Hmdb loader

Showing metabocard for Amphotericin B methyl ester (HMDB0248359)

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Record Information
Version5.0
StatusDetected but not Quantified
Creation Date2021-09-11 01:39:36 UTC
Update Date2022-11-24 00:09:12 UTC
HMDB IDHMDB0248359
Secondary Accession NumbersNone
Metabolite Identification
Common NameAmphotericin B methyl ester
DescriptionAmphotericin B methyl ester belongs to the class of organic compounds known as aminoglycosides. These are molecules or a portion of a molecule composed of amino-modified sugars. Based on a literature review very few articles have been published on Amphotericin B methyl ester. This compound has been identified in human blood as reported by (PMID: 31557052 ). Amphotericin b methyl ester is not a naturally occurring metabolite and is only found in those individuals exposed to this compound or its derivatives. Technically Amphotericin B methyl ester is part of the human exposome. The exposome can be defined as the collection of all the exposures of an individual in a lifetime and how those exposures relate to health. An individual's exposure begins before birth and includes insults from environmental and occupational sources.
Structure
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MOL3D MOLSDF3D SDFPDB3D PDBSMILESInChI

MOL for HMDB0248359 (Amphotericin B methyl ester)

  Mrv1652309112103392D          

 66 68  0  0  0  0            999 V2000
   23.7369   -1.4223    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   22.9783   -1.0980    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   22.8798   -0.2789    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   22.1212    0.0453    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   22.0226    0.8644    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   21.2640    1.1886    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   20.6039    0.6937    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   19.8453    1.0180    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   19.1852    0.5231    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   18.4266    0.8473    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   17.7665    0.3525    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   17.0079    0.6767    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   16.3478    0.1818    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   15.5892    0.5060    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   14.9291    0.0112    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   14.1704    0.3354    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   13.5103   -0.1595    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   12.7517    0.1647    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   12.0916   -0.3301    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   11.3330   -0.0059    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   10.6729   -0.5008    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   10.7714   -1.3199    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   11.5301   -1.6441    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   12.1902   -1.1492    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   11.6286   -2.4632    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   12.3872   -2.7874    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
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   13.8059   -2.6168    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
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   15.2246   -2.4461    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
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   16.6433   -2.2755    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   17.3034   -1.7806    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   18.0621   -2.1048    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   18.7222   -1.6100    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   19.4808   -1.9342    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   19.5793   -2.7533    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   20.1409   -1.4393    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   20.8995   -1.7635    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   21.5596   -1.2687    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   22.3182   -1.5929    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   22.4167   -2.4120    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   21.4611   -0.4496    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   20.9980   -2.5826    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   18.1606   -2.9239    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   16.7419   -3.0946    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   14.3675   -1.3028    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   13.9044   -3.4359    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   12.4857   -3.6065    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   10.8700   -2.1390    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    9.9143   -0.1765    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   11.2345    0.8132    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   11.8946    1.3081    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   10.4759    1.1374    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   10.3774    1.9565    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   13.4118    0.6596    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   14.0719    1.1545    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   13.9734    1.9736    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   14.6335    2.4684    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   15.3921    2.1442    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   15.4906    1.3251    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   14.8305    0.8303    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   16.2493    1.0009    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   16.0522    2.6391    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   14.5350    3.2875    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
   13.2148    2.2978    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  3  2  1  4  0  0  0
  3  4  2  0  0  0  0
  5  4  1  4  0  0  0
  5  6  2  0  0  0  0
  7  6  1  4  0  0  0
  7  8  2  0  0  0  0
  9  8  1  4  0  0  0
  9 10  2  0  0  0  0
 11 10  1  4  0  0  0
 11 12  2  0  0  0  0
 13 12  1  4  0  0  0
 13 14  2  0  0  0  0
 15 14  1  4  0  0  0
 15 16  2  0  0  0  0
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 17 18  1  0  0  0  0
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 20 21  1  0  0  0  0
 21 22  1  0  0  0  0
 22 23  1  0  0  0  0
 23 24  1  0  0  0  0
 19 24  1  0  0  0  0
 23 25  1  0  0  0  0
 25 26  1  0  0  0  0
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 61 63  1  0  0  0  0
 60 64  1  0  0  0  0
 59 65  1  0  0  0  0
 58 66  1  0  0  0  0
M  END
Download

3D MOL for HMDB0248359 (Amphotericin B methyl ester)

