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Record Information
Version5.0
StatusDetected but not Quantified
Creation Date2021-09-11 07:44:51 UTC
Update Date2021-09-26 23:02:14 UTC
HMDB IDHMDB0250652
Secondary Accession NumbersNone
Metabolite Identification
Common NameCyclohexanediamine
DescriptionCyclohexanediamine belongs to the class of organic compounds known as aminals. Aminals are compounds having two amino groups bonded to the same carbon, R2C(NR2)2 where R can by a hydrogen or an alkyl group. Based on a literature review a significant number of articles have been published on Cyclohexanediamine. This compound has been identified in human blood as reported by (PMID: 31557052 ). Cyclohexanediamine is not a naturally occurring metabolite and is only found in those individuals exposed to this compound or its derivatives. Technically Cyclohexanediamine is part of the human exposome. The exposome can be defined as the collection of all the exposures of an individual in a lifetime and how those exposures relate to health. An individual's exposure begins before birth and includes insults from environmental and occupational sources.
Structure
Thumb
SynonymsNot Available
Chemical FormulaC6H14N2
Average Molecular Weight114.192
Monoisotopic Molecular Weight114.115698459
IUPAC Namecyclohexane-1,1-diamine
Traditional Namecyclohexane-1,1-diamine
CAS Registry NumberNot Available
SMILES
NC1(N)CCCCC1
InChI Identifier
InChI=1S/C6H14N2/c7-6(8)4-2-1-3-5-6/h1-5,7-8H2
InChI KeyYMHQVDAATAEZLO-UHFFFAOYSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as aminals. Aminals are compounds having two amino groups bonded to the same carbon, R2C(NR2)2 where R can by a hydrogen or an alkyl group.
KingdomOrganic compounds
Super ClassOrganic nitrogen compounds
ClassOrganonitrogen compounds
Sub ClassAminals
Direct ParentAminals
Alternative Parents
Substituents
  • Aminal
  • Hydrocarbon derivative
  • Aliphatic homomonocyclic compound
Molecular FrameworkAliphatic homomonocyclic compounds
External DescriptorsNot Available
Ontology
Physiological effectNot Available
Disposition
ProcessNot Available
RoleNot Available
Physical Properties
StateNot Available
Experimental Molecular Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
logP-0.07ALOGPS
logP0.42ChemAxon
logS-0.28ALOGPS
pKa (Strongest Basic)9.04ChemAxon
Physiological Charge2ChemAxon
Hydrogen Acceptor Count2ChemAxon
Hydrogen Donor Count2ChemAxon
Polar Surface Area52.04 ŲChemAxon
Rotatable Bond Count0ChemAxon
Refractivity34.28 m³·mol⁻¹ChemAxon
Polarizability13.61 ųChemAxon
Number of Rings1ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DeepCCS[M+H]+133.77230932474
DeepCCS[M-H]-131.44530932474
DeepCCS[M-2H]-167.26930932474
DeepCCS[M+Na]+142.41230932474
AllCCS[M+H]+125.332859911
AllCCS[M+H-H2O]+120.532859911
AllCCS[M+NH4]+129.732859911
AllCCS[M+Na]+131.032859911
AllCCS[M-H]-119.832859911
AllCCS[M+Na-2H]-122.332859911
AllCCS[M+HCOO]-125.232859911

Predicted Kovats Retention Indices

Underivatized

MetaboliteSMILESKovats RI ValueColumn TypeReference
CyclohexanediamineNC1(N)CCCCC11528.6Standard polar33892256
CyclohexanediamineNC1(N)CCCCC1966.6Standard non polar33892256
CyclohexanediamineNC1(N)CCCCC11022.6Semi standard non polar33892256

