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Record Information

Version

5.0

Status

Detected but not Quantified

Creation Date

2021-09-10 22:56:15 UTC

Update Date

2021-09-26 22:54:37 UTC

HMDB ID

HMDB0245889

Secondary Accession Numbers

None

Metabolite Identification

Common Name

3beta-Hydroxy-5,7-androstadien-17-one

Description

3beta-Hydroxy-5,7-androstadien-17-one, also known as 3-BHADO, belongs to the class of organic compounds known as androgens and derivatives. These are 3-hydroxylated C19 steroid hormones. They are known to favor the development of masculine characteristics. They also show profound effects on scalp and body hair in humans. Based on a literature review very few articles have been published on 3beta-Hydroxy-5,7-androstadien-17-one. This compound has been identified in human blood as reported by (PMID: 31557052 ). 3beta-hydroxy-5,7-androstadien-17-one is not a naturally occurring metabolite and is only found in those individuals exposed to this compound or its derivatives. Technically 3beta-Hydroxy-5,7-androstadien-17-one is part of the human exposome. The exposome can be defined as the collection of all the exposures of an individual in a lifetime and how those exposures relate to health. An individual's exposure begins before birth and includes insults from environmental and occupational sources.

Structure

MOL 3D MOL SDF 3D SDF PDB 3D PDB SMILES InChI

HMDB0245889
     RDKit          3D
3beta-Hydroxy-5,7-androstadien-17-one
 47 50  0  0  0  0  0  0  0  0999 V2000
   -3.4995    1.1516   -1.1425 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.9831    0.2261   -0.0664 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2443    1.0721    0.9467 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9199    1.5022    0.2997 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0771    0.2046    0.2728 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7255   -0.6498   -0.7209 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0867   -1.2311   -1.7301 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.3443   -0.9731   -1.8162 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.9951   -0.2184   -0.9793 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.4883   -0.0736   -1.2223 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.1991   -0.0050    0.1139 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.3603   -0.8060    0.0330 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.3338   -0.6228    1.1699 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.0770    0.1838    1.4429 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.3553    0.4929    0.1231 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.5951    2.0067   -0.1021 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1822   -0.9049   -0.6023 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3336   -1.9784    0.4795 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.5933   -1.6604    1.2225 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.1326   -0.4559    0.5609 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.2857   -0.1140    0.5468 O   0  0  0  0  0  0  0  0  0  0  0  0
   -3.8819    2.0585   -0.6305 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7478    1.4483   -1.8701 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.3517    0.7141   -1.6998 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9528    0.4409    1.8115 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8717    1.9193    1.2129 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4269    2.3045    0.8470 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0704    1.7810   -0.7526 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2476   -0.2091    1.3205 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6288   -1.8486   -2.4220 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.8757   -1.4679   -2.6599 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.6177    0.8715   -1.7592 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.8439   -0.9590   -1.7683 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.4528    1.0262    0.4108 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.9876   -0.4461   -0.6566 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.0716   -1.6726    0.9424 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.9259   -0.5776    2.1310 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.3453    1.0977    1.9937 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.4394   -0.4326    2.1094 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.5979    2.5319    0.8854 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.8365    2.4378   -0.7615 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.5826    2.0993   -0.5641 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5785   -1.2532   -1.5645 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3628   -2.9984    0.0077 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4446   -1.9921    1.1506 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.2675   -2.5362    1.1511 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.4287   -1.4841    2.3054 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  1  0
  3  4  1  0
  4  5  1  0
  5  6  1  0
  6  7  2  0
  7  8  1  0
  8  9  2  0
  9 10  1  0
 10 11  1  0
 11 12  1  0
 11 13  1  0
 13 14  1  0
 14 15  1  0
 15 16  1  0
  6 17  1  0
 17 18  1  0
 18 19  1  0
 19 20  1  0
 20 21  2  0
 17  2  1  0
 20  2  1  0
 15  5  1  0
 15  9  1  0
  1 22  1  0
  1 23  1  0
  1 24  1  0
  3 25  1  0
  3 26  1  0
  4 27  1  0
  4 28  1  0
  5 29  1  0
  7 30  1  0
  8 31  1  0
 10 32  1  0
 10 33  1  0
 11 34  1  0
 12 35  1  0
 13 36  1  0
 13 37  1  0
 14 38  1  0
 14 39  1  0
 16 40  1  0
 16 41  1  0
 16 42  1  0
 17 43  1  0
 18 44  1  0
 18 45  1  0
 19 46  1  0
 19 47  1  0
M  END

