Hmdb loader
Record Information
Version5.0
StatusDetected but not Quantified
Creation Date2021-09-10 23:50:54 UTC
Update Date2021-09-26 22:56:09 UTC
HMDB IDHMDB0246835
Secondary Accession NumbersNone
Metabolite Identification
Common Name5-Oxo-6,8,11,14-eicosatetraenoic acid
Description5-Oxo-6,8,11,14-eicosatetraenoic acid, also known as 5-KETE or 5-oxo-6,8,11,14-ete, belongs to the class of organic compounds known as long-chain fatty acids. These are fatty acids with an aliphatic tail that contains between 13 and 21 carbon atoms. Based on a literature review very few articles have been published on 5-Oxo-6,8,11,14-eicosatetraenoic acid. This compound has been identified in human blood as reported by (PMID: 31557052 ). 5-oxo-6,8,11,14-eicosatetraenoic acid is not a naturally occurring metabolite and is only found in those individuals exposed to this compound or its derivatives. Technically 5-Oxo-6,8,11,14-eicosatetraenoic acid is part of the human exposome. The exposome can be defined as the collection of all the exposures of an individual in a lifetime and how those exposures relate to health. An individual's exposure begins before birth and includes insults from environmental and occupational sources.
Structure
Thumb
Synonyms
ValueSource
5-oxo-6,8,11,14-EicosatetraenoateGenerator
5-KETEHMDB
5-Keto-6,8,11,14-eicosatetraenoic acidHMDB
5-oxo-6,8,11,14-ETEHMDB
5-oxo-6,8,11,14-Eicosatetraenoic acid, e,Z,Z,Z isomerHMDB
5-oxo-EicosatetraenoateHMDB
Chemical FormulaC20H30O3
Average Molecular Weight318.457
Monoisotopic Molecular Weight318.219494826
IUPAC Name5-oxoicosa-6,8,11,14-tetraenoic acid
Traditional Name5-oxoicosa-6,8,11,14-tetraenoic acid
CAS Registry NumberNot Available
SMILES
CCCCCC=CCC=CCC=CC=CC(=O)CCCC(O)=O
InChI Identifier
InChI=1S/C20H30O3/c1-2-3-4-5-6-7-8-9-10-11-12-13-14-16-19(21)17-15-18-20(22)23/h6-7,9-10,12-14,16H,2-5,8,11,15,17-18H2,1H3,(H,22,23)
InChI KeyMEASLHGILYBXFO-UHFFFAOYSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as long-chain fatty acids. These are fatty acids with an aliphatic tail that contains between 13 and 21 carbon atoms.
KingdomOrganic compounds
Super ClassLipids and lipid-like molecules
ClassFatty Acyls
Sub ClassFatty acids and conjugates
Direct ParentLong-chain fatty acids
Alternative Parents
Substituents
  • Long-chain fatty acid
  • Unsaturated fatty acid
  • Alpha,beta-unsaturated ketone
  • Enone
  • Acryloyl-group
  • Ketone
  • Monocarboxylic acid or derivatives
  • Carboxylic acid
  • Carboxylic acid derivative
  • Organic oxygen compound
  • Organic oxide
  • Hydrocarbon derivative
  • Organooxygen compound
  • Carbonyl group
  • Aliphatic acyclic compound
Molecular FrameworkAliphatic acyclic compounds
External DescriptorsNot Available
Ontology
Physiological effectNot Available
Disposition
ProcessNot Available
RoleNot Available
Physical Properties
StateNot Available
Experimental Molecular Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
logP5.85ALOGPS
logP5.77ChemAxon
logS-5.7ALOGPS
pKa (Strongest Acidic)4.43ChemAxon
pKa (Strongest Basic)-4.6ChemAxon
Physiological Charge-1ChemAxon
Hydrogen Acceptor Count3ChemAxon
Hydrogen Donor Count1ChemAxon
Polar Surface Area54.37 ŲChemAxon
Rotatable Bond Count14ChemAxon
Refractivity100.57 m³·mol⁻¹ChemAxon
Polarizability37.68 ųChemAxon
Number of Rings0ChemAxon
BioavailabilityNoChemAxon
Rule of FiveNoChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DeepCCS[M+H]+177.06930932474
DeepCCS[M-H]-174.71130932474
DeepCCS[M-2H]-207.59630932474
DeepCCS[M+Na]+183.16230932474
AllCCS[M+H]+185.232859911
AllCCS[M+H-H2O]+182.332859911
AllCCS[M+NH4]+187.932859911
AllCCS[M+Na]+188.732859911
AllCCS[M-H]-184.932859911
AllCCS[M+Na-2H]-186.632859911
AllCCS[M+HCOO]-188.732859911

Predicted Kovats Retention Indices

Underivatized

MetaboliteSMILESKovats RI ValueColumn TypeReference
5-Oxo-6,8,11,14-eicosatetraenoic acidCCCCCC=CCC=CCC=CC=CC(=O)CCCC(O)=O4190.3Standard polar33892256
5-Oxo-6,8,11,14-eicosatetraenoic acidCCCCCC=CCC=CCC=CC=CC(=O)CCCC(O)=O2347.7Standard non polar33892256
5-Oxo-6,8,11,14-eicosatetraenoic acidCCCCCC=CCC=CCC=CC=CC(=O)CCCC(O)=O2642.1Semi standard non polar33892256

