenerator
5-(6-Amino-9H-purin-9-yl)-2-[carboxy(hydroxy)methyl]-6-hydroxy-2H,5H,6H,6ah-furo[3,2-b]furan-2-carboxylateHMDB
Chemical FormulaC14H13N5O8
Average Molecular Weight379.285
Monoisotopic Molecular Weight379.076412399
IUPAC Name5-(6-amino-9H-purin-9-yl)-2-[carboxy(hydroxy)methyl]-6-hydroxy-2H,5H,6H,6aH-furo[3,2-b]furan-2-carboxylic acid
Traditional Name5-(6-aminopurin-9-yl)-2-[carboxy(hydroxy)methyl]-6-hydroxy-5H,6H,6aH-furo[3,2-b]furan-2-carboxylic acid
CAS Registry NumberNot Available
SMILES
NC1=C2N=CN(C3OC4=CC(OC4C3O)(C(O)C(O)=O)C(O)=O)C2=NC=N1
InChI Identifier
InChI=1S/C14H13N5O8/c15-9-5-10(17-2-16-9)19(3-18-5)11-6(20)7-4(26-11)1-14(27-7,13(24)25)8(21)12(22)23/h1-3,6-8,11,20-21H,(H,22,23)(H,24,25)(H2,15,16,17)
InChI KeyIAPZXUKYTCQQFE-UHFFFAOYSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as purine nucleosides. Purine nucleosides are compounds comprising a purine base attached to a ribosyl or deoxyribosyl moiety.
KingdomOrganic compounds
Super ClassNucleosides, nucleotides, and analogues
ClassPurine nucleosides
Sub ClassNot Available
Direct ParentPurine nucleosides
Alternative Parents
Substituents
  • Purine nucleoside
  • Glycosyl compound
  • N-glycosyl compound
  • 6-aminopurine
  • Purine
  • Imidazopyrimidine
  • Aminopyrimidine
  • N-substituted imidazole
  • Pyrimidine
  • Imidolactam
  • Tetrahydrofuran
  • Azole
  • Heteroaromatic compound
  • Imidazole
  • Secondary carboxylic acid amide
  • Secondary alcohol
  • 1,2-diol
  • Amino acid or derivatives
  • Carboxamide group
  • Carboxylic acid derivative
  • Organoheterocyclic compound
  • Azacycle
  • Oxacycle
  • Organic nitrogen compound
  • Organonitrogen compound
  • Organooxygen compound
  • Primary amine
  • Carbonyl group
  • Hydrocarbon derivative
  • Organic oxide
  • Organopnictogen compound
  • Amine
  • Alcohol
  • Organic oxygen compound
  • Aromatic heteropolycyclic compound
Molecular FrameworkAromatic heteropolycyclic compounds
External DescriptorsNot Available
Ontology
Physiological effectNot Available
Disposition
ProcessNot Available
RoleNot Available
Physical Properties
StateNot Available
Experimental Molecular Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
logP-1.2ALOGPS
logP-4.2ChemAxon
logS-1.8ALOGPS
pKa (Strongest Acidic)2.86ChemAxon
pKa (Strongest Basic)5.13ChemAxon
Physiological Charge-2ChemAxon
Hydrogen Acceptor Count12ChemAxon
Hydrogen Donor Count5ChemAxon
Polar Surface Area203.14 ŲChemAxon
Rotatable Bond Count4ChemAxon
Refractivity83.85 m³·mol⁻¹ChemAxon
Polarizability33.71 ųChemAxon
Number of Rings4ChemAxon
BioavailabilityNoChemAxon
Rule of FiveNoChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DeepCCS[M+H]+180.05230932474
DeepCCS[M-H]-177.69430932474
DeepCCS[M-2H]-211.8630932474
DeepCCS[M+Na]+187.88530932474
AllCCS[M+H]+183.832859911
AllCCS[M+H-H2O]+181.032859911
AllCCS[M+NH4]+186.432859911
AllCCS[M+Na]+187.232859911
AllCCS[M-H]-181.832859911
AllCCS[M+Na-2H]-181.032859911
AllCCS[M+HCOO]-180.432859911