  Mrv1652309112100562D          

 21 24  0  0  0  0            999 V2000
   -2.0361   -0.6122    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6762   -1.3546    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1444   -0.7239    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3323   -0.8691    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0520   -1.6450    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5838   -2.2757    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3035   -3.0516    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.5086   -3.1969    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.0404   -2.5662    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7601   -1.7902    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.2920   -1.1595    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1041   -1.3047    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.3844   -2.0807    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.8526   -2.7114    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.1965   -2.2259    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.4798   -1.0143    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3959   -2.1305    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0473   -2.6369    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7301   -2.1739    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5008   -1.3814    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0071   -0.7301    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  1  0  0  0  0
  3  4  1  0  0  0  0
  4  5  1  0  0  0  0
  5  6  1  0  0  0  0
  6  7  2  0  0  0  0
  7  8  1  0  0  0  0
  8  9  2  0  0  0  0
  9 10  1  0  0  0  0
  5 10  1  0  0  0  0
 10 11  1  0  0  0  0
 11 12  1  0  0  0  0
 12 13  1  0  0  0  0
 13 14  1  0  0  0  0
  9 14  1  0  0  0  0
 13 15  1  0  0  0  0
 10 16  1  0  0  0  0
  6 17  1  0  0  0  0
  2 17  1  0  0  0  0
 17 18  1  0  0  0  0
 18 19  1  0  0  0  0
 19 20  1  0  0  0  0
  2 20  1  0  0  0  0
 20 21  2  0  0  0  0
M  END
> <DATABASE_ID>
HMDB0245889

> <DATABASE_NAME>
hmdb

> <SMILES>
CC12CCC3C(=CC=C4CC(O)CCC34C)C1CCC2=O

> <INCHI_IDENTIFIER>
InChI=1S/C19H26O2/c1-18-9-7-13(20)11-12(18)3-4-14-15-5-6-17(21)19(15,2)10-8-16(14)18/h3-4,13,15-16,20H,5-11H2,1-2H3

> <INCHI_KEY>
QKVSSSWYCZWEQM-UHFFFAOYSA-N

> <FORMULA>
C19H26O2

> <MOLECULAR_WEIGHT>
286.415

> <EXACT_MASS>
286.193280077

> <JCHEM_ACCEPTOR_COUNT>
2

> <JCHEM_ATOM_COUNT>
47

> <JCHEM_AVERAGE_POLARIZABILITY>
33.101878398822635

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
1

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
1

> <JCHEM_IUPAC>
5-hydroxy-2,15-dimethyltetracyclo[8.7.0.0^{2,7}.0^{11,15}]heptadeca-7,9-dien-14-one

> <ALOGPS_LOGP>
3.80

> <JCHEM_LOGP>
2.956125574000001

> <ALOGPS_LOGS>
-3.92

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
4

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA>
19.642353767001804

> <JCHEM_PKA_STRONGEST_ACIDIC>
18.27080542144437

> <JCHEM_PKA_STRONGEST_BASIC>
-1.3681493742046138

> <JCHEM_POLAR_SURFACE_AREA>
37.3

> <JCHEM_REFRACTIVITY>
85.50889999999998

> <JCHEM_ROTATABLE_BOND_COUNT>
0

> <JCHEM_RULE_OF_FIVE>
1

> <ALOGPS_SOLUBILITY>
3.43e-02 g/l

> <JCHEM_TRADITIONAL_IUPAC>
5-hydroxy-2,15-dimethyltetracyclo[8.7.0.0^{2,7}.0^{11,15}]heptadeca-7,9-dien-14-one

