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Record Information
Version5.0
StatusDetected but not Quantified
Creation Date2021-09-11 07:14:00 UTC
Update Date2021-09-26 23:01:35 UTC
HMDB IDHMDB0250249
Secondary Accession NumbersNone
Metabolite Identification
Common NameCimaterol
Description2-amino-5-{1-hydroxy-2-[(propan-2-yl)amino]ethyl}benzonitrile belongs to the class of organic compounds known as benzonitriles. These are organic compounds containing a benzene bearing a nitrile substituent. Based on a literature review very few articles have been published on 2-amino-5-{1-hydroxy-2-[(propan-2-yl)amino]ethyl}benzonitrile. This compound has been identified in human blood as reported by (PMID: 31557052 ). Cimaterol is not a naturally occurring metabolite and is only found in those individuals exposed to this compound or its derivatives. Technically Cimaterol is part of the human exposome. The exposome can be defined as the collection of all the exposures of an individual in a lifetime and how those exposures relate to health. An individual's exposure begins before birth and includes insults from environmental and occupational sources.
Structure
Thumb
Synonyms
ValueSource
AB-a-663ac-263780cimaterolChEMBL
5-(1-Hydroxy-2-(isopropylamino)ethyl)anthranilonitrileMeSH
CimatrolMeSH
Chemical FormulaC12H17N3O
Average Molecular Weight219.288
Monoisotopic Molecular Weight219.137162179
IUPAC Name2-amino-5-{1-hydroxy-2-[(propan-2-yl)amino]ethyl}benzonitrile
Traditional Namecimaterol
CAS Registry NumberNot Available
SMILES
CC(C)NCC(O)C1=CC(C#N)=C(N)C=C1
InChI Identifier
InChI=1S/C12H17N3O/c1-8(2)15-7-12(16)9-3-4-11(14)10(5-9)6-13/h3-5,8,12,15-16H,7,14H2,1-2H3
InChI KeyBUXRLJCGHZZYNE-UHFFFAOYSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as benzonitriles. These are organic compounds containing a benzene bearing a nitrile substituent.
KingdomOrganic compounds
Super ClassBenzenoids
ClassBenzene and substituted derivatives
Sub ClassBenzonitriles
Direct ParentBenzonitriles
Alternative Parents
Substituents
  • Benzonitrile
  • Aniline or substituted anilines
  • Aralkylamine
  • 1,2-aminoalcohol
  • Secondary alcohol
  • Secondary aliphatic amine
  • Carbonitrile
  • Nitrile
  • Secondary amine
  • Primary amine
  • Organooxygen compound
  • Organonitrogen compound
  • Amine
  • Alcohol
  • Organic nitrogen compound
  • Organic oxygen compound
  • Organopnictogen compound
  • Aromatic alcohol
  • Hydrocarbon derivative
  • Aromatic homomonocyclic compound
Molecular FrameworkAromatic homomonocyclic compounds
External DescriptorsNot Available
Ontology
Physiological effectNot Available
Disposition
ProcessNot Available
RoleNot Available
Physical Properties
StateNot Available
Experimental Molecular Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
logP0.63ALOGPS
logP0.7ChemAxon
logS-2.6ALOGPS
pKa (Strongest Acidic)14.11ChemAxon
pKa (Strongest Basic)9.57ChemAxon
Physiological Charge1ChemAxon
Hydrogen Acceptor Count4ChemAxon
Hydrogen Donor Count3ChemAxon