Predicted Kovats Retention Indices

Underivatized

MetaboliteSMILESKovats RI ValueColumn TypeReference
Griseolic acidNC1=C2N=CN(C3OC4=CC(OC4C3O)(C(O)C(O)=O)C(O)=O)C2=NC=N14734.1Standard polar33892256
Griseolic acidNC1=C2N=CN(C3OC4=CC(OC4C3O)(C(O)C(O)=O)C(O)=O)C2=NC=N12483.9Standard non polar33892256
Griseolic acidNC1=C2N=CN(C3OC4=CC(OC4C3O)(C(O)C(O)=O)C(O)=O)C2=NC=N13396.5Semi standard non polar33892256

Derivatized

Derivative Name / StructureSMILESKovats RI ValueColumn TypeReference
Griseolic acid,5TMS,isomer #1C[Si](C)(C)NC1=NC=NC2=C1N=CN2C1OC2=CC(C(=O)O[Si](C)(C)C)(C(O[Si](C)(C)C)C(=O)O[Si](C)(C)C)OC2C1O[Si](C)(C)C3296.8Semi standard non polar33892256
Griseolic acid,5TMS,isomer #1C[Si](C)(C)NC1=NC=NC2=C1N=CN2C1OC2=CC(C(=O)O[Si](C)(C)C)(C(O[Si](C)(C)C)C(=O)O[Si](C)(C)C)OC2C1O[Si](C)(C)C3201.7Standard non polar33892256
Griseolic acid,5TMS,isomer #1C[Si](C)(C)NC1=NC=NC2=C1N=CN2C1OC2=CC(C(=O)O[Si](C)(C)C)(C(O[Si](C)(C)C)C(=O)O[Si](C)(C)C)OC2C1O[Si](C)(C)C4550.4Standard polar33892256
Griseolic acid,5TMS,isomer #2C[Si](C)(C)OC(=O)C1(C(O[Si](C)(C)C)C(=O)O)C=C2OC(N3C=NC4=C(N([Si](C)(C)C)[Si](C)(C)C)N=CN=C43)C(O[Si](C)(C)C)C2O13329.0Semi standard non polar33892256
Griseolic acid,5TMS,isomer #2C[Si](C)(C)OC(=O)C1(C(O[Si](C)(C)C)C(=O)O)C=C2OC(N3C=NC4=C(N([Si](C)(C)C)[Si](C)(C)C)N=CN=C43)C(O[Si](C)(C)C)C2O13233.1Standard non polar33892256
Griseolic acid,5TMS,isomer #2C[Si](C)(C)OC(=O)C1(C(O[Si](C)(C)C)C(=O)O)C=C2OC(N3C=NC4=C(N([Si](C)(C)C)[Si](C)(C)C)N=CN=C43)C(O[Si](C)(C)C)C2O14348.0Standard polar33892256
Griseolic acid,5TMS,isomer #3C[Si](C)(C)OC(=O)C(O)C1(C(=O)O[Si](C)(C)C)C=C2OC(N3C=NC4=C(N([Si](C)(C)C)[Si](C)(C)C)N=CN=C43)C(O[Si](C)(C)C)C2O13329.2Semi standard non polar33892256
Griseolic acid,5TMS,isomer #3C[Si](C)(C)OC(=O)C(O)C1(C(=O)O[Si](C)(C)C)C=C2OC(N3C=NC4=C(N([Si](C)(C)C)[Si](C)(C)C)N=CN=C43)C(O[Si](C)(C)C)C2O13265.5Standard non polar33892256
Griseolic acid,5TMS,isomer #3C[Si](C)(C)OC(=O)C(O)C1(C(=O)O[Si](C)(C)C)C=C2OC(N3C=NC4=C(N([Si](C)(C)C)[Si](C)(C)C)N=CN=C43)C(O[Si](C)(C)C)C2O14421.5Standard polar33892256
Griseolic acid,5TMS,isomer #4C[Si](C)(C)OC(=O)C(O[Si](C)(C)C)C1(C(=O)O)C=C2OC(N3C=NC4=C(N([Si](C)(C)C)[Si](C)(C)C)N=CN=C43)C(O[Si](C)(C)C)C2O13335.0Semi standard non polar33892256
Griseolic acid,5TMS,isomer #4C[Si](C)(C)OC(=O)C(O[Si](C)(C)C)C1(C(=O)O)C=C2OC(N3C=NC4=C(N([Si](C)(C)C)[Si](C)(C)C)N=CN=C43)C(O[Si](C)(C)C)C2O13291.7Standard non polar33892256
Griseolic acid,5TMS,isomer #4C[Si](C)(C)OC(=O)C(O[Si](C)(C)C)C1(C(=O)O)C=C2OC(N3C=NC4=C(N([Si](C)(C)C)[Si](C)(C)C)N=CN=C43)C(O[Si](C)(C)C)C2O14427.1Standard polar33892256
Griseolic acid,5TMS,isomer #5C[Si](C)(C)OC(=O)C(O[Si](C)(C)C)C1(C(=O)O[Si](C)(C)C)C=C2OC(N3C=NC4=C(N([Si](C)(C)C)[Si](C)(C)C)N=CN=C43)C(O)C2O13343.0Semi standard non polar33892256
Griseolic acid,5TMS,isomer #5C[Si](C)(C)OC(=O)C(O[Si](C)(C)C)C1(C(=O)O[Si](C)(C)C)C=C2OC(N3C=NC4=C(N([Si](C)(C)C)[Si](C)(C)C)N=CN=C43)C(O)C2O13268.7Standard non polar33892256
Griseolic acid,5TMS,isomer #5C[Si](C)(C)OC(=O)C(O[Si](C)(C)C)C1(C(=O)O[Si](C)(C)C)C=C2OC(N3C=NC4=C(N([Si](C)(C)C)[Si](C)(C)C)N=CN=C43)C(O)C2O14340.4Standard polar33892256
Griseolic acid,6TMS,isomer #1C[Si](C)(C)OC(=O)C(O[Si](C)(C)C)C1(C(=O)O[Si](C)(C)C)C=C2OC(N3C=NC4=C(N([Si](C)(C)C)[Si](C)(C)C)N=CN=C43)C(O[Si](C)(C)C)C2O13336.0Semi standard non polar33892256
Griseolic acid,6TMS,isomer #1C[Si](C)(C)OC(=O)C(O[Si](C)(C)C)C1(C(=O)O[Si](C)(C)C)C=C2OC(N3C=NC4=C(N([Si](C)(C)C)[Si](C)(C)C)N=CN=C43)C(O[Si](C)(C)C)C2O13234.7Standard non polar33892256
Griseolic acid,6TMS,isomer #1C[Si](C)(C)OC(=O)C(O[Si](C)(C)C)C1(C(=O)O[Si](C)(C)C)C=C2OC(N3C=NC4=C(N([Si](C)(C)C)[Si](C)(C)C)N=CN=C43)C(O[Si](C)(C)C)C2O14103.6Standard polar33892256
Spectra