> <JCHEM_VEBER_RULE>
1

$$$$

HMDB0245889
     RDKit          3D
3beta-Hydroxy-5,7-androstadien-17-one
 47 50  0  0  0  0  0  0  0  0999 V2000
   -3.4995    1.1516   -1.1425 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.9831    0.2261   -0.0664 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2443    1.0721    0.9467 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9199    1.5022    0.2997 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0771    0.2046    0.2728 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7255   -0.6498   -0.7209 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0867   -1.2311   -1.7301 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.3443   -0.9731   -1.8162 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.9951   -0.2184   -0.9793 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.4883   -0.0736   -1.2223 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.1991   -0.0050    0.1139 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.3603   -0.8060    0.0330 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.3338   -0.6228    1.1699 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.0770    0.1838    1.4429 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.3553    0.4929    0.1231 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.5951    2.0067   -0.1021 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1822   -0.9049   -0.6023 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3336   -1.9784    0.4795 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.5933   -1.6604    1.2225 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.1326   -0.4559    0.5609 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.2857   -0.1140    0.5468 O   0  0  0  0  0  0  0  0  0  0  0  0
   -3.8819    2.0585   -0.6305 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7478    1.4483   -1.8701 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.3517    0.7141   -1.6998 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9528    0.4409    1.8115 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8717    1.9193    1.2129 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4269    2.3045    0.8470 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0704    1.7810   -0.7526 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2476   -0.2091    1.3205 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6288   -1.8486   -2.4220 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.8757   -1.4679   -2.6599 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.6177    0.8715   -1.7592 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.8439   -0.9590   -1.7683 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.4528    1.0262    0.4108 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.9876   -0.4461   -0.6566 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.0716   -1.6726    0.9424 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.9259   -0.5776    2.1310 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.3453    1.0977    1.9937 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.4394   -0.4326    2.1094 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.5979    2.5319    0.8854 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.8365    2.4378   -0.7615 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.5826    2.0993   -0.5641 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5785   -1.2532   -1.5645 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3628   -2.9984    0.0077 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4446   -1.9921    1.1506 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.2675   -2.5362    1.1511 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.4287   -1.4841    2.3054 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  1  0
  3  4  1  0
  4  5  1  0
  5  6  1  0
  6  7  2  0
  7  8  1  0
  8  9  2  0
  9 10  1  0
 10 11  1  0
 11 12  1  0
 11 13  1  0
 13 14  1  0
 14 15  1  0
 15 16  1  0
  6 17  1  0
 17 18  1  0
 18 19  1  0
 19 20  1  0
 20 21  2  0
 17  2  1  0
 20  2  1  0
 15  5  1  0
 15  9  1  0
  1 22  1  0
  1 23  1  0
  1 24  1  0
  3 25  1  0
  3 26  1  0
  4 27  1  0
  4 28  1  0
  5 29  1  0
  7 30  1  0
  8 31  1  0
 10 32  1  0
 10 33  1  0
 11 34  1  0
 12 35  1  0
 13 36  1  0
 13 37  1  0
 14 38  1  0
 14 39  1  0
 16 40  1  0
 16 41  1  0
 16 42  1  0
 17 43  1  0
 18 44  1  0
 18 45  1  0
 19 46  1  0
 19 47  1  0
M  END

HEADER    PROTEIN                                 11-SEP-21   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   11-SEP-21         0                                  
HETATM    1  C   UNK     0      -3.801  -1.143   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0      -3.129  -2.529   0.000  0.00  0.00           C+0
HETATM    3  C   UNK     0      -2.136  -1.351   0.000  0.00  0.00           C+0
HETATM    4  C   UNK     0      -0.620  -1.622   0.000  0.00  0.00           C+0
HETATM    5  C   UNK     0      -0.097  -3.071   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0      -1.090  -4.248   0.000  0.00  0.00           C+0
HETATM    7  C   UNK     0      -0.567  -5.696   0.000  0.00  0.00           C+0
HETATM    8  C   UNK     0       0.949  -5.967   0.000  0.00  0.00           C+0
HETATM    9  C   UNK     0       1.942  -4.790   0.000  0.00  0.00           C+0
HETATM   10  C   UNK     0       1.419  -3.342   0.000  0.00  0.00           C+0
HETATM   11  C   UNK     0       2.412  -2.164   0.000  0.00  0.00           C+0
HETATM   12  C   UNK     0       3.928  -2.436   0.000  0.00  0.00           C+0
HETATM   13  C   UNK     0       4.451  -3.884   0.000  0.00  0.00           C+0
HETATM   14  C   UNK     0       3.458  -5.061   0.000  0.00  0.00           C+0
HETATM   15  O   UNK     0       5.967  -4.155   0.000  0.00  0.00           O+0
HETATM   16  C   UNK     0       0.896  -1.893   0.000  0.00  0.00           C+0
HETATM   17  C   UNK     0      -2.606  -3.977   0.000  0.00  0.00           C+0
HETATM   18  C   UNK     0      -3.822  -4.922   0.000  0.00  0.00           C+0
HETATM   19  C   UNK     0      -5.096  -4.058   0.000  0.00  0.00           C+0
HETATM   20  C   UNK     0      -4.668  -2.579   0.000  0.00  0.00           C+0
HETATM   21  O   UNK     0      -5.613  -1.363   0.000  0.00  0.00           O+0
CONECT    1    2                                                            
CONECT    2    1    3   17   20                                             
CONECT    3    2    4                                                       
CONECT    4    3    5                                                       
CONECT    5    4    6   10                                                  
CONECT    6    5    7   17                                                  
CONECT    7    6    8                                                       
CONECT    8    7    9                                                       
CONECT    9    8   10   14                                                  
CONECT   10    9    5   11   16                                             
CONECT   11   10   12                                                       
CONECT   12   11   13                                                       
CONECT   13   12   14   15                                                  
CONECT   14   13    9                                                       
CONECT   15   13                                                            
CONECT   16   10                                                            
CONECT   17    6    2   18                                                  
CONECT   18   17   19                                                       
CONECT   19   18   20                                                       
CONECT   20   19    2   21                                                  
CONECT   21   20                                                            
MASTER        0    0    0    0    0    0    0    0   21    0   48    0
END