Polar Surface Area82.07 ŲChemAxon
Rotatable Bond Count4ChemAxon
Refractivity64.86 m³·mol⁻¹ChemAxon
Polarizability24.12 ųChemAxon
Number of Rings1ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterYesChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DeepCCS[M+H]+157.15930932474
DeepCCS[M-H]-154.80130932474
DeepCCS[M-2H]-187.80830932474
DeepCCS[M+Na]+163.25230932474
AllCCS[M+H]+151.932859911
AllCCS[M+H-H2O]+148.232859911
AllCCS[M+NH4]+155.332859911
AllCCS[M+Na]+156.332859911
AllCCS[M-H]-153.432859911
AllCCS[M+Na-2H]-154.032859911
AllCCS[M+HCOO]-154.832859911

Predicted Kovats Retention Indices

Underivatized

MetaboliteSMILESKovats RI ValueColumn TypeReference
CimaterolCC(C)NCC(O)C1=CC(C#N)=C(N)C=C13029.8Standard polar33892256
CimaterolCC(C)NCC(O)C1=CC(C#N)=C(N)C=C11837.8Standard non polar33892256
CimaterolCC(C)NCC(O)C1=CC(C#N)=C(N)C=C12026.9Semi standard non polar33892256

Derivatized

Derivative Name / StructureSMILESKovats RI ValueColumn TypeReference
Cimaterol,2TMS,isomer #1CC(C)NCC(O[Si](C)(C)C)C1=CC=C(N[Si](C)(C)C)C(C#N)=C12128.7Semi standard non polar33892256
Cimaterol,2TMS,isomer #1CC(C)NCC(O[Si](C)(C)C)C1=CC=C(N[Si](C)(C)C)C(C#N)=C12120.7Standard non polar33892256
Cimaterol,2TMS,isomer #1CC(C)NCC(O[Si](C)(C)C)C1=CC=C(N[Si](C)(C)C)C(C#N)=C12665.0Standard polar33892256
Cimaterol,2TMS,isomer #2CC(C)N(CC(O[Si](C)(C)C)C1=CC=C(N)C(C#N)=C1)[Si](C)(C)C2209.8Semi standard non polar33892256
Cimaterol,2TMS,isomer #2CC(C)N(CC(O[Si](C)(C)C)C1=CC=C(N)C(C#N)=C1)[Si](C)(C)C2193.4Standard non polar33892256
Cimaterol,2TMS,isomer #2CC(C)N(CC(O[Si](C)(C)C)C1=CC=C(N)C(C#N)=C1)[Si](C)(C)C2894.0Standard polar33892256
Cimaterol,2TMS,isomer #3CC(C)N(CC(O)C1=CC=C(N[Si](C)(C)C)C(C#N)=C1)[Si](C)(C)C2310.4Semi standard non polar33892256
Cimaterol,2TMS,isomer #3CC(C)N(CC(O)C1=CC=C(N[Si](C)(C)C)C(C#N)=C1)[Si](C)(C)C2306.7Standard non polar33892256
Cimaterol,2TMS,isomer #3CC(C)N(CC(O)C1=CC=C(N[Si](C)(C)C)C(C#N)=C1)[Si](C)(C)C2806.6Standard polar33892256
Cimaterol,2TMS,isomer #4CC(C)NCC(O)C1=CC=C(N([Si](C)(C)C)[Si](C)(C)C)C(C#N)=C12144.3Semi standard non polar33892256
Cimaterol,2TMS,isomer #4CC(C)NCC(O)C1=CC=C(N([Si](C)(C)C)[Si](C)(C)C)C(C#N)=C12229.6Standard non polar33892256
Cimaterol,2TMS,isomer #4CC(C)NCC(O)C1=CC=C(N([Si](C)(C)C)[Si](C)(C)C)C(C#N)=C12752.5Standard polar33892256
Cimaterol,3TMS,isomer #1CC(C)N(CC(O[Si](C)(C)C)C1=CC=C(N[Si](C)(C)C)C(C#N)=C1)[Si](C)(C)C2302.3Semi standard non polar33892256
Cimaterol,3TMS,isomer #1CC(C)N(CC(O[Si](C)(C)C)C1=CC=C(N[Si](C)(C)C)C(C#N)=C1)[Si](C)(C)C2226.2Standard non polar33892256
Cimaterol,3TMS,isomer #1CC(C)N(CC(O[Si](C)(C)C)C1=CC=C(N[Si](C)(C)C)C(C#N)=C1)[Si](C)(C)C2600.2Standard polar33892256
Cimaterol,3TMS,isomer #2CC(C)NCC(O[Si](C)(C)C)C1=CC=C(N([Si](C)(C)C)[Si](C)(C)C)C(C#N)=C12051.1Semi standard non polar33892256
Cimaterol,3TMS,isomer #2CC(C)NCC(O[Si](C)(C)C)C1=CC=C(N([Si](C)(C)C)[Si](C)(C)C)C(C#N)=C12218.2Standard non polar33892256
Cimaterol,3TMS,isomer #2CC(C)NCC(O[Si](C)(C)C)C1=CC=C(N([Si](C)(C)C)[Si](C)(C)C)C(C#N)=C12488.1Standard polar33892256
