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Record Information
Version5.0
StatusDetected but not Quantified
Creation Date2021-09-11 08:29:18 UTC
Update Date2021-09-26 23:03:02 UTC
HMDB IDHMDB0251180
Secondary Accession NumbersNone
Metabolite Identification
Common NameDicamba
DescriptionDicamba belongs to the class of organic compounds known as o-methoxybenzoic acids and derivatives. These are benzoic acids in which the hydrogen atom at position 2 of the benzene ring is replaced by a methoxy group. Based on a literature review a significant number of articles have been published on Dicamba. This compound has been identified in human blood as reported by (PMID: 31557052 ). Dicamba is not a naturally occurring metabolite and is only found in those individuals exposed to this compound or its derivatives. Technically Dicamba is part of the human exposome. The exposome can be defined as the collection of all the exposures of an individual in a lifetime and how those exposures relate to health. An individual's exposure begins before birth and includes insults from environmental and occupational sources.
Structure
Thumb
Synonyms
ValueSource
3,6-Dichloro-O-anisic acidChEBI
3,6-Dichloro-O-anisateGenerator
Chemical FormulaC8H6Cl2O3
Average Molecular Weight221.037
Monoisotopic Molecular Weight219.969399472
IUPAC Name3,6-dichloro-2-methoxybenzoic acid
Traditional Namedicamba
CAS Registry NumberNot Available
SMILES
COC1=C(Cl)C=CC(Cl)=C1C(O)=O
InChI Identifier
InChI=1S/C8H6Cl2O3/c1-13-7-5(10)3-2-4(9)6(7)8(11)12/h2-3H,1H3,(H,11,12)
InChI KeyIWEDIXLBFLAXBO-UHFFFAOYSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as o-methoxybenzoic acids and derivatives. These are benzoic acids in which the hydrogen atom at position 2 of the benzene ring is replaced by a methoxy group.
KingdomOrganic compounds
Super ClassBenzenoids
ClassBenzene and substituted derivatives
Sub ClassBenzoic acids and derivatives
Direct ParentO-methoxybenzoic acids and derivatives
Alternative Parents
Substituents
  • 2,5-dichlorobenzoic acid
  • O-methoxybenzoic acid or derivatives
  • 2-halobenzoic acid or derivatives
  • 3-halobenzoic acid or derivatives
  • Halobenzoic acid or derivatives
  • Halobenzoic acid
  • 3-halobenzoic acid
  • 2-halobenzoic acid
  • Benzoic acid
  • Phenoxy compound
  • 1,4-dichlorobenzene
  • Benzoyl
  • Anisole
  • Phenol ether
  • 1-carboxy-2-haloaromatic compound
  • Methoxybenzene
  • Alkyl aryl ether
  • Halobenzene
  • Chlorobenzene
  • Aryl halide
  • Aryl chloride
  • Vinylogous halide
  • Carboxylic acid derivative
  • Carboxylic acid
  • Monocarboxylic acid or derivatives
  • Ether
  • Organohalogen compound
  • Organochloride
  • Organooxygen compound
  • Organic oxygen compound
  • Organic oxide
  • Hydrocarbon derivative
  • Aromatic homomonocyclic compound
Molecular FrameworkAromatic homomonocyclic compounds
External Descriptors
Ontology
Physiological effectNot Available
Disposition
ProcessNot Available
RoleNot Available
Physical Properties
StateNot Available
Experimental Molecular Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
logP2.65ALOGPS
logP2.68ChemAxon
logS-2.7ALOGPS
pKa (Strongest Acidic)2.54ChemAxon
pKa (Strongest Basic)-5ChemAxon
Physiological Charge-1ChemAxon
Hydrogen Acceptor Count3ChemAxon
Hydrogen Donor Count1ChemAxon
Polar Surface Area46.53 ŲChemAxon
Rotatable Bond Count2ChemAxon
Refractivity49.39 m³·mol⁻¹ChemAxon
Polarizability19.06 ųChemAxon
Number of Rings1ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DeepCCS[M+H]+141.28430932474
DeepCCS[M-H]-137.45730932474
DeepCCS[M-2H]-174.81230932474
DeepCCS[M+Na]+150.35130932474
AllCCS[M+H]+142.032859911
AllCCS[M+H-H2O]+138.032859911
AllCCS[M+NH4]+145.832859911
AllCCS[M+Na]+146.932859911
AllCCS[M-H]-134.432859911
AllCCS[M+Na-2H]-135.232859911
AllCCS[M+HCOO]-136.132859911

Predicted Kovats Retention Indices

Underivatized

MetaboliteSMILESKovats RI ValueColumn TypeReference
DicambaCOC1=C(Cl)C=CC(Cl)=C1C(O)=O2516.8Standard polar33892256
DicambaCOC1=C(Cl)C=CC(Cl)=C1C(O)=O1651.2Standard non polar33892256
DicambaCOC1=C(Cl)C=CC(Cl)=C1C(O)=O1697.8Semi standard non polar33892256
Spectra

GC-MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted GC-MSPredicted GC-MS Spectrum - Dicamba GC-MS (Non-derivatized) - 70eV, Positivesplash10-0v59-3980000000-0bd605abc160c90f228d2021-09-24Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Dicamba GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Dicamba GC-MS (TMS_1_1) - 70eV, PositiveNot Available2021-11-03Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Dicamba GC-MS (TBDMS_1_1) - 70eV, PositiveNot Available2021-11-03Wishart LabView Spectrum
MSMass Spectrum (Electron Ionization)splash10-00di-3920000000-436e1d08520e089a01a82014-09-20Not AvailableView Spectrum