COMPND    HMDB0245889
HETATM    1  C1  UNL     1      -3.500   1.152  -1.142  1.00  0.00           C  
HETATM    2  C2  UNL     1      -2.983   0.226  -0.066  1.00  0.00           C  
HETATM    3  C3  UNL     1      -2.244   1.072   0.947  1.00  0.00           C  
HETATM    4  C4  UNL     1      -0.920   1.502   0.300  1.00  0.00           C  
HETATM    5  C5  UNL     1      -0.077   0.205   0.273  1.00  0.00           C  
HETATM    6  C6  UNL     1      -0.725  -0.650  -0.721  1.00  0.00           C  
HETATM    7  C7  UNL     1      -0.087  -1.231  -1.730  1.00  0.00           C  
HETATM    8  C8  UNL     1       1.344  -0.973  -1.816  1.00  0.00           C  
HETATM    9  C9  UNL     1       1.995  -0.218  -0.979  1.00  0.00           C  
HETATM   10  C10 UNL     1       3.488  -0.074  -1.222  1.00  0.00           C  
HETATM   11  C11 UNL     1       4.199  -0.005   0.114  1.00  0.00           C  
HETATM   12  O1  UNL     1       5.360  -0.806   0.033  1.00  0.00           O  
HETATM   13  C12 UNL     1       3.334  -0.623   1.170  1.00  0.00           C  
HETATM   14  C13 UNL     1       2.077   0.184   1.443  1.00  0.00           C  
HETATM   15  C14 UNL     1       1.355   0.493   0.123  1.00  0.00           C  
HETATM   16  C15 UNL     1       1.595   2.007  -0.102  1.00  0.00           C  
HETATM   17  C16 UNL     1      -2.182  -0.905  -0.602  1.00  0.00           C  
HETATM   18  C17 UNL     1      -2.334  -1.978   0.479  1.00  0.00           C  
HETATM   19  C18 UNL     1      -3.593  -1.660   1.223  1.00  0.00           C  
HETATM   20  C19 UNL     1      -4.133  -0.456   0.561  1.00  0.00           C  
HETATM   21  O2  UNL     1      -5.286  -0.114   0.547  1.00  0.00           O  
HETATM   22  H1  UNL     1      -3.882   2.058  -0.631  1.00  0.00           H  
HETATM   23  H2  UNL     1      -2.748   1.448  -1.870  1.00  0.00           H  
HETATM   24  H3  UNL     1      -4.352   0.714  -1.700  1.00  0.00           H  
HETATM   25  H4  UNL     1      -1.953   0.441   1.811  1.00  0.00           H  
HETATM   26  H5  UNL     1      -2.872   1.919   1.213  1.00  0.00           H  
HETATM   27  H6  UNL     1      -0.427   2.305   0.847  1.00  0.00           H  
HETATM   28  H7  UNL     1      -1.070   1.781  -0.753  1.00  0.00           H  
HETATM   29  H8  UNL     1      -0.248  -0.209   1.320  1.00  0.00           H  
HETATM   30  H9  UNL     1      -0.629  -1.849  -2.422  1.00  0.00           H  
HETATM   31  H10 UNL     1       1.876  -1.468  -2.660  1.00  0.00           H  
HETATM   32  H11 UNL     1       3.618   0.871  -1.759  1.00  0.00           H  
HETATM   33  H12 UNL     1       3.844  -0.959  -1.768  1.00  0.00           H  
HETATM   34  H13 UNL     1       4.453   1.026   0.411  1.00  0.00           H  
HETATM   35  H14 UNL     1       5.988  -0.446  -0.657  1.00  0.00           H  
HETATM   36  H15 UNL     1       3.072  -1.673   0.942  1.00  0.00           H  
HETATM   37  H16 UNL     1       3.926  -0.578   2.131  1.00  0.00           H  
HETATM   38  H17 UNL     1       2.345   1.098   1.994  1.00  0.00           H  
HETATM   39  H18 UNL     1       1.439  -0.433   2.109  1.00  0.00           H  
HETATM   40  H19 UNL     1       1.598   2.532   0.885  1.00  0.00           H  
HETATM   41  H20 UNL     1       0.836   2.438  -0.761  1.00  0.00           H  
HETATM   42  H21 UNL     1       2.583   2.099  -0.564  1.00  0.00           H  
HETATM   43  H22 UNL     1      -2.578  -1.253  -1.564  1.00  0.00           H  
HETATM   44  H23 UNL     1      -2.363  -2.998   0.008  1.00  0.00           H  
HETATM   45  H24 UNL     1      -1.445  -1.992   1.151  1.00  0.00           H  
HETATM   46  H25 UNL     1      -4.267  -2.536   1.151  1.00  0.00           H  
HETATM   47  H26 UNL     1      -3.429  -1.484   2.305  1.00  0.00           H  
CONECT    1    2   22   23   24
CONECT    2    3   17   20
CONECT    3    4   25   26
CONECT    4    5   27   28
CONECT    5    6   15   29
CONECT    6    7    7   17
CONECT    7    8   30
CONECT    8    9    9   31
CONECT    9   10   15
CONECT   10   11   32   33
CONECT   11   12   13   34
CONECT   12   35
CONECT   13   14   36   37
CONECT   14   15   38   39
CONECT   15   16
CONECT   16   40   41   42
CONECT   17   18   43
CONECT   18   19   44   45
CONECT   19   20   46   47
CONECT   20   21   21
END