HMDB0248359
     RDKit          3D
AMPHOTERICIN B METHYL ESTER
141143  0  0  0  0  0  0  0  0999 V2000
   -7.5322   -2.4302   -1.6603 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.3621   -2.4788   -0.8499 O   0  0  0  0  0  0  0  0  0  0  0  0
   -6.2680   -1.6863    0.2792 C   0  0  0  0  0  0  0  0  0  0  0  0
   -7.2707   -0.9360    0.5320 O   0  0  0  0  0  0  0  0  0  0  0  0
   -5.0616   -1.7172    1.1397 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.7747   -3.0614    1.7212 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.9825   -3.7593    1.9006 O   0  0  0  0  0  0  0  0  0  0  0  0
   -3.8664   -3.9182    0.8903 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7068   -3.0699    0.4391 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1229   -2.5337    1.5946 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6760   -3.8162   -0.3385 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5734   -5.2702   -0.0239 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7371   -5.9709   -0.3133 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4842   -5.8540   -0.9213 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.6182   -6.4270   -0.0289 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0548   -7.5251    0.6207 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.7351   -6.9299   -0.9144 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.5180   -6.6410   -2.2576 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.0297   -6.3305   -0.4078 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.1029   -4.8593   -0.7984 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.1064   -4.0996    0.0150 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.1271   -4.5326    1.3380 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.4921   -4.1465   -0.5971 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.5567   -3.7564    0.3783 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.7731   -4.2766   -0.0647 O   0  0  0  0  0  0  0  0  0  0  0  0
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    7.4578   -1.6083   -0.4612 C   0  0  0  0  0  0  0  0  0  0  0  0
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    7.6822    2.0212   -0.4027 C   0  0  0  0  0  0  0  0  0  0  0  0
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    8.2262    4.2684    0.0080 O   0  0  0  0  0  0  0  0  0  0  0  0
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    5.1769    3.9783    1.2777 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.0783    3.3288    1.6490 C   0  0  0  0  0  0  0  0  0  0  0  0
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    2.5100    3.7582   -0.2050 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1103    5.1241    0.0552 C   0  0  0  0  0  0  0  0  0  0  0  0
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    0.6975    4.5550    1.9780 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0586    3.4814    1.5196 C   0  0  0  0  0  0  0  0  0  0  0  0
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   -2.9841    2.3638    2.1368 C   0  0  0  0  0  0  0  0  0  0  0  0
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   -4.5107    1.2494    0.4860 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.0924    2.3094   -0.1786 O   0  0  0  0  0  0  0  0  0  0  0  0
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   -7.1812    3.1666   -1.9742 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.9465    2.4545   -3.3153 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.1619    4.2491   -1.8844 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.8802    3.8680   -2.2774 O   0  0  0  0  0  0  0  0  0  0  0  0
   -6.1599    4.9279   -0.5381 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.9763    6.1341   -0.5478 N   0  0  0  0  0  0  0  0  0  0  0  0
   -6.7355    3.9927    0.4729 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.3924    4.3681    1.7699 O   0  0  0  0  0  0  0  0  0  0  0  0
   -4.3083    0.0466   -0.4276 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.8534   -1.1099    0.4454 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.2100   -2.0650   -0.3643 O   0  0  0  0  0  0  0  0  0  0  0  0
   -8.0262   -1.4250   -1.5278 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.2849   -2.6060   -2.7123 H   0  0  0  0  0  0  0  0  0  0  0  0
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   -5.2755   -1.0269    2.0077 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.2908   -2.9791    2.7372 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.7912   -4.5939    2.4200 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.4324   -4.2329   -0.0099 H   0  0  0  0  0  0  0  0  0  0  0  0
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   -1.4731   -3.1976    1.9467 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6582   -3.3712   -0.1920 H   0  0  0  0  0  0  0  0  0  0  0  0
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   -1.2865   -5.3628    1.0503 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.9880   -5.7835   -1.2356 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8428   -6.6741   -1.5464 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0527   -5.0891   -1.5992 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.9402   -5.7101    0.7288 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8101   -7.8030    0.2312 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.8533   -8.0415   -0.8318 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.6868   -5.7062   -2.4828 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.9124   -6.8329   -0.8078 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.9985   -6.3926    0.6994 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.4034   -4.7929   -1.8667 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.0754   -4.4554   -0.6775 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.7865   -3.0272    0.0332 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.6262   -5.3806    1.4543 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.4742   -3.4646   -1.4718 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.7084   -5.1591   -1.0007 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.3611   -4.2150    1.3644 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.7020   -4.7079   -0.9533 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.0191   -2.0605    1.5981 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.5763   -1.8820    0.5854 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.1162    0.8001    0.5333 H   0  0  0  0  0  0  0  0  0  0  0  0
    8.4983    1.3801    1.7986 H   0  0  0  0  0  0  0  0  0  0  0  0
    8.6890   -0.3629    1.2941 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.2882    0.2024    2.3675 H   0  0  0  0  0  0  0  0  0  0  0  0
    8.8086    1.9583   -0.3742 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.6957    2.9203   -2.3603 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.8595    1.1563   -2.3327 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.2424    1.8252   -2.0486 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.4201    3.0750    1.4118 H   0  0  0  0  0  0  0  0  0  0  0  0
    9.1360    3.8434   -0.0624 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.3513    3.0009   -0.6404 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.1708    5.0988   -1.5645 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.0576    5.8985   -0.1487 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.9369    4.9862   -1.4007 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.5780    4.7246    1.9437 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.9173    3.0587    2.7089 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.6628    1.8947    0.7730 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.3849    3.3495   -1.2147 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.4040    5.8964   -0.6450 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.3165    6.5512    1.3477 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.6853    4.7183    3.0687 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.2283    2.5225    2.0410 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6634    2.7167   -0.3988 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9902    4.7838   -0.7394 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.1199    5.7132    1.4036 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.8776    4.1747    2.9969 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5307    1.9355    3.0652 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3309    1.0146    0.7251 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.3120    0.8861    1.2005 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.8141    1.9260    0.9305 H   0  0  0  0  0  0  0  0  0  0  0  0
   -8.1846    3.6466   -2.0891 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.5931    1.5533   -3.3343 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.1667    3.1145   -4.1608 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.8805    2.1068   -3.3137 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.4863    5.0448   -2.6157 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.3547    4.7176   -2.3693 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.1567    5.2336   -0.2178 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.4640    6.9719   -0.2158 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.4882    6.2759   -1.4267 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.8698    4.0743    0.4632 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.7102    3.7535    2.4489 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.4519    0.2891   -1.0923 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.2141   -0.2636   -0.9414 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.1402   -0.8138    1.2142 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  1  0
  3  4  2  0
  3  5  1  0
  5  6  1  0
  6  7  1  0
  6  8  1  0
  8  9  1  0
  9 10  1  0
  9 11  1  0
 11 12  1  0
 12 13  1  0
 12 14  1  0
 14 15  1  0
 15 16  1  0
 15 17  1  0
 17 18  1  0
 17 19  1  0
 19 20  1  0
 20 21  1  0
 21 22  1  0
 21 23  1  0
 23 24  1  0
 24 25  1  0
 24 26  1  0
 26 27  1  0
 27 28  2  0
 27 29  1  0
 29 30  1  0
 30 31  1  0
 30 32  1  0
 32 33  1  0
 32 34  1  0
 34 35  1  0
 34 36  1  0
 36 37  1  0
 36 38  1  0
 38 39  2  0
 39 40  1  0
 40 41  2  0
 41 42  1  0
 42 43  2  0
 43 44  1  0
 44 45  2  0
 45 46  1  0
 46 47  2  0
 47 48  1  0
 48 49  2  0
 49 50  1  0
 50 51  2  0
 51 52  1  0
 52 53  1  0
 53 54  1  0
 54 55  1  0
 55 56  1  0
 56 57  1  0
 56 58  1  0
 58 59  1  0
 58 60  1  0
 60 61  1  0
 60 62  1  0
 62 63  1  0
 52 64  1  0
 64 65  1  0
 65 66  1  0
 65  5  1  0
 66  9  1  0
 62 54  1  0
  1 67  1  0
  1 68  1  0
  1 69  1  0
  5 70  1  0
  6 71  1  0
  7 72  1  0
  8 73  1  0
  8 74  1  0
 10 75  1  0
 11 76  1  0
 11 77  1  0
 12 78  1  0
 13 79  1  0
 14 80  1  0
 14 81  1  0
 15 82  1  0
 16 83  1  0
 17 84  1  0
 18 85  1  0
 19 86  1  0
 19 87  1  0
 20 88  1  0
 20 89  1  0
 21 90  1  0
 22 91  1  0
 23 92  1  0
 23 93  1  0
 24 94  1  0
 25 95  1  0
 26 96  1  0
 26 97  1  0
 30 98  1  0
 31 99  1  0
 31100  1  0
 31101  1  0
 32102  1  0
 33103  1  0
 33104  1  0
 33105  1  0
 34106  1  0
 35107  1  0
 36108  1  0
 37109  1  0
 37110  1  0
 37111  1  0
 38112  1  0
 39113  1  0
 40114  1  0
 41115  1  0
 42116  1  0
 43117  1  0
 44118  1  0
 45119  1  0
 46120  1  0
 47121  1  0
 48122  1  0
 49123  1  0
 50124  1  0
 51125  1  0
 52126  1  0
 54127  1  0
 56128  1  0
 57129  1  0
 57130  1  0
 57131  1  0
 58132  1  0
 59133  1  0
 60134  1  0
 61135  1  0
 61136  1  0
 62137  1  0
 63138  1  0
 64139  1  0
 64140  1  0
 65141  1  0
M  END
Download

3D SDF for HMDB0248359 (Amphotericin B methyl ester)