Derivatized

Derivative Name / StructureSMILESKovats RI ValueColumn TypeReference
5-Oxo-6,8,11,14-eicosatetraenoic acid,2TMS,isomer #1CCCCCC=CCC=CCC=CC=CC(=CCCC(=O)O[Si](C)(C)C)O[Si](C)(C)C2800.1Semi standard non polar33892256
5-Oxo-6,8,11,14-eicosatetraenoic acid,2TMS,isomer #1CCCCCC=CCC=CCC=CC=CC(=CCCC(=O)O[Si](C)(C)C)O[Si](C)(C)C2710.0Standard non polar33892256
5-Oxo-6,8,11,14-eicosatetraenoic acid,2TMS,isomer #1CCCCCC=CCC=CCC=CC=CC(=CCCC(=O)O[Si](C)(C)C)O[Si](C)(C)C2848.1Standard polar33892256
5-Oxo-6,8,11,14-eicosatetraenoic acid,2TBDMS,isomer #1CCCCCC=CCC=CCC=CC=CC(=CCCC(=O)O[Si](C)(C)C(C)(C)C)O[Si](C)(C)C(C)(C)C3271.6Semi standard non polar33892256
5-Oxo-6,8,11,14-eicosatetraenoic acid,2TBDMS,isomer #1CCCCCC=CCC=CCC=CC=CC(=CCCC(=O)O[Si](C)(C)C(C)(C)C)O[Si](C)(C)C(C)(C)C3098.3Standard non polar33892256
5-Oxo-6,8,11,14-eicosatetraenoic acid,2TBDMS,isomer #1CCCCCC=CCC=CCC=CC=CC(=CCCC(=O)O[Si](C)(C)C(C)(C)C)O[Si](C)(C)C(C)(C)C2931.7Standard polar33892256
Spectra

GC-MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted GC-MSPredicted GC-MS Spectrum - 5-Oxo-6,8,11,14-eicosatetraenoic acid GC-MS (Non-derivatized) - 70eV, Positivesplash10-053u-6490000000-f7442bdfafe15fcbd8be2021-09-23Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - 5-Oxo-6,8,11,14-eicosatetraenoic acid GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - 5-Oxo-6,8,11,14-eicosatetraenoic acid GC-MS (TMS_1_1) - 70eV, PositiveNot Available2021-11-03Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - 5-Oxo-6,8,11,14-eicosatetraenoic acid GC-MS (TMS_1_2) - 70eV, PositiveNot Available2021-11-03Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - 5-Oxo-6,8,11,14-eicosatetraenoic acid GC-MS (TBDMS_1_1) - 70eV, PositiveNot Available2021-11-03Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - 5-Oxo-6,8,11,14-eicosatetraenoic acid GC-MS (TBDMS_1_2) - 70eV, PositiveNot Available2021-11-03Wishart LabView Spectrum

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 5-Oxo-6,8,11,14-eicosatetraenoic acid 10V, Positive-QTOFsplash10-0uxr-1429000000-93c87db70de8a9509a342021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 5-Oxo-6,8,11,14-eicosatetraenoic acid 20V, Positive-QTOFsplash10-0f89-5944000000-fd1af71047782189494e2021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 5-Oxo-6,8,11,14-eicosatetraenoic acid 40V, Positive-QTOFsplash10-00lu-9700000000-cde9bfbce3fdd2d8c1b02021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 5-Oxo-6,8,11,14-eicosatetraenoic acid 10V, Negative-QTOFsplash10-014i-0009000000-ac8d7382f0841f88fc4e2021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 5-Oxo-6,8,11,14-eicosatetraenoic acid 20V, Negative-QTOFsplash10-014i-6297000000-e0af38c59ea85e00eaac2021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 5-Oxo-6,8,11,14-eicosatetraenoic acid 40V, Negative-QTOFsplash10-052f-9580000000-e2e6654123cbfb72d9022021-10-12Wishart LabView Spectrum
Biological Properties
Cellular LocationsNot Available
Biospecimen Locations
  • Blood
Tissue LocationsNot Available
Pathways
Normal Concentrations
BiospecimenStatusValueAgeSexConditionReferenceDetails
BloodDetected but not QuantifiedNot QuantifiedNot SpecifiedNot SpecifiedNormal details
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDNot Available
KNApSAcK IDNot Available
Chemspider ID1765
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound1831
PDB IDNot Available
ChEBI IDNot Available
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDNot Available
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General References
  1. Barupal DK, Fiehn O: Generating the Blood Exposome Database Using a Comprehensive Text Mining and Database Fusion Approach. Environ Health Perspect. 2019 Sep;127(9):97008. doi: 10.1289/EHP4713. Epub 2019 Sep 26. [PubMed:31557052 ]