HMDB0245889
     RDKit          3D
3beta-Hydroxy-5,7-androstadien-17-one
 47 50  0  0  0  0  0  0  0  0999 V2000
   -3.4995    1.1516   -1.1425 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.9831    0.2261   -0.0664 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2443    1.0721    0.9467 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9199    1.5022    0.2997 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0771    0.2046    0.2728 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7255   -0.6498   -0.7209 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0867   -1.2311   -1.7301 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.3443   -0.9731   -1.8162 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.9951   -0.2184   -0.9793 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.4883   -0.0736   -1.2223 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.1991   -0.0050    0.1139 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.3603   -0.8060    0.0330 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.3338   -0.6228    1.1699 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.0770    0.1838    1.4429 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.3553    0.4929    0.1231 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.5951    2.0067   -0.1021 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1822   -0.9049   -0.6023 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3336   -1.9784    0.4795 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.5933   -1.6604    1.2225 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.1326   -0.4559    0.5609 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.2857   -0.1140    0.5468 O   0  0  0  0  0  0  0  0  0  0  0  0
   -3.8819    2.0585   -0.6305 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7478    1.4483   -1.8701 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.3517    0.7141   -1.6998 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9528    0.4409    1.8115 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8717    1.9193    1.2129 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4269    2.3045    0.8470 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0704    1.7810   -0.7526 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2476   -0.2091    1.3205 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6288   -1.8486   -2.4220 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.8757   -1.4679   -2.6599 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.6177    0.8715   -1.7592 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.8439   -0.9590   -1.7683 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.4528    1.0262    0.4108 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.9876   -0.4461   -0.6566 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.0716   -1.6726    0.9424 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.9259   -0.5776    2.1310 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.3453    1.0977    1.9937 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.4394   -0.4326    2.1094 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.5979    2.5319    0.8854 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.8365    2.4378   -0.7615 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.5826    2.0993   -0.5641 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5785   -1.2532   -1.5645 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3628   -2.9984    0.0077 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4446   -1.9921    1.1506 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.2675   -2.5362    1.1511 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.4287   -1.4841    2.3054 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  1  0
  3  4  1  0
  4  5  1  0
  5  6  1  0
  6  7  2  0
  7  8  1  0
  8  9  2  0
  9 10  1  0
 10 11  1  0
 11 12  1  0
 11 13  1  0
 13 14  1  0
 14 15  1  0
 15 16  1  0
  6 17  1  0
 17 18  1  0
 18 19  1  0
 19 20  1  0
 20 21  2  0
 17  2  1  0
 20  2  1  0
 15  5  1  0
 15  9  1  0
  1 22  1  0
  1 23  1  0
  1 24  1  0
  3 25  1  0
  3 26  1  0
  4 27  1  0
  4 28  1  0
  5 29  1  0
  7 30  1  0
  8 31  1  0
 10 32  1  0
 10 33  1  0
 11 34  1  0
 12 35  1  0
 13 36  1  0
 13 37  1  0
 14 38  1  0
 14 39  1  0
 16 40  1  0
 16 41  1  0
 16 42  1  0
 17 43  1  0
 18 44  1  0
 18 45  1  0
 19 46  1  0
 19 47  1  0
M  END