  Mrv1652309112103392D          

 66 68  0  0  0  0            999 V2000
   23.7369   -1.4223    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   22.9783   -1.0980    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   22.8798   -0.2789    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   22.1212    0.0453    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   22.0226    0.8644    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   21.2640    1.1886    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   20.6039    0.6937    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   19.8453    1.0180    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   19.1852    0.5231    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   18.4266    0.8473    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   17.7665    0.3525    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   17.0079    0.6767    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   16.3478    0.1818    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   15.5892    0.5060    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   14.9291    0.0112    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   14.1704    0.3354    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   13.5103   -0.1595    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   12.7517    0.1647    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   12.0916   -0.3301    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   11.3330   -0.0059    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   10.6729   -0.5008    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   10.7714   -1.3199    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   11.5301   -1.6441    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   12.1902   -1.1492    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   11.6286   -2.4632    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   12.3872   -2.7874    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   13.0473   -2.2925    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   13.8059   -2.6168    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   14.4660   -2.1219    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   15.2246   -2.4461    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   15.8847   -1.9513    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   16.6433   -2.2755    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   17.3034   -1.7806    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   18.0621   -2.1048    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   18.7222   -1.6100    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   19.4808   -1.9342    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   19.5793   -2.7533    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   20.1409   -1.4393    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   20.8995   -1.7635    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   21.5596   -1.2687    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   22.3182   -1.5929    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   22.4167   -2.4120    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   21.4611   -0.4496    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   20.9980   -2.5826    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   18.1606   -2.9239    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   16.7419   -3.0946    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   14.3675   -1.3028    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   13.9044   -3.4359    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   12.4857   -3.6065    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   10.8700   -2.1390    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    9.9143   -0.1765    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   11.2345    0.8132    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   11.8946    1.3081    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   10.4759    1.1374    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   10.3774    1.9565    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   13.4118    0.6596    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   14.0719    1.1545    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   13.9734    1.9736    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   14.6335    2.4684    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   15.3921    2.1442    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   15.4906    1.3251    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   14.8305    0.8303    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   16.2493    1.0009    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   16.0522    2.6391    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   14.5350    3.2875    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
   13.2148    2.2978    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  3  2  1  4  0  0  0
  3  4  2  0  0  0  0
  5  4  1  4  0  0  0
  5  6  2  0  0  0  0
  7  6  1  4  0  0  0
  7  8  2  0  0  0  0
  9  8  1  4  0  0  0
  9 10  2  0  0  0  0
 11 10  1  4  0  0  0
 11 12  2  0  0  0  0
 13 12  1  4  0  0  0
 13 14  2  0  0  0  0
 15 14  1  4  0  0  0
 15 16  2  0  0  0  0
 16 17  1  0  0  0  0
 17 18  1  0  0  0  0
 18 19  1  0  0  0  0
 19 20  1  0  0  0  0
 20 21  1  0  0  0  0
 21 22  1  0  0  0  0
 22 23  1  0  0  0  0
 23 24  1  0  0  0  0
 19 24  1  0  0  0  0
 23 25  1  0  0  0  0
 25 26  1  0  0  0  0
 26 27  1  0  0  0  0
 27 28  1  0  0  0  0
 28 29  1  0  0  0  0
 29 30  1  0  0  0  0
 30 31  1  0  0  0  0
 31 32  1  0  0  0  0
 32 33  1  0  0  0  0
 33 34  1  0  0  0  0
 34 35  1  0  0  0  0
 35 36  1  0  0  0  0
 36 37  2  0  0  0  0
 36 38  1  0  0  0  0
 38 39  1  0  0  0  0
 39 40  1  0  0  0  0
 40 41  1  0  0  0  0
  2 41  1  0  0  0  0
 41 42  1  0  0  0  0
 40 43  1  0  0  0  0
 39 44  1  0  0  0  0
 34 45  1  0  0  0  0
 32 46  1  0  0  0  0
 29 47  1  0  0  0  0
 28 48  1  0  0  0  0
 26 49  1  0  0  0  0
 23 50  1  0  0  0  0
 21 51  1  0  0  0  0
 20 52  1  0  0  0  0
 52 53  2  0  0  0  0
 52 54  1  0  0  0  0
 54 55  1  0  0  0  0
 17 56  1  0  0  0  0
 56 57  1  0  0  0  0
 57 58  1  0  0  0  0
 58 59  1  0  0  0  0
 59 60  1  0  0  0  0
 60 61  1  0  0  0  0
 61 62  1  0  0  0  0
 57 62  1  0  0  0  0
 61 63  1  0  0  0  0
 60 64  1  0  0  0  0
 59 65  1  0  0  0  0
 58 66  1  0  0  0  0
M  END
> <DATABASE_ID>
HMDB0248359

> <DATABASE_NAME>
hmdb

> <SMILES>
COC(=O)C1C(O)CC2(O)CC(O)CC(O)C(O)CCC(O)CC(O)CC(=O)OC(C)C(C)C(O)C(C)C=CC=CC=CC=CC=CC=CC=CC(CC1O2)OC1OC(C)C(O)C(N)C1O

> <INCHI_IDENTIFIER>
InChI=1S/C48H75NO17/c1-28-18-16-14-12-10-8-6-7-9-11-13-15-17-19-35(65-47-45(59)42(49)44(58)31(4)64-47)25-39-41(46(60)62-5)38(55)27-48(61,66-39)26-34(52)23-37(54)36(53)21-20-32(50)22-33(51)24-40(56)63-30(3)29(2)43(28)57/h6-19,28-39,41-45,47,50-55,57-59,61H,20-27,49H2,1-5H3

> <INCHI_KEY>
UAZIZEMIKKIBCA-UHFFFAOYSA-N

> <FORMULA>
C48H75NO17

> <MOLECULAR_WEIGHT>
938.118

> <EXACT_MASS>
937.503499959

> <JCHEM_ACCEPTOR_COUNT>
16

> <JCHEM_ATOM_COUNT>
141

> <JCHEM_AVERAGE_POLARIZABILITY>
100.14026260422834

> <JCHEM_BIOAVAILABILITY>
0

> <JCHEM_DONOR_COUNT>
11

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
0

> <JCHEM_IUPAC>
methyl 33-[(4-amino-3,5-dihydroxy-6-methyloxan-2-yl)oxy]-1,3,5,6,9,11,17,37-octahydroxy-15,16,18-trimethyl-13-oxo-14,39-dioxabicyclo[33.3.1]nonatriaconta-19,21,23,25,27,29,31-heptaene-36-carboxylate

> <ALOGPS_LOGP>
0.37

> <JCHEM_LOGP>
0.10976990666666485

> <ALOGPS_LOGS>
-4.14

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
3

> <JCHEM_PHYSIOLOGICAL_CHARGE>
1

> <JCHEM_PKA>
12.709639020039695

> <JCHEM_PKA_STRONGEST_ACIDIC>
11.823184660718463

> <JCHEM_PKA_STRONGEST_BASIC>
9.113091954422327

> <JCHEM_POLAR_SURFACE_AREA>
308.60999999999996

> <JCHEM_REFRACTIVITY>
249.43960000000013

> <JCHEM_ROTATABLE_BOND_COUNT>
4

> <JCHEM_RULE_OF_FIVE>
0

> <ALOGPS_SOLUBILITY>
6.76e-02 g/l

> <JCHEM_TRADITIONAL_IUPAC>
methyl 33-[(4-amino-3,5-dihydroxy-6-methyloxan-2-yl)oxy]-1,3,5,6,9,11,17,37-octahydroxy-15,16,18-trimethyl-13-oxo-14,39-dioxabicyclo[33.3.1]nonatriaconta-19,21,23,25,27,29,31-heptaene-36-carboxylate

> <JCHEM_VEBER_RULE>
0

$$$$
Download

3D-SDF for HMDB0248359 (Amphotericin B methyl ester)