Cimaterol,3TMS,isomer #3CC(C)N(CC(O)C1=CC=C(N([Si](C)(C)C)[Si](C)(C)C)C(C#N)=C1)[Si](C)(C)C2239.4Semi standard non polar33892256
Cimaterol,3TMS,isomer #3CC(C)N(CC(O)C1=CC=C(N([Si](C)(C)C)[Si](C)(C)C)C(C#N)=C1)[Si](C)(C)C2417.2Standard non polar33892256
Cimaterol,3TMS,isomer #3CC(C)N(CC(O)C1=CC=C(N([Si](C)(C)C)[Si](C)(C)C)C(C#N)=C1)[Si](C)(C)C2638.2Standard polar33892256
Cimaterol,4TMS,isomer #1CC(C)N(CC(O[Si](C)(C)C)C1=CC=C(N([Si](C)(C)C)[Si](C)(C)C)C(C#N)=C1)[Si](C)(C)C2312.7Semi standard non polar33892256
Cimaterol,4TMS,isomer #1CC(C)N(CC(O[Si](C)(C)C)C1=CC=C(N([Si](C)(C)C)[Si](C)(C)C)C(C#N)=C1)[Si](C)(C)C2318.3Standard non polar33892256
Cimaterol,4TMS,isomer #1CC(C)N(CC(O[Si](C)(C)C)C1=CC=C(N([Si](C)(C)C)[Si](C)(C)C)C(C#N)=C1)[Si](C)(C)C2432.1Standard polar33892256
Cimaterol,2TBDMS,isomer #1CC(C)NCC(O[Si](C)(C)C(C)(C)C)C1=CC=C(N[Si](C)(C)C(C)(C)C)C(C#N)=C12591.3Semi standard non polar33892256
Cimaterol,2TBDMS,isomer #1CC(C)NCC(O[Si](C)(C)C(C)(C)C)C1=CC=C(N[Si](C)(C)C(C)(C)C)C(C#N)=C12553.9Standard non polar33892256
Cimaterol,2TBDMS,isomer #1CC(C)NCC(O[Si](C)(C)C(C)(C)C)C1=CC=C(N[Si](C)(C)C(C)(C)C)C(C#N)=C12840.3Standard polar33892256
Cimaterol,2TBDMS,isomer #2CC(C)N(CC(O[Si](C)(C)C(C)(C)C)C1=CC=C(N)C(C#N)=C1)[Si](C)(C)C(C)(C)C2717.5Semi standard non polar33892256
Cimaterol,2TBDMS,isomer #2CC(C)N(CC(O[Si](C)(C)C(C)(C)C)C1=CC=C(N)C(C#N)=C1)[Si](C)(C)C(C)(C)C2638.2Standard non polar33892256
Cimaterol,2TBDMS,isomer #2CC(C)N(CC(O[Si](C)(C)C(C)(C)C)C1=CC=C(N)C(C#N)=C1)[Si](C)(C)C(C)(C)C3004.7Standard polar33892256
Cimaterol,2TBDMS,isomer #3CC(C)N(CC(O)C1=CC=C(N[Si](C)(C)C(C)(C)C)C(C#N)=C1)[Si](C)(C)C(C)(C)C2774.6Semi standard non polar33892256
Cimaterol,2TBDMS,isomer #3CC(C)N(CC(O)C1=CC=C(N[Si](C)(C)C(C)(C)C)C(C#N)=C1)[Si](C)(C)C(C)(C)C2738.6Standard non polar33892256
Cimaterol,2TBDMS,isomer #3CC(C)N(CC(O)C1=CC=C(N[Si](C)(C)C(C)(C)C)C(C#N)=C1)[Si](C)(C)C(C)(C)C2948.3Standard polar33892256
Cimaterol,2TBDMS,isomer #4CC(C)NCC(O)C1=CC=C(N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C)C(C#N)=C12613.9Semi standard non polar33892256
Cimaterol,2TBDMS,isomer #4CC(C)NCC(O)C1=CC=C(N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C)C(C#N)=C12634.5Standard non polar33892256
Cimaterol,2TBDMS,isomer #4CC(C)NCC(O)C1=CC=C(N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C)C(C#N)=C12884.7Standard polar33892256
Cimaterol,3TBDMS,isomer #1CC(C)N(CC(O[Si](C)(C)C(C)(C)C)C1=CC=C(N[Si](C)(C)C(C)(C)C)C(C#N)=C1)[Si](C)(C)C(C)(C)C3006.0Semi standard non polar33892256
Cimaterol,3TBDMS,isomer #1CC(C)N(CC(O[Si](C)(C)C(C)(C)C)C1=CC=C(N[Si](C)(C)C(C)(C)C)C(C#N)=C1)[Si](C)(C)C(C)(C)C2863.0Standard non polar33892256
Cimaterol,3TBDMS,isomer #1CC(C)N(CC(O[Si](C)(C)C(C)(C)C)C1=CC=C(N[Si](C)(C)C(C)(C)C)C(C#N)=C1)[Si](C)(C)C(C)(C)C2890.6Standard polar33892256
Cimaterol,3TBDMS,isomer #2CC(C)NCC(O[Si](C)(C)C(C)(C)C)C1=CC=C(N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C)C(C#N)=C12778.5Semi standard non polar33892256