View in JSmol View Stereo Labels

Synonyms

Value	Source
3b-Hydroxy-5,7-androstadien-17-one	Generator
3Β-hydroxy-5,7-androstadien-17-one	Generator
3 beta-Hydroxy-5,7-androstadien-17-one	MeSH
3-BHADO	MeSH
3 beta-Hydroxyandrosta-5,7-dien-17-one	MeSH
3-Hydroxyandrosta-5,7-dien-17-one	MeSH

Chemical Formula

C₁₉H₂₆O₂

Average Molecular Weight

286.415

Monoisotopic Molecular Weight

286.193280077

IUPAC Name

5-hydroxy-2,15-dimethyltetracyclo[8.7.0.0^{2,7}.0^{11,15}]heptadeca-7,9-dien-14-one

Traditional Name

5-hydroxy-2,15-dimethyltetracyclo[8.7.0.0^{2,7}.0^{11,15}]heptadeca-7,9-dien-14-one

CAS Registry Number

Not Available

SMILES

CC12CCC3C(=CC=C4CC(O)CCC34C)C1CCC2=O

InChI Identifier

InChI=1S/C19H26O2/c1-18-9-7-13(20)11-12(18)3-4-14-15-5-6-17(21)19(15,2)10-8-16(14)18/h3-4,13,15-16,20H,5-11H2,1-2H3

InChI Key

QKVSSSWYCZWEQM-UHFFFAOYSA-N

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as androgens and derivatives. These are 3-hydroxylated C19 steroid hormones. They are known to favor the development of masculine characteristics. They also show profound effects on scalp and body hair in humans.

Kingdom

Organic compounds

Super Class

Lipids and lipid-like molecules

Class

Steroids and steroid derivatives

Sub Class

Androstane steroids

Direct Parent

Androgens and derivatives

Alternative Parents

Substituents

Androgen-skeleton
3-hydroxy-delta-5-steroid
3-hydroxy-delta-7-steroid
3-hydroxysteroid
Oxosteroid
17-oxosteroid
Hydroxysteroid
Delta-5-steroid
Delta-7-steroid
Cyclic alcohol
Secondary alcohol
Ketone
Organic oxide
Organic oxygen compound
Carbonyl group
Alcohol
Hydrocarbon derivative
Organooxygen compound
Aliphatic homopolycyclic compound

Molecular Framework

Aliphatic homopolycyclic compounds

External Descriptors

Not Available

Ontology

Physiological effect

Not Available

Disposition

Biological location

Non-excretory biofluid

Biofluid or Excreta

Blood (PMID: 31557052)

Source

Exogenous

Exogenous (PMID: 31557052)

Process

Not Available

Role

Not Available

Physical Properties

State

Not Available

Experimental Molecular Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Experimental Chromatographic Properties

Not Available

Predicted Molecular Properties

Property	Value	Source
logP	3.8	ALOGPS
logP	2.96	ChemAxon
logS	-3.9	ALOGPS
pKa (Strongest Acidic)	18.27	ChemAxon
pKa (Strongest Basic)	-1.4	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	2	ChemAxon
Hydrogen Donor Count	1	ChemAxon
Polar Surface Area	37.3 Å²	ChemAxon
Rotatable Bond Count	0	ChemAxon
Refractivity	85.51 m³·mol⁻¹	ChemAxon
Polarizability	33.1 Å³	ChemAxon
Number of Rings	4	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	Yes	ChemAxon
Ghose Filter	Yes	ChemAxon
Veber's Rule	Yes	ChemAxon
MDDR-like Rule	No	ChemAxon

Predicted Chromatographic Properties

Predicted Collision Cross Sections

Predictor	Adduct Type	CCS Value (Å²)	Reference
DeepCCS	[M-2H]-	202.974	30932474
DeepCCS	[M+Na]+	178.539	30932474
AllCCS	[M+H]+	173.5	32859911
AllCCS	[M+H-H2O]+	170.3	32859911
AllCCS	[M+NH4]+	176.5	32859911
AllCCS	[M+Na]+	177.4	32859911
AllCCS	[M-H]-	178.0	32859911
AllCCS	[M+Na-2H]-	178.0	32859911
AllCCS	[M+HCOO]-	178.1	32859911