HMDB0248359
     RDKit          3D
AMPHOTERICIN B METHYL ESTER
141143  0  0  0  0  0  0  0  0999 V2000
   -7.5322   -2.4302   -1.6603 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.3621   -2.4788   -0.8499 O   0  0  0  0  0  0  0  0  0  0  0  0
   -6.2680   -1.6863    0.2792 C   0  0  0  0  0  0  0  0  0  0  0  0
   -7.2707   -0.9360    0.5320 O   0  0  0  0  0  0  0  0  0  0  0  0
   -5.0616   -1.7172    1.1397 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.7747   -3.0614    1.7212 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.9825   -3.7593    1.9006 O   0  0  0  0  0  0  0  0  0  0  0  0
   -3.8664   -3.9182    0.8903 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7068   -3.0699    0.4391 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1229   -2.5337    1.5946 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6760   -3.8162   -0.3385 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5734   -5.2702   -0.0239 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7371   -5.9709   -0.3133 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4842   -5.8540   -0.9213 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.6182   -6.4270   -0.0289 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0548   -7.5251    0.6207 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.7351   -6.9299   -0.9144 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.5180   -6.6410   -2.2576 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.0297   -6.3305   -0.4078 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.1029   -4.8593   -0.7984 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.1064   -4.0996    0.0150 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.1271   -4.5326    1.3380 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.4921   -4.1465   -0.5971 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.5567   -3.7564    0.3783 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.7731   -4.2766   -0.0647 O   0  0  0  0  0  0  0  0  0  0  0  0
    6.6296   -2.2526    0.5880 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.4578   -1.6083   -0.4612 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.2931   -2.3042   -1.0949 O   0  0  0  0  0  0  0  0  0  0  0  0
    7.3041   -0.2759   -0.7246 O   0  0  0  0  0  0  0  0  0  0  0  0
    7.1849    0.7482    0.2459 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.9612    0.4473    1.5046 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.6822    2.0212   -0.4027 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.3069    2.0217   -1.8613 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.2879    3.2592    0.3261 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.2262    4.2684    0.0080 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.8916    3.7407   -0.0023 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.9922    5.0141   -0.8253 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.1769    3.9783    1.2777 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.0783    3.3288    1.6490 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.0311    2.9347    0.7090 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.5100    3.7582   -0.2050 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1103    5.1241    0.0552 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.3992    5.5029    1.1039 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.6975    4.5550    1.9780 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0586    3.4814    1.5196 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8508    3.4835    0.3764 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.8635    4.3387    0.2311 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7863    4.6866    1.3030 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.2456    3.7927    2.1740 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.9841    2.3638    2.1368 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.2263    1.5466    1.1246 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.5107    1.2494    0.4860 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.0924    2.3094   -0.1786 O   0  0  0  0  0  0  0  0  0  0  0  0
   -6.3811    2.5749    0.1380 C   0  0  0  0  0  0  0  0  0  0  0  0
   -7.1423    2.2072   -1.0078 O   0  0  0  0  0  0  0  0  0  0  0  0
   -7.1812    3.1666   -1.9742 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.9465    2.4545   -3.3153 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.1619    4.2491   -1.8844 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.8802    3.8680   -2.2774 O   0  0  0  0  0  0  0  0  0  0  0  0
   -6.1599    4.9279   -0.5381 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.9763    6.1341   -0.5478 N   0  0  0  0  0  0  0  0  0  0  0  0
   -6.7355    3.9927    0.4729 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.3924    4.3681    1.7699 O   0  0  0  0  0  0  0  0  0  0  0  0
   -4.3083    0.0466   -0.4276 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.8534   -1.1099    0.4454 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.2100   -2.0650   -0.3643 O   0  0  0  0  0  0  0  0  0  0  0  0
   -8.0262   -1.4250   -1.5278 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.2849   -2.6060   -2.7123 H   0  0  0  0  0  0  0  0  0  0  0  0
   -8.2401   -3.1727   -1.2447 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.2755   -1.0269    2.0077 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.2908   -2.9791    2.7372 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.7912   -4.5939    2.4200 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.4324   -4.2329   -0.0099 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.5484   -4.7722    1.5212 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4731   -3.1976    1.9467 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6582   -3.3712   -0.1920 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.8570   -3.7370   -1.4498 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2865   -5.3628    1.0503 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.9880   -5.7835   -1.2356 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8428   -6.6741   -1.5464 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0527   -5.0891   -1.5992 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.9402   -5.7101    0.7288 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8101   -7.8030    0.2312 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.8533   -8.0415   -0.8318 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.6868   -5.7062   -2.4828 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.9124   -6.8329   -0.8078 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.9985   -6.3926    0.6994 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.4034   -4.7929   -1.8667 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.0754   -4.4554   -0.6775 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.7865   -3.0272    0.0332 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.6262   -5.3806    1.4543 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.4742   -3.4646   -1.4718 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.7084   -5.1591   -1.0007 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.3611   -4.2150    1.3644 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.7020   -4.7079   -0.9533 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.0191   -2.0605    1.5981 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.5763   -1.8820    0.5854 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.1162    0.8001    0.5333 H   0  0  0  0  0  0  0  0  0  0  0  0
    8.4983    1.3801    1.7986 H   0  0  0  0  0  0  0  0  0  0  0  0
    8.6890   -0.3629    1.2941 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.2882    0.2024    2.3675 H   0  0  0  0  0  0  0  0  0  0  0  0
    8.8086    1.9583   -0.3742 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.6957    2.9203   -2.3603 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.8595    1.1563   -2.3327 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.2424    1.8252   -2.0486 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.4201    3.0750    1.4118 H   0  0  0  0  0  0  0  0  0  0  0  0
    9.1360    3.8434   -0.0624 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.3513    3.0009   -0.6404 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.1708    5.0988   -1.5645 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.0576    5.8985   -0.1487 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.9369    4.9862   -1.4007 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.5780    4.7246    1.9437 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.9173    3.0587    2.7089 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.6628    1.8947    0.7730 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.3849    3.3495   -1.2147 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.4040    5.8964   -0.6450 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.3165    6.5512    1.3477 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.6853    4.7183    3.0687 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.2283    2.5225    2.0410 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6634    2.7167   -0.3988 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9902    4.7838   -0.7394 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.1199    5.7132    1.4036 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.8776    4.1747    2.9969 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5307    1.9355    3.0652 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3309    1.0146    0.7251 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.3120    0.8861    1.2005 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.8141    1.9260    0.9305 H   0  0  0  0  0  0  0  0  0  0  0  0
   -8.1846    3.6466   -2.0891 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.5931    1.5533   -3.3343 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.1667    3.1145   -4.1608 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.8805    2.1068   -3.3137 H   0  0  0  0  0  0  0  0  0  0  0  0
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   -5.2141   -0.2636   -0.9414 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.1402   -0.8138    1.2142 H   0  0  0  0  0  0  0  0  0  0  0  0
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 65141  1  0
M  END
Download

PDB for HMDB0248359 (Amphotericin B methyl ester)