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Experimental LC-MS/MSLC-MS/MS Spectrum - Dicamba 45V, Positive-QTOFsplash10-0udi-0090000000-ee3bff58e8450ae6f9782021-09-20HMDB team, MONAView Spectrum
Experimental LC-MS/MSLC-MS/MS Spectrum - Dicamba 15V, Positive-QTOFsplash10-0udi-0090000000-5c965e5300a84ad69dfc2021-09-20HMDB team, MONAView Spectrum
Experimental LC-MS/MSLC-MS/MS Spectrum - Dicamba 35V, Positive-QTOFsplash10-0udi-0090000000-29b0e184b80838ed9bb82021-09-20HMDB team, MONAView Spectrum
Experimental LC-MS/MSLC-MS/MS Spectrum - Dicamba 30V, Positive-QTOFsplash10-0udi-0090000000-647bbcbad7ea630a3dbd2021-09-20HMDB team, MONAView Spectrum
Experimental LC-MS/MSLC-MS/MS Spectrum - Dicamba 15V, Positive-QTOFsplash10-0udi-0090000000-ffc652670cf539c2cf312021-09-20HMDB team, MONAView Spectrum
Experimental LC-MS/MSLC-MS/MS Spectrum - Dicamba 15V, Negative-QTOFsplash10-00di-0900000000-ae422dccfd91dfc1861b2021-09-20HMDB team, MONAView Spectrum
Experimental LC-MS/MSLC-MS/MS Spectrum - Dicamba 45V, Negative-QTOFsplash10-03di-0900000000-ce9e487c39d285dfd3792021-09-20HMDB team, MONAView Spectrum
Experimental LC-MS/MSLC-MS/MS Spectrum - Dicamba 60V, Negative-QTOFsplash10-03di-0900000000-da5ca0735c3a473426d22021-09-20HMDB team, MONAView Spectrum
Experimental LC-MS/MSLC-MS/MS Spectrum - Dicamba 60V, Negative-QTOFsplash10-0udi-0900000000-b366489534e404c106822021-09-20HMDB team, MONAView Spectrum
Experimental LC-MS/MSLC-MS/MS Spectrum - Dicamba 30V, Positive-QTOFsplash10-0udi-0090000000-0293ef662265899d26ff2021-09-20HMDB team, MONAView Spectrum
Experimental LC-MS/MSLC-MS/MS Spectrum - Dicamba 90V, Negative-QTOFsplash10-022i-3900000000-454f9873ef438032c22a2021-09-20HMDB team, MONAView Spectrum
Experimental LC-MS/MSLC-MS/MS Spectrum - Dicamba 75V, Negative-QTOFsplash10-03k9-0900000000-b98d3537cefd0dc56ae82021-09-20HMDB team, MONAView Spectrum
Experimental LC-MS/MSLC-MS/MS Spectrum - Dicamba 35V, Negative-QTOFsplash10-00di-0900000000-28afb95419b0374fa4ae2021-09-20HMDB team, MONAView Spectrum
Experimental LC-MS/MSLC-MS/MS Spectrum - Dicamba 35V, Negative-QTOFsplash10-00di-0900000000-7f60791d1e41822ca9fb2021-09-20HMDB team, MONAView Spectrum
Experimental LC-MS/MSLC-MS/MS Spectrum - Dicamba 60V, Negative-QTOFsplash10-0udi-0900000000-2fd722fcd31d6c9b21392021-09-20HMDB team, MONAView Spectrum
Experimental LC-MS/MSLC-MS/MS Spectrum - Dicamba 15V, Negative-QTOFsplash10-03di-0900000000-7a070b99636431c633a42021-09-20HMDB team, MONAView Spectrum
Experimental LC-MS/MSLC-MS/MS Spectrum - Dicamba 30V, Negative-QTOFsplash10-03di-0900000000-e9b0d6314e8f95d8097f2021-09-20HMDB team, MONAView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Dicamba 10V, Positive-QTOFsplash10-00di-0090000000-01f6e8fade64b8ed834e2016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Dicamba 20V, Positive-QTOFsplash10-00di-0190000000-66f15f3794e55195f1fd2016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Dicamba 40V, Positive-QTOFsplash10-00tg-1920000000-4c9316aab2809e8732af2016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Dicamba 10V, Negative-QTOFsplash10-014i-0290000000-7c34aed41d4faaf91ae72016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Dicamba 20V, Negative-QTOFsplash10-00di-0930000000-d5e61e601e763150a0102016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Dicamba 40V, Negative-QTOFsplash10-00di-1900000000-776d811011123acff4e92016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Dicamba 10V, Positive-QTOFsplash10-0uk9-0090000000-cb49796a90ef01b22f3f2021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Dicamba 20V, Positive-QTOFsplash10-0udi-0090000000-65dccf83cd91040e45042021-10-12Wishart LabView Spectrum

NMR Spectra

Spectrum TypeDescriptionDeposition DateSourceView
Biological Properties
Cellular LocationsNot Available
Biospecimen Locations
  • Blood
Tissue LocationsNot Available
Pathways
Normal Concentrations
BiospecimenStatusValueAgeSexConditionReferenceDetails
BloodDetected but not QuantifiedNot QuantifiedNot SpecifiedNot SpecifiedNormal details
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDNot Available
KNApSAcK IDNot Available
Chemspider ID2922
KEGG Compound IDC18597
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkDicamba
METLIN IDNot Available
PubChem CompoundNot Available
PDB IDNot Available
ChEBI ID81856
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDrw1334041
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General References
  1. Barupal DK, Fiehn O: Generating the Blood Exposome Database Using a Comprehensive Text Mining and Database Fusion Approach. Environ Health Perspect. 2019 Sep;127(9):97008. doi: 10.1289/EHP4713. Epub 2019 Sep 26. [PubMed:31557052 ]