GC-MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted GC-MSPredicted GC-MS Spectrum - Griseolic acid GC-MS (Non-derivatized) - 70eV, Positivesplash10-052f-9221000000-1848fbf437e79a8ec2e72021-09-24Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Griseolic acid GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Griseolic acid GC-MS (TMS_1_1) - 70eV, PositiveNot Available2021-11-03Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Griseolic acid GC-MS (TMS_1_2) - 70eV, PositiveNot Available2021-11-03Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Griseolic acid GC-MS (TMS_1_3) - 70eV, PositiveNot Available2021-11-03Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Griseolic acid GC-MS (TMS_1_4) - 70eV, PositiveNot Available2021-11-03Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Griseolic acid GC-MS (TMS_1_5) - 70eV, PositiveNot Available2021-11-03Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Griseolic acid GC-MS (TMS_2_1) - 70eV, PositiveNot Available2021-11-03Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Griseolic acid GC-MS (TMS_2_2) - 70eV, PositiveNot Available2021-11-03Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Griseolic acid GC-MS (TMS_2_3) - 70eV, PositiveNot Available2021-11-03Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Griseolic acid GC-MS (TMS_2_4) - 70eV, PositiveNot Available2021-11-03Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Griseolic acid GC-MS (TMS_2_5) - 70eV, PositiveNot Available2021-11-03Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Griseolic acid GC-MS (TMS_2_6) - 70eV, PositiveNot Available2021-11-03Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Griseolic acid GC-MS (TMS_2_7) - 70eV, PositiveNot Available2021-11-03Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Griseolic acid GC-MS (TMS_2_8) - 70eV, PositiveNot Available2021-11-03Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Griseolic acid GC-MS (TMS_2_9) - 70eV, PositiveNot Available2021-11-03Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Griseolic acid GC-MS (TMS_2_10) - 70eV, PositiveNot Available2021-11-03Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Griseolic acid GC-MS (TMS_2_11) - 70eV, PositiveNot Available2021-11-03Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Griseolic acid GC-MS (TMS_3_1) - 70eV, PositiveNot Available2021-11-03Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Griseolic acid GC-MS (TMS_3_2) - 70eV, PositiveNot Available2021-11-03Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Griseolic acid GC-MS (TMS_3_3) - 70eV, PositiveNot Available2021-11-03Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Griseolic acid GC-MS (TMS_3_4) - 70eV, PositiveNot Available2021-11-03Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Griseolic acid GC-MS (TMS_3_5) - 70eV, PositiveNot Available2021-11-03Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Griseolic acid GC-MS (TMS_3_6) - 70eV, PositiveNot Available2021-11-03Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Griseolic acid GC-MS (TMS_3_7) - 70eV, PositiveNot Available2021-11-03Wishart LabView Spectrum