HEADER    PROTEIN                                 11-SEP-21   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   11-SEP-21         0                                  
HETATM    1  C   UNK     0      44.309  -2.655   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0      42.893  -2.050   0.000  0.00  0.00           C+0
HETATM    3  C   UNK     0      42.709  -0.521   0.000  0.00  0.00           C+0
HETATM    4  C   UNK     0      41.293   0.085   0.000  0.00  0.00           C+0
HETATM    5  C   UNK     0      41.109   1.614   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0      39.693   2.219   0.000  0.00  0.00           C+0
HETATM    7  C   UNK     0      38.461   1.295   0.000  0.00  0.00           C+0
HETATM    8  C   UNK     0      37.045   1.900   0.000  0.00  0.00           C+0
HETATM    9  C   UNK     0      35.812   0.976   0.000  0.00  0.00           C+0
HETATM   10  C   UNK     0      34.396   1.582   0.000  0.00  0.00           C+0
HETATM   11  C   UNK     0      33.164   0.658   0.000  0.00  0.00           C+0
HETATM   12  C   UNK     0      31.748   1.263   0.000  0.00  0.00           C+0
HETATM   13  C   UNK     0      30.516   0.339   0.000  0.00  0.00           C+0
HETATM   14  C   UNK     0      29.100   0.945   0.000  0.00  0.00           C+0
HETATM   15  C   UNK     0      27.868   0.021   0.000  0.00  0.00           C+0
HETATM   16  C   UNK     0      26.451   0.626   0.000  0.00  0.00           C+0
HETATM   17  C   UNK     0      25.219  -0.298   0.000  0.00  0.00           C+0
HETATM   18  C   UNK     0      23.803   0.308   0.000  0.00  0.00           C+0
HETATM   19  C   UNK     0      22.571  -0.616   0.000  0.00  0.00           C+0
HETATM   20  C   UNK     0      21.155  -0.011   0.000  0.00  0.00           C+0
HETATM   21  C   UNK     0      19.923  -0.935   0.000  0.00  0.00           C+0
HETATM   22  C   UNK     0      20.107  -2.464   0.000  0.00  0.00           C+0
HETATM   23  C   UNK     0      21.523  -3.069   0.000  0.00  0.00           C+0
HETATM   24  O   UNK     0      22.755  -2.145   0.000  0.00  0.00           O+0
HETATM   25  C   UNK     0      21.707  -4.598   0.000  0.00  0.00           C+0
HETATM   26  C   UNK     0      23.123  -5.203   0.000  0.00  0.00           C+0
HETATM   27  C   UNK     0      24.355  -4.279   0.000  0.00  0.00           C+0
HETATM   28  C   UNK     0      25.771  -4.885   0.000  0.00  0.00           C+0
HETATM   29  C   UNK     0      27.003  -3.961   0.000  0.00  0.00           C+0
HETATM   30  C   UNK     0      28.419  -4.566   0.000  0.00  0.00           C+0
HETATM   31  C   UNK     0      29.651  -3.642   0.000  0.00  0.00           C+0
HETATM   32  C   UNK     0      31.068  -4.248   0.000  0.00  0.00           C+0
HETATM   33  C   UNK     0      32.300  -3.324   0.000  0.00  0.00           C+0
HETATM   34  C   UNK     0      33.716  -3.929   0.000  0.00  0.00           C+0
HETATM   35  C   UNK     0      34.948  -3.005   0.000  0.00  0.00           C+0
HETATM   36  C   UNK     0      36.364  -3.610   0.000  0.00  0.00           C+0
HETATM   37  O   UNK     0      36.548  -5.139   0.000  0.00  0.00           O+0
HETATM   38  O   UNK     0      37.596  -2.687   0.000  0.00  0.00           O+0
HETATM   39  C   UNK     0      39.012  -3.292   0.000  0.00  0.00           C+0
HETATM   40  C   UNK     0      40.245  -2.368   0.000  0.00  0.00           C+0
HETATM   41  C   UNK     0      41.661  -2.973   0.000  0.00  0.00           C+0
HETATM   42  O   UNK     0      41.845  -4.502   0.000  0.00  0.00           O+0
HETATM   43  C   UNK     0      40.061  -0.839   0.000  0.00  0.00           C+0
HETATM   44  C   UNK     0      39.196  -4.821   0.000  0.00  0.00           C+0
HETATM   45  O   UNK     0      33.900  -5.458   0.000  0.00  0.00           O+0
HETATM   46  O   UNK     0      31.251  -5.777   0.000  0.00  0.00           O+0
HETATM   47  O   UNK     0      26.819  -2.432   0.000  0.00  0.00           O+0
HETATM   48  O   UNK     0      25.955  -6.414   0.000  0.00  0.00           O+0
HETATM   49  O   UNK     0      23.307  -6.732   0.000  0.00  0.00           O+0
HETATM   50  O   UNK     0      20.291  -3.993   0.000  0.00  0.00           O+0
HETATM   51  O   UNK     0      18.507  -0.330   0.000  0.00  0.00           O+0
HETATM   52  C   UNK     0      20.971   1.518   0.000  0.00  0.00           C+0
HETATM   53  O   UNK     0      22.203   2.442   0.000  0.00  0.00           O+0
HETATM   54  O   UNK     0      19.555   2.123   0.000  0.00  0.00           O+0
HETATM   55  C   UNK     0      19.371   3.652   0.000  0.00  0.00           C+0
HETATM   56  O   UNK     0      25.035   1.231   0.000  0.00  0.00           O+0
HETATM   57  C   UNK     0      26.268   2.155   0.000  0.00  0.00           C+0
HETATM   58  C   UNK     0      26.084   3.684   0.000  0.00  0.00           C+0
HETATM   59  C   UNK     0      27.316   4.608   0.000  0.00  0.00           C+0
HETATM   60  C   UNK     0      28.732   4.003   0.000  0.00  0.00           C+0
HETATM   61  C   UNK     0      28.916   2.474   0.000  0.00  0.00           C+0
HETATM   62  O   UNK     0      27.684   1.550   0.000  0.00  0.00           O+0
HETATM   63  C   UNK     0      30.332   1.868   0.000  0.00  0.00           C+0
HETATM   64  O   UNK     0      29.964   4.926   0.000  0.00  0.00           O+0
HETATM   65  N   UNK     0      27.132   6.137   0.000  0.00  0.00           N+0
HETATM   66  O   UNK     0      24.668   4.289   0.000  0.00  0.00           O+0
CONECT    1    2                                                            
CONECT    2    1    3   41                                                  
CONECT    3    2    4                                                       
CONECT    4    3    5                                                       
CONECT    5    4    6                                                       
CONECT    6    5    7                                                       
CONECT    7    6    8                                                       
CONECT    8    7    9                                                       
CONECT    9    8   10                                                       
CONECT   10    9   11                                                       
CONECT   11   10   12                                                       
CONECT   12   11   13                                                       
CONECT   13   12   14                                                       
CONECT   14   13   15                                                       
CONECT   15   14   16                                                       
CONECT   16   15   17                                                       
CONECT   17   16   18   56                                                  
CONECT   18   17   19                                                       
CONECT   19   18   20   24                                                  
CONECT   20   19   21   52                                                  
CONECT   21   20   22   51                                                  
CONECT   22   21   23                                                       
CONECT   23   22   24   25   50                                             
CONECT   24   23   19                                                       
CONECT   25   23   26                                                       
CONECT   26   25   27   49                                                  
CONECT   27   26   28                                                       
CONECT   28   27   29   48                                                  
CONECT   29   28   30   47                                                  
CONECT   30   29   31                                                       
CONECT   31   30   32                                                       
CONECT   32   31   33   46                                                  
CONECT   33   32   34                                                       
CONECT   34   33   35   45                                                  
CONECT   35   34   36                                                       
CONECT   36   35   37   38                                                  
CONECT   37   36                                                            
CONECT   38   36   39                                                       
CONECT   39   38   40   44                                                  
CONECT   40   39   41   43                                                  
CONECT   41   40    2   42                                                  
CONECT   42   41                                                            
CONECT   43   40                                                            
CONECT   44   39                                                            
CONECT   45   34                                                            
CONECT   46   32                                                            
CONECT   47   29                                                            
CONECT   48   28                                                            
CONECT   49   26                                                            
CONECT   50   23                                                            
CONECT   51   21                                                            
CONECT   52   20   53   54                                                  
CONECT   53   52                                                            
CONECT   54   52   55                                                       
CONECT   55   54                                                            
CONECT   56   17   57                                                       
CONECT   57   56   58   62                                                  
CONECT   58   57   59   66                                                  
CONECT   59   58   60   65                                                  
CONECT   60   59   61   64                                                  
CONECT   61   60   62   63                                                  
CONECT   62   61   57                                                       
CONECT   63   61                                                            
CONECT   64   60                                                            
CONECT   65   59                                                            
CONECT   66   58                                                            
MASTER        0    0    0    0    0    0    0    0   66    0  136    0
END
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3D PDB for HMDB0248359 (Amphotericin B methyl ester)