Cimaterol,3TBDMS,isomer #2CC(C)NCC(O[Si](C)(C)C(C)(C)C)C1=CC=C(N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C)C(C#N)=C12814.4Standard non polar33892256
Cimaterol,3TBDMS,isomer #2CC(C)NCC(O[Si](C)(C)C(C)(C)C)C1=CC=C(N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C)C(C#N)=C12780.4Standard polar33892256
Cimaterol,3TBDMS,isomer #3CC(C)N(CC(O)C1=CC=C(N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C)C(C#N)=C1)[Si](C)(C)C(C)(C)C2934.0Semi standard non polar33892256
Cimaterol,3TBDMS,isomer #3CC(C)N(CC(O)C1=CC=C(N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C)C(C#N)=C1)[Si](C)(C)C(C)(C)C2975.8Standard non polar33892256
Cimaterol,3TBDMS,isomer #3CC(C)N(CC(O)C1=CC=C(N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C)C(C#N)=C1)[Si](C)(C)C(C)(C)C2890.9Standard polar33892256
Cimaterol,4TBDMS,isomer #1CC(C)N(CC(O[Si](C)(C)C(C)(C)C)C1=CC=C(N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C)C(C#N)=C1)[Si](C)(C)C(C)(C)C3187.0Semi standard non polar33892256
Cimaterol,4TBDMS,isomer #1CC(C)N(CC(O[Si](C)(C)C(C)(C)C)C1=CC=C(N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C)C(C#N)=C1)[Si](C)(C)C(C)(C)C3096.7Standard non polar33892256
Cimaterol,4TBDMS,isomer #1CC(C)N(CC(O[Si](C)(C)C(C)(C)C)C1=CC=C(N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C)C(C#N)=C1)[Si](C)(C)C(C)(C)C2805.4Standard polar33892256
Spectra

GC-MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted GC-MSPredicted GC-MS Spectrum - Cimaterol GC-MS (Non-derivatized) - 70eV, Positivesplash10-006t-9810000000-5c0c2e497d7279e208ef2021-09-23Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Cimaterol GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Cimaterol GC-MS (TMS_1_1) - 70eV, PositiveNot Available2021-11-03Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Cimaterol GC-MS (TMS_1_2) - 70eV, PositiveNot Available2021-11-03Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Cimaterol GC-MS (TMS_1_3) - 70eV, PositiveNot Available2021-11-03Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Cimaterol GC-MS (TBDMS_1_1) - 70eV, PositiveNot Available2021-11-03Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Cimaterol GC-MS (TBDMS_1_2) - 70eV, PositiveNot Available2021-11-03Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Cimaterol GC-MS (TBDMS_1_3) - 70eV, PositiveNot Available2021-11-03Wishart LabView Spectrum

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Experimental LC-MS/MSLC-MS/MS Spectrum - Cimaterol 30V, Positive-QTOFsplash10-0w29-0790000000-52041ee5567b4b73271d2021-09-20HMDB team, MONAView Spectrum
Experimental LC-MS/MSLC-MS/MS Spectrum - Cimaterol 60V, Positive-QTOFsplash10-01ox-0900000000-7cb55043bf16bd2afedc2021-09-20HMDB team, MONAView Spectrum
Experimental LC-MS/MSLC-MS/MS Spectrum - Cimaterol 45V, Positive-QTOFsplash10-03di-0900000000-6766c220ffbfd33206c22021-09-20HMDB team, MONAView Spectrum
Experimental LC-MS/MSLC-MS/MS Spectrum - Cimaterol 120V, Positive-QTOFsplash10-014r-5900000000-8b2026bb64fc614895692021-09-20HMDB team, MONAView Spectrum