Predicted Kovats Retention Indices

Derivatized

Derivative Name / Structure	SMILES	Kovats RI Value	Column Type	Reference
3beta-Hydroxy-5,7-androstadien-17-one,1TMS,isomer #1	CC12CCC3C(=CC=C4CC(O[Si](C)(C)C)CCC43C)C1CCC2=O	2656.8	Semi standard non polar	33892256
3beta-Hydroxy-5,7-androstadien-17-one,1TMS,isomer #1	CC12CCC3C(=CC=C4CC(O[Si](C)(C)C)CCC43C)C1CCC2=O	2586.9	Standard non polar	33892256
3beta-Hydroxy-5,7-androstadien-17-one,1TMS,isomer #1	CC12CCC3C(=CC=C4CC(O[Si](C)(C)C)CCC43C)C1CCC2=O	3029.4	Standard polar	33892256
3beta-Hydroxy-5,7-androstadien-17-one,1TMS,isomer #2	CC12CCC(O)CC1=CC=C1C2CCC2(C)C(O[Si](C)(C)C)=CCC12	2639.9	Semi standard non polar	33892256
3beta-Hydroxy-5,7-androstadien-17-one,1TMS,isomer #2	CC12CCC(O)CC1=CC=C1C2CCC2(C)C(O[Si](C)(C)C)=CCC12	2402.4	Standard non polar	33892256
3beta-Hydroxy-5,7-androstadien-17-one,1TMS,isomer #2	CC12CCC(O)CC1=CC=C1C2CCC2(C)C(O[Si](C)(C)C)=CCC12	2926.9	Standard polar	33892256
3beta-Hydroxy-5,7-androstadien-17-one,2TMS,isomer #1	CC12CCC(O[Si](C)(C)C)CC1=CC=C1C2CCC2(C)C(O[Si](C)(C)C)=CCC12	2672.4	Semi standard non polar	33892256
3beta-Hydroxy-5,7-androstadien-17-one,2TMS,isomer #1	CC12CCC(O[Si](C)(C)C)CC1=CC=C1C2CCC2(C)C(O[Si](C)(C)C)=CCC12	2532.5	Standard non polar	33892256
3beta-Hydroxy-5,7-androstadien-17-one,2TMS,isomer #1	CC12CCC(O[Si](C)(C)C)CC1=CC=C1C2CCC2(C)C(O[Si](C)(C)C)=CCC12	2988.1	Standard polar	33892256
3beta-Hydroxy-5,7-androstadien-17-one,1TBDMS,isomer #1	CC12CCC3C(=CC=C4CC(O[Si](C)(C)C(C)(C)C)CCC43C)C1CCC2=O	2927.4	Semi standard non polar	33892256
3beta-Hydroxy-5,7-androstadien-17-one,1TBDMS,isomer #1	CC12CCC3C(=CC=C4CC(O[Si](C)(C)C(C)(C)C)CCC43C)C1CCC2=O	2898.9	Standard non polar	33892256
3beta-Hydroxy-5,7-androstadien-17-one,1TBDMS,isomer #1	CC12CCC3C(=CC=C4CC(O[Si](C)(C)C(C)(C)C)CCC43C)C1CCC2=O	3204.6	Standard polar	33892256
3beta-Hydroxy-5,7-androstadien-17-one,1TBDMS,isomer #2	CC12CCC(O)CC1=CC=C1C2CCC2(C)C(O[Si](C)(C)C(C)(C)C)=CCC12	2911.3	Semi standard non polar	33892256
3beta-Hydroxy-5,7-androstadien-17-one,1TBDMS,isomer #2	CC12CCC(O)CC1=CC=C1C2CCC2(C)C(O[Si](C)(C)C(C)(C)C)=CCC12	2596.1	Standard non polar	33892256
3beta-Hydroxy-5,7-androstadien-17-one,1TBDMS,isomer #2	CC12CCC(O)CC1=CC=C1C2CCC2(C)C(O[Si](C)(C)C(C)(C)C)=CCC12	3103.4	Standard polar	33892256
3beta-Hydroxy-5,7-androstadien-17-one,2TBDMS,isomer #1	CC12CCC(O[Si](C)(C)C(C)(C)C)CC1=CC=C1C2CCC2(C)C(O[Si](C)(C)C(C)(C)C)=CCC12	3180.7	Semi standard non polar	33892256
3beta-Hydroxy-5,7-androstadien-17-one,2TBDMS,isomer #1	CC12CCC(O[Si](C)(C)C(C)(C)C)CC1=CC=C1C2CCC2(C)C(O[Si](C)(C)C(C)(C)C)=CCC12	2914.6	Standard non polar	33892256
3beta-Hydroxy-5,7-androstadien-17-one,2TBDMS,isomer #1	CC12CCC(O[Si](C)(C)C(C)(C)C)CC1=CC=C1C2CCC2(C)C(O[Si](C)(C)C(C)(C)C)=CCC12	3259.4	Standard polar	33892256