COMPND    HMDB0248359
HETATM    1  C1  UNL     1      -7.532  -2.430  -1.660  1.00  0.00           C  
HETATM    2  O1  UNL     1      -6.362  -2.479  -0.850  1.00  0.00           O  
HETATM    3  C2  UNL     1      -6.268  -1.686   0.279  1.00  0.00           C  
HETATM    4  O2  UNL     1      -7.271  -0.936   0.532  1.00  0.00           O  
HETATM    5  C3  UNL     1      -5.062  -1.717   1.140  1.00  0.00           C  
HETATM    6  C4  UNL     1      -4.775  -3.061   1.721  1.00  0.00           C  
HETATM    7  O3  UNL     1      -5.983  -3.759   1.901  1.00  0.00           O  
HETATM    8  C5  UNL     1      -3.866  -3.918   0.890  1.00  0.00           C  
HETATM    9  C6  UNL     1      -2.707  -3.070   0.439  1.00  0.00           C  
HETATM   10  O4  UNL     1      -2.123  -2.534   1.595  1.00  0.00           O  
HETATM   11  C7  UNL     1      -1.676  -3.816  -0.339  1.00  0.00           C  
HETATM   12  C8  UNL     1      -1.573  -5.270  -0.024  1.00  0.00           C  
HETATM   13  O5  UNL     1      -2.737  -5.971  -0.313  1.00  0.00           O  
HETATM   14  C9  UNL     1      -0.484  -5.854  -0.921  1.00  0.00           C  
HETATM   15  C10 UNL     1       0.618  -6.427  -0.029  1.00  0.00           C  
HETATM   16  O6  UNL     1       0.055  -7.525   0.621  1.00  0.00           O  
HETATM   17  C11 UNL     1       1.735  -6.930  -0.914  1.00  0.00           C  
HETATM   18  O7  UNL     1       1.518  -6.641  -2.258  1.00  0.00           O  
HETATM   19  C12 UNL     1       3.030  -6.330  -0.408  1.00  0.00           C  
HETATM   20  C13 UNL     1       3.103  -4.859  -0.798  1.00  0.00           C  
HETATM   21  C14 UNL     1       4.106  -4.100   0.015  1.00  0.00           C  
HETATM   22  O8  UNL     1       4.127  -4.533   1.338  1.00  0.00           O  
HETATM   23  C15 UNL     1       5.492  -4.147  -0.597  1.00  0.00           C  
HETATM   24  C16 UNL     1       6.557  -3.756   0.378  1.00  0.00           C  
HETATM   25  O9  UNL     1       7.773  -4.277  -0.065  1.00  0.00           O  
HETATM   26  C17 UNL     1       6.630  -2.253   0.588  1.00  0.00           C  
HETATM   27  C18 UNL     1       7.458  -1.608  -0.461  1.00  0.00           C  
HETATM   28  O10 UNL     1       8.293  -2.304  -1.095  1.00  0.00           O  
HETATM   29  O11 UNL     1       7.304  -0.276  -0.725  1.00  0.00           O  
HETATM   30  C19 UNL     1       7.185   0.748   0.246  1.00  0.00           C  
HETATM   31  C20 UNL     1       7.961   0.447   1.505  1.00  0.00           C  
HETATM   32  C21 UNL     1       7.682   2.021  -0.403  1.00  0.00           C  
HETATM   33  C22 UNL     1       7.307   2.022  -1.861  1.00  0.00           C  
HETATM   34  C23 UNL     1       7.288   3.259   0.326  1.00  0.00           C  
HETATM   35  O12 UNL     1       8.226   4.268   0.008  1.00  0.00           O  
HETATM   36  C24 UNL     1       5.892   3.741  -0.002  1.00  0.00           C  
HETATM   37  C25 UNL     1       5.992   5.014  -0.825  1.00  0.00           C  
HETATM   38  C26 UNL     1       5.177   3.978   1.278  1.00  0.00           C  
HETATM   39  C27 UNL     1       4.078   3.329   1.649  1.00  0.00           C  
HETATM   40  C28 UNL     1       3.031   2.935   0.709  1.00  0.00           C  
HETATM   41  C29 UNL     1       2.510   3.758  -0.205  1.00  0.00           C  
HETATM   42  C30 UNL     1       2.110   5.124   0.055  1.00  0.00           C  
HETATM   43  C31 UNL     1       1.399   5.503   1.104  1.00  0.00           C  
HETATM   44  C32 UNL     1       0.698   4.555   1.978  1.00  0.00           C  
HETATM   45  C33 UNL     1       0.059   3.481   1.520  1.00  0.00           C  
HETATM   46  C34 UNL     1      -0.851   3.483   0.376  1.00  0.00           C  
HETATM   47  C35 UNL     1      -1.864   4.339   0.231  1.00  0.00           C  
HETATM   48  C36 UNL     1      -2.786   4.687   1.303  1.00  0.00           C  
HETATM   49  C37 UNL     1      -3.246   3.793   2.174  1.00  0.00           C  
HETATM   50  C38 UNL     1      -2.984   2.364   2.137  1.00  0.00           C  
HETATM   51  C39 UNL     1      -3.226   1.547   1.125  1.00  0.00           C  
HETATM   52  C40 UNL     1      -4.511   1.249   0.486  1.00  0.00           C  
HETATM   53  O13 UNL     1      -5.092   2.309  -0.179  1.00  0.00           O  
HETATM   54  C41 UNL     1      -6.381   2.575   0.138  1.00  0.00           C  
HETATM   55  O14 UNL     1      -7.142   2.207  -1.008  1.00  0.00           O  
HETATM   56  C42 UNL     1      -7.181   3.167  -1.974  1.00  0.00           C  
HETATM   57  C43 UNL     1      -6.947   2.455  -3.315  1.00  0.00           C  
HETATM   58  C44 UNL     1      -6.162   4.249  -1.884  1.00  0.00           C  
HETATM   59  O15 UNL     1      -4.880   3.868  -2.277  1.00  0.00           O  
HETATM   60  C45 UNL     1      -6.160   4.928  -0.538  1.00  0.00           C  
HETATM   61  N1  UNL     1      -6.976   6.134  -0.548  1.00  0.00           N  
HETATM   62  C46 UNL     1      -6.735   3.993   0.473  1.00  0.00           C  
HETATM   63  O16 UNL     1      -6.392   4.368   1.770  1.00  0.00           O  
HETATM   64  C47 UNL     1      -4.308   0.047  -0.428  1.00  0.00           C  
HETATM   65  C48 UNL     1      -3.853  -1.110   0.445  1.00  0.00           C  
HETATM   66  O17 UNL     1      -3.210  -2.065  -0.364  1.00  0.00           O  
HETATM   67  H1  UNL     1      -8.026  -1.425  -1.528  1.00  0.00           H  
HETATM   68  H2  UNL     1      -7.285  -2.606  -2.712  1.00  0.00           H  
HETATM   69  H3  UNL     1      -8.240  -3.173  -1.245  1.00  0.00           H  
HETATM   70  H4  UNL     1      -5.275  -1.027   2.008  1.00  0.00           H  
HETATM   71  H5  UNL     1      -4.291  -2.979   2.737  1.00  0.00           H  
HETATM   72  H6  UNL     1      -5.791  -4.594   2.420  1.00  0.00           H  
HETATM   73  H7  UNL     1      -4.432  -4.233  -0.010  1.00  0.00           H  
HETATM   74  H8  UNL     1      -3.548  -4.772   1.521  1.00  0.00           H  
HETATM   75  H9  UNL     1      -1.473  -3.198   1.947  1.00  0.00           H  
HETATM   76  H10 UNL     1      -0.658  -3.371  -0.192  1.00  0.00           H  
HETATM   77  H11 UNL     1      -1.857  -3.737  -1.450  1.00  0.00           H  
HETATM   78  H12 UNL     1      -1.287  -5.363   1.050  1.00  0.00           H  
HETATM   79  H13 UNL     1      -2.988  -5.783  -1.236  1.00  0.00           H  
HETATM   80  H14 UNL     1      -0.843  -6.674  -1.546  1.00  0.00           H  