Experimental LC-MS/MSLC-MS/MS Spectrum - Cimaterol 15V, Positive-QTOFsplash10-0udi-0190000000-928e44bb2de5bba686232021-09-20HMDB team, MONAView Spectrum
Experimental LC-MS/MSLC-MS/MS Spectrum - Cimaterol 75V, Positive-QTOFsplash10-00kf-0900000000-a4d357968e9cf3b02e192021-09-20HMDB team, MONAView Spectrum
Experimental LC-MS/MSLC-MS/MS Spectrum - Cimaterol 90V, Positive-QTOFsplash10-014l-0900000000-6a3243479a4f754d0f7a2021-09-20HMDB team, MONAView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Cimaterol 10V, Positive-QTOFsplash10-0uk9-0490000000-f0584ef255a431b551e82016-08-02Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Cimaterol 20V, Positive-QTOFsplash10-0ikl-0920000000-9cbe36cd95305cb30f972016-08-02Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Cimaterol 40V, Positive-QTOFsplash10-03dl-4900000000-9c3fe2f0c24ebcc3d8182016-08-02Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Cimaterol 10V, Negative-QTOFsplash10-014i-1190000000-1b987bdab24b7917c1ba2016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Cimaterol 20V, Negative-QTOFsplash10-0ldi-5590000000-e84ae85eadec75e560b52016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Cimaterol 40V, Negative-QTOFsplash10-0aor-8900000000-17b4a00cad718a943ee82016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Cimaterol 10V, Positive-QTOFsplash10-0uk9-0390000000-2c2b2e44706991a489812021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Cimaterol 20V, Positive-QTOFsplash10-03di-0900000000-b815f5c5941b2612bf742021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Cimaterol 40V, Positive-QTOFsplash10-0bvi-3900000000-5c3f3a73ae8ea316c4172021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Cimaterol 10V, Negative-QTOFsplash10-014i-0090000000-571ca92a58b554034ef42021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Cimaterol 20V, Negative-QTOFsplash10-0aou-3910000000-21d6e822d938a0c6986f2021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Cimaterol 40V, Negative-QTOFsplash10-014i-0900000000-8d5895a10513462f0b882021-10-12Wishart LabView Spectrum
Biological Properties
Cellular LocationsNot Available
Biospecimen Locations
  • Blood
Tissue LocationsNot Available
Pathways
Normal Concentrations
BiospecimenStatusValueAgeSexConditionReferenceDetails
BloodDetected but not QuantifiedNot QuantifiedNot SpecifiedNot SpecifiedNormal details
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDNot Available
KNApSAcK IDNot Available
Chemspider ID2653
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem CompoundNot Available
PDB IDNot Available
ChEBI IDNot Available
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDNot Available
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General References
  1. Barupal DK, Fiehn O: Generating the Blood Exposome Database Using a Comprehensive Text Mining and Database Fusion Approach. Environ Health Perspect. 2019 Sep;127(9):97008. doi: 10.1289/EHP4713. Epub 2019 Sep 26. [PubMed:31557052 ]