Spectra

GC-MS Spectra

Spectrum Type	Description	Splash Key	Deposition Date	Source	View
Predicted GC-MS	Predicted GC-MS Spectrum - 3beta-Hydroxy-5,7-androstadien-17-one GC-MS (Non-derivatized) - 70eV, Positive	splash10-05iu-0290000000-78819f65bf25ed50c80a	2021-09-23	Wishart Lab	View Spectrum
Predicted GC-MS	Predicted GC-MS Spectrum - 3beta-Hydroxy-5,7-androstadien-17-one GC-MS (Non-derivatized) - 70eV, Positive	Not Available	2021-10-12	Wishart Lab	View Spectrum
Predicted GC-MS	Predicted GC-MS Spectrum - 3beta-Hydroxy-5,7-androstadien-17-one GC-MS (Non-derivatized) - 70eV, Positive	Not Available	2021-10-12	Wishart Lab	View Spectrum

MS/MS Spectra

Spectrum Type	Description	Splash Key	Deposition Date	Source	View
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 3beta-Hydroxy-5,7-androstadien-17-one 10V, Positive-QTOF	splash10-00kr-0090000000-f6b97fd68c1c35b7fc95	2021-10-12	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 3beta-Hydroxy-5,7-androstadien-17-one 20V, Positive-QTOF	splash10-0udi-0490000000-08757f8faac0e7653b48	2021-10-12	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 3beta-Hydroxy-5,7-androstadien-17-one 40V, Positive-QTOF	splash10-054p-6920000000-814d7845b1b791dd82d7	2021-10-12	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 3beta-Hydroxy-5,7-androstadien-17-one 10V, Negative-QTOF	splash10-000i-0090000000-69c80a26e4f51bb27abb	2021-10-12	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 3beta-Hydroxy-5,7-androstadien-17-one 20V, Negative-QTOF	splash10-000i-0090000000-abba0a8f25b7adc2a9e9	2021-10-12	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 3beta-Hydroxy-5,7-androstadien-17-one 40V, Negative-QTOF	splash10-001i-0090000000-b8b9c17d468a103439d8	2021-10-12	Wishart Lab	View Spectrum

Biological Properties

Cellular Locations

Not Available

Biospecimen Locations

Blood

Tissue Locations

Not Available

Pathways

Not Available

Name	SMPDB/PathBank	KEGG

Normal Concentrations

Biospecimen	Status	Value	Age	Sex	Condition	Reference	Details
Blood	Detected but not Quantified	Not Quantified	Not Specified	Not Specified	Normal	31557052	details

Abnormal Concentrations

Not Available

Associated Disorders and Diseases

Disease References

None

Associated OMIM IDs

None

External Links

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FooDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

243424

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

276591

PDB ID

Not Available

ChEBI ID

Not Available

Food Biomarker Ontology

Not Available

VMH ID

Not Available

MarkerDB ID

Not Available

Good Scents ID

Not Available

References

Synthesis Reference

Not Available

Material Safety Data Sheet (MSDS)

Not Available

General References

Barupal DK, Fiehn O: Generating the Blood Exposome Database Using a Comprehensive Text Mining and Database Fusion Approach. Environ Health Perspect. 2019 Sep;127(9):97008. doi: 10.1289/EHP4713. Epub 2019 Sep 26. [PubMed:31557052 ]

Showing metabocard for 3beta-Hydroxy-5,7-androstadien-17-one (HMDB0245889)

MOL for HMDB0245889 (3beta-Hydroxy-5,7-androstadien-17-one)

3D MOL for HMDB0245889 (3beta-Hydroxy-5,7-androstadien-17-one)

3D SDF for HMDB0245889 (3beta-Hydroxy-5,7-androstadien-17-one)

3D-SDF for HMDB0245889 (3beta-Hydroxy-5,7-androstadien-17-one)

PDB for HMDB0245889 (3beta-Hydroxy-5,7-androstadien-17-one)

3D PDB for HMDB0245889 (3beta-Hydroxy-5,7-androstadien-17-one)

SMILES for HMDB0245889 (3beta-Hydroxy-5,7-androstadien-17-one)

INCHI for HMDB0245889 (3beta-Hydroxy-5,7-androstadien-17-one)

Structure for HMDB0245889 (3beta-Hydroxy-5,7-androstadien-17-one)

3D Structure for HMDB0245889 (3beta-Hydroxy-5,7-androstadien-17-one)

Predicted Collision Cross Sections

Predicted Kovats Retention Indices

Derivatized

GC-MS Spectra

MS/MS Spectra