HETATM   81  H15 UNL     1      -0.053  -5.089  -1.599  1.00  0.00           H  
HETATM   82  H16 UNL     1       0.940  -5.710   0.729  1.00  0.00           H  
HETATM   83  H17 UNL     1      -0.810  -7.803   0.231  1.00  0.00           H  
HETATM   84  H18 UNL     1       1.853  -8.041  -0.832  1.00  0.00           H  
HETATM   85  H19 UNL     1       1.687  -5.706  -2.483  1.00  0.00           H  
HETATM   86  H20 UNL     1       3.912  -6.833  -0.808  1.00  0.00           H  
HETATM   87  H21 UNL     1       2.999  -6.393   0.699  1.00  0.00           H  
HETATM   88  H22 UNL     1       3.403  -4.793  -1.867  1.00  0.00           H  
HETATM   89  H23 UNL     1       2.075  -4.455  -0.678  1.00  0.00           H  
HETATM   90  H24 UNL     1       3.787  -3.027   0.033  1.00  0.00           H  
HETATM   91  H25 UNL     1       4.626  -5.381   1.454  1.00  0.00           H  
HETATM   92  H26 UNL     1       5.474  -3.465  -1.472  1.00  0.00           H  
HETATM   93  H27 UNL     1       5.708  -5.159  -1.001  1.00  0.00           H  
HETATM   94  H28 UNL     1       6.361  -4.215   1.364  1.00  0.00           H  
HETATM   95  H29 UNL     1       7.702  -4.708  -0.953  1.00  0.00           H  
HETATM   96  H30 UNL     1       7.019  -2.061   1.598  1.00  0.00           H  
HETATM   97  H31 UNL     1       5.576  -1.882   0.585  1.00  0.00           H  
HETATM   98  H32 UNL     1       6.116   0.800   0.533  1.00  0.00           H  
HETATM   99  H33 UNL     1       8.498   1.380   1.799  1.00  0.00           H  
HETATM  100  H34 UNL     1       8.689  -0.363   1.294  1.00  0.00           H  
HETATM  101  H35 UNL     1       7.288   0.202   2.367  1.00  0.00           H  
HETATM  102  H36 UNL     1       8.809   1.958  -0.374  1.00  0.00           H  
HETATM  103  H37 UNL     1       7.696   2.920  -2.360  1.00  0.00           H  
HETATM  104  H38 UNL     1       7.860   1.156  -2.333  1.00  0.00           H  
HETATM  105  H39 UNL     1       6.242   1.825  -2.049  1.00  0.00           H  
HETATM  106  H40 UNL     1       7.420   3.075   1.412  1.00  0.00           H  
HETATM  107  H41 UNL     1       9.136   3.843  -0.062  1.00  0.00           H  
HETATM  108  H42 UNL     1       5.351   3.001  -0.640  1.00  0.00           H  
HETATM  109  H43 UNL     1       5.171   5.099  -1.565  1.00  0.00           H  
HETATM  110  H44 UNL     1       6.058   5.899  -0.149  1.00  0.00           H  
HETATM  111  H45 UNL     1       6.937   4.986  -1.401  1.00  0.00           H  
HETATM  112  H46 UNL     1       5.578   4.725   1.944  1.00  0.00           H  
HETATM  113  H47 UNL     1       3.917   3.059   2.709  1.00  0.00           H  
HETATM  114  H48 UNL     1       2.663   1.895   0.773  1.00  0.00           H  
HETATM  115  H49 UNL     1       2.385   3.350  -1.215  1.00  0.00           H  
HETATM  116  H50 UNL     1       2.404   5.896  -0.645  1.00  0.00           H  
HETATM  117  H51 UNL     1       1.317   6.551   1.348  1.00  0.00           H  
HETATM  118  H52 UNL     1       0.685   4.718   3.069  1.00  0.00           H  
HETATM  119  H53 UNL     1       0.228   2.522   2.041  1.00  0.00           H  
HETATM  120  H54 UNL     1      -0.663   2.717  -0.399  1.00  0.00           H  
HETATM  121  H55 UNL     1      -1.990   4.784  -0.739  1.00  0.00           H  
HETATM  122  H56 UNL     1      -3.120   5.713   1.404  1.00  0.00           H  
HETATM  123  H57 UNL     1      -3.878   4.175   2.997  1.00  0.00           H  
HETATM  124  H58 UNL     1      -2.531   1.936   3.065  1.00  0.00           H  
HETATM  125  H59 UNL     1      -2.331   1.015   0.725  1.00  0.00           H  
HETATM  126  H60 UNL     1      -5.312   0.886   1.200  1.00  0.00           H  
HETATM  127  H61 UNL     1      -6.814   1.926   0.931  1.00  0.00           H  
HETATM  128  H62 UNL     1      -8.185   3.647  -2.089  1.00  0.00           H  
HETATM  129  H63 UNL     1      -7.593   1.553  -3.334  1.00  0.00           H  
HETATM  130  H64 UNL     1      -7.167   3.115  -4.161  1.00  0.00           H  
HETATM  131  H65 UNL     1      -5.880   2.107  -3.314  1.00  0.00           H  
HETATM  132  H66 UNL     1      -6.486   5.045  -2.616  1.00  0.00           H  
HETATM  133  H67 UNL     1      -4.355   4.718  -2.369  1.00  0.00           H  
HETATM  134  H68 UNL     1      -5.157   5.234  -0.218  1.00  0.00           H  
HETATM  135  H69 UNL     1      -6.464   6.972  -0.216  1.00  0.00           H  
HETATM  136  H70 UNL     1      -7.488   6.276  -1.427  1.00  0.00           H  
HETATM  137  H71 UNL     1      -7.870   4.074   0.463  1.00  0.00           H  
HETATM  138  H72 UNL     1      -6.710   3.754   2.449  1.00  0.00           H  
HETATM  139  H73 UNL     1      -3.452   0.289  -1.092  1.00  0.00           H  
HETATM  140  H74 UNL     1      -5.214  -0.264  -0.941  1.00  0.00           H  
HETATM  141  H75 UNL     1      -3.140  -0.814   1.214  1.00  0.00           H  
CONECT    1    2   67   68   69
CONECT    2    3
CONECT    3    4    4    5
CONECT    5    6   65   70
CONECT    6    7    8   71
CONECT    7   72
CONECT    8    9   73   74
CONECT    9   10   11   66
CONECT   10   75
CONECT   11   12   76   77
CONECT   12   13   14   78
CONECT   13   79
CONECT   14   15   80   81
CONECT   15   16   17   82
CONECT   16   83
CONECT   17   18   19   84
CONECT   18   85
CONECT   19   20   86   87
CONECT   20   21   88   89
CONECT   21   22   23   90
CONECT   22   91
CONECT   23   24   92   93
CONECT   24   25   26   94
CONECT   25   95
CONECT   26   27   96   97
CONECT   27   28   28   29
CONECT   29   30
CONECT   30   31   32   98
CONECT   31   99  100  101
CONECT   32   33   34  102
CONECT   33  103  104  105
CONECT   34   35   36  106
CONECT   35  107
CONECT   36   37   38  108
CONECT   37  109  110  111
CONECT   38   39   39  112
CONECT   39   40  113
CONECT   40   41   41  114
CONECT   41   42  115
CONECT   42   43   43  116
CONECT   43   44  117
CONECT   44   45   45  118
CONECT   45   46  119
CONECT   46   47   47  120
CONECT   47   48  121
CONECT   48   49   49  122
CONECT   49   50  123
CONECT   50   51   51  124
CONECT   51   52  125
CONECT   52   53   64  126
CONECT   53   54
CONECT   54   55   62  127
CONECT   55   56
CONECT   56   57   58  128
CONECT   57  129  130  131
CONECT   58   59   60  132
CONECT   59  133
CONECT   60   61   62  134
CONECT   61  135  136
CONECT   62   63  137
CONECT   63  138
CONECT   64   65  139  140
CONECT   65   66  141
END
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SMILES for HMDB0248359 (Amphotericin B methyl ester)