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Griseolic acid 10V, Positive-QTOFsplash10-001i-0009000000-115e201d92f8b87fd6f32021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Griseolic acid 20V, Positive-QTOFsplash10-000i-1934000000-f2b960c52c4e0b00f50c2021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Griseolic acid 40V, Positive-QTOFsplash10-000i-3945000000-baca3f60fcae94e529302021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Griseolic acid 10V, Negative-QTOFsplash10-014i-0039000000-3c604a06510decae68302021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Griseolic acid 20V, Negative-QTOFsplash10-05p9-4094000000-c710585ae34d1c53ed8b2021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Griseolic acid 40V, Negative-QTOFsplash10-001i-0910000000-e2325fa1fe2172c8bed02021-10-12Wishart LabView Spectrum

NMR Spectra

Spectrum TypeDescriptionDeposition DateSourceView
Predicted 1D NMR13C NMR Spectrum (1D, 100 MHz, D2O, predicted)2021-10-12Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 100 MHz, D2O, predicted)2021-10-12Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 1000 MHz, D2O, predicted)2021-10-12Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 1000 MHz, D2O, predicted)2021-10-12Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 200 MHz, D2O, predicted)2021-10-12Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 200 MHz, D2O, predicted)2021-10-12Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 300 MHz, D2O, predicted)2021-10-12Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 300 MHz, D2O, predicted)2021-10-12Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 400 MHz, D2O, predicted)2021-10-12Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 400 MHz, D2O, predicted)2021-10-12Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 500 MHz, D2O, predicted)2021-10-12Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 500 MHz, D2O, predicted)2021-10-12Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 600 MHz, D2O, predicted)2021-10-12Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 600 MHz, D2O, predicted)2021-10-12Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 700 MHz, D2O, predicted)2021-10-12Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 700 MHz, D2O, predicted)2021-10-12Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 800 MHz, D2O, predicted)2021-10-12Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 800 MHz, D2O, predicted)2021-10-12Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 900 MHz, D2O, predicted)2021-10-12Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 900 MHz, D2O, predicted)2021-10-12Wishart LabView Spectrum
Biological Properties
Cellular LocationsNot Available
Biospecimen Locations
  • Blood
Tissue LocationsNot Available
Pathways
Normal Concentrations
BiospecimenStatusValueAgeSexConditionReferenceDetails
BloodDetected but not QuantifiedNot QuantifiedNot SpecifiedNot SpecifiedNormal details
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDNot Available
KNApSAcK IDC00018645
Chemspider ID113211
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound127607
PDB IDNot Available
ChEBI IDNot Available
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDNot Available
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General References
  1. Barupal DK, Fiehn O: Generating the Blood Exposome Database Using a Comprehensive Text Mining and Database Fusion Approach. Environ Health Perspect. 2019 Sep;127(9):97008. doi: 10.1289/EHP4713. Epub 2019 Sep 26. [PubMed:31557052 ]