Derivatized

Derivative Name / StructureSMILESKovats RI ValueColumn TypeReference
Cyclohexanediamine,1TMS,isomer #1C[Si](C)(C)NC1(N)CCCCC11218.2Semi standard non polar33892256
Cyclohexanediamine,1TMS,isomer #1C[Si](C)(C)NC1(N)CCCCC11187.4Standard non polar33892256
Cyclohexanediamine,1TMS,isomer #1C[Si](C)(C)NC1(N)CCCCC11894.4Standard polar33892256
Cyclohexanediamine,2TMS,isomer #1C[Si](C)(C)NC1(N[Si](C)(C)C)CCCCC11359.6Semi standard non polar33892256
Cyclohexanediamine,2TMS,isomer #1C[Si](C)(C)NC1(N[Si](C)(C)C)CCCCC11355.3Standard non polar33892256
Cyclohexanediamine,2TMS,isomer #1C[Si](C)(C)NC1(N[Si](C)(C)C)CCCCC11789.1Standard polar33892256
Cyclohexanediamine,2TMS,isomer #2C[Si](C)(C)N(C1(N)CCCCC1)[Si](C)(C)C1421.9Semi standard non polar33892256
Cyclohexanediamine,2TMS,isomer #2C[Si](C)(C)N(C1(N)CCCCC1)[Si](C)(C)C1423.5Standard non polar33892256
Cyclohexanediamine,2TMS,isomer #2C[Si](C)(C)N(C1(N)CCCCC1)[Si](C)(C)C2073.3Standard polar33892256
Cyclohexanediamine,3TMS,isomer #1C[Si](C)(C)NC1(N([Si](C)(C)C)[Si](C)(C)C)CCCCC11552.9Semi standard non polar33892256
Cyclohexanediamine,3TMS,isomer #1C[Si](C)(C)NC1(N([Si](C)(C)C)[Si](C)(C)C)CCCCC11558.9Standard non polar33892256
Cyclohexanediamine,3TMS,isomer #1C[Si](C)(C)NC1(N([Si](C)(C)C)[Si](C)(C)C)CCCCC11803.5Standard polar33892256
Cyclohexanediamine,4TMS,isomer #1C[Si](C)(C)N(C1(N([Si](C)(C)C)[Si](C)(C)C)CCCCC1)[Si](C)(C)C1731.5Semi standard non polar33892256
Cyclohexanediamine,4TMS,isomer #1C[Si](C)(C)N(C1(N([Si](C)(C)C)[Si](C)(C)C)CCCCC1)[Si](C)(C)C1735.4Standard non polar33892256
Cyclohexanediamine,4TMS,isomer #1C[Si](C)(C)N(C1(N([Si](C)(C)C)[Si](C)(C)C)CCCCC1)[Si](C)(C)C1795.0Standard polar33892256
Cyclohexanediamine,1TBDMS,isomer #1CC(C)(C)[Si](C)(C)NC1(N)CCCCC11465.6Semi standard non polar33892256
Cyclohexanediamine,1TBDMS,isomer #1CC(C)(C)[Si](C)(C)NC1(N)CCCCC11384.8Standard non polar33892256
Cyclohexanediamine,1TBDMS,isomer #1CC(C)(C)[Si](C)(C)NC1(N)CCCCC12117.4Standard polar33892256
Cyclohexanediamine,2TBDMS,isomer #1CC(C)(C)[Si](C)(C)NC1(N[Si](C)(C)C(C)(C)C)CCCCC11823.1Semi standard non polar33892256
Cyclohexanediamine,2TBDMS,isomer #1CC(C)(C)[Si](C)(C)NC1(N[Si](C)(C)C(C)(C)C)CCCCC11790.1Standard non polar33892256
Cyclohexanediamine,2TBDMS,isomer #1CC(C)(C)[Si](C)(C)NC1(N[Si](C)(C)C(C)(C)C)CCCCC11982.4Standard polar33892256
Cyclohexanediamine,2TBDMS,isomer #2CC(C)(C)[Si](C)(C)N(C1(N)CCCCC1)[Si](C)(C)C(C)(C)C1844.8Semi standard non polar33892256
Cyclohexanediamine,2TBDMS,isomer #2CC(C)(C)[Si](C)(C)N(C1(N)CCCCC1)[Si](C)(C)C(C)(C)C1813.0Standard non polar33892256
Cyclohexanediamine,2TBDMS,isomer #2CC(C)(C)[Si](C)(C)N(C1(N)CCCCC1)[Si](C)(C)C(C)(C)C2228.4Standard polar33892256
Cyclohexanediamine,3TBDMS,isomer #1CC(C)(C)[Si](C)(C)NC1(N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C)CCCCC12200.0Semi standard non polar33892256
Cyclohexanediamine,3TBDMS,isomer #1CC(C)(C)[Si](C)(C)NC1(N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C)CCCCC12153.0Standard non polar33892256
Cyclohexanediamine,3TBDMS,isomer #1CC(C)(C)[Si](C)(C)NC1(N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C)CCCCC12084.1Standard polar33892256
Cyclohexanediamine,4TBDMS,isomer #1CC(C)(C)[Si](C)(C)N(C1(N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C)CCCCC1)[Si](C)(C)C(C)(C)C2524.1Semi standard non polar33892256
Cyclohexanediamine,4TBDMS,isomer #1CC(C)(C)[Si](C)(C)N(C1(N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C)CCCCC1)[Si](C)(C)C(C)(C)C2445.4Standard non polar33892256
Cyclohexanediamine,4TBDMS,isomer #1CC(C)(C)[Si](C)(C)N(C1(N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C)CCCCC1)[Si](C)(C)C(C)(C)C2135.2Standard polar33892256
Spectra

GC-MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted GC-MSPredicted GC-MS Spectrum - Cyclohexanediamine GC-MS (Non-derivatized) - 70eV, Positivesplash10-06r5-9100000000-a481c471b6b7cc5748ba2021-09-23Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Cyclohexanediamine GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Cyclohexanediamine 10V, Positive-QTOFsplash10-0002-9300000000-9ff96a731f07e08f41a42021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Cyclohexanediamine 20V, Positive-QTOFsplash10-001j-9000000000-78df31ca7a0d9227a4782021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Cyclohexanediamine 40V, Positive-QTOFsplash10-053r-9000000000-ac1a36b0af406f54397d2021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Cyclohexanediamine 10V, Negative-QTOFsplash10-03di-0900000000-3a451b877d85d870bcb02021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Cyclohexanediamine 20V, Negative-QTOFsplash10-03di-0900000000-3a451b877d85d870bcb02021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Cyclohexanediamine 40V, Negative-QTOFsplash10-03di-4900000000-f9de457d3dc2145c8de62021-10-12Wishart LabView Spectrum
Biological Properties
Cellular LocationsNot Available
Biospecimen Locations
  • Blood
Tissue LocationsNot Available
Pathways
Normal Concentrations
BiospecimenStatusValueAgeSexConditionReferenceDetails
BloodDetected but not QuantifiedNot QuantifiedNot SpecifiedNot SpecifiedNormal details
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDNot Available
KNApSAcK IDNot Available
Chemspider ID10467928
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkTrans-1,2-Diaminocyclohexane
METLIN IDNot Available
PubChem Compound17842493
PDB IDNot Available
ChEBI IDNot Available
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDNot Available
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General References
  1. Barupal DK, Fiehn O: Generating the Blood Exposome Database Using a Comprehensive Text Mining and Database Fusion Approach. Environ Health Perspect. 2019 Sep;127(9):97008. doi: 10.1289/EHP4713. Epub 2019 Sep 26. [PubMed:31557052 ]