COC(=O)C1C(O)CC2(O)CC(O)CC(O)C(O)CCC(O)CC(O)CC(=O)OC(C)C(C)C(O)C(C)C=CC=CC=CC=CC=CC=CC=CC(CC1O2)OC1OC(C)C(O)C(N)C1O
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INCHI for HMDB0248359 (Amphotericin B methyl ester)

InChI=1S/C48H75NO17/c1-28-18-16-14-12-10-8-6-7-9-11-13-15-17-19-35(65-47-45(59)42(49)44(58)31(4)64-47)25-39-41(46(60)62-5)38(55)27-48(61,66-39)26-34(52)23-37(54)36(53)21-20-32(50)22-33(51)24-40(56)63-30(3)29(2)43(28)57/h6-19,28-39,41-45,47,50-55,57-59,61H,20-27,49H2,1-5H3
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View in JSmolView Stereo Labels
Synonyms
ValueSource
Methyl 33-[(4-amino-3,5-dihydroxy-6-methyloxan-2-yl)oxy]-1,3,5,6,9,11,17,37-octahydroxy-15,16,18-trimethyl-13-oxo-14,39-dioxabicyclo[33.3.1]nonatriaconta-19,21,23,25,27,29,31-heptaene-36-carboxylic acidHMDB
Chemical FormulaC48H75NO17
Average Molecular Weight938.118
Monoisotopic Molecular Weight937.503499959
IUPAC Namemethyl 33-[(4-amino-3,5-dihydroxy-6-methyloxan-2-yl)oxy]-1,3,5,6,9,11,17,37-octahydroxy-15,16,18-trimethyl-13-oxo-14,39-dioxabicyclo[33.3.1]nonatriaconta-19,21,23,25,27,29,31-heptaene-36-carboxylate
Traditional Namemethyl 33-[(4-amino-3,5-dihydroxy-6-methyloxan-2-yl)oxy]-1,3,5,6,9,11,17,37-octahydroxy-15,16,18-trimethyl-13-oxo-14,39-dioxabicyclo[33.3.1]nonatriaconta-19,21,23,25,27,29,31-heptaene-36-carboxylate
CAS Registry NumberNot Available
SMILES
COC(=O)C1C(O)CC2(O)CC(O)CC(O)C(O)CCC(O)CC(O)CC(=O)OC(C)C(C)C(O)C(C)C=CC=CC=CC=CC=CC=CC=CC(CC1O2)OC1OC(C)C(O)C(N)C1O
InChI Identifier
InChI=1S/C48H75NO17/c1-28-18-16-14-12-10-8-6-7-9-11-13-15-17-19-35(65-47-45(59)42(49)44(58)31(4)64-47)25-39-41(46(60)62-5)38(55)27-48(61,66-39)26-34(52)23-37(54)36(53)21-20-32(50)22-33(51)24-40(56)63-30(3)29(2)43(28)57/h6-19,28-39,41-45,47,50-55,57-59,61H,20-27,49H2,1-5H3
InChI KeyUAZIZEMIKKIBCA-UHFFFAOYSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as aminoglycosides. These are molecules or a portion of a molecule composed of amino-modified sugars.
KingdomOrganic compounds
Super ClassOrganic oxygen compounds
ClassOrganooxygen compounds
Sub ClassCarbohydrates and carbohydrate conjugates
Direct ParentAminoglycosides
Alternative Parents
Substituents
  • Aminoglycoside core
  • Macrolide
  • Hexose monosaccharide
  • Glycosyl compound
  • O-glycosyl compound
  • Beta-hydroxy acid
  • Dicarboxylic acid or derivatives
  • Hydroxy acid
  • Monosaccharide
  • Oxane
  • Methyl ester
  • 1,2-aminoalcohol
  • Hemiacetal
  • Amino acid or derivatives
  • Lactone
  • Carboxylic acid ester
  • Secondary alcohol
  • Organoheterocyclic compound
  • Oxacycle
  • Acetal
  • Polyol
  • Carboxylic acid derivative
  • Organic nitrogen compound
  • Primary aliphatic amine
  • Organonitrogen compound
  • Carbonyl group
  • Primary amine
  • Hydrocarbon derivative
  • Organic oxide
  • Amine
  • Alcohol
  • Organopnictogen compound
  • Aliphatic heteropolycyclic compound
Molecular FrameworkAliphatic heteropolycyclic compounds
External DescriptorsNot Available
Ontology
Physiological effectNot Available
Disposition
Biological locationSource
ProcessNot Available
RoleNot Available
Physical Properties
StateNot Available
Experimental Molecular Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
Predicted Chromatographic Properties
Spectra

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Amphotericin B methyl ester 10V, Positive-QTOFsplash10-0udi-0000000009-9c8dbab13ea2dd7fffa42021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Amphotericin B methyl ester 20V, Positive-QTOFsplash10-0udi-0000000139-78b626f9430959beb5d52021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Amphotericin B methyl ester 40V, Positive-QTOFsplash10-056u-7100000943-a1f226fe28a1b34de96e2021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Amphotericin B methyl ester 10V, Negative-QTOFsplash10-000i-0200000019-d1000707e2565f569d722021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Amphotericin B methyl ester 20V, Negative-QTOFsplash10-0udr-0000000039-866d026985d886a8a4e52021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Amphotericin B methyl ester 40V, Negative-QTOFsplash10-0udi-2300001519-7adbbe851ea4cc40e7572021-10-12Wishart LabView Spectrum
Biological Properties
Cellular LocationsNot Available
Biospecimen Locations
  • Blood
Tissue LocationsNot Available
Pathways
Normal Concentrations
BiospecimenStatusValueAgeSexConditionReferenceDetails
BloodDetected but not QuantifiedNot QuantifiedNot SpecifiedNot SpecifiedNormal details
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDNot Available
KNApSAcK IDNot Available
Chemspider ID379717
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound429301
PDB IDNot Available
ChEBI IDNot Available
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDNot Available
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General References
  1. Barupal DK, Fiehn O: Generating the Blood Exposome Database Using a Comprehensive Text Mining and Database Fusion Approach. Environ Health Perspect. 2019 Sep;127(9):97008. doi: 10.1289/EHP4713. Epub 2019 Sep 26. [PubMed:31557052 ]